Query 011367
Match_columns 487
No_of_seqs 303 out of 2497
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:40:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011367.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011367hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 4.3E-83 1.5E-87 681.7 55.7 453 1-465 144-604 (605)
2 3d2f_A Heat shock protein homo 100.0 2.3E-81 7.9E-86 673.1 52.5 459 1-467 147-628 (675)
3 2kho_A Heat shock protein 70; 100.0 5.8E-82 2E-86 673.0 46.8 453 1-465 144-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 2.3E-74 7.8E-79 609.0 37.6 405 1-405 148-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.2E-69 4.1E-74 568.6 41.2 388 1-395 118-509 (509)
6 4gni_A Putative heat shock pro 100.0 1.9E-42 6.6E-47 353.8 27.7 235 1-235 159-404 (409)
7 3i33_A Heat shock-related 70 k 100.0 2.9E-42 9.9E-47 352.0 28.9 234 1-234 167-403 (404)
8 3qfu_A 78 kDa glucose-regulate 100.0 1.1E-41 3.9E-46 346.5 29.6 233 1-233 162-394 (394)
9 4e81_A Chaperone protein DNAK; 100.0 4.2E-41 1.4E-45 310.1 26.5 215 244-465 2-216 (219)
10 1dkg_D Molecular chaperone DNA 100.0 4.4E-40 1.5E-44 333.5 26.9 232 1-233 144-383 (383)
11 1u00_A HSC66, chaperone protei 100.0 1.8E-38 6.2E-43 295.5 28.1 215 246-467 1-215 (227)
12 3n8e_A Stress-70 protein, mito 100.0 1.1E-33 3.7E-38 252.0 16.0 165 240-405 17-181 (182)
13 1jce_A ROD shape-determining p 100.0 2E-32 6.9E-37 273.1 16.1 213 1-233 104-327 (344)
14 3h0x_A 78 kDa glucose-regulate 100.0 3E-31 1E-35 230.3 16.8 151 245-395 2-152 (152)
15 3dob_A Heat shock 70 kDa prote 100.0 1.9E-31 6.4E-36 231.2 15.3 151 245-395 2-152 (152)
16 3dqg_A Heat shock 70 kDa prote 100.0 3.5E-31 1.2E-35 229.2 15.1 150 245-395 2-151 (151)
17 2op6_A Heat shock 70 kDa prote 100.0 5E-29 1.7E-33 217.7 15.9 151 245-395 2-152 (152)
18 4a2a_A Cell division protein F 99.9 4.3E-24 1.5E-28 217.0 13.7 197 7-231 169-393 (419)
19 1q5l_A Chaperone protein DNAK; 99.9 2.8E-23 9.5E-28 176.4 13.3 119 240-358 14-132 (135)
20 3h1q_A Ethanolamine utilizatio 99.9 3E-22 1E-26 192.7 16.2 171 2-229 102-272 (272)
21 2ych_A Competence protein PILM 99.9 4.9E-23 1.7E-27 207.7 9.8 199 7-230 152-373 (377)
22 2fsj_A Hypothetical protein TA 99.9 8E-23 2.7E-27 203.2 10.6 192 2-230 131-343 (346)
23 1k8k_A ARP3, actin-like protei 99.8 2.9E-20 1E-24 190.0 11.2 218 1-231 116-387 (418)
24 2fxu_A Alpha-actin-1, actin, a 99.8 9.8E-20 3.4E-24 183.2 10.4 207 1-231 109-349 (375)
25 2zgy_A Plasmid segregation pro 99.8 8.7E-19 3E-23 172.5 8.9 181 16-229 136-319 (320)
26 4ehu_A Activator of 2-hydroxyi 99.6 7.8E-14 2.7E-18 134.1 16.7 176 21-232 72-255 (276)
27 3js6_A Uncharacterized PARM pr 99.5 6E-15 2E-19 146.5 7.3 189 7-233 128-338 (355)
28 3lof_A Heat shock 70 kDa prote 99.5 1.6E-13 5.4E-18 112.9 11.2 84 383-467 3-86 (113)
29 1k8k_B ARP2, actin-like protei 99.5 1.7E-14 5.7E-19 145.8 4.9 206 2-231 114-364 (394)
30 4apw_A ALP12; actin-like prote 99.5 6.4E-14 2.2E-18 137.9 7.4 174 22-231 151-324 (329)
31 2p32_A Heat shock 70 kDa prote 99.3 1.7E-12 5.9E-17 107.8 8.2 89 384-473 13-101 (120)
32 1nbw_A Glycerol dehydratase re 99.3 5.7E-13 1.9E-17 134.4 4.9 190 11-229 375-604 (607)
33 2d0o_A DIOL dehydratase-reacti 99.3 9.8E-12 3.4E-16 125.0 13.6 193 9-230 371-603 (610)
34 1ud0_A HSC70, 70 kDa heat-shoc 99.2 7.2E-12 2.5E-16 103.1 6.5 85 387-472 2-86 (113)
35 3dwl_A Actin-related protein 3 99.0 2.1E-10 7.1E-15 116.4 4.1 212 3-230 134-395 (427)
36 3qb0_A Actin-related protein 4 98.6 5.2E-08 1.8E-12 100.0 7.4 83 4-95 126-209 (498)
37 1hux_A Activator of (R)-2-hydr 98.4 4.6E-06 1.6E-10 79.2 15.0 73 155-232 185-257 (270)
38 4fo0_A Actin-related protein 8 98.1 5.8E-05 2E-09 80.0 17.1 85 2-95 208-293 (593)
39 2ews_A Pantothenate kinase; PA 97.6 0.00072 2.5E-08 64.1 13.7 76 149-229 207-286 (287)
40 2i7n_A Pantothenate kinase 1; 97.3 0.0018 6.2E-08 63.1 12.1 70 155-229 279-358 (360)
41 4am6_A Actin-like protein ARP8 97.2 0.00049 1.7E-08 71.7 6.9 114 2-129 231-346 (655)
42 2itm_A Xylulose kinase, xylulo 96.2 0.0046 1.6E-07 63.6 5.9 77 157-234 361-437 (484)
43 3l0q_A Xylulose kinase; xlylul 96.2 0.006 2.1E-07 63.8 6.8 85 148-234 408-492 (554)
44 4bc3_A Xylulose kinase; transf 96.1 0.0079 2.7E-07 62.7 7.3 76 155-232 407-482 (538)
45 3hz6_A Xylulokinase; xylulose, 96.1 0.0075 2.6E-07 62.4 7.0 76 156-235 378-454 (511)
46 2zf5_O Glycerol kinase; hypert 96.1 0.0071 2.4E-07 62.4 6.7 76 156-234 368-443 (497)
47 3ll3_A Gluconate kinase; xylul 95.9 0.0097 3.3E-07 61.5 6.6 80 150-234 364-443 (504)
48 3i8b_A Xylulose kinase; strain 95.8 0.0084 2.9E-07 62.1 5.8 77 150-234 395-474 (515)
49 3mdq_A Exopolyphosphatase; str 95.8 0.22 7.5E-06 47.8 15.2 77 8-89 92-170 (315)
50 3jvp_A Ribulokinase; PSI-II, N 95.5 0.011 3.8E-07 62.0 5.2 80 150-234 410-490 (572)
51 3ifr_A Carbohydrate kinase, FG 95.5 0.0089 3E-07 61.8 4.4 77 150-234 371-450 (508)
52 3g25_A Glycerol kinase; IDP007 95.5 0.011 3.8E-07 61.0 5.0 81 150-235 374-455 (501)
53 2dpn_A Glycerol kinase; thermu 95.5 0.019 6.4E-07 59.1 6.8 75 157-233 372-447 (495)
54 1t6c_A Exopolyphosphatase; alp 95.5 0.046 1.6E-06 52.6 9.1 77 8-89 100-177 (315)
55 4e1j_A Glycerol kinase; struct 95.2 0.012 4E-07 61.1 4.3 52 182-235 425-476 (520)
56 3h3n_X Glycerol kinase; ATP-bi 95.2 0.014 4.9E-07 60.2 4.9 53 181-235 402-454 (506)
57 2p3r_A Glycerol kinase; glycer 95.2 0.012 4.2E-07 60.8 4.3 81 150-235 371-452 (510)
58 3ezw_A Glycerol kinase; glycer 95.0 0.029 9.9E-07 58.2 6.5 53 181-235 401-453 (526)
59 2d4w_A Glycerol kinase; alpha 94.9 0.021 7E-07 59.0 5.0 51 182-234 403-453 (504)
60 2w40_A Glycerol kinase, putati 94.9 0.019 6.4E-07 59.3 4.7 51 182-234 406-457 (503)
61 2uyt_A Rhamnulokinase; rhamnos 94.5 0.033 1.1E-06 57.2 5.2 48 181-231 392-439 (489)
62 2ivn_A O-sialoglycoprotein end 93.0 2.2 7.6E-05 41.0 15.0 65 162-231 229-298 (330)
63 3h6e_A Carbohydrate kinase, FG 92.1 0.16 5.5E-06 51.9 5.8 71 155-231 362-435 (482)
64 3cer_A Possible exopolyphospha 90.7 0.28 9.5E-06 47.7 5.6 78 8-89 105-191 (343)
65 1u6z_A Exopolyphosphatase; alp 89.2 0.66 2.3E-05 47.7 7.2 75 9-89 100-176 (513)
66 3hi0_A Putative exopolyphospha 88.9 0.48 1.6E-05 48.6 6.0 75 8-88 103-178 (508)
67 3qbx_A Anhydro-N-acetylmuramic 86.2 1.7 5.9E-05 42.2 7.7 73 156-231 260-336 (371)
68 3eno_A Putative O-sialoglycopr 81.6 2.5 8.5E-05 40.7 6.7 68 161-233 233-305 (334)
69 3cqy_A Anhydro-N-acetylmuramic 81.2 3 0.0001 40.5 7.0 71 155-231 266-342 (370)
70 3vth_A Hydrogenase maturation 80.4 1.9 6.5E-05 46.3 5.8 52 182-233 693-749 (761)
71 3en9_A Glycoprotease, O-sialog 80.2 33 0.0011 35.1 15.1 42 161-207 232-273 (540)
72 3ttc_A HYPF, transcriptional r 79.8 3.1 0.00011 43.8 7.0 50 182-231 599-651 (657)
73 2e2o_A Hexokinase; acetate and 78.9 2.3 7.9E-05 40.0 5.4 49 182-231 239-287 (299)
74 4g9i_A Hydrogenase maturation 78.8 3.7 0.00013 44.2 7.4 61 166-231 694-759 (772)
75 3aap_A Ectonucleoside triphosp 78.3 3.4 0.00012 40.0 6.5 56 7-63 88-158 (353)
76 2gup_A ROK family protein; sug 72.0 9.1 0.00031 35.6 7.6 50 182-231 227-287 (292)
77 3ven_A O-carbamoyltransferase 71.3 8.7 0.0003 39.7 7.6 69 162-235 292-361 (576)
78 3cj1_A Ectonucleoside triphosp 70.0 9.1 0.00031 38.4 7.3 57 7-63 130-208 (456)
79 3cet_A Conserved archaeal prot 69.9 3.4 0.00012 39.4 3.9 71 150-228 244-321 (334)
80 3r8e_A Hypothetical sugar kina 69.8 8.8 0.0003 36.4 7.0 70 160-230 239-318 (321)
81 4db3_A Glcnac kinase, N-acetyl 66.9 9.6 0.00033 36.3 6.6 68 161-229 249-324 (327)
82 2qm1_A Glucokinase; alpha-beta 65.2 14 0.00047 34.9 7.3 50 182-231 262-321 (326)
83 4htl_A Beta-glucoside kinase; 64.4 11 0.00037 35.3 6.3 50 182-231 237-291 (297)
84 2zqm_A Prefoldin beta subunit 58.7 61 0.0021 25.2 9.0 55 414-472 62-116 (117)
85 2aa4_A Mannac kinase, putative 58.6 9.7 0.00033 35.3 4.8 48 182-229 233-286 (289)
86 3vgl_A Glucokinase; ROK family 57.1 21 0.00072 33.7 7.0 43 18-62 96-139 (321)
87 1zc6_A Probable N-acetylglucos 57.0 7.3 0.00025 36.6 3.6 64 157-230 227-292 (305)
88 3o8m_A Hexokinase; rnaseh-like 55.5 39 0.0014 34.0 8.8 25 43-67 78-102 (485)
89 3zx3_A Ectonucleoside triphosp 55.3 22 0.00077 35.5 7.0 57 7-63 130-199 (452)
90 3vov_A Glucokinase, hexokinase 55.1 25 0.00085 32.9 7.1 49 182-230 237-294 (302)
91 3htv_A D-allose kinase, alloki 54.8 26 0.0009 32.9 7.2 50 181-230 238-298 (310)
92 1zbs_A Hypothetical protein PG 53.2 4.6 0.00016 37.8 1.5 67 157-231 211-280 (291)
93 1saz_A Probable butyrate kinas 52.9 10 0.00034 37.1 3.9 50 181-230 294-347 (381)
94 2yhx_A Hexokinase B; transfera 51.2 67 0.0023 32.1 9.8 26 43-68 59-84 (457)
95 4ijn_A Acetate kinase, acetoki 49.9 1.5E+02 0.0051 28.9 11.5 57 157-219 302-359 (398)
96 2hoe_A N-acetylglucosamine kin 46.4 36 0.0012 32.9 6.9 51 44-94 86-136 (380)
97 3zyy_X Iron-sulfur cluster bin 46.2 39 0.0013 35.2 7.2 62 146-208 499-561 (631)
98 2ap1_A Putative regulator prot 45.3 12 0.00041 35.5 3.1 47 182-229 269-324 (327)
99 3khy_A Propionate kinase; csgi 44.5 2E+02 0.0069 27.7 11.4 25 182-206 313-338 (384)
100 4am6_A Actin-like protein ARP8 44.4 10 0.00035 39.6 2.5 25 183-207 501-525 (655)
101 3epq_A Putative fructokinase; 43.6 37 0.0013 31.7 6.2 50 181-230 223-288 (302)
102 1hnj_A Beta-ketoacyl-acyl carr 43.5 30 0.001 32.4 5.6 49 156-207 211-259 (317)
103 1zxo_A Conserved hypothetical 41.6 4.9 0.00017 37.6 -0.3 67 160-231 212-278 (291)
104 3f9m_A Glucokinase; hexokinase 41.4 72 0.0025 31.9 8.1 24 44-67 76-99 (470)
105 3zyy_X Iron-sulfur cluster bin 38.9 1E+02 0.0035 32.1 9.0 97 46-198 207-305 (631)
106 2ch5_A NAGK protein; transfera 37.8 16 0.00056 34.7 2.8 72 158-231 234-324 (347)
107 2yhw_A Bifunctional UDP-N-acet 37.6 68 0.0023 30.3 7.2 43 18-62 131-174 (343)
108 4fla_A Regulation of nuclear P 37.6 90 0.0031 25.9 6.8 46 419-464 97-145 (152)
109 2ebd_A 3-oxoacyl-[acyl-carrier 36.1 44 0.0015 31.0 5.5 45 159-206 206-250 (309)
110 2e1z_A Propionate kinase; TDCD 35.7 3.2E+02 0.011 26.7 13.8 44 159-206 311-355 (415)
111 2q2r_A Glucokinase 1, putative 34.7 33 0.0011 33.1 4.4 18 18-35 127-144 (373)
112 3nq4_A 6,7-dimethyl-8-ribityll 32.8 46 0.0016 27.8 4.3 60 160-229 25-85 (156)
113 2a01_A Apolipoprotein A-I; fou 32.7 39 0.0013 30.5 4.3 75 387-461 134-212 (243)
114 1bdg_A Hexokinase; phosphotran 32.4 1.4E+02 0.0049 29.5 8.7 23 44-66 67-89 (451)
115 1ub7_A 3-oxoacyl-[acyl-carrier 32.3 37 0.0013 31.8 4.3 47 157-206 214-260 (322)
116 1z6r_A MLC protein; transcript 31.7 48 0.0016 32.3 5.1 49 182-230 334-392 (406)
117 1zow_A 3-oxoacyl-[acyl-carrier 31.6 41 0.0014 31.3 4.4 47 157-206 206-252 (313)
118 2x3e_A 3-oxoacyl-[acyl-carrier 31.1 43 0.0015 31.6 4.5 47 157-206 218-264 (331)
119 2ra1_A Surface layer protein; 30.5 1.5E+02 0.0052 28.5 7.9 69 390-459 160-228 (412)
120 1mzj_A Beta-ketoacylsynthase I 30.4 39 0.0013 32.0 4.1 47 157-206 225-271 (339)
121 3fcg_A F1 capsule-anchoring pr 30.4 1.6E+02 0.0056 22.0 6.6 55 290-358 27-81 (90)
122 1z05_A Transcriptional regulat 30.1 58 0.002 32.0 5.4 48 182-230 357-414 (429)
123 3hm8_A Hexokinase-3; glucose, 29.8 1.5E+02 0.0053 29.3 8.3 30 43-73 57-86 (445)
124 3r9p_A ACKA; ssgcid, seattle s 29.3 4E+02 0.014 25.8 11.7 147 30-206 180-339 (391)
125 3lay_A Zinc resistance-associa 29.1 2.6E+02 0.009 23.6 10.2 66 360-436 66-131 (175)
126 2qm1_A Glucokinase; alpha-beta 27.5 1.6E+02 0.0053 27.3 7.8 25 45-69 6-30 (326)
127 1g99_A Acetate kinase; alpha/b 27.0 71 0.0024 31.3 5.1 46 157-206 301-347 (408)
128 3eno_A Putative O-sialoglycopr 26.7 1.1E+02 0.0038 28.9 6.5 43 160-202 51-93 (334)
129 3qvl_A Putative hydantoin race 26.2 83 0.0028 28.3 5.3 53 163-226 160-212 (245)
130 3sk3_A Acetate kinase, acetoki 25.9 1.9E+02 0.0066 28.3 8.0 152 30-206 204-364 (415)
131 1u6e_A 3-oxoacyl-[acyl-carrier 25.7 56 0.0019 30.7 4.2 45 159-206 228-272 (335)
132 2gel_A Putative GRAM negative 25.2 93 0.0032 27.7 5.4 38 163-200 36-73 (231)
133 1zc6_A Probable N-acetylglucos 24.8 1.9E+02 0.0064 26.6 7.7 24 45-68 11-34 (305)
134 3cer_A Possible exopolyphospha 24.3 4.5E+02 0.015 24.7 10.4 68 44-128 15-84 (343)
135 2ivn_A O-sialoglycoprotein end 24.1 1.2E+02 0.004 28.7 6.1 67 159-227 45-117 (330)
136 3lwd_A 6-phosphogluconolactona 22.8 1.3E+02 0.0044 26.7 5.8 47 153-204 9-55 (226)
137 2ap1_A Putative regulator prot 22.7 2.4E+02 0.0083 26.1 8.1 26 44-69 23-48 (327)
138 1t6c_A Exopolyphosphatase; alp 22.6 3.5E+02 0.012 25.1 9.1 31 44-74 11-41 (315)
139 3r6m_A YEAZ, resuscitation pro 22.5 84 0.0029 27.7 4.4 64 163-226 37-104 (213)
140 1ted_A PKS18; thiolase fold, s 22.5 55 0.0019 31.8 3.5 46 158-206 282-327 (393)
141 2a6a_A Hypothetical protein TM 22.4 96 0.0033 27.4 4.8 41 162-202 46-86 (218)
142 1sz2_A Glucokinase, glucose ki 22.0 90 0.0031 29.3 4.9 46 17-63 100-156 (332)
143 3nwp_A 6-phosphogluconolactona 21.9 1.4E+02 0.005 26.5 6.0 46 155-205 15-60 (233)
144 3ist_A Glutamate racemase; str 21.5 77 0.0026 29.1 4.1 45 180-228 176-220 (269)
145 1cza_N Hexokinase type I; stru 21.3 2.1E+02 0.0071 31.4 8.1 25 43-67 524-548 (917)
146 4dfe_A 3-oxoacyl-[acyl-carrier 21.2 82 0.0028 29.7 4.4 47 157-206 228-274 (333)
147 2kp6_A Uncharacterized protein 20.5 62 0.0021 23.8 2.5 15 2-16 47-61 (82)
148 3lhi_A Putative 6-phosphogluco 20.4 1.5E+02 0.0052 26.3 5.8 45 155-204 12-56 (232)
149 1nfn_A Apolipoprotein E3; lipi 20.4 3.8E+02 0.013 22.9 8.1 23 385-407 106-128 (191)
150 3tso_C RAB11 family-interactin 20.4 2.4E+02 0.0083 20.1 6.0 41 360-406 12-52 (75)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.3e-83 Score=681.71 Aligned_cols=453 Identities=51% Similarity=0.819 Sum_probs=432.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeC----CeEEEEEecC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDN----GVFEVLSTNG 76 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~----~~~~v~~~~~ 76 (487)
.||++.||++|++||++|||+++++++||+|||++|++.....+.++||||+||||||+|++++.+ +.++++++.|
T Consensus 144 a~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~g 223 (605)
T 4b9q_A 144 AYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNG 223 (605)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecC
Confidence 599999999999999999999999999999999999987765678999999999999999999988 8999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCC----ceeEEEecHH
Q 011367 77 DTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDG----IDFSEPLTRA 152 (487)
Q Consensus 77 ~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~ 152 (487)
+.++||.+||++|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|||+
T Consensus 224 d~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~ 303 (605)
T 4b9q_A 224 DTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (605)
T ss_dssp ETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHH
T ss_pred CCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHH
Confidence 999999999999999999999999999999999999999999999999999999988888765543 6788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 153 RFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
+|++++.|+++++..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.| +..+..+.||++|||+|||++|+.+
T Consensus 304 ~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l 382 (605)
T 4b9q_A 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (605)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 6788899999999999999999999
Q ss_pred cCCCCCCccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEE
Q 011367 233 SGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFD 312 (487)
Q Consensus 233 s~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 312 (487)
++. .+++.+.|++|++||+++.+|.|.++||+|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.
T Consensus 383 ~~~----~~~~~l~dv~p~slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~ 458 (605)
T 4b9q_A 383 TGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN 458 (605)
T ss_dssp HTS----SCSEEEECBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred cCC----CCceEEEeeeeeEEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEE
Confidence 876 5689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhh
Q 011367 313 LSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARN 392 (487)
Q Consensus 313 l~~i~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N 392 (487)
|.|+||.|.|.++|+|+|++|.||+|+|++.+..||++.+++|+.. ..||+++|++|+++++++..+|++.+++.+++|
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n 537 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKCEELVQTRN 537 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999887 689999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 011367 393 SLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 465 (487)
Q Consensus 393 ~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~ 465 (487)
+||+|+|.+++.+.+ +..++++++++.+...++++++||+.+ +.++|++++++|++.+.||..++++
T Consensus 538 ~~e~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 538 QGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHh---hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999974 788999999999999999999999986 5899999999999999999999875
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.3e-81 Score=673.05 Aligned_cols=459 Identities=27% Similarity=0.445 Sum_probs=427.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccC------CCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEe
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK------GGEKNILVFDLGGGTFDVSILTIDNGVFEVLST 74 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~------~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~ 74 (487)
.||++.||+++++||++||+++++|++||+|||++|++... ..+.++||||+||||||+|++++.++.++|+++
T Consensus 147 a~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~ 226 (675)
T 3d2f_A 147 PWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGT 226 (675)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEE
Confidence 59999999999999999999999999999999999987552 246789999999999999999999999999999
Q ss_pred cCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHH
Q 011367 75 NGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARF 154 (487)
Q Consensus 75 ~~~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~f 154 (487)
.|+.++||++||++|++|+.++|+.++++++..+++++.+|+.+||++|+.||....+.+.++.++++.++.+.|||++|
T Consensus 227 ~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~f 306 (675)
T 3d2f_A 227 ACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREEL 306 (675)
T ss_dssp EEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHH
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHH
Confidence 99999999999999999999999999999998999999999999999999999998889999988888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
+++|.|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|++.|++.| +..+..+.||++|||+|||++|+.+++
T Consensus 307 e~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls~ 385 (675)
T 3d2f_A 307 EELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHSP 385 (675)
T ss_dssp HHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999 577888999999999999999999998
Q ss_pred CCCCCccceEEEeeccccCceeeeCc----eeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccc-cCccee
Q 011367 235 EGGDETKDILLLDVAPLTLGIETVGG----VMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTK-DCRLLG 309 (487)
Q Consensus 235 ~~~~~~~~~~~~d~~~~s~gi~~~~~----~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~-~~~~lg 309 (487)
. ++++++.+.|++|++||+++.++ .+.++||+|++||++++.+|++..+++ +.+. |+|++..+. +|..||
T Consensus 386 ~--~~v~~~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~--~~~~-~~ge~~~~~~~n~~lg 460 (675)
T 3d2f_A 386 T--LRVRPFKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS--MAAS-YTDITQLPPNTPEQIA 460 (675)
T ss_dssp S--CCCCCCEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE--EEEE-ESCGGGSCTTCCSEEE
T ss_pred C--CcccceEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce--EEEE-EcCCcccccccCceee
Confidence 6 45788999999999999999876 499999999999999999999876653 3332 779988887 899999
Q ss_pred EEEecCCCCCCCCCC-eEEEEEEEeCCccEEEEEE----------ecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHH
Q 011367 310 KFDLSGIPPAPRGTP-QIEVTFEVDANGILNVKAE----------DKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFA 378 (487)
Q Consensus 310 ~~~l~~i~~~~~g~~-~i~v~f~id~~g~l~v~~~----------~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~ 378 (487)
+|.|.|+||.|.|.+ +|+|+|++|.||+|+|++. ++.+|+..+++|+....+||+++|++++++++++.
T Consensus 461 ~f~l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~ 540 (675)
T 3d2f_A 461 NWEITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEML 540 (675)
T ss_dssp EEEEECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHH
T ss_pred EEEecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 999999999999985 9999999999999999995 68889999999998756899999999999999999
Q ss_pred HhchhhHhHHHHhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHH
Q 011367 379 EEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDN-QSAEKEDYEEKLKEVEAVCN 457 (487)
Q Consensus 379 ~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~-~~a~~e~~~~kl~eL~~~~~ 457 (487)
.+|+..+++.+++|+||+|+|.+|+.|.+ .+..++++++++++...++++++||+++ .+++.++|++|+++|++++.
T Consensus 541 ~~D~~~~~~~~~~n~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~ 618 (675)
T 3d2f_A 541 AQDKLVAETEDRKNTLEEYIYTLRGKLEE--EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGN 618 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999976 3888999999999999999999999875 57899999999999999999
Q ss_pred HHHHHHHhhc
Q 011367 458 PIITAVYQRS 467 (487)
Q Consensus 458 pi~~r~~~~~ 467 (487)
||..|+++..
T Consensus 619 ~i~~r~~e~~ 628 (675)
T 3d2f_A 619 IIRGRYLAKE 628 (675)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988873
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=5.8e-82 Score=673.00 Aligned_cols=453 Identities=51% Similarity=0.825 Sum_probs=429.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEe----CCeEEEEEecC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNG 76 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~v~~~~~ 76 (487)
.||++.||+++++|+++||+++++|++||+|||++|++.....+.++||||+||||||+|++++. ++.++++++.|
T Consensus 144 a~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~g 223 (605)
T 2kho_A 144 AYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNG 223 (605)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECC
Confidence 59999999999999999999999999999999999998765357899999999999999999998 78999999999
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccC---C-ceeEEEecHH
Q 011367 77 DTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRA 152 (487)
Q Consensus 77 ~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~---~-~~~~~~itr~ 152 (487)
+.++||.+||++|++|+.++|+++++.++..+++++.+|+.+||++|+.||....+.+.++.+.+ | .++.++|||+
T Consensus 224 d~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~ 303 (605)
T 2kho_A 224 DTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (605)
T ss_dssp ESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHH
Confidence 99999999999999999999999999999889999999999999999999999988888886654 2 5677899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 153 RFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
+|+++|+|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|++.|++.| +..+..+.||++|||+|||++|+.+
T Consensus 304 ~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l 382 (605)
T 2kho_A 304 KLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (605)
T ss_dssp HHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 5778889999999999999999998
Q ss_pred cCCCCCCccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEE
Q 011367 233 SGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFD 312 (487)
Q Consensus 233 s~~~~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 312 (487)
++. .+++.+.|++|++||+++.+|.|.++||+|++||++++.+|++..|+|+.+.|.+|+|++..+.+|..||+|.
T Consensus 383 ~~~----~~~~~l~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~ 458 (605)
T 2kho_A 383 TGD----VKDVLLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFN 458 (605)
T ss_dssp TTS----CCCCCCSBCCCCCEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEE
T ss_pred cCC----ccCceEEeeeeeeccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEE
Confidence 875 5678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhh
Q 011367 313 LSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARN 392 (487)
Q Consensus 313 l~~i~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N 392 (487)
|.++||.|.|.++|+|+|++|.||+|+|++.+..+|+..+++|+.+ ..||++++++++++++++..+|+..+++.+++|
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n 537 (605)
T 2kho_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRN 537 (605)
T ss_dssp EECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988 889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 011367 393 SLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 465 (487)
Q Consensus 393 ~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~ 465 (487)
+||+|+|.+++.|.+ +..++++++++++...++++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 538 ~~e~~~~~~~~~l~~---~~~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 538 QGDHLLHSTRKQVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHH---HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh---hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999965 788999999999999999999999964 7999999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2.3e-74 Score=608.97 Aligned_cols=405 Identities=68% Similarity=1.042 Sum_probs=385.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCC-CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTH 79 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~-~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 79 (487)
.||++.||+++++|++.||+++++|++||+|||++|++.... .+.++||||+||||||++++++.++.++++++.|+.+
T Consensus 148 a~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~ 227 (554)
T 1yuw_A 148 AYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTH 227 (554)
T ss_dssp TTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCC
Confidence 589999999999999999999999999999999999887643 4689999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHH
Q 011367 80 LGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNN 159 (487)
Q Consensus 80 lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~ 159 (487)
+||.+||++|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+++|.++...|+|++|++++.
T Consensus 228 lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~ 307 (554)
T 1yuw_A 228 LGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNA 307 (554)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHH
Confidence 99999999999999999999999998889999999999999999999999999999998888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCCCCCC
Q 011367 160 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDE 239 (487)
Q Consensus 160 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~~~~~ 239 (487)
|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++
T Consensus 308 ~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~ 387 (554)
T 1yuw_A 308 DLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSEN 387 (554)
T ss_dssp HHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCcccc
Confidence 99999999999999999999999999999999999999999999999767888899999999999999999988753345
Q ss_pred ccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCC
Q 011367 240 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 319 (487)
Q Consensus 240 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 319 (487)
.+++.+.|++|++||+++.+|.|.++||+|++||++++.+|++..|+|+.+.|.+|+|++....+|..||+|.|.++||.
T Consensus 388 ~~~~~~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~ 467 (554)
T 1yuw_A 388 VQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPA 467 (554)
T ss_dssp TTSSCCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCC
T ss_pred ccceEEEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHH
Q 011367 320 PRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVY 399 (487)
Q Consensus 320 ~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy 399 (487)
|.|.++|+|+|++|.||+|+|++.+..+|+..+++|+.+.++||++++++++++++++..+|++.+++.+++|+||+|+|
T Consensus 468 ~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~ 547 (554)
T 1yuw_A 468 PRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAF 547 (554)
T ss_dssp STTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCS
T ss_pred cccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877899999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 011367 400 NMKNQI 405 (487)
Q Consensus 400 ~~r~~l 405 (487)
.+|+.|
T Consensus 548 ~~~~~l 553 (554)
T 1yuw_A 548 NMKATV 553 (554)
T ss_dssp CSCCCC
T ss_pred HHHHhh
Confidence 988765
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.2e-69 Score=568.57 Aligned_cols=388 Identities=59% Similarity=0.944 Sum_probs=363.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
.||++.||++|++|++.||++++++++||+|||++|++... .+.++||||+||||||++++++.++.++++++.|+.++
T Consensus 118 a~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~-~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~l 196 (509)
T 2v7y_A 118 AYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE-EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHL 196 (509)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS-CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC-CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCc
Confidence 48999999999999999999999999999999999998764 47899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccC---C-ceeEEEecHHHHHH
Q 011367 81 GGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRARFEE 156 (487)
Q Consensus 81 GG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~---~-~~~~~~itr~~fe~ 156 (487)
||.+||+.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+.+ | .++.+.|+|++|++
T Consensus 197 GG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~ 276 (509)
T 2v7y_A 197 GGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEE 276 (509)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHH
Confidence 9999999999999999999999988889999999999999999999999888888876654 2 46778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCCC
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGEG 236 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~~ 236 (487)
+++|+++++..+|+++|+.+++.+.+|+.|+||||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++.
T Consensus 277 l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~- 354 (509)
T 2v7y_A 277 LSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE- 354 (509)
T ss_dssp HTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC-
Confidence 99999999999999999999999899999999999999999999999999 5678889999999999999999998875
Q ss_pred CCCccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCC
Q 011367 237 GDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGI 316 (487)
Q Consensus 237 ~~~~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i 316 (487)
.+++.+.|++|++||+++.++.|.++||+|+++|++++.+|++..|+|+.+.|.+|+|++....+|..||+|.|.++
T Consensus 355 ---~~~~~~~dv~p~slgi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i 431 (509)
T 2v7y_A 355 ---VKDVVLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGI 431 (509)
T ss_dssp ---CCCCCCCCBCSSEEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECC
T ss_pred ---ccCceEEEeeccccceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHH
Q 011367 317 PPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395 (487)
Q Consensus 317 ~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 395 (487)
||.|.|.++|+|+|++|.||+|+|++.+..+|+..+++|+.+ ..||++++++++++++++..+|+..+++.+++|+||
T Consensus 432 ~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 432 PPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp CCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred CCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999988 789999999999999999999999999999999986
No 6
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.9e-42 Score=353.80 Aligned_cols=235 Identities=32% Similarity=0.509 Sum_probs=218.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhcccc--CCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDK--KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDT 78 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~--~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 78 (487)
.||++.||++|++|++.||++++.+++||+|||++|+... ...+..+||||+||||||++++++.++.+++++..++.
T Consensus 159 a~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~ 238 (409)
T 4gni_A 159 TNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDY 238 (409)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEES
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCC
Confidence 4899999999999999999999999999999999998764 23578999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHHHHHHhcC--CCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHH
Q 011367 79 HLGGEDFDQRVMEYFIKLIKKKHG--KDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEE 156 (487)
Q Consensus 79 ~lGG~~id~~l~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~ 156 (487)
.+||.+||+.|++++.++|..+++ .++..+++.+.+|+.+||++|+.||....+.+.++.+.++.++.+.|||++|++
T Consensus 239 ~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~ 318 (409)
T 4gni_A 239 EYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYET 318 (409)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHH
Confidence 999999999999999999999998 788889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCC-CC------CCCCCchhHHhhhhhhhh
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK-EP------NKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~-~~------~~~~~p~~aVa~GAa~~a 229 (487)
+++|+++++..+|+++|+.+++...+|+.|+||||+|++|+|++.|++.|+.. ++ ..+.||++|||+|||++|
T Consensus 319 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~ 398 (409)
T 4gni_A 319 IARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQA 398 (409)
T ss_dssp HTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999644 33 678999999999999999
Q ss_pred hhccCC
Q 011367 230 GILSGE 235 (487)
Q Consensus 230 ~~~s~~ 235 (487)
+.....
T Consensus 399 ~~~~~~ 404 (409)
T 4gni_A 399 SLIQEH 404 (409)
T ss_dssp HHHHC-
T ss_pred hhhhhh
Confidence 876544
No 7
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=2.9e-42 Score=352.03 Aligned_cols=234 Identities=68% Similarity=1.043 Sum_probs=222.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCC---CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG---GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGD 77 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~---~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~ 77 (487)
.||++.||+++++|++.||++++.+++||+|||++|+..... .+..+||||+||||||++++++.++.+++++..++
T Consensus 167 a~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~ 246 (404)
T 3i33_A 167 AYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 246 (404)
T ss_dssp TTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCC
Confidence 489999999999999999999999999999999999877652 47889999999999999999999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHH
Q 011367 78 THLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEEL 157 (487)
Q Consensus 78 ~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~ 157 (487)
..+||.+||+.|++++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|+++
T Consensus 247 ~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~ 326 (404)
T 3i33_A 247 THLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEEL 326 (404)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHH
Confidence 99999999999999999999999999998899999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 158 NNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 158 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
++|+++++..+|.++|+.+++...+|+.|+||||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 327 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 327 NADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp THHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999998788888999999999999999998875
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=1.1e-41 Score=346.49 Aligned_cols=233 Identities=69% Similarity=1.061 Sum_probs=222.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
.||++.||+++++|++.||++++.+++||+|||++|++.....+.++||||+||||||++++++.++.+++++..++.++
T Consensus 162 ~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~l 241 (394)
T 3qfu_A 162 AYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHL 241 (394)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTC
T ss_pred CCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCC
Confidence 48999999999999999999999999999999999988776567899999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHH
Q 011367 81 GGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNND 160 (487)
Q Consensus 81 GG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~ 160 (487)
||.+||+.|++++.++|+.+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.|+|++|++++++
T Consensus 242 GG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~ 321 (394)
T 3qfu_A 242 GGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLD 321 (394)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999988899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhcc
Q 011367 161 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233 (487)
Q Consensus 161 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s 233 (487)
+++++..+|.++|+.+++...+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.++
T Consensus 322 ~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 322 LFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999899999999999999999999999999878888899999999999999998764
No 9
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=4.2e-41 Score=310.09 Aligned_cols=215 Identities=48% Similarity=0.760 Sum_probs=206.2
Q ss_pred EEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCC
Q 011367 244 LLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGT 323 (487)
Q Consensus 244 ~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~ 323 (487)
++.|++|+|+||++.+|.|.++||||++||++++.+|++..|+|+.+.|.||+|++..+.+|..||+|.|.|+||+|.|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHHHHHH
Q 011367 324 PQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKN 403 (487)
Q Consensus 324 ~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~ 403 (487)
++|+|+|++|.||+|+|++.+..+|+...++|+.. ..||+++|++|++++++|..+|+..+++.+++|.||+|+|.+++
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986 67999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Q 011367 404 QINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 465 (487)
Q Consensus 404 ~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~ 465 (487)
.|.+ +..++++++++.+...++++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 161 ~l~~---~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEE---AGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHH---HGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHH---hhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9975 778999999999999999999999987 6999999999999999999999877
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=4.4e-40 Score=333.53 Aligned_cols=232 Identities=54% Similarity=0.864 Sum_probs=211.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEe----CCeEEEEEecC
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTID----NGVFEVLSTNG 76 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~----~~~~~v~~~~~ 76 (487)
.||++.||+++++|++.||++++.+++||+|||++|+......+.++||||+||||||++++++. ++.++++++.+
T Consensus 144 ~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~ 223 (383)
T 1dkg_D 144 AYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNG 223 (383)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeC
Confidence 48999999999999999999999999999999999987654357899999999999999999998 67888999889
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccC---C-ceeEEEecHH
Q 011367 77 DTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD---G-IDFSEPLTRA 152 (487)
Q Consensus 77 ~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~---~-~~~~~~itr~ 152 (487)
+..+||.+||+.|++++.++|..+++.++..+++.+.+|+..||++|+.||......+.++.+.+ | .++.+.|+|+
T Consensus 224 ~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~ 303 (383)
T 1dkg_D 224 DTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRA 303 (383)
T ss_dssp ESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHH
Confidence 89999999999999999999999999888888999999999999999999998888888776543 3 4567799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 153 RFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
+|+++++|+++++.++|.++|+++++.+.+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+
T Consensus 304 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l 382 (383)
T 1dkg_D 304 KLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVL 382 (383)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhh
Confidence 999999999999999999999999988889999999999999999999999999 5678888999999999999999875
Q ss_pred c
Q 011367 233 S 233 (487)
Q Consensus 233 s 233 (487)
+
T Consensus 383 ~ 383 (383)
T 1dkg_D 383 T 383 (383)
T ss_dssp C
T ss_pred C
Confidence 4
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=1.8e-38 Score=295.50 Aligned_cols=215 Identities=35% Similarity=0.600 Sum_probs=205.4
Q ss_pred EeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCCCe
Q 011367 246 LDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQ 325 (487)
Q Consensus 246 ~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~ 325 (487)
.|++|+++||++.+|.|.+|||+|++||++++.+|++..|+|+.+.|.||+|++..+.+|..||+|.|.|+||.|.|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHHHHHHHh
Q 011367 326 IEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQI 405 (487)
Q Consensus 326 i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l 405 (487)
|+|+|++|.||+|+|++.+..+|+...++|+.. ..||+++++++++++.++..+|+..+++.+++|.||+|+|.+|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987 6699999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 011367 406 NDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRS 467 (487)
Q Consensus 406 ~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~~~ 467 (487)
.+ +..+++++++..+...++++++||+++ +.++|++++++|++++.||..|++.++
T Consensus 160 ~~---~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA---DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH---HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh---hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 678999999999999999999999964 589999999999999999999987654
No 12
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=251.97 Aligned_cols=165 Identities=55% Similarity=0.886 Sum_probs=154.6
Q ss_pred ccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCC
Q 011367 240 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 319 (487)
Q Consensus 240 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 319 (487)
...+.+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHH
Q 011367 320 PRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVY 399 (487)
Q Consensus 320 ~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy 399 (487)
|.|.++|+|+|++|.||+|+|++.+..+|+...++|+.. ..||+++|++|++++++|..+|++.+++.+++|.||+|+|
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy 175 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIH 175 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred HHHHHh
Q 011367 400 NMKNQI 405 (487)
Q Consensus 400 ~~r~~l 405 (487)
.+|+.|
T Consensus 176 ~~~~~l 181 (182)
T 3n8e_A 176 DTETKM 181 (182)
T ss_dssp CCSCCC
T ss_pred HHHHhh
Confidence 988765
No 13
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.98 E-value=2e-32 Score=273.15 Aligned_cols=213 Identities=25% Similarity=0.362 Sum_probs=177.1
Q ss_pred CCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 1 MLLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
.||++.||+++++|++.||++++.+++||+|||++|+.... .+.+++|||+||||||++++...... ..++..+
T Consensus 104 ~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~l 177 (344)
T 1jce_A 104 IGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNVE-EPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRI 177 (344)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCTT-SSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESC
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCCC-CCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCc
Confidence 48999999999999999999999999999999999987644 46789999999999999999864321 2456789
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCce------eEEee--ecccCCceeEEEecHH
Q 011367 81 GGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQ------VRVEI--ESLFDGIDFSEPLTRA 152 (487)
Q Consensus 81 GG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i--~~~~~~~~~~~~itr~ 152 (487)
||.+||+.|.+++.+++ +.++. ...||++|+.|+.... ..+.+ ..+.+|.+..+.|+|+
T Consensus 178 GG~~id~~l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 244 (344)
T 1jce_A 178 AGDEMDEAIVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGG 244 (344)
T ss_dssp SHHHHHHHHHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHH
T ss_pred cChhHHHHHHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHH
Confidence 99999999999987654 33222 3689999999987642 23433 3455677788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC--cCCc-CEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhh
Q 011367 153 RFEELNNDLFRKTMGPVKKAMEDAGLE--KNQI-DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~--~~~i-~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 229 (487)
+|+++++|.++++.+.|.++|+.++.. ...+ +.|+|+||+|++|+|++.|++.| +.++..+.||++|||+||+++|
T Consensus 245 ~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a 323 (344)
T 1jce_A 245 EVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVL 323 (344)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHH
Confidence 999999999999999999999986532 1224 68999999999999999999999 5667778899999999999999
Q ss_pred hhcc
Q 011367 230 GILS 233 (487)
Q Consensus 230 ~~~s 233 (487)
..++
T Consensus 324 ~~~~ 327 (344)
T 1jce_A 324 DKVN 327 (344)
T ss_dssp GCHH
T ss_pred hChH
Confidence 7544
No 14
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.97 E-value=3e-31 Score=230.33 Aligned_cols=151 Identities=72% Similarity=1.051 Sum_probs=146.6
Q ss_pred EEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCCC
Q 011367 245 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 324 (487)
Q Consensus 245 ~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 324 (487)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|.|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHH
Q 011367 325 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395 (487)
Q Consensus 325 ~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 395 (487)
+|+|+|++|.||+|+|++.+..+|+...++|....+.||+++|++|++++++|..+|++.+++.+++|.||
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987899999999999999999999999999999999986
No 15
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.97 E-value=1.9e-31 Score=231.18 Aligned_cols=151 Identities=68% Similarity=1.035 Sum_probs=142.2
Q ss_pred EEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCCC
Q 011367 245 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 324 (487)
Q Consensus 245 ~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 324 (487)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|.|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHH
Q 011367 325 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395 (487)
Q Consensus 325 ~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 395 (487)
+|+|+|++|.||+|+|++.+..+|+...++|+.+.+.||+++|++|++++++|..+|++.+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999987889999999999999999999999999999999875
No 16
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.97 E-value=3.5e-31 Score=229.20 Aligned_cols=150 Identities=59% Similarity=0.940 Sum_probs=144.9
Q ss_pred EEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCCC
Q 011367 245 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 324 (487)
Q Consensus 245 ~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 324 (487)
+.|++|+|+|+++.+|.|.++||||++||++++.+|++..|+|+.+.|.||+|++..+.+|..||+|.|.|+||+|.|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHH
Q 011367 325 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395 (487)
Q Consensus 325 ~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 395 (487)
+|+|+|++|.||+|+|++.+..+|+...++|+.+ ..||+++|++|++++++|..+|++.+++.+++|.||
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999998 899999999999999999999999999999999875
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.96 E-value=5e-29 Score=217.69 Aligned_cols=151 Identities=66% Similarity=1.023 Sum_probs=145.4
Q ss_pred EEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCCCCCCC
Q 011367 245 LLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTP 324 (487)
Q Consensus 245 ~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~ 324 (487)
+.|++|++||+++.+|.|.++||+|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||.|.|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeCCccEEEEEEecCCCceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHH
Q 011367 325 QIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLE 395 (487)
Q Consensus 325 ~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~~~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE 395 (487)
+|+|+|++|.||+|+|++.+..+|+...++|....+.||+++++++++++.+|..+|+..+++.++||.||
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999887789999999999999999999999999999999875
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.91 E-value=4.3e-24 Score=217.00 Aligned_cols=197 Identities=16% Similarity=0.149 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHH
Q 011367 7 LRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 86 (487)
Q Consensus 7 qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id 86 (487)
.-+.+.+|++.|||++..++.||+|||++|..... +...++|||+||||||++++. ++.+.. .++..+||++||
T Consensus 169 ~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~~GG~~it 242 (419)
T 4a2a_A 169 VYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-KDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVPVGMKHVI 242 (419)
T ss_dssp HHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-HHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEESCCHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-ccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecccHHHHHH
Confidence 34678899999999999999999999999854322 356899999999999999987 554432 345789999999
Q ss_pred HHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCC-----ceeEEeeecccCCceeEEEecHHHHHHHHHHH
Q 011367 87 QRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ-----HQVRVEIESLFDGIDFSEPLTRARFEELNNDL 161 (487)
Q Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~ 161 (487)
+.|+..+ +.. ..+||++|+.++.. ....+.++... ......++|++|.++++|.
T Consensus 243 ~dIa~~l--------~~~-----------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ii~p~ 301 (419)
T 4a2a_A 243 KDVSAVL--------DTS-----------FEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSVIIHAR 301 (419)
T ss_dssp HHHHHHH--------TCC-----------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHHHHHHH
T ss_pred HHHHHHH--------CCC-----------HHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHHHHHHH
Confidence 9998753 221 37899999998752 34456666543 2456789999999999999
Q ss_pred HHHHHHHHHHHHHHcCC------CcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCC--C-----C----------CCch
Q 011367 162 FRKTMGPVKKAMEDAGL------EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN--K-----G----------VNPD 218 (487)
Q Consensus 162 ~~~~~~~i~~~l~~~~~------~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~--~-----~----------~~p~ 218 (487)
++++.+.|++.|+.++. ....++.|+|+||+|++|.|++.+++.| +.++. . + .+|.
T Consensus 302 veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-g~~vri~~~~~~~p~~~~~~~~~~~~P~ 380 (419)
T 4a2a_A 302 LREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-KSPVRTGCYANSDRPSIINADEVANDPS 380 (419)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-TSCEEECCGGGSSSCCCBTCHHHHTCGG
T ss_pred HHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-CCCeEEEecCCCCchhccCcccccCCch
Confidence 99999999999999987 3456899999999999999999999999 34332 1 1 4899
Q ss_pred hHHhhhhhhhhhh
Q 011367 219 EAVAYGAAVQGGI 231 (487)
Q Consensus 219 ~aVa~GAa~~a~~ 231 (487)
.+++.|.++++..
T Consensus 381 ~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 381 FAAAFGNVFAVSE 393 (419)
T ss_dssp GHHHHHTTCC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999864
No 19
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.90 E-value=2.8e-23 Score=176.45 Aligned_cols=119 Identities=58% Similarity=0.944 Sum_probs=109.6
Q ss_pred ccceEEEeeccccCceeeeCceeEEeeccccccCcceeEEEEeecCCceeEEEEEEecCccccccCcceeEEEecCCCCC
Q 011367 240 TKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPA 319 (487)
Q Consensus 240 ~~~~~~~d~~~~s~gi~~~~~~~~~ii~~~~~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~ 319 (487)
.+++.+.|++|+++|+++.++.|.++||||++||++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.++||+
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecC
Q 011367 320 PRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITND 358 (487)
Q Consensus 320 ~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~ 358 (487)
|+|.++|+|+|++|.||+|+|++.+..+|+...++|+.+
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 999999999999999999999999999999999999876
No 20
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.88 E-value=3e-22 Score=192.72 Aligned_cols=171 Identities=23% Similarity=0.330 Sum_probs=145.3
Q ss_pred CCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcc
Q 011367 2 LLSLFLRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLG 81 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG 81 (487)
+|+..+|++++.+++.+|+++..++.||+|++++|+.. ..+|+|+|||||+++++. .+... ......+|
T Consensus 102 ~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~------~~~viDiGggst~~~~~~--~g~~~---~~~~~~~G 170 (272)
T 3h1q_A 102 GTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN------DGIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTG 170 (272)
T ss_dssp CC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS------SEEEEEECSSCEEEEEEE--TTEEE---EECCBSCC
T ss_pred CCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC------CEEEEEECCCcEEEEEEE--CCEEE---EEecCCCc
Confidence 68899999999999999999999999999999998753 259999999999999986 44322 34668899
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHH
Q 011367 82 GEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDL 161 (487)
Q Consensus 82 G~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~ 161 (487)
|.+||+.+.+++. .+ ...++++|+.++ ++.++++++.+.
T Consensus 171 g~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~~----------------------~~~~~~~~~~~~ 209 (272)
T 3h1q_A 171 GTHLSLVLAGSYK--------IP-----------FEEAETIKKDFS----------------------RHREIMRVVRPV 209 (272)
T ss_dssp HHHHHHHHHHHHT--------CC-----------HHHHHHHHHSST----------------------THHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC--------CC-----------HHHHHHHHHhcC----------------------CHHHHHHHHHHH
Confidence 9999999988752 11 267889998875 588999999999
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhh
Q 011367 162 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 162 ~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 229 (487)
++++...+.+.|+..+ +++.|+|+||+|++|++++.+++.| +.++..+.+|++++|+|||++|
T Consensus 210 ~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 210 IEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHHHHHHhcC
Confidence 9999999999988643 4789999999999999999999999 6778888999999999999875
No 21
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.88 E-value=4.9e-23 Score=207.75 Aligned_cols=199 Identities=21% Similarity=0.208 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHcCCceeeeechhHHHHHHhccccC-CCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHH
Q 011367 7 LRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDF 85 (487)
Q Consensus 7 qR~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~-~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 85 (487)
..+++++|++.||+++..++.||+|||.+|+.... ..+..++|+|+||||||++++. .+.+. ..++..+||.+|
T Consensus 152 ~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~--~g~~~---~~~~~~~GG~~i 226 (377)
T 2ych_A 152 AVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLR--GDKPL---AVRVLTLSGKDF 226 (377)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEE--TTEEE---EEEEESCSHHHH
T ss_pred HHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEE--CCEEE---EEEeeechHHHH
Confidence 45889999999999999999999999999865332 2456899999999999999997 34321 245678999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHHHHHH
Q 011367 86 DQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKT 165 (487)
Q Consensus 86 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~ 165 (487)
|+.|++. ++.+ ...||++|+.++.............+-......++|++|+++++|.++++
T Consensus 227 ~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i 287 (377)
T 2ych_A 227 TEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVEL 287 (377)
T ss_dssp HHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHHHH
T ss_pred HHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHH
Confidence 9998863 3332 36899999999854322111000011112345789999999999999999
Q ss_pred HHHHHHHHHHc--CCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCC--------------------CCchhHHhh
Q 011367 166 MGPVKKAMEDA--GLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKG--------------------VNPDEAVAY 223 (487)
Q Consensus 166 ~~~i~~~l~~~--~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~--------------------~~p~~aVa~ 223 (487)
...|.+.|+.. +.....++.|+|+||+|++|.+++.+++.|+ .++... .+|..++|.
T Consensus 288 ~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~-~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~ 366 (377)
T 2ych_A 288 TQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG-VNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVAL 366 (377)
T ss_dssp HHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT-SEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC-CCeEecCchhhcccCcccCCHHHHHhhhHHHHHHH
Confidence 99999999853 5556789999999999999999999999994 332221 245567788
Q ss_pred hhhhhhh
Q 011367 224 GAAVQGG 230 (487)
Q Consensus 224 GAa~~a~ 230 (487)
|+|+++.
T Consensus 367 Glal~~~ 373 (377)
T 2ych_A 367 GLALRGV 373 (377)
T ss_dssp HHHHHHT
T ss_pred HHHHcCC
Confidence 8887764
No 22
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.88 E-value=8e-23 Score=203.21 Aligned_cols=192 Identities=15% Similarity=0.128 Sum_probs=145.6
Q ss_pred CCCHHHHHHHHHHHHHc--------C------CceeeeechhHHHHHHhcccc---CCCCcEEEEEEeCCCeEEEEEEEE
Q 011367 2 LLSLFLRQATKDAGIIA--------G------LNVARIINEPTAAAIAYGLDK---KGGEKNILVFDLGGGTFDVSILTI 64 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa~~A--------G------l~~~~li~Ep~Aaa~~y~~~~---~~~~~~vlv~D~GggT~dvsv~~~ 64 (487)
+|++.||+++++|+..+ | ++.+.+++||+|||++| +.. .....+++|||+||||||++++.+
T Consensus 131 ~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~ 209 (346)
T 2fsj_A 131 GTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINL 209 (346)
T ss_dssp GGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHHHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEe
Confidence 67889999999997665 4 34588999999999988 222 113478999999999999999998
Q ss_pred eCCeEEEEEecCCCCcchhHHHHHHHHHHHHHHHHhcCC--CCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCC
Q 011367 65 DNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGK--DISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDG 142 (487)
Q Consensus 65 ~~~~~~v~~~~~~~~lGG~~id~~l~~~~~~~~~~~~~~--~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~ 142 (487)
.++. .+....++..+||.++++.|.+++. ++|+. .+.. ..+| .. ..+.+ .+
T Consensus 210 ~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~----~~~g~~~~i~~---------~~~e-------~~--~~~~~----~g 262 (346)
T 2fsj_A 210 MDME-PVVELSFSLQIGVGDAISALSRKIA----KETGFVVPFDL---------AQEA-------LS--HPVMF----RQ 262 (346)
T ss_dssp TTTE-ECGGGCEEESCCHHHHHHHHHHHHH----HHHCCCCCHHH---------HHHH-------TT--SCEEE----TT
T ss_pred cCCE-EEeecCCCcchhHHHHHHHHHHHHH----HHhCCCcCCCH---------HHHh-------cC--CeEeE----CC
Confidence 7776 5555567788999999999887754 45665 3321 1122 11 11222 23
Q ss_pred ceeEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCC-CCCCCchhH
Q 011367 143 IDFSEPLTRARF-EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEA 220 (487)
Q Consensus 143 ~~~~~~itr~~f-e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~-~~~~~p~~a 220 (487)
. .++++++ +++++++++++.+.|++.|+.+ ...++.|+|+||+|++ +++.|++.|+...+ ....||++|
T Consensus 263 ~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~a 333 (346)
T 2fsj_A 263 K----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFA 333 (346)
T ss_dssp E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTH
T ss_pred c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHH
Confidence 3 2458999 9999999999999999999875 4578999999999999 99999999963322 226799999
Q ss_pred Hhhhhhhhhh
Q 011367 221 VAYGAAVQGG 230 (487)
Q Consensus 221 Va~GAa~~a~ 230 (487)
+|+|+..++.
T Consensus 334 va~G~~~~~~ 343 (346)
T 2fsj_A 334 NALGYRDAAE 343 (346)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 23
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.82 E-value=2.9e-20 Score=189.96 Aligned_cols=218 Identities=17% Similarity=0.103 Sum_probs=157.0
Q ss_pred CCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHH-hcccc-CCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCC
Q 011367 1 MLLSLFLRQATKDAG-IIAGLNVARIINEPTAAAIA-YGLDK-KGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGD 77 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~-y~~~~-~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~ 77 (487)
.+|+..+|++|.+++ +.+|++.+.+++||+||+++ |.... ...+.+.||||+||||||++++. ++. .+....+.
T Consensus 116 ~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~-~~~~~~~~ 192 (418)
T 1k8k_A 116 PLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGY-VIGSCIKH 192 (418)
T ss_dssp TTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTE-ECGGGCEE
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCE-EcccceEE
Confidence 378999999999999 88999999999999999987 42111 01122679999999999999986 443 23333355
Q ss_pred CCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCc-----------------eeEEeeeccc
Q 011367 78 THLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH-----------------QVRVEIESLF 140 (487)
Q Consensus 78 ~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~-----------------~~~i~i~~~~ 140 (487)
..+||+++|+.|.++|.++. +......+ ...+|++|+.++... ...+.++...
T Consensus 193 ~~lGG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~ 262 (418)
T 1k8k_A 193 IPIAGRDITYFIQQLLRDRE---VGIPPEQS-------LETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAI 262 (418)
T ss_dssp ESCSHHHHHHHHHHHHHTTC---CCCCGGGH-------HHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTT
T ss_pred EeCcHHHHHHHHHHHHHhcC---CCCCCHHH-------HHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCC
Confidence 78999999999999876542 12211111 245778888775431 1356666555
Q ss_pred CCceeEEEecHHHH---HHHHHHHH------HHHHHHHHHHHHHcC--CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCC-
Q 011367 141 DGIDFSEPLTRARF---EELNNDLF------RKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG- 208 (487)
Q Consensus 141 ~~~~~~~~itr~~f---e~~~~~~~------~~~~~~i~~~l~~~~--~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~- 208 (487)
.+.+..+.|++++| |.++.|.+ ..+.+.|.+.|..+. +....++.|+|+||+|++|.+++.|.+.+..
T Consensus 263 ~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~ 342 (418)
T 1k8k_A 263 SKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRT 342 (418)
T ss_dssp TCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred CCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHh
Confidence 56677889999999 55555542 568888999998864 3345678899999999999999999876521
Q ss_pred ----------------------CCCCCCCCchhHHhhhhhhhhhh
Q 011367 209 ----------------------KEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 209 ----------------------~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
.++..+.+|..++.+||+++|..
T Consensus 343 ~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 343 VDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred hccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 12233457889999999999863
No 24
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.80 E-value=9.8e-20 Score=183.24 Aligned_cols=207 Identities=15% Similarity=0.143 Sum_probs=145.2
Q ss_pred CCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCC
Q 011367 1 MLLSLFLRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTH 79 (487)
Q Consensus 1 ~~f~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 79 (487)
.+|+..+|+++.+++ +.+|++.+.+++||+|||++++. .+.||+|+||||||++.+. +|. .+....+..+
T Consensus 109 ~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------~~~lVvDiG~gtt~v~~v~--~G~-~~~~~~~~~~ 179 (375)
T 2fxu_A 109 PLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------TTGIVLDSGDGVTHNVPIY--EGY-ALPHAIMRLD 179 (375)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------SSEEEEEECSSCEEEEEEE--TTE-ECGGGCEEES
T ss_pred CCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------CeEEEEEcCCCceEEeEeE--CCE-EeccceEEec
Confidence 378999999888765 77899999999999999999975 3679999999999987764 553 2332234578
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHcc----------------CCceeEEeeecccCCc
Q 011367 80 LGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALS----------------SQHQVRVEIESLFDGI 143 (487)
Q Consensus 80 lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls----------------~~~~~~i~i~~~~~~~ 143 (487)
+||+++|+.|.+++..+ .+........ ..+|++|+.++ ......+.++ ++.
T Consensus 180 ~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~ 246 (375)
T 2fxu_A 180 LAGRDLTDYLMKILTER---GYSFVTTAER-------EIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ 246 (375)
T ss_dssp CCHHHHHHHHHHHHHHH---TCCCCSHHHH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC
T ss_pred cCHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC
Confidence 99999999999998764 1222111111 33444555443 2223334333 232
Q ss_pred eeEEEecHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCC-----
Q 011367 144 DFSEPLTRARF---EELNNDL-----FRKTMGPVKKAMEDAG--LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDG----- 208 (487)
Q Consensus 144 ~~~~~itr~~f---e~~~~~~-----~~~~~~~i~~~l~~~~--~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~----- 208 (487)
.+.|+++.| |.++.|. ...+.+.|.+.|.++. +....++.|+|+||+|++|.++++|.+.+..
T Consensus 247 --~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~ 324 (375)
T 2fxu_A 247 --VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPST 324 (375)
T ss_dssp --EEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTT
T ss_pred --EEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCC
Confidence 467888877 3344443 2457778888887652 2234468899999999999999999987731
Q ss_pred --CCCCCCCCchhHHhhhhhhhhhh
Q 011367 209 --KEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 209 --~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
.++..+.+|..++++||+++|..
T Consensus 325 ~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 325 MKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp CCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred eeEEEEcCCCCCccEEcchHHhhCc
Confidence 23445679999999999999973
No 25
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.76 E-value=8.7e-19 Score=172.49 Aligned_cols=181 Identities=16% Similarity=0.177 Sum_probs=127.0
Q ss_pred HHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHHHHHHHHHH
Q 011367 16 IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIK 95 (487)
Q Consensus 16 ~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~~~~ 95 (487)
+.+++..+.+++||.||+++|.... ..+..++|+|+||||||++++. ++.+.+....++.++||.+||+.|.+++.+
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~-~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~ 212 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQEL-DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL 212 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHS-CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccc-cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH
Confidence 3455677899999999999886332 2467899999999999999998 444455656777899999999999988753
Q ss_pred HHHHhcCCCCccCHHHHHHHHHHHHHH-HHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHH
Q 011367 96 LIKKKHGKDISKDKRAIGKLRREAERA-KRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAME 174 (487)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~L~~~~e~~-K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~ 174 (487)
+ +.+++ . ..+|++ |..- .. .......+ ..-+.+++.+++++.++++.+.|.+.++
T Consensus 213 ----~-~~~i~--~-------~~ae~~lk~~~---~~--~~~~~~i~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~ 268 (320)
T 2zgy_A 213 ----A-RTKGS--S-------YLADDIIIHRK---DN--NYLKQRIN-----DENKISIVTEAMNEALRKLEQRVLNTLN 268 (320)
T ss_dssp ----C-SBGGG--H-------HHHHHHHHTTT---CH--HHHHHHSS-----SSCTHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----c-CCCCC--H-------HHHHHHHHHhh---hh--hcccceec-----CchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 33222 1 234444 3320 00 00000000 0113456667777777777777777776
Q ss_pred HcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCC--CCCCCCCchhHHhhhhhhhh
Q 011367 175 DAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK--EPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 175 ~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~--~~~~~~~p~~aVa~GAa~~a 229 (487)
+ ..+++.|+|+||+|++ +++.|++.|+.. ++..+.||++|+|+||+++|
T Consensus 269 ~----~~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 269 E----FSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp T----CCCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred h----hcCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 5 2578999999999998 999999999532 46678899999999999876
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.55 E-value=7.8e-14 Score=134.07 Aligned_cols=176 Identities=18% Similarity=0.170 Sum_probs=119.3
Q ss_pred ceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHHHHHHHHHHHHHHh
Q 011367 21 NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKK 100 (487)
Q Consensus 21 ~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~~~~~~~~~ 100 (487)
.++..|+||+|+++++.+... ....|+|+|||+++++++. .++.+++....++...|+.+|+..+++++.-
T Consensus 72 ~~~~~Vne~~aha~a~~~~~~---~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~----- 142 (276)
T 4ehu_A 72 DADKQISELSCHARGVNFIIP---ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEV----- 142 (276)
T ss_dssp SCSEECCHHHHHHHHHHHHST---TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTC-----
T ss_pred CCCcccchHHHHHHHHHHhCC---CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhcc-----
Confidence 567899999999988765443 3457899999999999884 5677888888898999999999888887632
Q ss_pred cCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEE--------EecHHHHHHHHHHHHHHHHHHHHHH
Q 011367 101 HGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSE--------PLTRARFEELNNDLFRKTMGPVKKA 172 (487)
Q Consensus 101 ~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~--------~itr~~fe~~~~~~~~~~~~~i~~~ 172 (487)
++..-+ +..+.......+ . .....+ .-.....++++..+.+.+.+.+...
T Consensus 143 ---~~~~~~-------------~~~~~a~~~~~i--~----~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~ 200 (276)
T 4ehu_A 143 ---DVSELG-------------SISMNSQNEVSI--S----STCTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSL 200 (276)
T ss_dssp ---CGGGHH-------------HHHTTCSSCCCC--C----CCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---ChhhhH-------------HHHhcCCCCCCc--C----CccchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 221100 000111110000 0 000000 0000113455666666665555554
Q ss_pred HHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 173 MEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 173 l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
..+. ..++.|+|+||.+++|.||+.+++.| +.++..+.+|++++|+|||++|...
T Consensus 201 ~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 201 VKRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHH
Confidence 4443 45788999999999999999999999 7888899999999999999999643
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.53 E-value=6e-15 Score=146.52 Aligned_cols=189 Identities=19% Similarity=0.240 Sum_probs=124.6
Q ss_pred HH-HHHHHHHHHcCC------------ceeeeechhHHHHHHhccccCC-----CCcEEEEEEeCCCeEEEEEEEEeCCe
Q 011367 7 LR-QATKDAGIIAGL------------NVARIINEPTAAAIAYGLDKKG-----GEKNILVFDLGGGTFDVSILTIDNGV 68 (487)
Q Consensus 7 qR-~a~~~Aa~~AGl------------~~~~li~Ep~Aaa~~y~~~~~~-----~~~~vlv~D~GggT~dvsv~~~~~~~ 68 (487)
+| +++++++.-++- ..+.+++||.||++++...... .+..++|+|+||||||++++ .++.
T Consensus 128 ~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~--~~~~ 205 (355)
T 3js6_A 128 DKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTY--QNMK 205 (355)
T ss_dssp HHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEE--ETTE
T ss_pred HHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEE--cCCE
Confidence 44 688888875543 4678999999999998765421 36789999999999999998 3444
Q ss_pred EEEEEecCCCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCce--eE
Q 011367 69 FEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGID--FS 146 (487)
Q Consensus 69 ~~v~~~~~~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~--~~ 146 (487)
+ +....+...+||..+++++.+++.+++. +..+. . ...++.+. +. ..+.+ -.
T Consensus 206 ~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~---------~~----~~~~~~~k~ 259 (355)
T 3js6_A 206 R-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE---------YK----QCKLNQKTV 259 (355)
T ss_dssp E-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC------------------------
T ss_pred E-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc---------cc----ccccccccc
Confidence 2 1112233679999999999999766531 22222 1 11111110 00 00000 01
Q ss_pred EEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHH--HHHHHHhhcCCCCCCCCCCchhHHhhh
Q 011367 147 EPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPK--VQQLLKDYFDGKEPNKGVNPDEAVAYG 224 (487)
Q Consensus 147 ~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~--v~~~l~~~f~~~~~~~~~~p~~aVa~G 224 (487)
+.+ .+.+++.+++.++++...|++.+.+ +..++.|+|+||++.++. |.+.|++.||.. .||..|+|+|
T Consensus 260 ~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-----~~p~~anA~G 329 (355)
T 3js6_A 260 IDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-----DDSQFSNVRG 329 (355)
T ss_dssp --C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-----SSGGGHHHHH
T ss_pred ccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC-----CCcHHHHHHH
Confidence 122 2356677777777777777777653 466899999999999998 899999999532 7999999999
Q ss_pred hhhhhhhcc
Q 011367 225 AAVQGGILS 233 (487)
Q Consensus 225 Aa~~a~~~s 233 (487)
+..++..+.
T Consensus 330 ~~~~~~~~~ 338 (355)
T 3js6_A 330 YEKLGELLK 338 (355)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 28
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.49 E-value=1.6e-13 Score=112.95 Aligned_cols=84 Identities=42% Similarity=0.791 Sum_probs=77.7
Q ss_pred hhHhHHHHhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011367 383 KVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITA 462 (487)
Q Consensus 383 ~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r 462 (487)
.+++++++||.||+|||.++..|.++ .+..+++++++..|...++++++||+++.+++.++|+.++++|++++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~-~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDE-GLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCG-GGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999763 58899999999999999999999999988889999999999999999999999
Q ss_pred HHhhc
Q 011367 463 VYQRS 467 (487)
Q Consensus 463 ~~~~~ 467 (487)
+++++
T Consensus 82 ~y~~~ 86 (113)
T 3lof_A 82 LYQGA 86 (113)
T ss_dssp HHHC-
T ss_pred HHHhc
Confidence 99864
No 29
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.47 E-value=1.7e-14 Score=145.85 Aligned_cols=206 Identities=17% Similarity=0.150 Sum_probs=89.8
Q ss_pred CCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 2 LLSLFLRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
+++..+|+++.+++ +.+|++.+.+++||.||+++++. .+.+|+|+|+|||+++.+. ++.. +........+
T Consensus 114 ~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------~~~lVVDiG~g~T~v~pv~--~G~~-~~~~~~~~~~ 184 (394)
T 1k8k_B 114 MNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------LTGVVVDSGDGVTHICPVY--EGFS-LPHLTRRLDI 184 (394)
T ss_dssp ----------------------------------------------CCEEEECSSCEEEECEE--TTEE-CSTTCEEESC
T ss_pred CCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------ceEEEEEcCCCceEeeeeE--CCEE-cccceEEeec
Confidence 45678899888865 77899999999999999998875 3569999999999998775 3432 1111233579
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCc----------------eeEEeeecccCCce
Q 011367 81 GGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQH----------------QVRVEIESLFDGID 144 (487)
Q Consensus 81 GG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------------~~~i~i~~~~~~~~ 144 (487)
||+++|+.|.+++..+ .+........ ..+|.+|+.++... ...+.++ ++.
T Consensus 185 GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp---dg~- 250 (394)
T 1k8k_B 185 AGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP---DGR- 250 (394)
T ss_dssp CHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC-
T ss_pred cHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---CCC-
Confidence 9999999999987653 1222111122 34566666554321 1122222 232
Q ss_pred eEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--cCCcCEEEEEcCCCCcHHHHHHHHhhcCC------
Q 011367 145 FSEPLTRARFE---ELNNDL-----FRKTMGPVKKAMEDAGLE--KNQIDEIVLVGGSTRIPKVQQLLKDYFDG------ 208 (487)
Q Consensus 145 ~~~~itr~~fe---~~~~~~-----~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~s~ip~v~~~l~~~f~~------ 208 (487)
.+.|+++.|. -++.|. ...+.+.|.+.|.++... ..-.+.|+|+||+|.+|.+.++|.+.+..
T Consensus 251 -~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~ 329 (394)
T 1k8k_B 251 -IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERV 329 (394)
T ss_dssp -EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHT
T ss_pred -EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhh
Confidence 4567777773 334442 245677888888876432 33457899999999999999999877631
Q ss_pred ------------CCCCCCCCchhHHhhhhhhhhhh
Q 011367 209 ------------KEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 209 ------------~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
.++..+.+|..++.+|++++|..
T Consensus 330 ~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 330 LKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp CSSCCCTTCCCCC----------------------
T ss_pred cccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 12233567889999999999863
No 30
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.45 E-value=6.4e-14 Score=137.91 Aligned_cols=174 Identities=18% Similarity=0.238 Sum_probs=120.2
Q ss_pred eeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHHHHHHHHHHHHHHhc
Q 011367 22 VARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFIKLIKKKH 101 (487)
Q Consensus 22 ~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~~~~~~~~~~ 101 (487)
.+.+++||.+|.+.+. ...+...++|+|+||||||++++. .+.+ +....+...+||..+++.|.+++.. .+|
T Consensus 151 ~v~v~pe~~ga~~~~~--~~~~~~~v~vvDiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~ 222 (329)
T 4apw_A 151 DITIKAEGSGVLFLEQ--ENFKNKNVAVIDFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNN 222 (329)
T ss_dssp EEEEEEHHHHHHHHSC--CCCTTCEEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSS
T ss_pred EEEEEeccHHHHhhcc--hhhccCCEEEEEeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hcc
Confidence 4678899988887652 222578999999999999999998 4443 2222344679999999999887543 156
Q ss_pred CCCCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 011367 102 GKDISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKN 181 (487)
Q Consensus 102 ~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~ 181 (487)
+..+.. ..++++|+. .. . ..+.+. ..+..+.+++.+++.++.+.+.|++. +..+.
T Consensus 223 g~~i~~---------~~~e~i~~~--g~--~-------~~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~ 277 (329)
T 4apw_A 223 GNLITN---------EQAESALNN--GY--M-------KKGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLD 277 (329)
T ss_dssp CSCTTS---------BTTTTCSSS--CS--S-------CEECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTT
T ss_pred CCCCCH---------HHHHHHHhc--CC--c-------ccCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHH
Confidence 655433 233344432 11 0 001111 13456777777777777777777765 34556
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
.++.|+|+||++.+ +.+.|++.|+ ..+....||..|+|+|+..++..
T Consensus 278 ~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 278 QLDSLIFIGGTTQK--LKEQISKTYP-NNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp SCSEEEEESTTHHH--HHHHHHHHST-TCEECCSSGGGHHHHHHHHHHHH
T ss_pred HccEEEEECChHHH--HHHHHHHHcC-CCCEecCCChhhHHHHHHHHHhh
Confidence 68999999999998 5699999995 35667789999999999988754
No 31
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.35 E-value=1.7e-12 Score=107.75 Aligned_cols=89 Identities=44% Similarity=0.768 Sum_probs=75.2
Q ss_pred hHhHHHHhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 011367 384 VKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAV 463 (487)
Q Consensus 384 ~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~ 463 (487)
++++.++||.||+|||.++..|.++ .+...++++++..|...++++++||+++.+++.++|+.++++|++++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~-~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDE-KLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCT-TTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678999999999999999999752 478899999999999999999999987667889999999999999999999999
Q ss_pred HhhcCCCCCC
Q 011367 464 YQRSGGAPGA 473 (487)
Q Consensus 464 ~~~~~~~~~~ 473 (487)
++.++++|++
T Consensus 92 y~~~~~~~~~ 101 (120)
T 2p32_A 92 YQSAGGAPPG 101 (120)
T ss_dssp CCC-------
T ss_pred HHhccCCCCC
Confidence 8655555543
No 32
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.33 E-value=5.7e-13 Score=134.37 Aligned_cols=190 Identities=20% Similarity=0.183 Sum_probs=128.7
Q ss_pred HHHHHHHc-CC--ceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHH
Q 011367 11 TKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQ 87 (487)
Q Consensus 11 ~~~Aa~~A-Gl--~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~ 87 (487)
+.+|.+.+ |+ ++-. -||.||+++... .+..+..++++||||||||++++.-+...+ ......||+.++.
T Consensus 375 I~~~Ver~~gL~veV~g--~ep~AA~laaLT-edE~elGvaiIDmGgGTTd~sVf~~g~lv~-----a~~ip~gG~~VT~ 446 (607)
T 1nbw_A 375 IARELSARLQTEVVVGG--VEANMAIAGALT-TPGCAAPLAILDLGAGSTDAAIVNAEGQIT-----AVHLAGAGNMVSL 446 (607)
T ss_dssp HHHHHHHHHTSEEEECS--CHHHHHHHHHTT-STTCCSSEEEEEECSSEEEEEEECSSSCEE-----EEEEECCHHHHHH
T ss_pred HHHHHHhccCCcceecc--ccHHHhhhhhcC-CCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchHHHHH
Confidence 56788888 99 6666 999999998844 444578899999999999999997555543 2235689999999
Q ss_pred HHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCC----------ceeEEee--ecccCC---c------eeE
Q 011367 88 RVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------HQVRVEI--ESLFDG---I------DFS 146 (487)
Q Consensus 88 ~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~~~---~------~~~ 146 (487)
.|..-| +.. . +..||++|+ .... +...+.+ +.+... . +.-
T Consensus 447 DIA~~L--------g~~--d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L 507 (607)
T 1nbw_A 447 LIKTEL--------GLE--D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGEL 507 (607)
T ss_dssp HHHHHH--------TCS--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEETTEE
T ss_pred HHHHHh--------CCC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccce
Confidence 987653 222 0 167899998 5322 1112333 211110 1 111
Q ss_pred EEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----cCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCC------
Q 011367 147 EPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGLE-----KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP------ 211 (487)
Q Consensus 147 ~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~~-----~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~------ 211 (487)
..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|++|.+.++..+.|+.-++
T Consensus 508 ~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~ 585 (607)
T 1nbw_A 508 VPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGN 585 (607)
T ss_dssp EEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECC
T ss_pred eee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCC
Confidence 244 555 666 55555555444 34457766543 35679999999999999999999999943122
Q ss_pred -CCCCCchhHHhhhhhhhh
Q 011367 212 -NKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 212 -~~~~~p~~aVa~GAa~~a 229 (487)
...-.|..|+|.|.+++.
T Consensus 586 ~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 586 IRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp GGGTSCSCCHHHHHHHHHH
T ss_pred ccccCCchHHHHHHHHHhh
Confidence 224589999999999764
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.32 E-value=9.8e-12 Score=124.97 Aligned_cols=193 Identities=22% Similarity=0.231 Sum_probs=129.4
Q ss_pred HHHHHHHHHc-CC--ceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHH
Q 011367 9 QATKDAGIIA-GL--NVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDF 85 (487)
Q Consensus 9 ~a~~~Aa~~A-Gl--~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 85 (487)
+-+.+|.+.+ |+ ++-. -||.||+++... .+..+..++++||||||||++++.-+...+ ......||+.+
T Consensus 371 ~NI~~cVer~~gL~veV~g--~ep~AAglaaLT-eDE~eLGvaiIDmGGGTTd~sVf~~G~lv~-----a~~ip~gG~~V 442 (610)
T 2d0o_A 371 AMIAREIEQKLNIDVQIGG--AEAEAAILGALT-TPGTTRPLAILDLGAGSTDASIINPKGDII-----ATHLAGAGDMV 442 (610)
T ss_dssp HHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTT-STTCCSSEEEEEECSSEEEEEEECTTCCEE-----EEEEECSHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcC-CCCCcCCeEEEEeCCCcceEEEEcCCcEEE-----EEEeccchHHH
Confidence 4567788889 99 7767 999999998844 444578899999999999999997555443 22356899999
Q ss_pred HHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCC----------ceeEEee--ecccCC---c------e
Q 011367 86 DQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQ----------HQVRVEI--ESLFDG---I------D 144 (487)
Q Consensus 86 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------~~~~i~i--~~~~~~---~------~ 144 (487)
+..|..-| +.. . +..||++|+ .... +...+.+ +.+... . +
T Consensus 443 T~DIA~~L--------gt~--d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~~~~ 503 (610)
T 2d0o_A 443 TMIIAREL--------GLE--D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKAD 503 (610)
T ss_dssp HHHHHHHH--------TCC--C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEECSS
T ss_pred HHHHHHHh--------CCC--C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeeccccc
Confidence 99987653 222 0 167899998 5322 1112333 221110 1 1
Q ss_pred eEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCC----
Q 011367 145 FSEPLTRAR--FEELNNDLFRKTMGP--VKKAMEDAGL-----EKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP---- 211 (487)
Q Consensus 145 ~~~~itr~~--fe~~~~~~~~~~~~~--i~~~l~~~~~-----~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~---- 211 (487)
.-..| +.+ +|+ ++-+-+++.+. +...|+..+. ...+|..|+|+||+|++|.+.++..+.|+.-++
T Consensus 504 ~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGr 581 (610)
T 2d0o_A 504 ELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGR 581 (610)
T ss_dssp CEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEE
T ss_pred ceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEec
Confidence 11245 556 666 55555555444 2333444321 346779999999999999999999999943132
Q ss_pred ---CCCCCchhHHhhhhhhhhh
Q 011367 212 ---NKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 212 ---~~~~~p~~aVa~GAa~~a~ 230 (487)
...-.|..|+|.|.+++..
T Consensus 582 P~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 582 GNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp CCGGGTSTTSCHHHHHHHHHHH
T ss_pred CCccccCCCcHHHHHHHHHHHh
Confidence 2245899999999998754
No 34
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.25 E-value=7.2e-12 Score=103.07 Aligned_cols=85 Identities=47% Similarity=0.851 Sum_probs=73.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011367 387 KIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQR 466 (487)
Q Consensus 387 ~~~a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~~ 466 (487)
+.++||.||+|||.++..|.++ .+..+++++++..|...++++++||+++.+++.++|++++++|++++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~-e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDE-KLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSG-GGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcch-hhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678999999999999999742 478899999999999999999999986555678999999999999999999999976
Q ss_pred cCCCCC
Q 011367 467 SGGAPG 472 (487)
Q Consensus 467 ~~~~~~ 472 (487)
++++|+
T Consensus 81 ~~~~~~ 86 (113)
T 1ud0_A 81 AGGMPG 86 (113)
T ss_dssp SCCCCC
T ss_pred ccCCCC
Confidence 555554
No 35
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.97 E-value=2.1e-10 Score=116.43 Aligned_cols=212 Identities=20% Similarity=0.116 Sum_probs=130.4
Q ss_pred CCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCC--CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCC
Q 011367 3 LSLFLRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKG--GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTH 79 (487)
Q Consensus 3 f~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~--~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 79 (487)
....+|+.+.+.+ +..|+.-+.++.+|.+|+++.+..... ...+-||+|+|+|+|+++.+. +|.. +........
T Consensus 134 ~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~--~G~~-l~~~~~rl~ 210 (427)
T 3dwl_A 134 NPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVA--EGYV-IGSSIKTMP 210 (427)
T ss_dssp CCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEE--TTEE-CGGGCEEES
T ss_pred CCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccccCCCceEEEEECCCCceEEEEEE--CCEE-ehhhheecc
Confidence 4567888888887 778999999999999999888753211 134679999999999999984 2321 111111246
Q ss_pred cchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHccCCce-------------eEEeeecc--cCCce
Q 011367 80 LGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAKRALSSQHQ-------------VRVEIESL--FDGID 144 (487)
Q Consensus 80 lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-------------~~i~i~~~--~~~~~ 144 (487)
+||+++|+.|.+++..+... .. =...++.+|+.++.... ..+.--.+ .+|..
T Consensus 211 ~gG~~lt~~L~~lL~~~~~~----~~---------~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~ 277 (427)
T 3dwl_A 211 LAGRDVTYFVQSLLRDRNEP----DS---------SLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHS 277 (427)
T ss_dssp CCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC-------
T ss_pred ccHHHHHHHHHHHHHHcCCC----ch---------hHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCe
Confidence 99999999998886543211 00 01445666666543210 00100011 23444
Q ss_pred eEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--cCCcCEEEEEcCCCCcHHHHHHHHhhc----C--
Q 011367 145 FSEPLTRARF---EELNNDL------FRKTMGPVKKAMEDAGLE--KNQIDEIVLVGGSTRIPKVQQLLKDYF----D-- 207 (487)
Q Consensus 145 ~~~~itr~~f---e~~~~~~------~~~~~~~i~~~l~~~~~~--~~~i~~V~LvGG~s~ip~v~~~l~~~f----~-- 207 (487)
..+.|..++| |-++.|- ...+.+.|.+.|.++..+ +.-...|+|+||+|.+|.+.++|.+.+ +
T Consensus 278 ~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~ 357 (427)
T 3dwl_A 278 TTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDER 357 (427)
T ss_dssp --CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC
T ss_pred eEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhh
Confidence 4567777776 3344442 234777777777764321 122366999999999999999988754 1
Q ss_pred -------------C--CCCCCCCCchhHHhhhhhhhhh
Q 011367 208 -------------G--KEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 208 -------------~--~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
. .++..+.++..++=+|++++|.
T Consensus 358 ~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 358 IHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp -------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred ccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 1 1233345778899999999986
No 36
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=98.59 E-value=5.2e-08 Score=100.00 Aligned_cols=83 Identities=18% Similarity=0.199 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcch
Q 011367 4 SLFLRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGG 82 (487)
Q Consensus 4 ~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG 82 (487)
....|+.+.+.+ +..|+.-+.++.+|.+|+++++.. +-||+|+|+|+|+++.+. +|.. +........+||
T Consensus 126 ~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~------tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG 196 (498)
T 3qb0_A 126 STENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRP------NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAG 196 (498)
T ss_dssp CHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS------SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSH
T ss_pred cHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCC------eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccH
Confidence 456888888865 779999999999999999888752 249999999999999985 3321 111111246999
Q ss_pred hHHHHHHHHHHHH
Q 011367 83 EDFDQRVMEYFIK 95 (487)
Q Consensus 83 ~~id~~l~~~~~~ 95 (487)
+++|+.|.++|..
T Consensus 197 ~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 197 KFINHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 37
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.41 E-value=4.6e-06 Score=79.24 Aligned_cols=73 Identities=19% Similarity=0.206 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
++++..+++.+...+.+.++..+ -.+.|+++||.++.|.+++.+.+.+ +.++..+.+|+.+.|.|||+.|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~----~~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVG----IVKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTC----CCSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC----CCCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 34444455555554544444321 1378999999999999999999999 6777778888889999999998753
No 38
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.11 E-value=5.8e-05 Score=79.99 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=61.6
Q ss_pred CCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 2 LLSLFLRQATKDAG-IIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa-~~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
+++...|+.|.+-+ +.-|+.-+.++.+|.+|++++|.. +-+|||+|.++|.|+-|.-+-. +........+
T Consensus 208 ~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~------tglVVDiG~~~T~v~PV~dG~~---l~~~~~rl~~ 278 (593)
T 4fo0_A 208 IYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS------STCIVDVGDQKTSVCCVEDGVS---HRNTRLCLAY 278 (593)
T ss_dssp SCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS------EEEEEEECSSCEEEEEEESSCB---CGGGCEEESC
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC------ceEEEEeCCCceeeeeeECCEE---ehhheEEecc
Confidence 35666777666654 456899999999999999988643 5689999999999988763211 0011112469
Q ss_pred chhHHHHHHHHHHHH
Q 011367 81 GGEDFDQRVMEYFIK 95 (487)
Q Consensus 81 GG~~id~~l~~~~~~ 95 (487)
||.++++.|.++|..
T Consensus 279 GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 279 GGSDVSRCFYWLMQR 293 (593)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh
Confidence 999999999888754
No 39
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.63 E-value=0.00072 Score=64.13 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=53.0
Q ss_pred ecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcC-CCCcHHHHHHHHhhc--CCCCCCCCCCchhHHhhh
Q 011367 149 LTRARFEE-LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGG-STRIPKVQQLLKDYF--DGKEPNKGVNPDEAVAYG 224 (487)
Q Consensus 149 itr~~fe~-~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG-~s~ip~v~~~l~~~f--~~~~~~~~~~p~~aVa~G 224 (487)
.+++++-. ++..+.+++..+.....+.. .++.|+++|| .+..|.+++.+.+.+ .+.++..+.+|+.+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~-----~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREF-----KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35554432 33444444444433333332 3557999999 899999999999875 356778889999999999
Q ss_pred hhhhh
Q 011367 225 AAVQG 229 (487)
Q Consensus 225 Aa~~a 229 (487)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 40
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.30 E-value=0.0018 Score=63.14 Aligned_cols=70 Identities=19% Similarity=0.092 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHcCCCcCCcCEEEEEcC-CCCcHHHHHHHHhhcC-----CCCCCCCCCchhHHhhh
Q 011367 155 EELNNDLFRKTMGPVKKAM----EDAGLEKNQIDEIVLVGG-STRIPKVQQLLKDYFD-----GKEPNKGVNPDEAVAYG 224 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l----~~~~~~~~~i~~V~LvGG-~s~ip~v~~~l~~~f~-----~~~~~~~~~p~~aVa~G 224 (487)
++++..++..+.+.|-..- +..+ ++.|+++|| .+..|.+++.|++.+. +.++..+.+|..+-|.|
T Consensus 279 eDIa~gll~sVa~~I~~lA~l~A~~~~-----i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlG 353 (360)
T 2i7n_A 279 EDLARATLVTITNNIGSIARMCALNEN-----IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVG 353 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHH
Confidence 4445555555544444332 3323 456999999 8999999999998862 35677788999999999
Q ss_pred hhhhh
Q 011367 225 AAVQG 229 (487)
Q Consensus 225 Aa~~a 229 (487)
||+.+
T Consensus 354 AaL~~ 358 (360)
T 2i7n_A 354 ALLEL 358 (360)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99875
No 41
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.18 E-value=0.00049 Score=71.72 Aligned_cols=114 Identities=15% Similarity=0.203 Sum_probs=77.2
Q ss_pred CCCHHHHHHHHHHHH-HcCCceeeeechhHHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCc
Q 011367 2 LLSLFLRQATKDAGI-IAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHL 80 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa~-~AGl~~~~li~Ep~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 80 (487)
.+....|+.|.+.+- ..|+.-+.++.+|.||+++++. ..+-||+|+|+|+|+++.+. +|.. +........+
T Consensus 231 lnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----~ttGLVVDiG~g~T~VvPV~--eG~v-l~~ai~rL~i 302 (655)
T 4am6_A 231 IFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----STSTCVVNIGAAETRIACVD--EGTV-LEHSAITLDY 302 (655)
T ss_dssp TCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----SSCEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESC
T ss_pred CCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----CCceEEEcCCCceEEEEEEe--CCEE-Ehhheeeecc
Confidence 356778888888874 5899999999999999988864 23569999999999999984 3321 1111112579
Q ss_pred chhHHHHHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHHHHHHHHccCC
Q 011367 81 GGEDFDQRVMEYFIKLIKKKHGK-DISKDKRAIGKLRREAERAKRALSSQ 129 (487)
Q Consensus 81 GG~~id~~l~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~~e~~K~~Ls~~ 129 (487)
||+++|..|.++|..+ .|.. +...+... =...++.+|+.++..
T Consensus 303 GG~dLT~yL~kLL~~r---gypy~~~~f~t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 303 GGDDITRLFALFLLQS---DFPLQDWKIDSKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp CHHHHHHHHHHHHHHT---TCSCCSCCTTSHH---HHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHc---CCCccccCCCCcc---hHHHHHHHHHheEEE
Confidence 9999999999887653 1110 01111111 124577888888765
No 42
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.22 E-value=0.0046 Score=63.60 Aligned_cols=77 Identities=21% Similarity=0.225 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
++..+++.+.-.++..++........++.|.++||+++.|.+.+++...+ +.++..+..++.+.|.|||+.|+.-.+
T Consensus 361 ~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA~~~~g 437 (484)
T 2itm_A 361 LARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLAQIAAN 437 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHHHHHcC
Confidence 34455555554444444433212345788999999999999999999999 677766655555689999999976443
No 43
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.20 E-value=0.006 Score=63.82 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=62.1
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhh
Q 011367 148 PLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAV 227 (487)
Q Consensus 148 ~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~ 227 (487)
.-+|.++-.++..+++.+.-.++..++...-....++.|.++||++++|.+.+++...| +.++..+ ...++.|.|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 34788875556666666666555555432222346889999999999999999999999 6666554 456799999999
Q ss_pred hhhhccC
Q 011367 228 QGGILSG 234 (487)
Q Consensus 228 ~a~~~s~ 234 (487)
.|+.-.+
T Consensus 486 lA~~a~G 492 (554)
T 3l0q_A 486 MGTVAAG 492 (554)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9986444
No 44
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.15 E-value=0.0079 Score=62.66 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhc
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGIL 232 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~ 232 (487)
..++..+++.+.-.++..++..+.....++.|.++||+++.|.+.+++...| +.++..+ .+.++.|.|||+.|+.-
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a 482 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHG 482 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHH
Confidence 4566667777766667777765544556789999999999999999999999 6666544 55789999999998753
No 45
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.13 E-value=0.0075 Score=62.40 Aligned_cols=76 Identities=13% Similarity=0.130 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCC-CCCCCchhHHhhhhhhhhhhccC
Q 011367 156 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP-NKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 156 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~-~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
.++..+++.+.-.++..++.... .. ++.|.++||+++.|.+.+++...+ +.++ .. ..+.++.|.|||+.|+.-.+
T Consensus 378 ~l~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~~e~~alGaA~lA~~a~G 453 (511)
T 3hz6_A 378 QILLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVK-PDAHLHPLRGLAALAAVELE 453 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEEC-CCGGGHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEe-cCCCCchHHHHHHHHHHHhC
Confidence 34555666666655655554432 34 889999999999999999999999 6666 44 46889999999999976544
Q ss_pred C
Q 011367 235 E 235 (487)
Q Consensus 235 ~ 235 (487)
.
T Consensus 454 ~ 454 (511)
T 3hz6_A 454 W 454 (511)
T ss_dssp S
T ss_pred C
Confidence 3
No 46
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.10 E-value=0.0071 Score=62.37 Aligned_cols=76 Identities=20% Similarity=0.218 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 156 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 156 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
.++..+++.+.-.++..++...... .++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 3455566666666666666543333 6789999999999999999999999 6666544 4456999999999976443
No 47
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.91 E-value=0.0097 Score=61.45 Aligned_cols=80 Identities=13% Similarity=0.063 Sum_probs=55.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 229 (487)
+|.++ +..+++.+.-.++..++...-....++.|.++||+++.|.+.+++...| +.++..+ .+.++.|.|||+.|
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHH
Confidence 45444 4555555555444444432111235889999999999999999999999 6666553 45679999999999
Q ss_pred hhccC
Q 011367 230 GILSG 234 (487)
Q Consensus 230 ~~~s~ 234 (487)
+.-.+
T Consensus 439 ~~a~G 443 (504)
T 3ll3_A 439 RQALG 443 (504)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 76443
No 48
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.84 E-value=0.0084 Score=62.06 Aligned_cols=77 Identities=23% Similarity=0.398 Sum_probs=53.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKKA---MEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 226 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~~---l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 226 (487)
++.++ +..+++.+.-.++.. |++.+ ..++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|+|||
T Consensus 395 ~~~~l---~RAvlEgia~~~r~~l~~l~~~g---~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TRENL---ARAFVEGLLCSQRDCLELIRSLG---ASITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHHH---HHHHHHHHHHHHHHHHHHHHHTT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 45544 444444444443333 34434 45789999999999999999999999 6666543 45678999999
Q ss_pred hhhhhccC
Q 011367 227 VQGGILSG 234 (487)
Q Consensus 227 ~~a~~~s~ 234 (487)
+.|+.-.+
T Consensus 467 ~lA~~a~G 474 (515)
T 3i8b_A 467 RQAAWVLS 474 (515)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99975443
No 49
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.79 E-value=0.22 Score=47.82 Aligned_cols=77 Identities=18% Similarity=0.238 Sum_probs=46.7
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhccccC--CCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHH
Q 011367 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKK--GGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDF 85 (487)
Q Consensus 8 R~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~--~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~i 85 (487)
...+.++-+..|+++--|=.|-+|.-.+.+.... ......+|+|+|||+|.++++. ++.+.. ....++|...+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechhhHH
Confidence 3455556667899874444555554333333221 1245799999999999999986 332211 11256888877
Q ss_pred HHHH
Q 011367 86 DQRV 89 (487)
Q Consensus 86 d~~l 89 (487)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 6653
No 50
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.50 E-value=0.011 Score=62.03 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=56.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCC-CcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 228 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~ 228 (487)
+|.+ ++..+++.+.-.++..++...-....++.|.++||++ +.|.+.+++...| +.++..+ .+.++.|.|||+.
T Consensus 410 t~~~---l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEE---IYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHH---HHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHH---HHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEec-CCCccHHHHHHHH
Confidence 5554 4555555555444444443211234678999999999 9999999999999 6666443 4678999999999
Q ss_pred hhhccC
Q 011367 229 GGILSG 234 (487)
Q Consensus 229 a~~~s~ 234 (487)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 976444
No 51
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=95.49 E-value=0.0089 Score=61.80 Aligned_cols=77 Identities=21% Similarity=0.226 Sum_probs=53.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKK---AMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 226 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~---~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 226 (487)
+|.++ +..+++.+.-.++. .|++.+ ..++.|.++||+++.|.+.+++...| +.++..+.. .++.|.|||
T Consensus 371 ~~~~l---~rAvlEgia~~~~~~~~~l~~~g---~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA 442 (508)
T 3ifr_A 371 TRGHL---WRALLEAVALAFRHHVAVLDDIG---HAPQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAA 442 (508)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHT---CCCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC---CCCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHH
Confidence 45554 44444444333333 333444 35789999999999999999999999 676655443 458899999
Q ss_pred hhhhhccC
Q 011367 227 VQGGILSG 234 (487)
Q Consensus 227 ~~a~~~s~ 234 (487)
+.|+.-.+
T Consensus 443 ~lA~~a~G 450 (508)
T 3ifr_A 443 WVAAIGGG 450 (508)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHhC
Confidence 99976444
No 52
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=95.48 E-value=0.011 Score=61.00 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=54.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 228 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~ 228 (487)
+|.++ +..+++.+.-.++..++... .....++.|.++||+++.|.+.+++...| +.++..+ .+.++.|.|||+.
T Consensus 374 ~~~~l---~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 448 (501)
T 3g25_A 374 EKEHF---IRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFL 448 (501)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHH
Confidence 45444 44445544444444333211 01235789999999999999999999999 6666443 4677999999999
Q ss_pred hhhccCC
Q 011367 229 GGILSGE 235 (487)
Q Consensus 229 a~~~s~~ 235 (487)
|+.-.+.
T Consensus 449 a~~a~G~ 455 (501)
T 3g25_A 449 AGLAVGF 455 (501)
T ss_dssp HHHHTTS
T ss_pred HHHHhCc
Confidence 9865443
No 53
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=95.48 E-value=0.019 Score=59.14 Aligned_cols=75 Identities=16% Similarity=0.156 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhcc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILS 233 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s 233 (487)
++..+++.+.-.++..++... .....++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.
T Consensus 372 ~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 372 LARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALMAGVGA 447 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHHHHhhc
Confidence 344555555555555444321 12345678999999999999999999999 6666544 455699999999987543
No 54
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.47 E-value=0.046 Score=52.60 Aligned_cols=77 Identities=16% Similarity=0.085 Sum_probs=50.8
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHhccccCC-CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHH
Q 011367 8 RQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 86 (487)
Q Consensus 8 R~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y~~~~~~-~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id 86 (487)
...+..+-+..|+++--|-.|.+|...+.+..... .....+|+|+|||+|.++++. ++.+.. ....++|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccHHHHH
Confidence 34455555578999866666777765554432221 256799999999999999975 443321 223679999887
Q ss_pred HHH
Q 011367 87 QRV 89 (487)
Q Consensus 87 ~~l 89 (487)
+.+
T Consensus 175 e~~ 177 (315)
T 1t6c_A 175 ETF 177 (315)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 55
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.22 E-value=0.012 Score=61.05 Aligned_cols=52 Identities=21% Similarity=0.146 Sum_probs=42.0
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCC
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~ 235 (487)
.++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.+.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 5788999999999999999999999 6666543 45679999999999865543
No 56
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=95.22 E-value=0.014 Score=60.19 Aligned_cols=53 Identities=23% Similarity=0.275 Sum_probs=43.6
Q ss_pred CCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCC
Q 011367 181 NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235 (487)
Q Consensus 181 ~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~ 235 (487)
..++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.+.
T Consensus 402 ~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G~ 454 (506)
T 3h3n_X 402 IDIPLLKVDGGAAKNDLLMQFQADIL-DIDVQRA-ANLETTALGAAYLAGLAVGF 454 (506)
T ss_dssp SCCCEEEEESGGGGCHHHHHHHHHHH-TSEEEEC-SSSCHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEecccccCHHHHHHHHHHh-CCeEEec-CCCcchhHHHHHHHHHHhCc
Confidence 35789999999999999999999999 6666543 56779999999999765443
No 57
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.22 E-value=0.012 Score=60.79 Aligned_cols=81 Identities=16% Similarity=0.193 Sum_probs=54.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhh
Q 011367 150 TRARFEELNNDLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 228 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~ 228 (487)
+|.++ +..+++.+.-.++..++... .....++.|.++||+++.+.+.+++...+ +.++..+ .+.++.|.|||+.
T Consensus 371 ~~~~l---~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~l 445 (510)
T 2p3r_A 371 NANHI---IRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYL 445 (510)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHH
Confidence 45444 34444444444444333211 01235789999999999999999999999 6666543 4667999999999
Q ss_pred hhhccCC
Q 011367 229 GGILSGE 235 (487)
Q Consensus 229 a~~~s~~ 235 (487)
|+.-.+.
T Consensus 446 A~~a~G~ 452 (510)
T 2p3r_A 446 AGLAVGF 452 (510)
T ss_dssp HHHHHTS
T ss_pred HHHHhCc
Confidence 9765443
No 58
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.01 E-value=0.029 Score=58.22 Aligned_cols=53 Identities=23% Similarity=0.313 Sum_probs=44.1
Q ss_pred CCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccCC
Q 011367 181 NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSGE 235 (487)
Q Consensus 181 ~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~~ 235 (487)
..++.|.++||+++.|.+.+++...| +.++..+ .+.++.|.|||+.|+.-.+.
T Consensus 401 ~~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~lA~~a~G~ 453 (526)
T 3ezw_A 401 IRLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVGF 453 (526)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999 6766554 45678999999999865554
No 59
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.93 E-value=0.021 Score=59.00 Aligned_cols=51 Identities=27% Similarity=0.373 Sum_probs=42.4
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
.++.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 4678999999999999999999999 6666543 4567999999999976443
No 60
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.92 E-value=0.019 Score=59.31 Aligned_cols=51 Identities=22% Similarity=0.249 Sum_probs=41.9
Q ss_pred Cc-CEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhhccC
Q 011367 182 QI-DEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGILSG 234 (487)
Q Consensus 182 ~i-~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~~s~ 234 (487)
.+ +.|.++||+++.|.+.+++...+ +.++..+ .+.++.|.|||+.|+.-.+
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~la~~~~G 457 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAVLAGLEVK 457 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHHHHHHHhC
Confidence 35 78999999999999999999999 6666543 4556999999999976443
No 61
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.47 E-value=0.033 Score=57.22 Aligned_cols=48 Identities=23% Similarity=0.249 Sum_probs=38.7
Q ss_pred CCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 181 NQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 181 ~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
..++.|.++||++++|.+.+++...+ +.++.... .++.|.|||+.|..
T Consensus 392 ~~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 392 EDFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHHHHHHH
Confidence 34688999999999999999999999 66665432 58999999665543
No 62
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=92.98 E-value=2.2 Score=40.96 Aligned_cols=65 Identities=18% Similarity=0.213 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcC--CCCCCCCC---CchhHHhhhhhhhhhh
Q 011367 162 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGI 231 (487)
Q Consensus 162 ~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~--~~~~~~~~---~p~~aVa~GAa~~a~~ 231 (487)
.+.+...+.++.+.. .++.|+|+||.+....+++.|.+.+. +.++..+. --|.+++.|+|.+...
T Consensus 229 ~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 229 FAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 333444445554443 35789999999999999999998762 23343332 2367888888876543
No 63
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.10 E-value=0.16 Score=51.85 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=53.1
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhh-cCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 155 EELNNDLFRK--TMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY-FDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 155 e~~~~~~~~~--~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~-f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
..++..+++. +.-.++..++... ..+.|.++||++++|.+.+++... | +.++..+. ..++.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4566666664 5555666666533 127899999999999999999999 9 66665553 456889999999974
No 64
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=90.69 E-value=0.28 Score=47.68 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=47.4
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHh-ccccCC----CCcEEEEEEeCCCeEEEEEEEE--eC--CeEEEEEecCCC
Q 011367 8 RQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG----GEKNILVFDLGGGTFDVSILTI--DN--GVFEVLSTNGDT 78 (487)
Q Consensus 8 R~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y-~~~~~~----~~~~vlv~D~GggT~dvsv~~~--~~--~~~~v~~~~~~~ 78 (487)
...+..+-+..|+++ .+|+-.+=|.+.| +..... ....++|+|+|||+|.++++.- .. +.+ . .....
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~-~~~Sl 180 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--Q-GAFSM 180 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--S-EEEEE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCccccc--c-eeEEE
Confidence 345555666679986 6665555444444 332111 2356999999999999999764 22 111 0 11225
Q ss_pred CcchhHHHHHH
Q 011367 79 HLGGEDFDQRV 89 (487)
Q Consensus 79 ~lGG~~id~~l 89 (487)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 69999887765
No 65
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=89.16 E-value=0.66 Score=47.67 Aligned_cols=75 Identities=23% Similarity=0.318 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCceeeeechhHHHHHHh-ccccCC-CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHH
Q 011367 9 QATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKG-GEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 86 (487)
Q Consensus 9 ~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y-~~~~~~-~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id 86 (487)
..+.++-+..|+++ .+|+-.+=|.+.| +..... .....+|+|+|||+|.+++.. ++.+... ...++|...+.
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~~~~---~Sl~lG~vrlt 173 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEPILV---ESRRMGCVSFA 173 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEEEEE---EEESCCHHHHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCeeeEE---EEEeccHHHHH
Confidence 44444555578886 6665555444444 332211 122699999999999999874 4443221 12578998887
Q ss_pred HHH
Q 011367 87 QRV 89 (487)
Q Consensus 87 ~~l 89 (487)
+.+
T Consensus 174 e~f 176 (513)
T 1u6z_A 174 QLY 176 (513)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 66
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=88.93 E-value=0.48 Score=48.65 Aligned_cols=75 Identities=17% Similarity=0.255 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCceeeeechhHHHHHHh-ccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHH
Q 011367 8 RQATKDAGIIAGLNVARIINEPTAAAIAY-GLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFD 86 (487)
Q Consensus 8 R~a~~~Aa~~AGl~~~~li~Ep~Aaa~~y-~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id 86 (487)
...+.++-+..|+++ .+|+-.+=|.+.| +..........+|+|+|||+|.++++. ++.+. .....++|.-.+.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~~---~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSCG---EGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEEC---CCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCeee---eEEEecceEEehh
Confidence 345556666789986 6665554444433 332222223459999999999999986 33321 1122568887776
Q ss_pred HH
Q 011367 87 QR 88 (487)
Q Consensus 87 ~~ 88 (487)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 67
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=86.19 E-value=1.7 Score=42.15 Aligned_cols=73 Identities=14% Similarity=0.189 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCC----CCCCchhHHhhhhhhhhhh
Q 011367 156 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN----KGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 156 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~----~~~~p~~aVa~GAa~~a~~ 231 (487)
++...+.+=+...|.+.++... ..++.|+++||+++.|.+-++|++.+++..+. ..++|+.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 4444455555556666665532 24678999999999999999999999654432 1234554444445666654
No 68
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=81.59 E-value=2.5 Score=40.73 Aligned_cols=68 Identities=18% Similarity=0.205 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcC--CCCCCCCC---CchhHHhhhhhhhhhhcc
Q 011367 161 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNKGV---NPDEAVAYGAAVQGGILS 233 (487)
Q Consensus 161 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~--~~~~~~~~---~p~~aVa~GAa~~a~~~s 233 (487)
+.+.+...+.++++..+ ++.|+|+||.++..++++.|.+.+. +.++..+. -.|.+++.|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44445555666666544 5789999999999999999988763 22333222 347889999987654433
No 69
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=81.20 E-value=3 Score=40.49 Aligned_cols=71 Identities=23% Similarity=0.342 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCC----CCCCch--hHHhhhhhhh
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPN----KGVNPD--EAVAYGAAVQ 228 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~----~~~~p~--~aVa~GAa~~ 228 (487)
+++...+.+=+...|.+.+.... .++.|+++||+++.|.+-++|++.+++.++. ..++|+ ||+|. |+.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHH
Confidence 35555555556666666766542 4568999999999999999999999654332 123444 55555 566
Q ss_pred hhh
Q 011367 229 GGI 231 (487)
Q Consensus 229 a~~ 231 (487)
|..
T Consensus 340 A~~ 342 (370)
T 3cqy_A 340 AMR 342 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 70
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=80.37 E-value=1.9 Score=46.30 Aligned_cols=52 Identities=25% Similarity=0.282 Sum_probs=38.7
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcC--CCCCCC---CCCchhHHhhhhhhhhhhcc
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFD--GKEPNK---GVNPDEAVAYGAAVQGGILS 233 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~--~~~~~~---~~~p~~aVa~GAa~~a~~~s 233 (487)
.++.|+|+||.++..++++.|.+.+. +.++.. ..--|-++|.|.|++|....
T Consensus 693 g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 693 GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 35789999999999999999988762 222222 12248899999999886543
No 71
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=80.19 E-value=33 Score=35.06 Aligned_cols=42 Identities=21% Similarity=0.404 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcC
Q 011367 161 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD 207 (487)
Q Consensus 161 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~ 207 (487)
+++-+...+.++++..+ ++.|+|+||.+....+++.+.+...
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 34444555566666544 5789999999999999999998763
No 72
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=79.77 E-value=3.1 Score=43.78 Aligned_cols=50 Identities=18% Similarity=0.181 Sum_probs=38.5
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCC---CCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK---GVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~---~~~p~~aVa~GAa~~a~~ 231 (487)
.++.|+|+||.++..++++.|.+.+.+.++.. ..--|-++|.|.|+.|+.
T Consensus 599 g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 599 GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 46799999999999999999998874333322 233489999999998853
No 73
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=78.86 E-value=2.3 Score=39.97 Aligned_cols=49 Identities=14% Similarity=0.196 Sum_probs=37.5
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
+++.|+|.||.+..|.+.+.+++.++..++..+. .+.+.+.||+..+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 5678999999987788888888887544454444 567899999988753
No 74
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=78.79 E-value=3.7 Score=44.20 Aligned_cols=61 Identities=15% Similarity=0.299 Sum_probs=43.6
Q ss_pred HHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCC--CCCCCC---CchhHHhhhhhhhhhh
Q 011367 166 MGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK--EPNKGV---NPDEAVAYGAAVQGGI 231 (487)
Q Consensus 166 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~--~~~~~~---~p~~aVa~GAa~~a~~ 231 (487)
...+.++.++. .++.|+|+||.+....+++.|.+.+... ++..+. --|..+|.|+|++|+.
T Consensus 694 ~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~ 759 (772)
T 4g9i_A 694 AHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGL 759 (772)
T ss_dssp HHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHH
Confidence 34444444443 3678999999999999999999987432 343332 2388999999988864
No 75
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=78.28 E-value=3.4 Score=40.04 Aligned_cols=56 Identities=20% Similarity=0.223 Sum_probs=34.5
Q ss_pred HHHHHHHHHHH-c-------CCceeeeechhHHHHHHh-----ccccC--CCCcEEEEEEeCCCeEEEEEEE
Q 011367 7 LRQATKDAGII-A-------GLNVARIINEPTAAAIAY-----GLDKK--GGEKNILVFDLGGGTFDVSILT 63 (487)
Q Consensus 7 qR~a~~~Aa~~-A-------Gl~~~~li~Ep~Aaa~~y-----~~~~~--~~~~~vlv~D~GggT~dvsv~~ 63 (487)
+++.+.++++. . |+. +++|+-.+=|.+.| .+..- ...++++|+|+|||+|.++...
T Consensus 88 ~~~~~l~~v~~~~~~~~~~~g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 88 QQKKYYDELEYWFRQQSQWQLVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCCCCCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEec
Confidence 45555555544 4 665 47776554444433 33221 1235799999999999999873
No 76
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=71.95 E-value=9.1 Score=35.59 Aligned_cols=50 Identities=22% Similarity=0.122 Sum_probs=32.9
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCC-----------CCCCCCCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDG-----------KEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~-----------~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
+++.|+|.||.+..|.+.+.+++.+.. .++..+.-.+.+.+.||+..+..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 467899999988777776666654411 12222334567899999988753
No 77
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=71.31 E-value=8.7 Score=39.68 Aligned_cols=69 Identities=19% Similarity=0.184 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCC-CCCchhHHhhhhhhhhhhccCC
Q 011367 162 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNK-GVNPDEAVAYGAAVQGGILSGE 235 (487)
Q Consensus 162 ~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~-~~~p~~aVa~GAa~~a~~~s~~ 235 (487)
.+-+...+.++.+..+ ++.|.|.||.+....+++.|.+..+-..+.. +.--|.+++.|+|+++....+.
T Consensus 292 ~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 292 ERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 3334455555555543 6799999999999999999987642212222 2345899999999998765443
No 78
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=70.03 E-value=9.1 Score=38.43 Aligned_cols=57 Identities=18% Similarity=0.218 Sum_probs=34.5
Q ss_pred HHHHHHHHHHH-c---CC--ceeeeechhHHHHHHh-----ccccC-----------CCCcEEEEEEeCCCeEEEEEEE
Q 011367 7 LRQATKDAGII-A---GL--NVARIINEPTAAAIAY-----GLDKK-----------GGEKNILVFDLGGGTFDVSILT 63 (487)
Q Consensus 7 qR~a~~~Aa~~-A---Gl--~~~~li~Ep~Aaa~~y-----~~~~~-----------~~~~~vlv~D~GggT~dvsv~~ 63 (487)
+++.+.++++. . |+ ..+++|+-.+=|.+.| .+..- .....++|+|+|||+|.++...
T Consensus 130 n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 130 ATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 34444444433 3 44 3568887665555444 33211 0135689999999999999874
No 79
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=69.89 E-value=3.4 Score=39.45 Aligned_cols=71 Identities=11% Similarity=0.081 Sum_probs=37.8
Q ss_pred cHHHHHHHHHHHHHHHHHH----HHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCC---CCCCCchhHHh
Q 011367 150 TRARFEELNNDLFRKTMGP----VKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEP---NKGVNPDEAVA 222 (487)
Q Consensus 150 tr~~fe~~~~~~~~~~~~~----i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~---~~~~~p~~aVa 222 (487)
+.++.+++.+.+.++.++. +.+++.+.+ +..|+.+||+ +++...+.+.++-..+ ..+.+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 5566666666555554444 445554433 3379999987 4565555443311100 00123456677
Q ss_pred hhhhhh
Q 011367 223 YGAAVQ 228 (487)
Q Consensus 223 ~GAa~~ 228 (487)
.|+|+.
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888854
No 80
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=69.78 E-value=8.8 Score=36.39 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCc-HHHHHHHHhhcC---------CCCCCCCCCchhHHhhhhhhhh
Q 011367 160 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRI-PKVQQLLKDYFD---------GKEPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 160 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~i-p~v~~~l~~~f~---------~~~~~~~~~p~~aVa~GAa~~a 229 (487)
.++++....+-..+...- ..-+++.|+|-||.++. +.+.+.|++.+. ..++....-.+.+.++|||.++
T Consensus 239 ~~~~~~~~~La~~i~~l~-~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 239 AVWADIGTIIGESLVNIV-RVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 344444444444443210 11346889999999886 666666655441 1234445566789999999877
Q ss_pred h
Q 011367 230 G 230 (487)
Q Consensus 230 ~ 230 (487)
.
T Consensus 318 ~ 318 (321)
T 3r8e_A 318 M 318 (321)
T ss_dssp H
T ss_pred H
Confidence 4
No 81
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=66.85 E-value=9.6 Score=36.27 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCC--------CCCCCCCchhHHhhhhhhhh
Q 011367 161 LFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGK--------EPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 161 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~--------~~~~~~~p~~aVa~GAa~~a 229 (487)
++++....+-..+...- ..-+++.|+|-||.+..+.+.+.|++.+... ++....-.+.+.++|||..+
T Consensus 249 ~~~~~~~~La~~i~~l~-~~l~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 249 HVERFMELLAICFGNIF-TANDPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH-HHhCCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 44444444444443221 1134678999999998887777777766321 12223345789999999776
No 82
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=65.17 E-value=14 Score=34.93 Aligned_cols=50 Identities=22% Similarity=0.217 Sum_probs=33.9
Q ss_pred CcCEEEEEcCCCC-cHHHHHHHHhhcCC---------CCCCCCCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTR-IPKVQQLLKDYFDG---------KEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~-ip~v~~~l~~~f~~---------~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
+++.|+|.||.+. .|.+.+.+++.+.. .++..+...+.+.+.|||..+..
T Consensus 262 ~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 262 NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 3578999999886 57777777665521 12233335667899999988754
No 83
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=64.38 E-value=11 Score=35.31 Aligned_cols=50 Identities=20% Similarity=0.133 Sum_probs=36.0
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCC-----CCCCCCCchhHHhhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGK-----EPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~-----~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
+++.|+|-||.+..|.+.+.|++.+... .+....-.+.+.+.||+..+..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4678999999998887878887776321 2233344567999999988753
No 84
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=58.65 E-value=61 Score=25.23 Aligned_cols=55 Identities=16% Similarity=0.174 Sum_probs=41.6
Q ss_pred cCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 011367 414 KLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 472 (487)
Q Consensus 414 ~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~r~~~~~~~~~~ 472 (487)
.+-...++.+...|++-.+-++. ..+.++.++..++.....+...+++..++.|+
T Consensus 62 vfv~~~~~ea~~~L~~~~e~ie~----~i~~le~~~~~l~~~l~~lk~~l~~~~~~~~~ 116 (117)
T 2zqm_A 62 LIVKTTKDKAVAELKEKIETLEV----RLNALERQEKKLNEKLKELTAQIQSALRPPTA 116 (117)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred HHhhccHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 44455677777788887777766 47788899999999999999888888776554
No 85
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=58.57 E-value=9.7 Score=35.31 Aligned_cols=48 Identities=17% Similarity=0.162 Sum_probs=32.9
Q ss_pred CcCEEEEEcCCCCcHHHHHHHHhhcCCC------CCCCCCCchhHHhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRIPKVQQLLKDYFDGK------EPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 182 ~i~~V~LvGG~s~ip~v~~~l~~~f~~~------~~~~~~~p~~aVa~GAa~~a 229 (487)
+++.|+|.||.+..|.+.+.+++.+... ++..+...+.+.+.|||..+
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 4568999998887777888887766321 12223345678999999876
No 86
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=57.08 E-value=21 Score=33.70 Aligned_cols=43 Identities=26% Similarity=0.345 Sum_probs=28.7
Q ss_pred cCCceeeeechhHHHHHHhccccC-CCCcEEEEEEeCCCeEEEEEE
Q 011367 18 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 62 (487)
Q Consensus 18 AGl~~~~li~Ep~Aaa~~y~~~~~-~~~~~vlv~D~GggT~dvsv~ 62 (487)
.|++ +.+.|+..|||++....-. ...++++++-+|.| +=.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 3775 6899999999987433211 23467888888887 444444
No 87
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=56.98 E-value=7.3 Score=36.63 Aligned_cols=64 Identities=14% Similarity=0.082 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCC--cHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhh
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTR--IPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~--ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
.+..++++....+-..+...-. . +++.|+|.||.+. .|.+.+.+++.+ . .|+.+.+.||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-----c---CCCCCHHHHHHHHHh
Confidence 3445666666666666655422 2 6788999999864 566777776653 1 256778999999875
No 88
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=55.46 E-value=39 Score=34.02 Aligned_cols=25 Identities=24% Similarity=0.549 Sum_probs=21.7
Q ss_pred CCcEEEEEEeCCCeEEEEEEEEeCC
Q 011367 43 GEKNILVFDLGGGTFDVSILTIDNG 67 (487)
Q Consensus 43 ~~~~vlv~D~GggT~dvsv~~~~~~ 67 (487)
....+|.+|+||.++-+.++.+.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 3457999999999999999999764
No 89
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=55.32 E-value=22 Score=35.45 Aligned_cols=57 Identities=21% Similarity=0.269 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHc----CC--ceeeeechhHHHHHH-----hccccCC--CCcEEEEEEeCCCeEEEEEEE
Q 011367 7 LRQATKDAGIIA----GL--NVARIINEPTAAAIA-----YGLDKKG--GEKNILVFDLGGGTFDVSILT 63 (487)
Q Consensus 7 qR~a~~~Aa~~A----Gl--~~~~li~Ep~Aaa~~-----y~~~~~~--~~~~vlv~D~GggT~dvsv~~ 63 (487)
+++++.++++.. |+ ..+++|+-.+=|.+. |.+..-. ....+.++|+|||++.++...
T Consensus 130 ~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 130 SADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp HHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 444555554432 44 346788655544433 3332211 135688999999999998664
No 90
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=55.08 E-value=25 Score=32.87 Aligned_cols=49 Identities=20% Similarity=0.150 Sum_probs=31.4
Q ss_pred CcCEEEEEcCCC-Cc-HHHHHHHHhhcCC-------CCCCCCCCchhHHhhhhhhhhh
Q 011367 182 QIDEIVLVGGST-RI-PKVQQLLKDYFDG-------KEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 182 ~i~~V~LvGG~s-~i-p~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
+++.|+|-||.+ .. |.+.+.|++.+.. ..+..+.-.+.+.++|||..+.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 467899999887 54 5555555554411 1123334457899999998874
No 91
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=54.76 E-value=26 Score=32.89 Aligned_cols=50 Identities=20% Similarity=0.233 Sum_probs=33.6
Q ss_pred CCcCEEEEEcCCCCc-----HHHHHHHHhhcCC------CCCCCCCCchhHHhhhhhhhhh
Q 011367 181 NQIDEIVLVGGSTRI-----PKVQQLLKDYFDG------KEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 181 ~~i~~V~LvGG~s~i-----p~v~~~l~~~f~~------~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
-+++.|+|-||.++. +.+++.+++.+.. .++....-.+.+.++|||..+.
T Consensus 238 ~dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 238 FDPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp HCCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred hCCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 356889999998875 4677777766521 1122233456889999998874
No 92
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=53.22 E-value=4.6 Score=37.78 Aligned_cols=67 Identities=9% Similarity=-0.097 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcC-CcCEEEEEcCCCCc--HHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKN-QIDEIVLVGGSTRI--PKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~-~i~~V~LvGG~s~i--p~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
....++++....+-..+ . +... +++.|+|.||.+.. |.+++.+++... ++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHh
Confidence 44455566666666665 2 2223 67899999998876 667776665431 12 24668899999999864
No 93
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=52.91 E-value=10 Score=37.12 Aligned_cols=50 Identities=22% Similarity=0.173 Sum_probs=34.1
Q ss_pred CCcCEEEEEcCCCCcHH-HHHHHHhhcCCC---CCCCCCCchhHHhhhhhhhhh
Q 011367 181 NQIDEIVLVGGSTRIPK-VQQLLKDYFDGK---EPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 181 ~~i~~V~LvGG~s~ip~-v~~~l~~~f~~~---~~~~~~~p~~aVa~GAa~~a~ 230 (487)
.+++.|+|.||.+..+. +.+.|.+.+... .+........+.+.||+..+.
T Consensus 294 ~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 294 GEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp TCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 36789999999987544 778887777321 122233344699999998764
No 94
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=51.16 E-value=67 Score=32.05 Aligned_cols=26 Identities=19% Similarity=0.493 Sum_probs=22.5
Q ss_pred CCcEEEEEEeCCCeEEEEEEEEeCCe
Q 011367 43 GEKNILVFDLGGGTFDVSILTIDNGV 68 (487)
Q Consensus 43 ~~~~vlv~D~GggT~dvsv~~~~~~~ 68 (487)
....++.+|+||.++-+.++...+..
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~ 84 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQ 84 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTE
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCe
Confidence 45678999999999999999988765
No 95
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=49.90 E-value=1.5e+02 Score=28.86 Aligned_cols=57 Identities=12% Similarity=0.108 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCC-CcHHHHHHHHhhcCCCCCCCCCCchh
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYFDGKEPNKGVNPDE 219 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~ip~v~~~l~~~f~~~~~~~~~~p~~ 219 (487)
.++-++.++...|-...... ..+|.|+++||-+ +.+.|++.|.+.+.- +-..+||..
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l~~--lGi~lD~~~ 359 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGLGG--LGIEIDDAL 359 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTCGG--GTCCBCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHHhh--cCeEecHHH
Confidence 33444455555554443332 4699999999998 578899999887632 223456543
No 96
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=46.37 E-value=36 Score=32.92 Aligned_cols=51 Identities=4% Similarity=-0.006 Sum_probs=30.9
Q ss_pred CcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcchhHHHHHHHHHHH
Q 011367 44 EKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLGGEDFDQRVMEYFI 94 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~~~ 94 (487)
...++.+|+|+..+.+.++......+...........+...+-..+.+.+.
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~~~~~~~~~~~~l~~~i~ 136 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPLPSQSDREETLNVMYRIID 136 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEccCCCCCHHHHHHHHHHHHH
Confidence 357899999999999999987655443333333222244444444444443
No 97
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=46.23 E-value=39 Score=35.25 Aligned_cols=62 Identities=15% Similarity=0.258 Sum_probs=47.1
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHH-hhcCC
Q 011367 146 SEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLK-DYFDG 208 (487)
Q Consensus 146 ~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~-~~f~~ 208 (487)
.+.||..++.++.. .-.-+..-++-+|+++++...+|+.|+|.||++.-=-+.+.+. -.+|.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~iGllP~ 561 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAITIGLLPD 561 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHHHTSSCC
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhhcCCCCC
Confidence 47889999988643 2334556677888999999999999999999988766666664 44443
No 98
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=45.33 E-value=12 Score=35.48 Aligned_cols=47 Identities=21% Similarity=0.239 Sum_probs=27.9
Q ss_pred CcCEEEEEcCCCCc-HHHHHHHHhhcCCC--------CCCCCCCchhHHhhhhhhhh
Q 011367 182 QIDEIVLVGGSTRI-PKVQQLLKDYFDGK--------EPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 182 ~i~~V~LvGG~s~i-p~v~~~l~~~f~~~--------~~~~~~~p~~aVa~GAa~~a 229 (487)
+++.|+|.||.+.. +++.+ +++.+... ++..+.-.+.+.+.|||..+
T Consensus 269 ~p~~IvlgG~i~~~~~~~~~-l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 269 DPDLLVIGGGLSNFTAITTQ-LAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp CCSEEEEESGGGGSTHHHHS-SGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred CCCEEEEeChhhcchhHHHH-HHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 45678888888764 44443 55554211 11122234578899999876
No 99
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=44.54 E-value=2e+02 Score=27.75 Aligned_cols=25 Identities=16% Similarity=0.432 Sum_probs=22.6
Q ss_pred CcCEEEEEcCCC-CcHHHHHHHHhhc
Q 011367 182 QIDEIVLVGGST-RIPKVQQLLKDYF 206 (487)
Q Consensus 182 ~i~~V~LvGG~s-~ip~v~~~l~~~f 206 (487)
.+|.|+++||-+ ..+.+|+.+.+.+
T Consensus 313 gvDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 313 KLDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp SCCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred CCCEEEECCccccCcHHHHHHHHhhc
Confidence 699999999988 7799999998876
No 100
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=44.41 E-value=10 Score=39.56 Aligned_cols=25 Identities=36% Similarity=0.755 Sum_probs=22.6
Q ss_pred cCEEEEEcCCCCcHHHHHHHHhhcC
Q 011367 183 IDEIVLVGGSTRIPKVQQLLKDYFD 207 (487)
Q Consensus 183 i~~V~LvGG~s~ip~v~~~l~~~f~ 207 (487)
.+.|++|||+|.+|.+.-.|.+...
T Consensus 501 y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 501 YSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp HTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred hhcEEEEcCcccCccHHHHHHHHHH
Confidence 5789999999999999999998883
No 101
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=43.64 E-value=37 Score=31.74 Aligned_cols=50 Identities=16% Similarity=0.086 Sum_probs=32.1
Q ss_pred CCcCEEEEEcCCCCcH----HHHHHHHhhcCC------------CCCCCCCCchhHHhhhhhhhhh
Q 011367 181 NQIDEIVLVGGSTRIP----KVQQLLKDYFDG------------KEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 181 ~~i~~V~LvGG~s~ip----~v~~~l~~~f~~------------~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
-+++.|+|-||.++.+ .+++.+.+.... ..+....-.+.|.++|||.++.
T Consensus 223 ldPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 223 LAPXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp TCCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred HCchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 3578899999988754 455555554311 1123334456899999998874
No 102
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=43.55 E-value=30 Score=32.42 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcC
Q 011367 156 ELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFD 207 (487)
Q Consensus 156 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~ 207 (487)
++++.....+...++++|+++++++.+|++|+.-|+++++ -+.+.+.|+
T Consensus 211 ~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 211 EVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 3445556677889999999999999999999999988765 456777773
No 103
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=41.63 E-value=4.9 Score=37.61 Aligned_cols=67 Identities=7% Similarity=-0.049 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhhhh
Q 011367 160 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGGI 231 (487)
Q Consensus 160 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 231 (487)
.++++....+-..+ ...+ ..+++.|+|.||.+.. +.+.|++.+....+ ....|..+.+.||++++..
T Consensus 212 ~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~-~i~~~~~a~~~GAa~la~~ 278 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGI-QIGKILQSPMEGLIQYHSQ 278 (291)
T ss_dssp HHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTC-CEEEECSCTHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCc-EEeecCCCHHHHHHHHHHH
Confidence 44555555555554 2211 1267889999998775 55666666632111 1223457888999988753
No 104
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=41.41 E-value=72 Score=31.93 Aligned_cols=24 Identities=33% Similarity=0.703 Sum_probs=20.8
Q ss_pred CcEEEEEEeCCCeEEEEEEEEeCC
Q 011367 44 EKNILVFDLGGGTFDVSILTIDNG 67 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~~~ 67 (487)
...+|.+|+||.+|-|..+++.+.
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~ 99 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEG 99 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC-
T ss_pred ceEEEEEEecCceEEEEEEEECCC
Confidence 457999999999999999999764
No 105
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=38.89 E-value=1e+02 Score=32.11 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=62.2
Q ss_pred EEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCC--cchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHH
Q 011367 46 NILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTH--LGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAERAK 123 (487)
Q Consensus 46 ~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~--lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 123 (487)
.=+.+|+|..|+-+.++.+..+..--.....+.+ .|.+=+++.-+.. +
T Consensus 207 ~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~-------~----------------------- 256 (631)
T 3zyy_X 207 FGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVD-------E----------------------- 256 (631)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHH-------H-----------------------
T ss_pred eEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHh-------c-----------------------
Confidence 4478999998888888888777543333333333 5555554432110 0
Q ss_pred HHccCCceeEEeeecccCCceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHH
Q 011367 124 RALSSQHQVRVEIESLFDGIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKV 198 (487)
Q Consensus 124 ~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v 198 (487)
+..-.+++-+-+++.+-.++.+++.++++.+.+|..+.++|-.+..-.+
T Consensus 257 --------------------------~~~g~~~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~hLl 305 (631)
T 3zyy_X 257 --------------------------NPDGAEKLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMTHLF 305 (631)
T ss_dssp --------------------------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHH
T ss_pred --------------------------CcccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHHHHH
Confidence 0011233444456667778888888899999999999999987655444
No 106
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=37.81 E-value=16 Score=34.73 Aligned_cols=72 Identities=14% Similarity=0.022 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcC--------EEEEEcCCCCc-HHHHHHHHhhcCCC----------CCCCCCCch
Q 011367 158 NNDLFRKTMGPVKKAMEDAGLEKNQID--------EIVLVGGSTRI-PKVQQLLKDYFDGK----------EPNKGVNPD 218 (487)
Q Consensus 158 ~~~~~~~~~~~i~~~l~~~~~~~~~i~--------~V~LvGG~s~i-p~v~~~l~~~f~~~----------~~~~~~~p~ 218 (487)
+..++++....+-..+...- ..-+++ .|+|.||.+.. |.+.+.+++.+... ++......+
T Consensus 234 a~~il~~~~~~La~~i~~l~-~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~ 312 (347)
T 2ch5_A 234 SRYIFRKAGEMLGRHIVAVL-PEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRH 312 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHG-GGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCC
Confidence 33455555555555554321 122345 78888888753 66666666554211 111111223
Q ss_pred hHHhhhhhhhhhh
Q 011367 219 EAVAYGAAVQGGI 231 (487)
Q Consensus 219 ~aVa~GAa~~a~~ 231 (487)
+.+.||+..+..
T Consensus 313 -a~~~GAa~la~~ 324 (347)
T 2ch5_A 313 -SSALGGASLGAR 324 (347)
T ss_dssp -CTHHHHHHHHHH
T ss_pred -ChHHHHHHHHHH
Confidence 889999988754
No 107
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=37.65 E-value=68 Score=30.30 Aligned_cols=43 Identities=23% Similarity=0.225 Sum_probs=27.1
Q ss_pred cCCceeeeechhHHHHHHhccccC-CCCcEEEEEEeCCCeEEEEEE
Q 011367 18 AGLNVARIINEPTAAAIAYGLDKK-GGEKNILVFDLGGGTFDVSIL 62 (487)
Q Consensus 18 AGl~~~~li~Ep~Aaa~~y~~~~~-~~~~~vlv~D~GggT~dvsv~ 62 (487)
.|++ +.+.|+..|||++...... ....+++++-+|.| +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3665 5788999999887533221 13456788888877 334444
No 108
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=37.56 E-value=90 Score=25.94 Aligned_cols=46 Identities=17% Similarity=0.293 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 011367 419 EKDKIETAVKEALEWLDDN---QSAEKEDYEEKLKEVEAVCNPIITAVY 464 (487)
Q Consensus 419 e~~~i~~~l~e~~~WL~~~---~~a~~e~~~~kl~eL~~~~~pi~~r~~ 464 (487)
+|..+..+|.++....... .....++|+.|+..++++...+...+.
T Consensus 97 dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~vkkeL~~hi~ 145 (152)
T 4fla_A 97 DRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQ 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5667777777776665543 123578899999999988888877654
No 109
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=36.14 E-value=44 Score=31.01 Aligned_cols=45 Identities=16% Similarity=0.275 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 159 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 159 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+.....+...++++|+++++++.+|++|++-|+++++ -+.+.+.|
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~l 250 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKL 250 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 3445667788999999999999999999999988764 34567777
No 110
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=35.66 E-value=3.2e+02 Score=26.66 Aligned_cols=44 Identities=16% Similarity=0.336 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCC-CcHHHHHHHHhhc
Q 011367 159 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYF 206 (487)
Q Consensus 159 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~ip~v~~~l~~~f 206 (487)
+-++.++.+.|-.... -+ ..+|.|+++||.+ ..+.||+.+.+.+
T Consensus 311 d~f~yri~k~IGa~aa--~L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 311 KTFVHRIARHIAGHAA--SL--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHT--TC--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH--Hh--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 3344444444443332 22 5699999999999 9999999999877
No 111
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=34.67 E-value=33 Score=33.07 Aligned_cols=18 Identities=17% Similarity=0.159 Sum_probs=14.7
Q ss_pred cCCceeeeechhHHHHHH
Q 011367 18 AGLNVARIINEPTAAAIA 35 (487)
Q Consensus 18 AGl~~~~li~Ep~Aaa~~ 35 (487)
.|+.++.+.|+-.|||++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 355467899999999988
No 112
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=32.77 E-value=46 Score=27.83 Aligned_cols=60 Identities=22% Similarity=0.343 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHcC-CCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhhh
Q 011367 160 DLFRKTMGPVKKAMEDAG-LEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQG 229 (487)
Q Consensus 160 ~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 229 (487)
.+.+++.+-..+.|.+.+ ....+|+ ++-|=|+-.+|+.-+.+.+.- +.|-.|+.||++.+
T Consensus 25 ~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~~---------~yDavIaLG~VIrG 85 (156)
T 3nq4_A 25 FINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKSG---------KYDAVVALGTVIRG 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHHC---------SCSEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhcC---------CCCEEEEeeeeecC
Confidence 345555666677778888 7666777 778889999999998886541 23455666666554
No 113
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=32.73 E-value=39 Score=30.54 Aligned_cols=75 Identities=11% Similarity=0.164 Sum_probs=36.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhh-hhhhc---cCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 011367 387 KIDARNSLETYVYNMKNQINDK-DKLAD---KLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIIT 461 (487)
Q Consensus 387 ~~~a~N~LE~~iy~~r~~l~~~-~~~~~---~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi~~ 461 (487)
..+.+..|..|.-.+|..+... +.+.. -..++-+.++...++++.+|+...-..-.+.+.....+|+..+.|...
T Consensus 134 ~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~~e~~~kl~~~~e~lr~~l~p~~e 212 (243)
T 2a01_A 134 LHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARLAEYHAKATEHLSTLSEKAKPALE 212 (243)
T ss_dssp HHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3444555555555555554321 01111 134556677777888888888643111122233334455554444443
No 114
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=32.35 E-value=1.4e+02 Score=29.52 Aligned_cols=23 Identities=35% Similarity=0.660 Sum_probs=20.9
Q ss_pred CcEEEEEEeCCCeEEEEEEEEeC
Q 011367 44 EKNILVFDLGGGTFDVSILTIDN 66 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~~ 66 (487)
...++.+|+||.++-+.++.+.+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 46789999999999999999976
No 115
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=32.31 E-value=37 Score=31.81 Aligned_cols=47 Identities=21% Similarity=0.190 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+++.....+...++++|+++++++.+|++|+.-|+++++ -+.+.+.|
T Consensus 214 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 260 (322)
T 1ub7_A 214 VFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERL 260 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 334455677888999999999999999999999988664 45677777
No 116
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=31.72 E-value=48 Score=32.28 Aligned_cols=49 Identities=10% Similarity=0.089 Sum_probs=30.9
Q ss_pred CcCEEEEEcCCCC-cHHHHHHHHhhcC---------CCCCCCCCCchhHHhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTR-IPKVQQLLKDYFD---------GKEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 182 ~i~~V~LvGG~s~-ip~v~~~l~~~f~---------~~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
+++.|+|.||.+. .|.+.+.+++.+. ..++......+.+.++|||+...
T Consensus 334 dP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~ 392 (406)
T 1z6r_A 334 NPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKD 392 (406)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHH
T ss_pred CCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHH
Confidence 4678999999876 4666666655441 11233333456789999987654
No 117
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=31.58 E-value=41 Score=31.32 Aligned_cols=47 Identities=17% Similarity=0.197 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+.+.....+...++++|+++++++.+|++|++-++++++ -+.+.+.|
T Consensus 206 ~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~l 252 (313)
T 1zow_A 206 VFKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERL 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHh
Confidence 334455677888999999999999999999999988654 34566666
No 118
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=31.12 E-value=43 Score=31.59 Aligned_cols=47 Identities=15% Similarity=0.302 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+++-....+...++++|+++++++.+|++|+.-++++++ -+.+.+.|
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~l 264 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQL 264 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHc
Confidence 334445677788999999999999999999999988764 34566666
No 119
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=30.51 E-value=1.5e+02 Score=28.52 Aligned_cols=69 Identities=13% Similarity=0.295 Sum_probs=50.1
Q ss_pred HhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Q 011367 390 ARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPI 459 (487)
Q Consensus 390 a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~~~~a~~e~~~~kl~eL~~~~~pi 459 (487)
++...++++|.+--.+.-+ ++...+...+..+.+.+++++.+||..-.++-..+++...+......++.
T Consensus 160 A~~l~~~~~y~Itv~~~~~-~~~~a~~~g~l~~a~~~l~~v~~~l~kv~d~FkaeL~~aa~~a~~aYeaa 228 (412)
T 2ra1_A 160 AQALRDRLIYDITVAMKAR-EAQDAVKAGNLDKAKAALDQVNQYVSKVTDAFKAELQKAAQDAKAAYEAA 228 (412)
T ss_dssp HHHHHHHTHHHHHHHHHHH-HHHHHHHTTCHHHHHHHHHHHHHHGGGCCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHH-HHHHHhccCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhhhhhhhccc
Confidence 3444566677766665543 46667777888999999999999999887777888877777766555543
No 120
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=30.38 E-value=39 Score=32.01 Aligned_cols=47 Identities=21% Similarity=0.222 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+++.....+...++++|+++++.+.+|++|+.-|+++++ -+.+.+.|
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~l 271 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRL 271 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 334455677888999999999999999999999988764 34566777
No 121
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=30.36 E-value=1.6e+02 Score=21.95 Aligned_cols=55 Identities=20% Similarity=0.421 Sum_probs=32.9
Q ss_pred EEEEEEecCccccccCcceeEEEecCCCCCCCCCCeEEEEEEEeCCccEEEEEEecCCCceeeEEEecC
Q 011367 290 VSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITND 358 (487)
Q Consensus 290 ~~i~i~~g~~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~g~l~v~~~~~~~~~~~~i~i~~~ 358 (487)
..+.|++...........-|.|.|+++++. ...|.|.|+.++ ..|+...+++...
T Consensus 27 A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp~~ 81 (90)
T 3fcg_A 27 ARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVPYD 81 (90)
T ss_dssp EEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEEEC
T ss_pred cEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEECcc
Confidence 456666655444444455688999887663 234566666665 3567777666654
No 122
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=30.10 E-value=58 Score=32.05 Aligned_cols=48 Identities=6% Similarity=-0.033 Sum_probs=28.7
Q ss_pred CcCEEEEEcCCCC-cHHHHHHHHhhcC---------CCCCCCCCCchhHHhhhhhhhhh
Q 011367 182 QIDEIVLVGGSTR-IPKVQQLLKDYFD---------GKEPNKGVNPDEAVAYGAAVQGG 230 (487)
Q Consensus 182 ~i~~V~LvGG~s~-ip~v~~~l~~~f~---------~~~~~~~~~p~~aVa~GAa~~a~ 230 (487)
+++.|+|.||.+. .|.+.+.|++.+. ..++....-.+. .+.|||..+.
T Consensus 357 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 357 NPEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 4678999999877 3555555554431 112222323345 8899998764
No 123
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=29.85 E-value=1.5e+02 Score=29.28 Aligned_cols=30 Identities=30% Similarity=0.639 Sum_probs=24.4
Q ss_pred CCcEEEEEEeCCCeEEEEEEEEeCCeEEEEE
Q 011367 43 GEKNILVFDLGGGTFDVSILTIDNGVFEVLS 73 (487)
Q Consensus 43 ~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~ 73 (487)
....+|.+|+||.++-|.++++.++ +++..
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~ 86 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITS 86 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEE
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEE
Confidence 3457999999999999999999766 45443
No 124
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=29.29 E-value=4e+02 Score=25.77 Aligned_cols=147 Identities=14% Similarity=0.053 Sum_probs=0.0
Q ss_pred HHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcc------hhHHHHHHHHHHHHHHHHhcCC
Q 011367 30 TAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLG------GEDFDQRVMEYFIKLIKKKHGK 103 (487)
Q Consensus 30 ~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG------G~~id~~l~~~~~~~~~~~~~~ 103 (487)
.|--++-.+.+.....+++++-+|+| +|+.-+.++..--....-...-| .-++|-.+.-|+..+
T Consensus 180 va~r~a~~lgk~~~~~~lIv~HLGnG---aSv~Ai~~GksvDtsmG~tpleGl~mgtRsGdiDp~~l~~l~~~------- 249 (391)
T 3r9p_A 180 VSEQAAAFLDRPLRGLKQIVLHLGNG---CSASAIAGTRPLDTSMGLTPLEGLVMGTRSGDIDPSIVSYLCHT------- 249 (391)
T ss_dssp HHHHHHHHTTSCGGGCEEEEEEESSS---EEEEEEETTEEEEESCCSSTTSSSCCSSCCCSCCTHHHHHHHHH-------
T ss_pred HHHHHHHHhCCChHHcCEEEEEeCCC---cEeEEEECCEEEeeCCCCCcccCCCCCCCCCCCChHHHHHHHHh-------
Q ss_pred CCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccCCceeEEEecHHHHH------HHHHHHHHHHHHHHHHHHHHcC
Q 011367 104 DISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFDGIDFSEPLTRARFE------ELNNDLFRKTMGPVKKAMEDAG 177 (487)
Q Consensus 104 ~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~fe------~~~~~~~~~~~~~i~~~l~~~~ 177 (487)
...+...+.+++..---++-.+..++ -|+-++ +-.+-.++-++..|.+.+-..-
T Consensus 250 -~g~s~~ei~~~Lnk~SGLlglsG~~D-------------------~R~v~~~~~~gd~~A~lA~d~f~yri~k~Iga~a 309 (391)
T 3r9p_A 250 -AGMGVDDVESMLNHRSGVVGLSGVRD-------------------FRRLRELIESGDGAAQLAYSVFTHRLRKYIGAYL 309 (391)
T ss_dssp -SCCCHHHHHHHHHHSCHHHHHHSCSC-------------------SHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCHHHHHHHHHhccCceeecCCCC-------------------HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred CCcCCcCEEEEEcCCCC-cHHHHHHHHhhc
Q 011367 178 LEKNQIDEIVLVGGSTR-IPKVQQLLKDYF 206 (487)
Q Consensus 178 ~~~~~i~~V~LvGG~s~-ip~v~~~l~~~f 206 (487)
.....+|.|+++||-+. .+.||+.|.+.+
T Consensus 310 a~Lg~vDaIVfTGGIgens~~vR~~i~~~l 339 (391)
T 3r9p_A 310 AVLGHTDVISFTAGIGENDAAVRRDAVSGM 339 (391)
T ss_dssp HHHSSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHhCCCCEEEECcccccCCHHHHHHHHHHH
No 125
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=29.13 E-value=2.6e+02 Score=23.65 Aligned_cols=66 Identities=12% Similarity=0.209 Sum_probs=34.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHHHHHhc
Q 011367 360 GRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDD 436 (487)
Q Consensus 360 ~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~~~~~~~~~~~~~e~~~i~~~l~e~~~WL~~ 436 (487)
..||+|+..++.+..+++..+ ..+.+.++-+.-.+++..+. .+..++...+.+.+.+.+++..|..
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~------~~~Lr~ql~akr~EL~aL~~-----a~~~DeakI~aL~~Ei~~Lr~qL~~ 131 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQ------TSALRQQLISKRYEYNALLT-----ASSPDTAKINAVAKEMESLGQKLDE 131 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 458999988887766665433 22223333333334444442 2345665666665555555555444
No 126
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=27.51 E-value=1.6e+02 Score=27.30 Aligned_cols=25 Identities=48% Similarity=0.627 Sum_probs=20.4
Q ss_pred cEEEEEEeCCCeEEEEEEEEeCCeE
Q 011367 45 KNILVFDLGGGTFDVSILTIDNGVF 69 (487)
Q Consensus 45 ~~vlv~D~GggT~dvsv~~~~~~~~ 69 (487)
..++.+|+||..+.+.++......+
T Consensus 6 ~~~lgiDiggt~~~~~l~d~~g~il 30 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTTDGVVQ 30 (326)
T ss_dssp CEEEEEEECSSEEEEEEEETTCCEE
T ss_pred cEEEEEEECCCEEEEEEECCCCCEE
Confidence 4689999999999999998765544
No 127
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=26.97 E-value=71 Score=31.28 Aligned_cols=46 Identities=11% Similarity=0.032 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCC-CcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGST-RIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-~ip~v~~~l~~~f 206 (487)
.++-++.++.+.|-...... ..+|.|+++||.+ +.+.||+.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34445556666665554442 4599999999999 9999999998765
No 128
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=26.73 E-value=1.1e+02 Score=28.95 Aligned_cols=43 Identities=19% Similarity=0.168 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHH
Q 011367 160 DLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL 202 (487)
Q Consensus 160 ~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l 202 (487)
...+.+...|+++|++++++..+||.|...-|-...+.++--+
T Consensus 51 ~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 51 HHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 3445677889999999999999999999998888888876544
No 129
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=26.25 E-value=83 Score=28.34 Aligned_cols=53 Identities=19% Similarity=0.181 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhh
Q 011367 163 RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAA 226 (487)
Q Consensus 163 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 226 (487)
+.+.+.+.+.+.. ..+|.|+| |++.+|.+.+.|++.++ . ..+||-.++++=+.
T Consensus 160 ~~l~~~~~~~~~~-----~gad~IVL--GCTh~p~l~~~i~~~~g-V---pvID~~~a~~~~~~ 212 (245)
T 3qvl_A 160 EKVRERCIRALKE-----DGSGAIVL--GSGGMATLAQQLTRELR-V---PVIDGVSAAVKMVE 212 (245)
T ss_dssp HHHHHHHHHHHHH-----SCCSEEEE--CCGGGGGGHHHHHHHHT-S---CEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----cCCCEEEE--CCCChHHHHHHHHHHcC-C---eEEccHHHHHHHHH
Confidence 3344444444444 34778777 88899999999999994 3 33577777665544
No 130
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=25.89 E-value=1.9e+02 Score=28.25 Aligned_cols=152 Identities=18% Similarity=0.161 Sum_probs=0.0
Q ss_pred HHHHHHhccccCCCCcEEEEEEeCCCeEEEEEEEEeCCeEEEEEecCCCCcc------hhHHHHHHHHHHHHHHHHhcCC
Q 011367 30 TAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTNGDTHLG------GEDFDQRVMEYFIKLIKKKHGK 103 (487)
Q Consensus 30 ~Aaa~~y~~~~~~~~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG------G~~id~~l~~~~~~~~~~~~~~ 103 (487)
.|--++-.+.+.....+++|+-+|+| +|+.-+.+|..--....-...-| .-++|-.+.-|++.+..
T Consensus 204 Va~r~a~~lgk~~~~~~lIv~HLGnG---aSi~Ai~~GksvDTsMG~TpleGl~mgtRsGdiDp~~l~~l~~~~g----- 275 (415)
T 3sk3_A 204 VTQEAAKMLNKPVEELNIITCHLGNG---GSVSAIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLG----- 275 (415)
T ss_dssp HHHHHHHHTTSCGGGCCEEEEECSSS---CEEEEEETTEEEEECCCCCCSCC-------CCCCHHHHHHHHHHHT-----
T ss_pred HHHHHHHHhCCChHHCcEEEEEeCCC---ceEEEEECCEEEEeCCCcCCCCCccCCCCCCCCChHHHHHHHHhcC-----
Q ss_pred CCccCHHHHHHHHHHHHHHHHHccCCceeEEeeecccC-CceeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC
Q 011367 104 DISKDKRAIGKLRREAERAKRALSSQHQVRVEIESLFD-GIDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLEKNQ 182 (487)
Q Consensus 104 ~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~-~~~~~~~itr~~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~ 182 (487)
...+.+...|....- +-.+.. ..|......+..=.+-.+-.++-++-.|.+.+-..-....-
T Consensus 276 -------------~s~~ei~~~Lnk~SG----LlglsG~S~D~R~le~~~~gd~~A~lA~d~f~yri~k~IGa~aa~L~G 338 (415)
T 3sk3_A 276 -------------MSVDQINKMLTKESG----LLGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGSYTALMDG 338 (415)
T ss_dssp -------------CCHHHHHHHC----------CCSTTTTCGGGCSSCCCCCHHHHHHHHHHHHHHHHHHHHHGGGGSTT
T ss_pred -------------CCHHHHHHHHhcCcC----cccccCCcchHHHHHHHHcCCHhHHHHHHHHHHHHHHHHHHHHHHhCC
Q ss_pred -cCEEEEEcCCC-CcHHHHHHHHhhc
Q 011367 183 -IDEIVLVGGST-RIPKVQQLLKDYF 206 (487)
Q Consensus 183 -i~~V~LvGG~s-~ip~v~~~l~~~f 206 (487)
+|.|+++||-+ ..+.||+.+.+.+
T Consensus 339 ~vDaIVFTgGIGEns~~vR~~v~~~l 364 (415)
T 3sk3_A 339 RLDAVVFTGGIGENAAMVRELSLGKL 364 (415)
T ss_dssp CCCEEEEEHHHHTTCHHHHHHHHHTC
T ss_pred CCCEEEECCccccCCHHHHHHHHhhc
No 131
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=25.69 E-value=56 Score=30.70 Aligned_cols=45 Identities=29% Similarity=0.296 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 159 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 159 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
......+...++++|+++++.+.+|++|++-++++++ -+.+.+.|
T Consensus 228 ~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~l 272 (335)
T 1u6e_A 228 RWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNL 272 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHc
Confidence 3445677788999999999999999999999988765 33455666
No 132
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=25.16 E-value=93 Score=27.70 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHH
Q 011367 163 RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQ 200 (487)
Q Consensus 163 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~ 200 (487)
+.+...|+++|+++++...+||.|.+.=|-+....+|-
T Consensus 36 ~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRi 73 (231)
T 2gel_A 36 QRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRI 73 (231)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHH
Confidence 34678889999999999999999999988777777763
No 133
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=24.75 E-value=1.9e+02 Score=26.58 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=19.5
Q ss_pred cEEEEEEeCCCeEEEEEEEEeCCe
Q 011367 45 KNILVFDLGGGTFDVSILTIDNGV 68 (487)
Q Consensus 45 ~~vlv~D~GggT~dvsv~~~~~~~ 68 (487)
..++.+|+||.++.+.++......
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~G~i 34 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASDGTP 34 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETTCCE
T ss_pred CEEEEEEcCccceEEEEEcCCCCE
Confidence 378999999999999998755443
No 134
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=24.34 E-value=4.5e+02 Score=24.73 Aligned_cols=68 Identities=19% Similarity=0.263 Sum_probs=44.3
Q ss_pred CcEEEEEEeCCCeEEEEEEEEe-CCeEEEEEecC-CCCcchhHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHH
Q 011367 44 EKNILVFDLGGGTFDVSILTID-NGVFEVLSTNG-DTHLGGEDFDQRVMEYFIKLIKKKHGKDISKDKRAIGKLRREAER 121 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~-~~~~~v~~~~~-~~~lGG~~id~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 121 (487)
...+.++|+|.-++-+.|+++. ++.++++.... -..+|- .++.. + ..++.++.+.......
T Consensus 15 ~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~-g~~~~-------------g---~ls~eai~r~~~aL~~ 77 (343)
T 3cer_A 15 SVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQ-DVDKT-------------H---RFADEALERAYVAARE 77 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTT-THHHH-------------S---SCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCC-Ccccc-------------C---CcCHHHHHHHHHHHHH
Confidence 4678999999999999999998 45576664432 233443 33211 1 1246677777777777
Q ss_pred HHHHccC
Q 011367 122 AKRALSS 128 (487)
Q Consensus 122 ~K~~Ls~ 128 (487)
.+..+..
T Consensus 78 f~~~~~~ 84 (343)
T 3cer_A 78 FAGVIAE 84 (343)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 7766643
No 135
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=24.06 E-value=1.2e+02 Score=28.66 Aligned_cols=67 Identities=24% Similarity=0.242 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHH------HhhcCCCCCCCCCCchhHHhhhhhh
Q 011367 159 NDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL------KDYFDGKEPNKGVNPDEAVAYGAAV 227 (487)
Q Consensus 159 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l------~~~f~~~~~~~~~~p~~aVa~GAa~ 227 (487)
....+.+...|+++|++++++..+|+.|....|-+..+.+|--+ ...+ +. +...++-.+|-+.+|.+
T Consensus 45 ~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrvg~~~ak~la~~~-~~-pl~~v~h~~aHa~~a~~ 117 (330)
T 2ivn_A 45 EHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRVVATAARALAVKY-RK-PIVGVNHCIAHVEITKM 117 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHHHHHHHHHHHHHT-TC-CEEEEEHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHHHHHHHHHHHHHc-CC-CEEeeCcHHHHHHHHhh
Confidence 34455667889999999999999999999887777776665433 2222 12 22334445666666544
No 136
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=22.78 E-value=1.3e+02 Score=26.70 Aligned_cols=47 Identities=19% Similarity=0.241 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHh
Q 011367 153 RFEELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKD 204 (487)
Q Consensus 153 ~fe~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~ 204 (487)
+-+++.+..-+.+.+.+.+++.+ ...-.+.|.||+|-.+..+.+++.
T Consensus 9 ~~~~l~~~~A~~i~~~i~~~i~~-----~~~~~l~LsgGstp~~~y~~L~~~ 55 (226)
T 3lwd_A 9 GRQRLAERLADTVAQALEADLAK-----RERALLVVSGGSTPKPFFTSLAAK 55 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-----SSCEEEEECCSSTTHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh-----CCCEEEEEcCCCCHHHHHHHHHhc
Confidence 44556666666666677777654 223478899999999999888764
No 137
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=22.66 E-value=2.4e+02 Score=26.06 Aligned_cols=26 Identities=15% Similarity=0.331 Sum_probs=20.8
Q ss_pred CcEEEEEEeCCCeEEEEEEEEeCCeE
Q 011367 44 EKNILVFDLGGGTFDVSILTIDNGVF 69 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~~~~~ 69 (487)
...++.+|+||..+.+.++......+
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~il 48 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRRLQ 48 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEE
T ss_pred CceEEEEEECCCEEEEEEEeCCCCEE
Confidence 35689999999999999987665544
No 138
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=22.64 E-value=3.5e+02 Score=25.12 Aligned_cols=31 Identities=16% Similarity=0.362 Sum_probs=25.9
Q ss_pred CcEEEEEEeCCCeEEEEEEEEeCCeEEEEEe
Q 011367 44 EKNILVFDLGGGTFDVSILTIDNGVFEVLST 74 (487)
Q Consensus 44 ~~~vlv~D~GggT~dvsv~~~~~~~~~v~~~ 74 (487)
...+.++|+|..++-+.|+++.++.+.++..
T Consensus 11 ~m~~a~IDiGSns~rl~I~~~~~~~~~~i~~ 41 (315)
T 1t6c_A 11 IMRVASIDIGSYSVRLTIAQIKDGKLSIILE 41 (315)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEECcCcEEEEEEEEcCCcEEEEee
Confidence 3578999999999999999998876766544
No 139
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=22.51 E-value=84 Score=27.72 Aligned_cols=64 Identities=20% Similarity=0.266 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHh--hc--CCCCCCCCCCchhHHhhhhh
Q 011367 163 RKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKD--YF--DGKEPNKGVNPDEAVAYGAA 226 (487)
Q Consensus 163 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~--~f--~~~~~~~~~~p~~aVa~GAa 226 (487)
+.+...|+++|++++++..+||.|.+.=|-+....+|=-+.- -+ .-..+...++..++.|.++.
T Consensus 37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~~ 104 (213)
T 3r6m_A 37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASY 104 (213)
T ss_dssp HHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhhh
Confidence 456678899999999999999999999888888888765431 11 11223445566666666543
No 140
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=22.50 E-value=55 Score=31.77 Aligned_cols=46 Identities=20% Similarity=0.229 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 158 NNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 158 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
.....+.+...++++|+++++++.+|++|++-+++.++ .+.+.+.+
T Consensus 282 ~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~l 327 (393)
T 1ted_A 282 PGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSL 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHc
Confidence 34456677788999999999999999999998888664 44566666
No 141
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=22.44 E-value=96 Score=27.42 Aligned_cols=41 Identities=15% Similarity=0.119 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHH
Q 011367 162 FRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLL 202 (487)
Q Consensus 162 ~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l 202 (487)
.+.+...|+++|+++++...+|+.|.+.-|-+....+|=-+
T Consensus 46 se~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG~ 86 (218)
T 2a6a_A 46 AEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVGI 86 (218)
T ss_dssp GGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHHH
Confidence 34567888999999999999999999998888777776443
No 142
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=22.01 E-value=90 Score=29.34 Aligned_cols=46 Identities=30% Similarity=0.320 Sum_probs=30.5
Q ss_pred HcCCceeeeechhHHHHHHhccc---------c--CCCCcEEEEEEeCCCeEEEEEEE
Q 011367 17 IAGLNVARIINEPTAAAIAYGLD---------K--KGGEKNILVFDLGGGTFDVSILT 63 (487)
Q Consensus 17 ~AGl~~~~li~Ep~Aaa~~y~~~---------~--~~~~~~vlv~D~GggT~dvsv~~ 63 (487)
..|++.+.+.|+-.|+|++-... . .....+++++-+|.|- =..++.
T Consensus 100 ~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 100 NLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp HHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEE
T ss_pred HhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEe
Confidence 35887679999999999975332 1 1134568888888873 344443
No 143
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=21.94 E-value=1.4e+02 Score=26.47 Aligned_cols=46 Identities=26% Similarity=0.359 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhh
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDY 205 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~ 205 (487)
+++.+.+-+.+.+.+.+++.+.+ .-.+.|.||+|-.+..+.+++..
T Consensus 15 ~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~~ 60 (233)
T 3nwp_A 15 SALEQQLASKIASQLQEAVDARG-----KASLVVSGGSTPLKLFQLLSMKS 60 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEcCCCCHHHHHHHHHhcC
Confidence 44455555666777777776533 34688999999999998888643
No 144
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=21.46 E-value=77 Score=29.05 Aligned_cols=45 Identities=20% Similarity=0.438 Sum_probs=34.2
Q ss_pred cCCcCEEEEEcCCCCcHHHHHHHHhhcCCCCCCCCCCchhHHhhhhhhh
Q 011367 180 KNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQ 228 (487)
Q Consensus 180 ~~~i~~V~LvGG~s~ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~ 228 (487)
...+|.|+| |+|.+|++.+.|++.++ ..+ .-+||-+++|+-+.-+
T Consensus 176 ~~g~D~iVL--GCTh~pll~~~i~~~~~-~~v-~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 176 STKIDTVIL--GCTHYPLLKPIIENFMG-DGV-AVINSGEETASEVSAL 220 (269)
T ss_dssp GSCCCEEEE--CSTTGGGGHHHHHHHHC-TTS-EEECTHHHHHHHHHHH
T ss_pred hCCCCEEEE--CCCCHHHHHHHHHHHcC-CCC-eEECcHHHHHHHHHHH
Confidence 346888877 99999999999999984 222 3358888888876643
No 145
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=21.34 E-value=2.1e+02 Score=31.35 Aligned_cols=25 Identities=36% Similarity=0.713 Sum_probs=21.7
Q ss_pred CCcEEEEEEeCCCeEEEEEEEEeCC
Q 011367 43 GEKNILVFDLGGGTFDVSILTIDNG 67 (487)
Q Consensus 43 ~~~~vlv~D~GggT~dvsv~~~~~~ 67 (487)
....+|.+|+||.++-+.++.+.++
T Consensus 524 E~G~~lalDlGGTn~Rv~~V~l~~g 548 (917)
T 1cza_N 524 ENGDFLALDLGGTNFRVLLVKIRSG 548 (917)
T ss_dssp CCEEEEEEEESSSSEEEEEEEEECS
T ss_pred cceEEEEEEECCCcEEEEEEEeCCC
Confidence 4568999999999999999999744
No 146
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=21.23 E-value=82 Score=29.66 Aligned_cols=47 Identities=19% Similarity=0.106 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHhhc
Q 011367 157 LNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKDYF 206 (487)
Q Consensus 157 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~~f 206 (487)
+++..+..+...++++|+++++++.+|+++++-.++.+ +.+.+.+.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~l 274 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKL 274 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 44556677788899999999999999999999888765 346666666
No 147
>2kp6_A Uncharacterized protein; unknown function, structural genomics, PSI-2, protein struct initiative; NMR {Chromobacterium violaceum}
Probab=20.50 E-value=62 Score=23.76 Aligned_cols=15 Identities=7% Similarity=-0.195 Sum_probs=13.5
Q ss_pred CCCHHHHHHHHHHHH
Q 011367 2 LLSLFLRQATKDAGI 16 (487)
Q Consensus 2 ~f~~~qR~a~~~Aa~ 16 (487)
||++.||..++++..
T Consensus 47 FWt~sQ~~FL~E~~~ 61 (82)
T 2kp6_A 47 FWTPAQAAFLRQALE 61 (82)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 799999999999865
No 148
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=20.42 E-value=1.5e+02 Score=26.26 Aligned_cols=45 Identities=18% Similarity=0.291 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcCEEEEEcCCCCcHHHHHHHHh
Q 011367 155 EELNNDLFRKTMGPVKKAMEDAGLEKNQIDEIVLVGGSTRIPKVQQLLKD 204 (487)
Q Consensus 155 e~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s~ip~v~~~l~~ 204 (487)
+++.+.+-+.+.+.+.+++.+.+ .-.+.|.||+|-.+..+.+++.
T Consensus 12 ~~l~~~~A~~i~~~i~~~i~~~~-----~~~l~lsgGstp~~~y~~L~~~ 56 (232)
T 3lhi_A 12 AEAAQSLADAVADALQGALDEKG-----GAVLAVSGGRSPIAFFNALSQK 56 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-----CEEEEECCSSTTHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-----CEEEEEeCCCCHHHHHHHHHhc
Confidence 44555556666777777776533 3478899999999998888754
No 149
>1nfn_A Apolipoprotein E3; lipid transport, heparin-binding, plasma protein, HDL, VLDL; 1.80A {Homo sapiens} SCOP: a.24.1.1 PDB: 1h7i_A 1ea8_A 1b68_A 1nfo_A 2kc3_A 1ya9_A
Probab=20.41 E-value=3.8e+02 Score=22.92 Aligned_cols=23 Identities=13% Similarity=0.172 Sum_probs=14.1
Q ss_pred HhHHHHhhhHHHHHHHHHHHhhh
Q 011367 385 KEKIDARNSLETYVYNMKNQIND 407 (487)
Q Consensus 385 ~~~~~a~N~LE~~iy~~r~~l~~ 407 (487)
....+.|..|+-|..+++..+..
T Consensus 106 kdlEelr~kL~P~~eEL~~~l~~ 128 (191)
T 1nfn_A 106 ADMEDVCGRLVQYRGEVQAMLGQ 128 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHH
Confidence 34455666677777666666643
No 150
>3tso_C RAB11 family-interacting protein 2; RAS GTPase fold (RAB25), vesicle trafficking, endosome, PROT transport; HET: GNP; 1.80A {Homo sapiens} PDB: 2k6s_A
Probab=20.36 E-value=2.4e+02 Score=20.14 Aligned_cols=41 Identities=22% Similarity=0.272 Sum_probs=27.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhchhhHhHHHHhhhHHHHHHHHHHHhh
Q 011367 360 GRLSQEEIDRMVREAEEFAEEDKKVKEKIDARNSLETYVYNMKNQIN 406 (487)
Q Consensus 360 ~~ls~e~i~~~~~~~~~~~~~D~~~~~~~~a~N~LE~~iy~~r~~l~ 406 (487)
..+|.+|+-.+..+.+. ....+.....+||.||..+--++.
T Consensus 12 ~~ltreELi~l~lk~~~------~l~~k~~~v~eLEdYID~LLvRVM 52 (75)
T 3tso_C 12 RSLTYEEVLQELVKHKE------LLRRKDTHIRELEDYIDNLLVRVM 52 (75)
T ss_dssp CCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56888888766544332 233445567789999999876654
Done!