Query 011369
Match_columns 487
No_of_seqs 408 out of 2053
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 00:35:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011369.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011369hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.4E-40 3.1E-45 297.1 10.0 379 62-486 26-409 (448)
2 KOG1330 Sugar transporter/spin 100.0 7.2E-39 1.6E-43 288.9 17.3 374 58-486 26-412 (493)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.8E-38 3.9E-43 304.8 18.1 381 63-486 6-395 (412)
4 COG2814 AraJ Arabinose efflux 100.0 2.2E-38 4.7E-43 287.8 16.6 346 66-486 14-361 (394)
5 PRK09556 uhpT sugar phosphate 100.0 2.9E-38 6.3E-43 308.9 7.6 373 63-485 27-411 (467)
6 TIGR01299 synapt_SV2 synaptic 100.0 1.1E-37 2.3E-42 311.3 11.7 400 62-485 164-709 (742)
7 PRK11663 regulatory protein Uh 100.0 4.1E-37 9E-42 297.9 12.3 377 64-486 22-399 (434)
8 PRK14995 methyl viologen resis 100.0 4.6E-37 1E-41 302.1 12.0 397 63-485 4-412 (495)
9 TIGR00903 2A0129 major facilit 100.0 1.5E-37 3.3E-42 292.0 8.2 330 102-484 11-340 (368)
10 PRK03545 putative arabinose tr 100.0 1.6E-36 3.4E-41 290.5 13.8 324 105-487 32-356 (390)
11 PRK11551 putative 3-hydroxyphe 100.0 1.3E-35 2.8E-40 286.2 14.1 358 62-486 12-370 (406)
12 TIGR00893 2A0114 d-galactonate 100.0 1.7E-35 3.7E-40 285.0 14.4 353 105-486 17-373 (399)
13 PRK10213 nepI ribonucleoside t 100.0 7.2E-35 1.6E-39 278.2 15.5 322 105-486 43-366 (394)
14 PRK10406 alpha-ketoglutarate t 100.0 3.1E-35 6.8E-40 284.8 12.0 346 66-483 23-396 (432)
15 TIGR00891 2A0112 putative sial 100.0 6.5E-35 1.4E-39 281.7 14.1 376 62-486 9-390 (405)
16 TIGR00881 2A0104 phosphoglycer 100.0 2.3E-35 5E-40 282.2 10.4 366 73-486 3-372 (379)
17 TIGR00894 2A0114euk Na(+)-depe 100.0 2.5E-34 5.3E-39 281.8 17.6 392 62-486 16-422 (465)
18 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-34 2.4E-39 277.3 13.5 329 105-486 26-357 (377)
19 TIGR00900 2A0121 H+ Antiporter 100.0 1.5E-34 3.2E-39 275.2 12.2 334 106-487 23-364 (365)
20 PRK10642 proline/glycine betai 100.0 7.5E-35 1.6E-39 286.2 10.0 361 64-485 15-403 (490)
21 TIGR00711 efflux_EmrB drug res 100.0 5.8E-35 1.3E-39 288.6 8.3 395 65-485 2-409 (485)
22 PRK12307 putative sialic acid 100.0 2.5E-34 5.3E-39 279.2 12.0 361 64-486 17-383 (426)
23 PRK09952 shikimate transporter 100.0 2.8E-34 6.1E-39 278.1 12.3 357 62-485 19-405 (438)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 2.7E-34 5.8E-39 279.8 11.7 375 64-486 28-410 (452)
25 PRK09705 cynX putative cyanate 100.0 4.2E-34 9.1E-39 273.2 12.6 322 103-486 30-355 (393)
26 PRK15075 citrate-proton sympor 100.0 3.1E-34 6.6E-39 278.1 11.5 354 63-486 13-394 (434)
27 PF07690 MFS_1: Major Facilita 100.0 1.3E-34 2.7E-39 274.2 8.5 327 106-477 20-352 (352)
28 TIGR00892 2A0113 monocarboxyla 100.0 3.9E-33 8.5E-38 271.1 17.5 376 64-486 18-395 (455)
29 TIGR00895 2A0115 benzoate tran 100.0 3.6E-34 7.7E-39 275.9 10.2 381 64-483 16-397 (398)
30 TIGR00710 efflux_Bcr_CflA drug 100.0 3E-33 6.4E-38 268.2 15.4 328 103-484 26-359 (385)
31 TIGR00805 oat sodium-independe 100.0 2.9E-32 6.4E-37 272.1 22.8 359 105-487 56-582 (633)
32 PLN00028 nitrate transmembrane 100.0 3.3E-33 7.2E-38 272.9 15.4 332 105-479 59-402 (476)
33 PRK10091 MFS transport protein 100.0 2.6E-33 5.6E-38 267.2 13.7 322 105-486 26-350 (382)
34 PRK03699 putative transporter; 100.0 1.6E-33 3.4E-38 269.9 11.8 347 64-486 6-355 (394)
35 PRK15402 multidrug efflux syst 100.0 4.1E-33 9E-38 268.5 14.5 351 66-486 14-370 (406)
36 PRK15034 nitrate/nitrite trans 100.0 1.2E-32 2.6E-37 259.8 16.8 345 63-486 32-428 (462)
37 TIGR00887 2A0109 phosphate:H+ 100.0 1.2E-32 2.6E-37 271.7 16.8 385 62-485 13-453 (502)
38 TIGR00879 SP MFS transporter, 100.0 6.1E-33 1.3E-37 274.2 14.6 366 105-486 51-445 (481)
39 KOG2533 Permease of the major 100.0 9.6E-33 2.1E-37 262.8 14.0 361 56-460 36-404 (495)
40 TIGR00712 glpT glycerol-3-phos 100.0 1.2E-32 2.5E-37 267.4 13.7 375 64-486 26-408 (438)
41 COG2223 NarK Nitrate/nitrite t 100.0 1.8E-32 4E-37 245.9 12.3 349 64-486 13-375 (417)
42 PRK15403 multidrug efflux syst 100.0 4.5E-32 9.9E-37 260.4 15.9 329 101-483 35-370 (413)
43 TIGR00898 2A0119 cation transp 100.0 1.3E-32 2.9E-37 272.8 12.4 350 103-481 110-467 (505)
44 PRK11102 bicyclomycin/multidru 100.0 3.2E-32 6.9E-37 260.1 13.6 331 100-481 9-344 (377)
45 PRK10133 L-fucose transporter; 100.0 4.1E-32 9E-37 261.9 13.7 348 67-486 28-407 (438)
46 PRK10504 putative transporter; 100.0 2E-32 4.4E-37 269.0 10.1 396 66-485 11-414 (471)
47 PRK10077 xylE D-xylose transpo 100.0 1.1E-31 2.3E-36 264.8 14.1 374 63-480 10-420 (479)
48 TIGR00886 2A0108 nitrite extru 100.0 3.5E-31 7.6E-36 252.0 16.8 324 105-472 24-365 (366)
49 PRK05122 major facilitator sup 100.0 8.7E-32 1.9E-36 258.9 12.6 342 64-486 14-364 (399)
50 PRK11646 multidrug resistance 100.0 2.7E-31 5.8E-36 254.2 15.9 323 106-486 35-359 (400)
51 PRK03893 putative sialic acid 100.0 8.8E-32 1.9E-36 266.5 11.6 386 62-486 17-428 (496)
52 TIGR00885 fucP L-fucose:H+ sym 100.0 1.8E-31 4E-36 255.1 12.8 345 67-486 5-381 (410)
53 TIGR00899 2A0120 sugar efflux 100.0 2.6E-31 5.7E-36 253.7 13.9 323 107-486 23-349 (375)
54 TIGR00897 2A0118 polyol permea 100.0 6.8E-31 1.5E-35 252.2 15.9 328 106-486 37-376 (402)
55 PRK10489 enterobactin exporter 100.0 5.6E-31 1.2E-35 254.5 14.2 328 106-486 41-374 (417)
56 KOG0253 Synaptic vesicle trans 100.0 1.5E-30 3.2E-35 227.0 15.0 389 62-480 75-490 (528)
57 PRK11652 emrD multidrug resist 100.0 5.7E-31 1.2E-35 252.7 13.4 328 103-485 29-359 (394)
58 KOG2532 Permease of the major 100.0 4.7E-31 1E-35 251.0 12.5 343 109-484 65-417 (466)
59 PRK12382 putative transporter; 100.0 4.7E-31 1E-35 253.1 12.2 318 105-486 38-364 (392)
60 TIGR00896 CynX cyanate transpo 100.0 4.6E-31 9.9E-36 249.6 11.8 325 103-487 21-349 (355)
61 PRK11043 putative transporter; 100.0 1.3E-30 2.8E-35 250.8 13.7 327 103-485 27-356 (401)
62 PRK03633 putative MFS family t 100.0 6.2E-31 1.3E-35 250.9 11.3 339 67-486 8-347 (381)
63 PRK10473 multidrug efflux syst 100.0 2.4E-30 5.2E-35 248.2 15.4 267 104-423 25-292 (392)
64 PRK09874 drug efflux system pr 100.0 8.4E-31 1.8E-35 253.1 12.2 327 105-486 37-373 (408)
65 PRK11195 lysophospholipid tran 100.0 2.5E-30 5.5E-35 246.8 13.4 325 106-483 27-353 (393)
66 PRK10054 putative transporter; 100.0 4.9E-30 1.1E-34 245.0 12.9 325 106-487 32-360 (395)
67 cd06174 MFS The Major Facilita 100.0 6.2E-30 1.3E-34 242.0 13.2 303 105-485 22-326 (352)
68 TIGR00883 2A0106 metabolite-pr 100.0 7.7E-31 1.7E-35 252.3 6.4 329 106-486 17-375 (394)
69 TIGR00902 2A0127 phenyl propri 100.0 3.1E-30 6.7E-35 245.9 10.0 326 104-487 26-356 (382)
70 PRK15011 sugar efflux transpor 100.0 9.5E-29 2.1E-33 236.6 14.2 322 106-486 40-366 (393)
71 KOG2504 Monocarboxylate transp 100.0 1.2E-28 2.6E-33 237.5 14.7 374 106-487 70-451 (509)
72 KOG0254 Predicted transporter 100.0 1E-27 2.2E-32 236.6 21.0 340 117-471 89-443 (513)
73 KOG3764 Vesicular amine transp 100.0 2.8E-28 6.1E-33 215.6 14.8 324 109-486 98-429 (464)
74 TIGR00901 2A0125 AmpG-related 100.0 1.7E-28 3.8E-33 232.2 14.1 311 103-466 9-352 (356)
75 PRK11128 putative 3-phenylprop 100.0 3E-29 6.5E-34 239.3 7.6 326 104-487 26-356 (382)
76 PRK06814 acylglycerophosphoeth 100.0 1.3E-28 2.9E-33 266.7 9.7 329 107-484 41-394 (1140)
77 COG0738 FucP Fucose permease [ 99.9 4.6E-28 1E-32 216.0 10.0 326 105-487 36-385 (422)
78 PRK08633 2-acyl-glycerophospho 99.9 5.3E-28 1.1E-32 263.1 12.7 330 106-481 34-379 (1146)
79 PRK11010 ampG muropeptide tran 99.9 1E-27 2.2E-32 234.6 12.7 328 105-486 35-378 (491)
80 KOG2615 Permease of the major 99.9 7.4E-28 1.6E-32 211.7 9.8 342 114-486 65-414 (451)
81 KOG0569 Permease of the major 99.9 5.3E-27 1.1E-31 220.4 15.6 334 119-466 62-411 (485)
82 PF06609 TRI12: Fungal trichot 99.9 2.8E-26 6.1E-31 221.0 16.7 369 105-481 67-462 (599)
83 TIGR00806 rfc RFC reduced fola 99.9 1.9E-26 4.1E-31 213.2 11.9 345 106-470 50-400 (511)
84 PRK09528 lacY galactoside perm 99.9 2.6E-27 5.7E-32 229.0 6.5 332 106-486 35-378 (420)
85 TIGR00882 2A0105 oligosacchari 99.9 4.2E-27 9.1E-32 225.9 7.9 331 107-486 28-370 (396)
86 PF00083 Sugar_tr: Sugar (and 99.9 3.6E-30 7.8E-35 251.8 -13.7 343 117-485 46-410 (451)
87 COG2807 CynX Cyanate permease 99.9 5.7E-26 1.2E-30 199.5 11.7 324 103-487 33-360 (395)
88 PF05977 MFS_3: Transmembrane 99.9 3.7E-26 7.9E-31 221.5 10.7 328 108-486 36-369 (524)
89 TIGR00792 gph sugar (Glycoside 99.9 6.2E-26 1.3E-30 221.2 12.0 330 106-486 24-380 (437)
90 PRK11902 ampG muropeptide tran 99.9 8.1E-26 1.8E-30 217.2 12.0 324 105-486 22-365 (402)
91 KOG0255 Synaptic vesicle trans 99.9 1E-25 2.2E-30 223.9 11.6 345 109-480 110-462 (521)
92 PRK10207 dipeptide/tripeptide 99.9 1.7E-25 3.8E-30 217.7 12.7 367 106-480 39-435 (489)
93 TIGR00889 2A0110 nucleoside tr 99.9 5.8E-26 1.2E-30 218.2 9.2 323 106-486 27-371 (418)
94 PTZ00207 hypothetical protein; 99.9 9.4E-25 2E-29 212.1 15.7 374 106-486 51-514 (591)
95 TIGR00924 yjdL_sub1_fam amino 99.9 8.1E-25 1.8E-29 213.1 12.1 371 108-482 37-439 (475)
96 KOG3626 Organic anion transpor 99.9 6.3E-23 1.4E-27 198.9 23.3 358 105-487 120-650 (735)
97 KOG0252 Inorganic phosphate tr 99.9 2.1E-25 4.6E-30 201.1 5.2 384 64-485 40-467 (538)
98 PF03137 OATP: Organic Anion T 99.9 1.1E-25 2.3E-30 219.1 -0.2 365 105-487 26-515 (539)
99 TIGR02718 sider_RhtX_FptX side 99.9 5.2E-24 1.1E-28 204.0 11.4 327 104-486 23-366 (390)
100 PRK09584 tppB putative tripept 99.9 5.2E-22 1.1E-26 194.6 15.8 145 106-250 46-194 (500)
101 PRK09669 putative symporter Ya 99.8 3.2E-21 6.9E-26 187.7 10.6 327 106-486 34-388 (444)
102 KOG4686 Predicted sugar transp 99.8 1.7E-22 3.6E-27 170.6 1.2 354 66-486 45-414 (459)
103 TIGR00788 fbt folate/biopterin 99.8 3.4E-21 7.3E-26 187.3 8.5 366 65-486 26-413 (468)
104 PF13347 MFS_2: MFS/sugar tran 99.8 8.9E-21 1.9E-25 183.7 10.8 328 106-485 26-383 (428)
105 TIGR01272 gluP glucose/galacto 99.8 1.2E-20 2.7E-25 173.2 9.0 266 165-486 5-290 (310)
106 PF03825 Nuc_H_symport: Nucleo 99.8 1.1E-20 2.4E-25 178.3 8.9 328 106-486 26-364 (400)
107 PF11700 ATG22: Vacuole efflux 99.8 5.7E-20 1.2E-24 176.7 12.9 328 117-487 70-443 (477)
108 TIGR01301 GPH_sucrose GPH fami 99.8 6.1E-20 1.3E-24 175.2 11.7 334 106-477 28-435 (477)
109 PRK10429 melibiose:sodium symp 99.8 6.1E-20 1.3E-24 179.8 11.9 332 106-486 31-393 (473)
110 PRK15462 dipeptide/tripeptide 99.8 4.7E-19 1E-23 169.8 13.9 149 107-256 35-187 (493)
111 KOG2563 Permease of the major 99.8 2E-18 4.3E-23 156.6 14.6 348 60-472 40-408 (480)
112 PRK09848 glucuronide transport 99.8 7.9E-19 1.7E-23 171.3 11.8 325 106-485 33-387 (448)
113 COG2270 Permeases of the major 99.7 8.7E-19 1.9E-23 158.2 4.6 325 115-486 56-403 (438)
114 PRK11462 putative transporter; 99.7 1.7E-17 3.7E-22 161.4 11.8 321 107-485 35-386 (460)
115 PF01306 LacY_symp: LacY proto 99.7 2.8E-18 6.1E-23 158.7 2.8 330 108-486 34-375 (412)
116 TIGR00880 2_A_01_02 Multidrug 99.7 1.4E-16 3.1E-21 129.0 10.6 139 121-259 2-140 (141)
117 PF03209 PUCC: PUCC protein; 99.7 1.7E-16 3.6E-21 144.1 11.7 327 108-485 6-362 (403)
118 COG2211 MelB Na+/melibiose sym 99.7 1E-15 2.3E-20 143.1 14.5 328 108-485 39-395 (467)
119 COG3104 PTR2 Dipeptide/tripept 99.6 1.9E-15 4.1E-20 140.0 13.2 372 108-481 52-451 (498)
120 TIGR00889 2A0110 nucleoside tr 99.6 7.9E-15 1.7E-19 141.2 12.9 145 116-260 250-405 (418)
121 KOG2816 Predicted transporter 99.6 5.3E-14 1.2E-18 134.0 16.0 314 127-484 72-390 (463)
122 PF05631 DUF791: Protein of un 99.6 2E-13 4.4E-18 122.3 18.5 259 63-390 36-303 (354)
123 PRK15011 sugar efflux transpor 99.6 6.6E-14 1.4E-18 134.2 14.5 149 107-256 242-390 (393)
124 PRK09528 lacY galactoside perm 99.5 1.6E-14 3.4E-19 140.0 10.0 147 112-258 257-404 (420)
125 PF01770 Folate_carrier: Reduc 99.5 1.5E-13 3.3E-18 126.6 15.2 348 106-467 28-384 (412)
126 TIGR00890 2A0111 Oxalate/Forma 99.5 2.5E-14 5.4E-19 136.6 10.1 144 106-249 229-374 (377)
127 PRK10642 proline/glycine betai 99.5 9.9E-14 2.2E-18 136.8 13.8 156 108-264 277-436 (490)
128 KOG2325 Predicted transporter/ 99.5 4.5E-13 9.7E-18 125.8 16.3 184 63-263 32-235 (488)
129 PRK05122 major facilitator sup 99.5 1.9E-13 4.1E-18 131.6 13.7 147 110-258 244-390 (399)
130 TIGR01299 synapt_SV2 synaptic 99.5 1.2E-13 2.6E-18 139.3 11.6 139 120-260 598-736 (742)
131 PRK10489 enterobactin exporter 99.5 4.2E-13 9.2E-18 129.9 14.5 154 106-259 247-401 (417)
132 PRK12382 putative transporter; 99.5 4.9E-13 1.1E-17 128.4 14.8 145 110-256 244-388 (392)
133 TIGR00899 2A0120 sugar efflux 99.5 4E-13 8.6E-18 128.3 13.7 147 108-255 226-372 (375)
134 PRK09874 drug efflux system pr 99.5 1.3E-13 2.9E-18 133.2 10.1 140 119-258 260-399 (408)
135 TIGR00892 2A0113 monocarboxyla 99.5 6.8E-14 1.5E-18 136.4 8.0 146 106-251 265-415 (455)
136 TIGR00902 2A0127 phenyl propri 99.5 3E-13 6.5E-18 129.2 11.9 145 106-252 229-374 (382)
137 cd06174 MFS The Major Facilita 99.5 2.4E-13 5.3E-18 128.4 11.1 149 106-254 199-349 (352)
138 PRK11551 putative 3-hydroxyphe 99.5 3.2E-13 7E-18 130.3 11.3 151 106-256 244-395 (406)
139 TIGR00893 2A0114 d-galactonate 99.4 8.7E-13 1.9E-17 126.9 13.2 148 107-255 241-397 (399)
140 PRK03893 putative sialic acid 99.4 5.7E-13 1.2E-17 132.2 12.0 143 106-248 299-444 (496)
141 PRK03699 putative transporter; 99.4 1.7E-12 3.8E-17 124.5 13.6 150 106-256 229-379 (394)
142 PRK03545 putative arabinose tr 99.4 2.6E-12 5.7E-17 123.2 14.1 150 106-257 230-380 (390)
143 PRK09705 cynX putative cyanate 99.4 3E-12 6.4E-17 122.7 14.1 154 106-261 229-385 (393)
144 PRK09556 uhpT sugar phosphate 99.4 1.9E-12 4.2E-17 127.0 12.3 150 107-256 284-448 (467)
145 TIGR00879 SP MFS transporter, 99.4 1.4E-12 3E-17 128.9 11.3 154 106-259 308-472 (481)
146 PF05977 MFS_3: Transmembrane 99.4 9E-12 1.9E-16 121.6 16.4 150 106-255 242-392 (524)
147 PRK03633 putative MFS family t 99.4 3.8E-12 8.3E-17 121.6 12.7 145 106-253 224-368 (381)
148 TIGR00883 2A0106 metabolite-pr 99.4 1E-12 2.2E-17 126.4 7.1 139 108-246 246-390 (394)
149 TIGR00891 2A0112 putative sial 99.4 1.5E-12 3.2E-17 125.8 7.9 136 107-242 264-401 (405)
150 TIGR00897 2A0118 polyol permea 99.3 1.3E-11 2.9E-16 118.7 14.1 149 106-256 246-400 (402)
151 PF03092 BT1: BT1 family; Int 99.3 5.8E-13 1.3E-17 128.0 3.6 339 106-483 14-377 (433)
152 PRK11128 putative 3-phenylprop 99.3 1.1E-11 2.4E-16 118.5 12.1 143 107-251 230-373 (382)
153 PRK11663 regulatory protein Uh 99.3 2.1E-11 4.5E-16 118.5 12.2 149 108-257 270-424 (434)
154 TIGR00882 2A0105 oligosacchari 99.3 1.7E-11 3.7E-16 117.8 10.6 144 113-256 250-394 (396)
155 PRK10077 xylE D-xylose transpo 99.3 1.8E-11 3.9E-16 121.0 10.6 155 106-260 295-460 (479)
156 PRK11010 ampG muropeptide tran 99.3 5.8E-11 1.3E-15 116.8 13.8 151 106-256 247-402 (491)
157 PRK09952 shikimate transporter 99.3 6.9E-11 1.5E-15 114.9 13.7 150 107-256 276-432 (438)
158 COG2814 AraJ Arabinose efflux 99.2 7.7E-11 1.7E-15 108.4 12.4 150 106-257 236-386 (394)
159 PRK11273 glpT sn-glycerol-3-ph 99.2 9.2E-11 2E-15 114.7 13.0 150 108-257 280-435 (452)
160 PF11700 ATG22: Vacuole efflux 99.2 1.3E-10 2.8E-15 112.4 12.9 149 108-256 308-467 (477)
161 TIGR02718 sider_RhtX_FptX side 99.2 1.2E-10 2.7E-15 111.6 12.4 147 106-252 232-386 (390)
162 TIGR00712 glpT glycerol-3-phos 99.2 1.2E-10 2.5E-15 113.5 11.8 152 108-259 278-435 (438)
163 TIGR00881 2A0104 phosphoglycer 99.2 4.7E-11 1E-15 114.1 9.0 133 107-239 242-379 (379)
164 TIGR00900 2A0121 H+ Antiporter 99.2 5.9E-11 1.3E-15 112.8 9.6 129 106-234 235-365 (365)
165 PRK12307 putative sialic acid 99.2 1.1E-10 2.4E-15 113.5 10.5 137 106-242 255-393 (426)
166 PRK15075 citrate-proton sympor 99.2 1.6E-10 3.4E-15 112.5 11.5 131 106-236 262-398 (434)
167 PF06813 Nodulin-like: Nodulin 99.2 2.2E-10 4.8E-15 99.7 11.1 150 106-257 26-182 (250)
168 PRK10054 putative transporter; 99.2 1.6E-10 3.4E-15 110.8 10.8 144 110-254 237-381 (395)
169 PRK10504 putative transporter; 99.2 2.6E-10 5.6E-15 112.4 12.5 130 106-235 285-418 (471)
170 PF01306 LacY_symp: LacY proto 99.2 2.5E-10 5.4E-15 106.3 11.3 149 111-259 253-402 (412)
171 PLN00028 nitrate transmembrane 99.2 2.3E-10 5E-15 112.3 11.6 148 108-257 279-433 (476)
172 TIGR00895 2A0115 benzoate tran 99.1 8.6E-11 1.9E-15 113.1 7.8 124 106-229 274-397 (398)
173 TIGR00898 2A0119 cation transp 99.1 5.7E-10 1.2E-14 111.1 13.7 137 121-260 359-497 (505)
174 PRK11902 ampG muropeptide tran 99.1 7.5E-10 1.6E-14 106.6 13.4 146 106-255 234-388 (402)
175 PRK15402 multidrug efflux syst 99.1 9.5E-10 2.1E-14 106.2 14.0 148 108-256 242-394 (406)
176 KOG4686 Predicted sugar transp 99.1 2.1E-09 4.5E-14 92.1 13.9 173 65-257 267-442 (459)
177 TIGR00887 2A0109 phosphate:H+ 99.1 7E-10 1.5E-14 110.0 13.1 154 106-260 312-491 (502)
178 TIGR01272 gluP glucose/galacto 99.1 5.7E-10 1.2E-14 102.7 11.4 132 111-245 172-303 (310)
179 KOG2504 Monocarboxylate transp 99.1 2.5E-10 5.5E-15 111.0 9.4 152 106-257 322-476 (509)
180 PRK08633 2-acyl-glycerophospho 99.1 5.9E-10 1.3E-14 122.3 13.5 147 107-253 258-406 (1146)
181 TIGR00792 gph sugar (Glycoside 99.1 1E-09 2.3E-14 107.1 13.6 121 115-235 255-383 (437)
182 PRK10213 nepI ribonucleoside t 99.1 1.1E-09 2.4E-14 104.9 13.3 144 106-251 241-385 (394)
183 COG2271 UhpC Sugar phosphate p 99.1 1.5E-10 3.3E-15 105.3 6.7 177 65-257 252-434 (448)
184 PRK11646 multidrug resistance 99.1 5.4E-10 1.2E-14 107.3 11.0 147 106-252 232-383 (400)
185 COG2270 Permeases of the major 99.1 1.1E-09 2.4E-14 99.8 11.8 143 108-250 279-422 (438)
186 PRK10406 alpha-ketoglutarate t 99.1 1.1E-09 2.4E-14 106.5 12.6 147 108-255 270-422 (432)
187 PF03825 Nuc_H_symport: Nucleo 99.1 1.2E-09 2.6E-14 103.7 12.0 152 108-259 233-397 (400)
188 PRK10091 MFS transport protein 99.1 1.6E-09 3.4E-14 103.6 12.7 151 106-258 224-377 (382)
189 TIGR00896 CynX cyanate transpo 99.1 6.6E-10 1.4E-14 105.2 9.9 128 106-234 221-350 (355)
190 PRK06814 acylglycerophosphoeth 99.1 1.4E-09 3E-14 119.0 13.2 146 108-253 252-418 (1140)
191 KOG3762 Predicted transporter 99.0 1.8E-09 3.9E-14 100.9 11.4 148 109-256 398-546 (618)
192 KOG4332 Predicted sugar transp 99.0 2.9E-09 6.4E-14 90.4 11.7 308 106-464 61-385 (454)
193 KOG0569 Permease of the major 99.0 1.3E-09 2.9E-14 103.6 9.7 155 106-261 294-458 (485)
194 PF02487 CLN3: CLN3 protein; 99.0 4.4E-09 9.5E-14 97.4 12.8 322 120-479 62-390 (402)
195 COG2223 NarK Nitrate/nitrite t 99.0 1.4E-09 3E-14 99.2 9.2 150 107-257 244-401 (417)
196 TIGR00894 2A0114euk Na(+)-depe 99.0 2.1E-09 4.5E-14 105.7 11.2 149 108-257 288-450 (465)
197 TIGR02332 HpaX 4-hydroxyphenyl 99.0 1.8E-09 3.9E-14 104.2 9.7 140 106-245 266-409 (412)
198 PRK14995 methyl viologen resis 99.0 5.8E-09 1.3E-13 103.2 12.5 124 107-230 285-411 (495)
199 PRK11195 lysophospholipid tran 98.9 1.1E-08 2.3E-13 98.1 13.2 144 108-253 232-376 (393)
200 TIGR00711 efflux_EmrB drug res 98.9 3.4E-09 7.4E-14 105.0 9.7 127 108-234 282-412 (485)
201 PRK10133 L-fucose transporter; 98.9 7.4E-09 1.6E-13 100.4 10.9 140 109-251 287-427 (438)
202 TIGR00710 efflux_Bcr_CflA drug 98.9 1.9E-08 4.2E-13 96.4 13.5 133 108-242 233-371 (385)
203 COG0477 ProP Permeases of the 98.9 6.6E-09 1.4E-13 96.3 9.7 144 106-249 26-177 (338)
204 TIGR00901 2A0125 AmpG-related 98.9 4.1E-09 8.9E-14 99.8 8.3 111 106-216 233-355 (356)
205 PRK10473 multidrug efflux syst 98.9 6.1E-09 1.3E-13 100.1 9.5 134 108-246 230-363 (392)
206 PRK09848 glucuronide transport 98.9 8.7E-09 1.9E-13 100.8 10.7 128 108-235 255-391 (448)
207 PF13347 MFS_2: MFS/sugar tran 98.8 4.6E-08 9.9E-13 95.1 14.0 122 112-234 256-386 (428)
208 PF06963 FPN1: Ferroportin1 (F 98.8 1.8E-07 4E-12 88.5 17.0 322 123-468 44-401 (432)
209 KOG3762 Predicted transporter 98.8 2.6E-09 5.7E-14 99.9 4.5 164 318-486 359-522 (618)
210 TIGR00924 yjdL_sub1_fam amino 98.8 5.3E-08 1.2E-12 95.4 13.4 140 119-258 314-469 (475)
211 TIGR00788 fbt folate/biopterin 98.8 2E-08 4.4E-13 98.1 10.4 125 110-234 281-415 (468)
212 PRK11043 putative transporter; 98.8 6.9E-08 1.5E-12 93.1 13.6 131 106-237 227-362 (401)
213 TIGR00903 2A0129 major facilit 98.8 4.4E-08 9.5E-13 92.6 11.1 143 106-254 216-362 (368)
214 TIGR00769 AAA ADP/ATP carrier 98.8 2.5E-07 5.5E-12 88.6 16.0 253 106-395 27-333 (472)
215 PF06779 DUF1228: Protein of u 98.8 1.7E-09 3.6E-14 75.8 0.7 77 98-174 8-84 (85)
216 KOG0253 Synaptic vesicle trans 98.8 1.1E-08 2.5E-13 91.1 6.0 129 127-257 391-519 (528)
217 PF07690 MFS_1: Major Facilita 98.8 1.5E-08 3.2E-13 95.8 7.4 118 106-223 230-352 (352)
218 TIGR00926 2A1704 Peptide:H+ sy 98.8 1.6E-07 3.5E-12 94.2 15.0 149 108-256 14-181 (654)
219 KOG0637 Sucrose transporter an 98.8 4.9E-08 1.1E-12 89.8 9.9 125 106-230 56-203 (498)
220 COG2807 CynX Cyanate permease 98.7 1.5E-07 3.2E-12 84.3 12.2 151 106-257 232-385 (395)
221 PRK11102 bicyclomycin/multidru 98.7 1.8E-07 3.8E-12 89.4 13.3 120 108-228 221-345 (377)
222 PRK10429 melibiose:sodium symp 98.7 1.1E-07 2.3E-12 93.6 11.9 128 108-235 257-396 (473)
223 PRK15034 nitrate/nitrite trans 98.7 1.3E-07 2.9E-12 90.5 12.0 135 123-257 292-454 (462)
224 KOG3810 Micronutrient transpor 98.7 2.1E-08 4.6E-13 88.5 5.6 329 110-468 34-370 (433)
225 KOG3098 Uncharacterized conser 98.7 1.2E-07 2.7E-12 89.4 10.9 305 120-472 52-400 (461)
226 PRK09669 putative symporter Ya 98.7 1.3E-07 2.7E-12 92.5 11.4 119 117-235 264-391 (444)
227 KOG3764 Vesicular amine transp 98.7 3.1E-08 6.8E-13 89.4 5.7 149 108-256 297-453 (464)
228 PRK09584 tppB putative tripept 98.7 1.5E-07 3.2E-12 92.9 10.7 140 119-258 318-480 (500)
229 PRK15462 dipeptide/tripeptide 98.6 3.1E-09 6.6E-14 102.7 -1.7 153 328-486 7-164 (493)
230 TIGR00885 fucP L-fucose:H+ sym 98.6 2.1E-07 4.6E-12 89.5 10.4 130 113-245 265-400 (410)
231 TIGR00886 2A0108 nitrite extru 98.6 8.3E-09 1.8E-13 98.2 0.1 143 332-481 3-147 (366)
232 KOG3574 Acetyl-CoA transporter 98.6 6E-06 1.3E-10 74.4 17.1 352 66-486 32-431 (510)
233 PRK10207 dipeptide/tripeptide 98.6 5.3E-07 1.1E-11 88.6 11.5 139 120-258 312-477 (489)
234 PF00083 Sugar_tr: Sugar (and 98.5 3.1E-09 6.8E-14 104.1 -4.5 153 106-260 277-439 (451)
235 PRK11652 emrD multidrug resist 98.5 1.4E-06 3E-11 83.8 13.3 128 108-236 234-364 (394)
236 PF05978 UNC-93: Ion channel r 98.5 8.6E-07 1.9E-11 71.3 9.7 115 114-229 34-148 (156)
237 PF03209 PUCC: PUCC protein; 98.5 2.4E-06 5.3E-11 78.6 13.0 148 106-253 233-394 (403)
238 KOG2532 Permease of the major 98.4 7E-07 1.5E-11 86.1 8.4 150 107-256 284-446 (466)
239 TIGR00880 2_A_01_02 Multidrug 98.4 1E-07 2.2E-12 76.7 2.0 109 372-486 5-113 (141)
240 COG2211 MelB Na+/melibiose sym 98.4 4.8E-06 1E-10 78.9 12.4 125 108-232 263-396 (467)
241 PRK11462 putative transporter; 98.3 3.5E-06 7.6E-11 82.4 10.9 120 116-235 262-390 (460)
242 PF06609 TRI12: Fungal trichot 98.3 6.2E-06 1.4E-10 81.1 11.8 110 118-227 350-462 (599)
243 COG0738 FucP Fucose permease [ 98.3 2.9E-06 6.4E-11 77.4 8.3 142 106-250 260-402 (422)
244 TIGR01301 GPH_sucrose GPH fami 98.3 9.7E-06 2.1E-10 78.4 12.2 141 120-260 308-474 (477)
245 KOG0254 Predicted transporter 98.2 1.5E-05 3.3E-10 79.3 12.8 154 106-260 319-486 (513)
246 TIGR00806 rfc RFC reduced fola 98.2 3.3E-07 7.2E-12 86.4 0.6 123 353-482 48-172 (511)
247 PRK15403 multidrug efflux syst 98.1 3.4E-05 7.4E-10 74.5 12.7 142 106-249 242-389 (413)
248 PF13000 Acatn: Acetyl-coenzym 98.1 0.00073 1.6E-08 63.9 19.7 152 317-472 265-454 (544)
249 KOG1330 Sugar transporter/spin 98.1 3.7E-06 8E-11 78.1 4.2 121 360-486 62-183 (493)
250 PTZ00207 hypothetical protein; 98.0 2E-05 4.4E-10 78.0 9.4 150 106-257 377-552 (591)
251 KOG1237 H+/oligopeptide sympor 98.0 4E-05 8.7E-10 75.8 11.2 151 106-256 62-244 (571)
252 TIGR00805 oat sodium-independe 98.0 1.6E-06 3.4E-11 87.8 1.5 124 356-485 58-233 (633)
253 KOG0252 Inorganic phosphate tr 97.9 4.6E-06 9.9E-11 77.2 2.0 127 133-260 364-500 (538)
254 KOG2816 Predicted transporter 97.9 0.00013 2.9E-09 70.2 11.4 123 107-230 267-390 (463)
255 KOG2615 Permease of the major 97.9 4.9E-05 1.1E-09 68.9 7.7 124 109-232 289-414 (451)
256 PF03219 TLC: TLC ATP/ADP tran 97.8 0.0007 1.5E-08 65.7 15.3 244 115-395 56-349 (491)
257 TIGR00939 2a57 Equilibrative N 97.7 0.00033 7.1E-09 67.4 11.8 57 421-478 370-426 (437)
258 PF00854 PTR2: POT family; In 97.7 8.5E-05 1.8E-09 70.7 7.6 108 148-255 2-121 (372)
259 PF02487 CLN3: CLN3 protein; 97.7 0.0001 2.3E-09 68.8 6.8 114 112-229 276-394 (402)
260 KOG2533 Permease of the major 97.7 0.00013 2.8E-09 70.9 7.5 139 106-244 297-443 (495)
261 PF12832 MFS_1_like: MFS_1 lik 97.7 3E-05 6.5E-10 54.2 2.3 52 106-157 24-75 (77)
262 KOG0255 Synaptic vesicle trans 97.6 0.00039 8.5E-09 69.6 10.8 138 125-263 358-498 (521)
263 KOG3880 Predicted small molecu 97.3 0.00081 1.8E-08 59.2 6.7 135 120-259 65-201 (409)
264 COG3202 ATP/ADP translocase [E 97.2 0.013 2.8E-07 55.6 14.8 126 106-231 47-209 (509)
265 COG3104 PTR2 Dipeptide/tripept 97.1 0.0035 7.6E-08 59.6 10.0 142 118-259 325-489 (498)
266 PRK03612 spermidine synthase; 97.1 0.006 1.3E-07 60.3 11.8 136 108-245 41-185 (521)
267 KOG1479 Nucleoside transporter 97.1 0.014 3.1E-07 54.4 12.9 58 420-478 340-397 (406)
268 PF07672 MFS_Mycoplasma: Mycop 96.7 0.018 4E-07 50.0 9.8 55 202-256 2-61 (267)
269 PF03092 BT1: BT1 family; Int 96.7 0.0043 9.4E-08 60.1 6.9 145 114-258 252-414 (433)
270 PF12832 MFS_1_like: MFS_1 lik 96.6 0.00098 2.1E-08 46.5 1.3 60 336-396 6-66 (77)
271 TIGR00939 2a57 Equilibrative N 96.3 0.13 2.7E-06 49.9 14.1 61 168-228 370-430 (437)
272 PF06813 Nodulin-like: Nodulin 96.2 0.0012 2.6E-08 57.9 -0.1 120 345-472 17-144 (250)
273 KOG3098 Uncharacterized conser 96.2 0.15 3.3E-06 49.0 13.7 105 122-227 280-409 (461)
274 KOG2563 Permease of the major 96.1 0.01 2.2E-07 55.7 5.3 150 110-259 294-452 (480)
275 PF06963 FPN1: Ferroportin1 (F 95.9 0.028 6E-07 53.9 7.4 120 111-230 287-416 (432)
276 PF01733 Nucleoside_tran: Nucl 95.8 0.0016 3.4E-08 60.1 -1.2 58 421-479 246-303 (309)
277 KOG2325 Predicted transporter/ 95.4 0.042 9.2E-07 52.9 6.9 83 171-253 388-471 (488)
278 PF03137 OATP: Organic Anion T 94.9 0.0071 1.5E-07 60.1 0.0 127 106-232 330-514 (539)
279 KOG0637 Sucrose transporter an 94.0 0.22 4.7E-06 47.2 7.5 133 119-251 334-490 (498)
280 TIGR00926 2A1704 Peptide:H+ sy 93.5 0.022 4.8E-07 57.9 0.2 133 346-484 3-148 (654)
281 PF05978 UNC-93: Ion channel r 93.5 0.043 9.3E-07 44.3 1.7 100 372-478 44-143 (156)
282 PF01770 Folate_carrier: Reduc 93.0 0.16 3.5E-06 48.0 5.0 99 115-213 283-383 (412)
283 KOG3097 Predicted membrane pro 92.3 0.42 9.1E-06 43.2 6.3 75 125-200 66-140 (390)
284 PF05631 DUF791: Protein of un 92.3 0.021 4.6E-07 52.3 -1.7 98 360-463 63-166 (354)
285 KOG4332 Predicted sugar transp 92.0 2 4.4E-05 37.8 9.8 135 119-253 284-427 (454)
286 PF01733 Nucleoside_tran: Nucl 91.9 0.052 1.1E-06 50.0 0.3 107 122-228 187-306 (309)
287 PF06779 DUF1228: Protein of u 90.7 0.071 1.5E-06 37.7 -0.1 72 347-424 9-81 (85)
288 COG0477 ProP Permeases of the 89.2 0.05 1.1E-06 49.8 -2.4 109 370-483 44-155 (338)
289 KOG2601 Iron transporter [Inor 88.0 2.5 5.5E-05 39.2 7.5 122 127-248 73-217 (503)
290 TIGR00769 AAA ADP/ATP carrier 85.3 11 0.00024 36.9 11.0 74 176-249 272-346 (472)
291 KOG3880 Predicted small molecu 85.2 2.5 5.4E-05 38.1 5.9 115 110-229 280-401 (409)
292 KOG1479 Nucleoside transporter 84.0 4.5 9.7E-05 38.3 7.3 106 120-227 285-400 (406)
293 PF06912 DUF1275: Protein of u 83.3 16 0.00035 31.3 10.2 46 197-243 153-198 (209)
294 PF03219 TLC: TLC ATP/ADP tran 81.4 21 0.00046 35.2 11.3 75 177-251 289-364 (491)
295 KOG3574 Acetyl-CoA transporter 81.1 1.3 2.7E-05 41.2 2.6 143 330-479 31-188 (510)
296 KOG3626 Organic anion transpor 80.1 5.9 0.00013 40.6 7.1 62 170-231 586-648 (735)
297 PF03547 Mem_trans: Membrane t 76.7 47 0.001 31.7 12.2 25 320-344 235-259 (385)
298 PRK03612 spermidine synthase; 73.8 0.47 1E-05 47.2 -2.4 54 428-483 115-168 (521)
299 KOG3810 Micronutrient transpor 73.5 10 0.00022 35.1 6.0 132 120-254 274-418 (433)
300 COG4769 Predicted membrane pro 72.6 11 0.00024 30.2 5.3 54 125-184 81-134 (181)
301 COG5336 Uncharacterized protei 71.9 9.6 0.00021 28.0 4.4 37 120-156 45-82 (116)
302 PF13000 Acatn: Acetyl-coenzym 71.5 11 0.00024 36.7 6.1 64 172-235 407-470 (544)
303 PF11299 DUF3100: Protein of u 71.2 16 0.00034 31.4 6.2 123 75-228 106-228 (241)
304 COG4262 Predicted spermidine s 70.5 24 0.00053 32.6 7.6 85 113-197 39-132 (508)
305 PF02535 Zip: ZIP Zinc transpo 60.5 1.4E+02 0.003 27.5 13.5 35 169-203 259-294 (317)
306 KOG2881 Predicted membrane pro 56.8 41 0.00089 29.5 6.2 21 326-346 203-223 (294)
307 KOG4830 Predicted sugar transp 56.6 0.79 1.7E-05 39.9 -3.9 42 323-364 194-235 (412)
308 PRK10263 DNA translocase FtsK; 55.8 59 0.0013 36.0 8.5 20 217-236 142-161 (1355)
309 PF07672 MFS_Mycoplasma: Mycop 54.5 72 0.0016 28.4 7.5 92 122-213 146-249 (267)
310 TIGR00844 c_cpa1 na(+)/h(+) an 51.2 3.3E+02 0.0071 28.9 14.1 37 210-246 105-141 (810)
311 PF11151 DUF2929: Protein of u 49.1 71 0.0015 20.7 6.0 43 214-256 10-52 (57)
312 COG3202 ATP/ADP translocase [E 48.8 2.8E+02 0.0061 27.4 11.8 76 178-253 292-369 (509)
313 COG2233 UraA Xanthine/uracil p 48.3 1.5E+02 0.0033 28.8 9.2 98 108-205 40-140 (451)
314 PF11947 DUF3464: Protein of u 47.8 23 0.00049 28.4 3.1 51 168-221 95-145 (153)
315 COG2119 Predicted membrane pro 44.3 62 0.0013 26.8 5.1 73 70-161 106-178 (190)
316 COG5336 Uncharacterized protei 43.4 55 0.0012 24.3 4.2 21 376-396 53-73 (116)
317 PF02694 UPF0060: Uncharacteri 42.4 45 0.00098 24.7 3.7 52 117-168 54-105 (107)
318 PF02632 BioY: BioY family; I 42.1 92 0.002 25.0 5.9 26 123-148 59-84 (148)
319 PF02990 EMP70: Endomembrane p 39.6 70 0.0015 32.1 6.0 25 373-397 305-329 (521)
320 PF06645 SPC12: Microsomal sig 39.2 1.3E+02 0.0028 20.9 5.9 51 208-264 10-60 (76)
321 PF07456 Hpre_diP_synt_I: Hept 39.1 1E+02 0.0023 24.7 5.6 52 123-180 67-118 (148)
322 COG1230 CzcD Co/Zn/Cd efflux s 37.6 1.4E+02 0.0029 27.3 6.8 35 204-238 153-187 (296)
323 PF12805 FUSC-like: FUSC-like 36.7 1.9E+02 0.0042 26.2 7.9 37 151-187 3-40 (284)
324 PRK02237 hypothetical protein; 35.5 83 0.0018 23.4 4.2 51 118-168 57-107 (109)
325 PRK10720 uracil transporter; P 35.2 2.3E+02 0.0049 27.6 8.5 30 235-264 383-412 (428)
326 COG1268 BioY Uncharacterized c 34.9 1.2E+02 0.0026 25.4 5.6 25 123-147 88-112 (184)
327 KOG1237 H+/oligopeptide sympor 33.0 91 0.002 31.7 5.6 81 150-230 421-518 (571)
328 KOG2765 Predicted membrane pro 32.5 1.1E+02 0.0024 28.7 5.4 14 141-154 208-221 (416)
329 PF10183 ESSS: ESSS subunit of 32.2 59 0.0013 24.3 3.1 30 230-259 54-83 (105)
330 TIGR00927 2A1904 K+-dependent 31.2 5.5E+02 0.012 27.9 10.5 55 107-163 958-1012(1096)
331 PF04226 Transgly_assoc: Trans 29.9 1.4E+02 0.0031 18.5 4.6 37 217-253 6-42 (48)
332 PRK13629 threonine/serine tran 29.3 2.3E+02 0.0049 27.7 7.2 50 199-253 17-66 (443)
333 TIGR03173 pbuX xanthine permea 28.1 5.5E+02 0.012 24.7 10.1 96 109-205 20-116 (406)
334 PF07760 DUF1616: Protein of u 27.7 4.7E+02 0.01 23.8 12.0 68 160-229 10-77 (287)
335 PLN02332 membrane bound O-acyl 27.7 6E+02 0.013 25.1 10.1 33 145-177 339-371 (465)
336 PRK11588 hypothetical protein; 27.3 6.4E+02 0.014 25.2 12.5 39 137-175 136-176 (506)
337 PF12273 RCR: Chitin synthesis 27.2 31 0.00068 26.9 1.0 21 236-256 1-21 (130)
338 TIGR02230 ATPase_gene1 F0F1-AT 26.9 2.6E+02 0.0057 20.6 6.0 32 215-246 52-87 (100)
339 TIGR01667 YCCS_YHJK integral m 25.8 2.8E+02 0.006 29.2 7.7 54 134-187 40-98 (701)
340 COG2962 RarD Predicted permeas 25.4 1.5E+02 0.0033 26.7 4.9 35 320-354 59-93 (293)
341 PF07857 DUF1632: CEO family ( 25.3 3.8E+02 0.0083 23.9 7.4 14 113-126 214-227 (254)
342 PF03596 Cad: Cadmium resistan 25.3 3.9E+02 0.0084 22.6 7.1 15 345-359 109-123 (191)
343 TIGR01666 YCCS hypothetical me 25.0 2.9E+02 0.0062 29.1 7.6 53 135-187 41-98 (704)
344 PRK14229 camphor resistance pr 25.0 3E+02 0.0065 20.6 6.9 47 154-200 33-79 (108)
345 PF11833 DUF3353: Protein of u 24.9 4.3E+02 0.0093 22.4 7.3 31 201-231 136-166 (194)
346 COG3619 Predicted membrane pro 24.8 4.7E+02 0.01 22.8 12.8 119 116-234 54-196 (226)
347 PF10785 NADH-u_ox-rdase: NADH 24.8 1.5E+02 0.0033 21.1 4.0 46 125-170 26-78 (86)
348 PRK00293 dipZ thiol:disulfide 24.6 7.7E+02 0.017 25.2 15.1 23 213-235 213-235 (571)
349 COG3771 Predicted membrane pro 24.0 1.2E+02 0.0027 21.4 3.2 30 109-142 36-65 (97)
350 PF03741 TerC: Integral membra 23.5 2.5E+02 0.0055 23.5 5.7 58 186-245 12-69 (183)
351 COG0861 TerC Membrane protein 23.4 5.4E+02 0.012 23.0 8.3 59 184-244 30-88 (254)
352 TIGR00836 amt ammonium transpo 22.8 4.5E+02 0.0097 25.4 7.9 51 176-226 281-331 (403)
353 PF07099 DUF1361: Protein of u 22.7 1.7E+02 0.0036 24.1 4.5 35 106-140 43-84 (168)
354 COG4177 LivM ABC-type branched 22.0 2.9E+02 0.0063 25.6 6.3 60 170-230 208-267 (314)
355 KOG1397 Ca2+/H+ antiporter VCX 21.9 86 0.0019 29.5 2.8 17 106-122 314-330 (441)
356 PF04346 EutH: Ethanolamine ut 21.7 6.8E+02 0.015 23.5 10.0 122 119-244 49-174 (354)
357 TIGR03644 marine_trans_1 proba 21.6 7.4E+02 0.016 24.0 11.7 48 178-226 297-344 (404)
358 PF11511 RhodobacterPufX: Intr 21.5 2.7E+02 0.0057 18.7 4.6 28 234-261 29-56 (67)
359 PRK10263 DNA translocase FtsK; 21.0 1.3E+03 0.028 26.5 11.4 21 375-395 141-161 (1355)
360 PF07857 DUF1632: CEO family ( 20.6 5E+02 0.011 23.2 7.2 18 344-361 192-209 (254)
361 PF05255 UPF0220: Uncharacteri 20.4 1.9E+02 0.004 23.8 4.2 60 197-256 13-78 (166)
362 KOG2082 K+/Cl- cotransporter K 20.2 9.8E+02 0.021 25.4 9.7 37 148-190 497-533 (1075)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=297.08 Aligned_cols=379 Identities=16% Similarity=0.144 Sum_probs=307.6
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
.+++++..+++++...|+.|.+++.+ +|.+.+|.++|..|+|++.|.+++.++++-++.|.++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a-----------------~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~s 88 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLA-----------------MPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLS 88 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhc-----------------cHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 34568888899999999999999874 5999999999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
||.++|..+.+++++.++.+++++++++++.+.+..+++|..+|.-+|.+...+..|++++|||+..++++++-++|..+
T Consensus 89 Dr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal 168 (448)
T COG2271 89 DRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGAL 168 (448)
T ss_pred ccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH--HhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhh
Q 011369 222 GYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA 299 (487)
Q Consensus 222 g~~~~--~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (487)
.|++. +.+..+.+||..|++.++++++.+++.++..+++|....-++-++...+. .+..+
T Consensus 169 ~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~---------------~e~~~--- 230 (448)
T COG2271 169 APLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDP---------------LEIYE--- 230 (448)
T ss_pred HHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCc---------------hhhhh---
Confidence 99999 89999899999999999999999999999887765544333222111000 00000
Q ss_pred hhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeeccc
Q 011369 300 SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCG 378 (487)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~ 378 (487)
++++.+ .....-.-.+.+++||.+|.+++.+++....-+++..|.|.|+.|..|++...+ ...+.+-+++
T Consensus 231 -~~~~~~--------~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ag 301 (448)
T COG2271 231 -EEKENE--------GLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAG 301 (448)
T ss_pred -hhccCC--------CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 000000 000001235568999999999999999999999999999999999999997776 5556778999
Q ss_pred chhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCc
Q 011369 379 IVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 456 (487)
Q Consensus 379 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (487)
++|++++||++||+.+.++. +..++..+...++.......+ +.+...++++..|++..+-+..+-....|..|++.
T Consensus 302 l~G~Ll~GwlSDklfkgrR~--p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A 379 (448)
T COG2271 302 LPGTLLAGWLSDKLFKGRRG--PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA 379 (448)
T ss_pred hHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh
Confidence 99999999999998633221 344444444444444444443 34666777777787777776666677888898899
Q ss_pred hhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 457 RALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 457 r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.|++.|+...+.+..|++.+....|++.|.
T Consensus 380 aGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~ 409 (448)
T COG2271 380 AGTATGFVGLFAYLIGAALAGLPLGYIADT 409 (448)
T ss_pred ccchhchhhhHHHHhhHHhcCCcceeeEec
Confidence 999999986666666999999999999885
No 2
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-39 Score=288.89 Aligned_cols=374 Identities=37% Similarity=0.594 Sum_probs=299.5
Q ss_pred CCccccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHH
Q 011369 58 PSWFTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIF 137 (487)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~ 137 (487)
..++..++.+.++++...+++.|+..+... ++.+++.||++++..|++.+.+.+.+.+++|+.
T Consensus 26 ~~~~~~~~~l~il~~vnlmny~Dr~~iagv-----------------~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~ 88 (493)
T KOG1330|consen 26 LSMKSPTLTLVILCLVNLMNYADRYTIAGV-----------------LKEVQTYFNISDSELGLLQTVFIVVFMIASPLF 88 (493)
T ss_pred cccccchHHHHHHHHHHHHHHhhhhhhhhh-----------------hHHHHHhcCCCchhccchhHHHHHHHHHHHHHH
Confidence 345556678999999999999999998864 389999999999999999999999999999999
Q ss_pred HHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh
Q 011369 138 ASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT 217 (487)
Q Consensus 138 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 217 (487)
|+++|||.||+++.+|.++|.++.++++++..||++.++|.+.|+|.+...|.++++++|.+|..+|++++++++.+..+
T Consensus 89 gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv 168 (493)
T KOG1330|consen 89 GYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV 168 (493)
T ss_pred HHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccch
Q 011369 218 GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDIS 296 (487)
Q Consensus 218 G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (487)
|..+|.+.+..+.++.+ |||.|+..++++++++++.+++.+|+++...++.+.+...
T Consensus 169 GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~---------------------- 226 (493)
T KOG1330|consen 169 GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM---------------------- 226 (493)
T ss_pred ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC----------------------
Confidence 99999999999988766 9999999999999999999999877544311111100000
Q ss_pred hhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccc---c-ccceeeec
Q 011369 297 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM---S-NADMMFGG 372 (487)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~---~-~~~~~~~~ 372 (487)
.+...+.+++.+.+.+++.+....+.+....+....+..|.|.+.+..+.+ + .....+..
T Consensus 227 ----------------~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~ 290 (493)
T KOG1330|consen 227 ----------------VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGG 290 (493)
T ss_pred ----------------CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhh
Confidence 022345567888888889888888888888888888888888876554322 2 23346677
Q ss_pred eeecccchhhhhhhhhHhhhcccchhhh-----HHHH-HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCCCe
Q 011369 373 VTIVCGIVGTISGGFILDQMGATISNAF-----KLLS-AATFLGAISCLTAF--CLSSLYGFLALFTVGELLVFATQAPV 444 (487)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (487)
+...++.+|.+++|.++||+.++.++.. .... .+....+..+.+.. ...+.+..+++.++.-......+.+.
T Consensus 291 vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n 370 (493)
T KOG1330|consen 291 VTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATN 370 (493)
T ss_pred HHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccc
Confidence 8889999999999999999766433310 1111 11122222222222 12344555555555555666778888
Q ss_pred eEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 445 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 445 ~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
..+..+.+||+.|.++.++...+...+|.+.+|++.|.+.|+
T Consensus 371 ~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~ 412 (493)
T KOG1330|consen 371 NPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDK 412 (493)
T ss_pred cceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHH
Confidence 899999999999999999998888999999999999999886
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=1.8e-38 Score=304.82 Aligned_cols=381 Identities=17% Similarity=0.214 Sum_probs=269.9
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
+|+++..+++.++++++|+.+++.. .|.+++|+|++..+.|++.+++.+++++++++.|+++|
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 68 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFA-----------------GLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLA 68 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHH-----------------HHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4568888888999999999999875 38899999999999999999999999999999999999
Q ss_pred hcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhH
Q 011369 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (487)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (487)
|+|||+++..++++++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|..++
T Consensus 69 r~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 69 IIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcc------ccchHHHHHHHHHHHHHHHHHHhhccccccCCCCC-CCcccchhhcccccCcccCCCcccccccc
Q 011369 223 YVYGGVVGS------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP-AESGKAQVVASVSEGSEASNLNDHVSEDI 295 (487)
Q Consensus 223 ~~~~~~l~~------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (487)
+++++.+.+ ..|||+.|++.+++.++..++.+++.||++++.+. .+++++...+.... +..+. ++..+..
T Consensus 149 ~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~--~~~~~-~~~~~~~ 225 (412)
T TIGR02332 149 LILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDN--DQLTL-EQPEGAF 225 (412)
T ss_pred HHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHh--ccccc-ccccccc
Confidence 999988763 46999999999998887777777777775533110 00000000000000 00000 0000000
Q ss_pred hhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeec-ccccccce-eeece
Q 011369 296 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADM-MFGGV 373 (487)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~-~~~~~ 373 (487)
. +........++.++ ++.+|...+.+++.....+.+.+|+|.++++. .+.+.... .....
T Consensus 226 ---------~--------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~ 287 (412)
T TIGR02332 226 ---------A--------HAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAI 287 (412)
T ss_pred ---------c--------cccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhH
Confidence 0 00000011233333 57788888877877778888889999999873 35554444 45567
Q ss_pred eecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC
Q 011369 374 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK 453 (487)
Q Consensus 374 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (487)
..++.+++.++.|+++||+++|+ ...........+...+.....+....+...++..++.....+.......+..|
T Consensus 288 ~~l~~~~g~l~~g~l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 363 (412)
T TIGR02332 288 PQFCTIFGMIWWSRHSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSIS 363 (412)
T ss_pred HHHHHHHHHHHHHHHhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccc
Confidence 77889999999999999999773 12222222222222222222222222222222222222222222333345677
Q ss_pred CCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 454 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 454 ~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.|+++.|+. .....+|++++|.+.|.+.|.
T Consensus 364 ~~~~~~a~g~~-~~~~~~g~~~~p~~~g~i~~~ 395 (412)
T TIGR02332 364 LQARAIAIAVI-NATGNIGSALSPFLIGILKDA 395 (412)
T ss_pred hHHHHHHHHHH-HHhhhhhhhhhhhhccccccc
Confidence 89999999998 556667889999999999885
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-38 Score=287.82 Aligned_cols=346 Identities=18% Similarity=0.190 Sum_probs=283.2
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 145 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G 145 (487)
.+..+.++.|....+...... .+|++.+|+|+|..+.|+..|+|.++..++.++...+.||+.
T Consensus 14 ~l~aLa~~~F~igttEfv~~g-----------------LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~ 76 (394)
T COG2814 14 ALLALALAAFAIGTTEFVPVG-----------------LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLE 76 (394)
T ss_pred HHHHHHHHHHHHHhHHHHHHh-----------------chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 444555555555554444443 359999999999999999999999999999999999999999
Q ss_pred CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHH
Q 011369 146 PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 225 (487)
Q Consensus 146 rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 225 (487)
||++++..+.++.++++++++++||+.++++|++.|+..|.+++....+..+..|+++|++++++...+..++.++|.++
T Consensus 77 Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPL 156 (394)
T COG2814 77 RRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPL 156 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhc
Q 011369 226 GGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIK 305 (487)
Q Consensus 226 ~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (487)
|.++.+.+|||++|++.++++++..+..+..+| +++ .+++.+..
T Consensus 157 Gt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~-------------------------------- 200 (394)
T COG2814 157 GTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSE--ISGSLPGP-------------------------------- 200 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcc--------------------------------
Confidence 999999999999999999999999999988888 111 11111000
Q ss_pred cccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhh
Q 011369 306 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTIS 384 (487)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 384 (487)
.++..+++|+|.++...+..++...+.+...+|+..++++..|++.... .....+++++++|..+
T Consensus 201 --------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~ 266 (394)
T COG2814 201 --------------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLL 266 (394)
T ss_pred --------------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHH
Confidence 1223457899999999999999999999999999999999999987666 6667888999999999
Q ss_pred hhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHH
Q 011369 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 463 (487)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~ 463 (487)
+|++.|| +.| +.+.....+.+...+.+. ...+.+...+..+++++..............+ .-|+.++.+.++
T Consensus 267 gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl 339 (394)
T COG2814 267 GGRLADR-GPR-----RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSL 339 (394)
T ss_pred Hhhhccc-cch-----hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHH
Confidence 9999999 665 555555444444444444 34455556666666776666655555555555 446889999999
Q ss_pred HHHHHHhhcCCCccceeeeeecc
Q 011369 464 STVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 464 ~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+ .....+|..+|..++|.+.|+
T Consensus 340 ~-~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 340 N-VAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHh
Confidence 6 666666888999999988875
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=2.9e-38 Score=308.93 Aligned_cols=373 Identities=15% Similarity=0.120 Sum_probs=268.6
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
.++++..+++.++..+.|+.+++.. +|.+.+|+|++..+.|++.+++.+++++++++.|+++|
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~-----------------~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~D 89 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAA-----------------QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYAD 89 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhh-----------------hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 4557778888899999999999864 48999999999999999999999999999999999999
Q ss_pred hcCCCeEehhHHHHHHHHHHHhhc-----chhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh
Q 011369 143 SHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT 217 (487)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 217 (487)
|+|||+++.+++++++++.++.++ ++|++.+++.|+++|++.+...+....+++||+|+++||+++|++..+.++
T Consensus 90 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l 169 (467)
T PRK09556 90 GKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL 169 (467)
T ss_pred ccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch
Confidence 999999999988888777766554 689999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHhhcccc---chHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCccccccc
Q 011369 218 GVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (487)
Q Consensus 218 G~~~g~~~~~~l~~~~---~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (487)
|.+++++++..+.... +||..|.+.+++.++..++.+++.++.+++....++++ .. .+... ++
T Consensus 170 G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~------~~---~~~~~-~~---- 235 (467)
T PRK09556 170 GGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE------IF---GEPIS-EE---- 235 (467)
T ss_pred hhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh------cc---cCccc-hh----
Confidence 9999999887766543 69999999888888777766666555332211100000 00 00000 00
Q ss_pred chhhhhhhhhccccccchhhhhhhhhHH-HHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeec
Q 011369 295 ISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (487)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (487)
....+.+. .. ..+. .+..+++|.+|...+..++......+..+|.|.|+++.+|.+..+. ....
T Consensus 236 ----~~~~~~~~-------~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~ 301 (467)
T PRK09556 236 ----DKETESTD-------MT---KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFT 301 (467)
T ss_pred ----hhcccccc-------Cc---HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 00000000 00 0011 2236789999998888888877777788999999988888886655 4445
Q ss_pred eeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEe
Q 011369 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-LTAF-CLSSLYGFLALFTVGELLVFATQAPVNYVCLH 450 (487)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (487)
...++.+++.+++|+++||+++|+ ............. +... ...+.+...+..++.+++.............+
T Consensus 302 ~~~~~~~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 376 (467)
T PRK09556 302 LFEIGALVGSLLWGWLSDLANGRR-----ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVG 376 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 667788999999999999999883 3322222222211 1111 12233333344444443332222222234458
Q ss_pred ecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 451 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 451 ~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
..|++.+|++.|+.+...+..|.+++|.+.|++.|
T Consensus 377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 88889999999998665565677899999999988
No 6
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.1e-37 Score=311.30 Aligned_cols=400 Identities=15% Similarity=0.135 Sum_probs=281.0
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
..|+++.+++++.+...+|...++.. +|.+.++++++..+.+++.+++.++.+++++++|+++
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~i-----------------lp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~Ls 226 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFV-----------------LPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLA 226 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777777788888877653 4889999999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
||+|||+++++++++.+++.++++++++++.++++|++.|++.|+..+....++.|++|+++|++.++++..++.+|.++
T Consensus 227 DR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~il 306 (742)
T TIGR01299 227 DKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIY 306 (742)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccc-------------cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCc---ccchhhcccccCcccC
Q 011369 222 GYVYGGVVGSH-------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES---GKAQVVASVSEGSEAS 285 (487)
Q Consensus 222 g~~~~~~l~~~-------------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 285 (487)
++.++..+... .+||+.+++.+++.++. ++..+++||++++...+.+ ..+..++....+....
T Consensus 307 a~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~ 385 (742)
T TIGR01299 307 AAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAK 385 (742)
T ss_pred HHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCc
Confidence 99887666532 36999999887765554 4455666888766432222 1111111111000000
Q ss_pred -CCcccc-cccchhhhhhh-----hhccccc-----cchhhhhhhhhHHHHhhhcc---hhHHHHHHHHHHHHhhheeee
Q 011369 286 -NLNDHV-SEDISDQASER-----SIKSIGE-----SRFLNQLSQFSQDTKVLLQE---KVYVVNVLGYIAYNFVIGAYS 350 (487)
Q Consensus 286 -~~~~~~-~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 350 (487)
...... .+..+...... ....... .+........+..++.+++. ++.+..++.++...++++++.
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~ 465 (742)
T TIGR01299 386 GHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLS 465 (742)
T ss_pred CchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 00000000000 0000000 00000111222334444443 345666777788888899999
Q ss_pred ecccceeeec----c-------------------------------------cc-----c---------------c----
Q 011369 351 YWGPKAGYNI----Y-------------------------------------HM-----S---------------N---- 365 (487)
Q Consensus 351 ~~~p~~~~~~----~-------------------------------------~~-----~---------------~---- 365 (487)
.|+|.++++. + ++ . .
T Consensus 466 ~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (742)
T TIGR01299 466 VWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTF 545 (742)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchh
Confidence 9999764321 0 00 0 0
Q ss_pred -------------------------------------------------c-ceeeeceeecccchhhhhhhhhHhhhccc
Q 011369 366 -------------------------------------------------A-DMMFGGVTIVCGIVGTISGGFILDQMGAT 395 (487)
Q Consensus 366 -------------------------------------------------~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 395 (487)
. ......+..++.+++.+++|+++||+|||
T Consensus 546 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr 625 (742)
T TIGR01299 546 FKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL 625 (742)
T ss_pred hhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 0 00112344477789999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCC
Q 011369 396 ISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
++++++.++.++++++.....+...++++.++.+++.++.++....++.+.+|++.|++++|+. .....+|+++
T Consensus 626 -----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~-~~~~rlGaii 699 (742)
T TIGR01299 626 -----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFL-NALCKAAAVL 699 (742)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH-HHHHHHHHHH
Confidence 7777777777777776666655555666666777777777788888899999999999999997 6777789999
Q ss_pred ccceeeeeec
Q 011369 476 SSPLVGVLQV 485 (487)
Q Consensus 476 ~p~~~g~l~~ 485 (487)
||+++|.+.+
T Consensus 700 gp~i~g~L~~ 709 (742)
T TIGR01299 700 GILIFGSFVG 709 (742)
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.1e-37 Score=297.92 Aligned_cols=377 Identities=15% Similarity=0.167 Sum_probs=263.7
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
++++..+++.++..++++..++.. +|.+.+++|+|..+.+++.+.+.+++.+++++.|+++||
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 84 (434)
T PRK11663 22 RHILITMYLGYALFYFTRKSFNAA-----------------MPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDR 84 (434)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHh-----------------hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhh
Confidence 346666777778877777766543 488999999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
+|||+++.++.++.+++.+++++++|++.+++.|++.|++.|...+....++.|++|+++|++++++++.+.++|..+++
T Consensus 85 ~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 164 (434)
T PRK11663 85 SNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIP 164 (434)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhh
Q 011369 224 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 303 (487)
Q Consensus 224 ~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (487)
++++.+.+.+|||+.|++.+++.++..++..+..||++++...++..+...+.. +.. ++.
T Consensus 165 ~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------------~~~--------~~~ 224 (434)
T PRK11663 165 LVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDAL------------ELA--------QQQ 224 (434)
T ss_pred HHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccccccc------------ccc--------hhc
Confidence 999999999999999999988877666555555565433211111000000000 000 000
Q ss_pred hccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhh
Q 011369 304 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 382 (487)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (487)
+.. . .+.++..+ +..++++.++...+..++.......+..|+|.|+.+..|.+.... ....+..+++.+++
T Consensus 225 ~~~---~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~ 296 (434)
T PRK11663 225 EGA---G---LSRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA 296 (434)
T ss_pred ccc---C---CChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00011111 125678888888777777776677777899999977778876555 45566778899999
Q ss_pred hhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHH
Q 011369 383 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMA 462 (487)
Q Consensus 383 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g 462 (487)
++.|++.||+.++++.................+......+........+..+++.............+..|++.|+++.|
T Consensus 297 ~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 376 (434)
T PRK11663 297 LVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATG 376 (434)
T ss_pred HHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHH
Confidence 99999999994332111111211111111111111112222222222222232221111112233456677899999999
Q ss_pred HHHHHHHhhcCCCccceeeeeecc
Q 011369 463 ISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 463 ~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+. .....+|.+++|.+.|++.|+
T Consensus 377 ~~-~~~~~~g~~~~p~~~g~l~~~ 399 (434)
T PRK11663 377 FV-GLFAYLGAALSGYPLAKVLEI 399 (434)
T ss_pred HH-HHHHHHHHHHhcccHHHHHHh
Confidence 97 566777889999999998875
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.6e-37 Score=302.06 Aligned_cols=397 Identities=13% Similarity=0.062 Sum_probs=288.2
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
+|.++..+++..++..+|.++++.. +|.+.+|+|.+.++.+|+.+.|.++..++.+++|+++|
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a-----------------~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D 66 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVA-----------------APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGD 66 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3557788899999999999998864 59999999999999999999999999999999999999
Q ss_pred hcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcC-CCCchhHHHHHHHhhhhhhhhh
Q 011369 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
|+|||++++++.+++.++++++++++|++.++++|+++|+|.+...+.....+.+.+ |+++|+++++++.....+|..+
T Consensus 67 ~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 67 RIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998888887776 6789999999999999999999
Q ss_pred HHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhccc-------ccCcccCCCccccccc
Q 011369 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV-------SEGSEASNLNDHVSED 294 (487)
Q Consensus 222 g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 294 (487)
||.+++.+.++++|||.|++...+.++..++.++..|+.+.+.. ++.+....... ................
T Consensus 147 gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~--~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 224 (495)
T PRK14995 147 GPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRD--QPLNLGHALMLIVAILLLVYSAKTALKGFLSLWV 224 (495)
T ss_pred HHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CCCChHhHHHHHHHHHHHHHHHHhccccCCchHH
Confidence 99999999999999999999988887777777777676432110 00000000000 0000000000000000
Q ss_pred chhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeece
Q 011369 295 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGV 373 (487)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~ 373 (487)
....................+.++...+ .+++++|.+....+..+...........+.|.|+++..|.++.+. .....
T Consensus 225 ~~~~~~~~~~~l~~f~~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~ 303 (495)
T PRK14995 225 TSLTLLTGALLLGLFIRTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLP 303 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 0000000000000000000001111122 357888888887777777777777777889999999899987776 45555
Q ss_pred eecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhccCCCeeEEEEe
Q 011369 374 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLH 450 (487)
Q Consensus 374 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (487)
..++..++.++.|++.||+++| +.+..+..+..+........ .+.+......++.+++.+...++......+
T Consensus 304 ~~~~~~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~ 378 (495)
T PRK14995 304 VMVASGFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMA 378 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 6678888999999999999987 56555555554444333222 233445556777788888877777778888
Q ss_pred ecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 451 SVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 451 ~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
.+|+++++.+.++. .....+|..+|+.+.|.+.+
T Consensus 379 ~~~~~~~g~~~~~~-~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 379 AAPPEKAAAAGAIE-TMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred cCCHHhcchHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 89999999999996 66677788889988888765
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.5e-37 Score=292.01 Aligned_cols=330 Identities=12% Similarity=0.017 Sum_probs=241.9
Q ss_pred ccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 011369 102 CTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (487)
Q Consensus 102 ~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (487)
.|.+|.+++|+|+|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+....++|+++++++|+++|
T Consensus 11 ~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G 90 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAA 90 (368)
T ss_pred HhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999998766555544444333333479999999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
++.+. .+.....++|++|+++|++++++.+.+..+|.++++++++.+.+++|||+.|++.++++++..++.++..||++
T Consensus 91 ~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 91 LGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred hHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99996 55666677999999999999999999999999999999999999999999999999998888777777778754
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (487)
++.. +.. .. + +..+++++++++|.+|...+..++
T Consensus 170 ~~~~--~~~-~~----------------------------------------~---~~~~~~~~ll~~~~~~~~~~~~~~ 203 (368)
T TIGR00903 170 FQAA--EGF-GF----------------------------------------K---DAVKEFGALAGRKDLWIIGAILGF 203 (368)
T ss_pred CCCC--CCc-ch----------------------------------------H---HHHHHHHHHHcChhHHHHHHHHHH
Confidence 3211 000 00 0 001235678899999999999999
Q ss_pred HHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 011369 342 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (487)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (487)
.....+.+.+|+|.|+++ .+++........ +....+.+..++++||..|+..++ ........+.++.........
T Consensus 204 ~~~~~~~~~~wlp~~L~~-~g~s~~~~~~~~---l~~~~g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~~ 278 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRP-AGLEDIAGDAVA---LAILAGLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFEL 278 (368)
T ss_pred HHHHHHHHHHHHHHHHHH-CCCChHHHHHHH---HHHHHHHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999976 456643222222 333445555689999987653221 222222233333333333233
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
+....+.+.++.+++....++..+.+..|.+|++.|+++.|+. .....+|++.+|.+.|.+.
T Consensus 279 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~-~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 279 NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAI-GFTSRAISVALALAAMLFI 340 (368)
T ss_pred ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchh-hHHHHHHHHHHHHHHHHHh
Confidence 3333444555566666666666677888999999999999997 5555557777887776543
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.6e-36 Score=290.50 Aligned_cols=324 Identities=17% Similarity=0.133 Sum_probs=248.9
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|.+.+|+|.|+.+.+++.+.+.+++.++++++|+++||+|||+++..+.++.+++++++++++|+++++++|+++|++.
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 111 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAH 111 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+...+++.|++|+++|+++++++..+.++|..++|++++.+.+++|||+.|++.+++.++..+..++..|+.++
T Consensus 112 ~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~-- 189 (390)
T PRK03545 112 AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS-- 189 (390)
T ss_pred HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999998887776665555554211
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
++++. .++.++.+++|.++......++...
T Consensus 190 ---~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (390)
T PRK03545 190 ---EHSGS-----------------------------------------------LKSLPLLFRRPALVSLYLLTVVVVT 219 (390)
T ss_pred ---CCcch-----------------------------------------------HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 00000 0123456778877765555554444
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 423 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (487)
.......+.+.++++..|.+.... .+.....++.+++.++.+++.||+++| ..............++....++.
T Consensus 220 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~~ 294 (390)
T PRK03545 220 AHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANSE 294 (390)
T ss_pred HHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhchH
Confidence 444445667777777777776555 444556678899999999999999876 44333333333332333334455
Q ss_pred HHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 424 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
+..++..++.+++.....+.......+.. ++.|+++.|+. .....+|..+||.+.|++.|++
T Consensus 295 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~-~~~~~~g~~~G~~~~G~~~~~~ 356 (390)
T PRK03545 295 WHLSVLSIFWGIAIMCIGLAMQVKVLKLA-PDATDVAMALF-SGIFNIGIGAGALLGNQVSLHL 356 (390)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHhC-CCcHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcc
Confidence 55555666666665544444444444544 57889999987 5566778888999999988753
No 11
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.3e-35 Score=286.23 Aligned_cols=358 Identities=18% Similarity=0.188 Sum_probs=267.8
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
++|.++.++++..+.+++|...++.. .|.+.+|+|.++.+.+++.+.+.++..+++++.|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 74 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVA-----------------APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLA 74 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456777778888888888887753 4889999999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
||+|||+++..+.++..++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 75 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 154 (406)
T PRK11551 75 DRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGAL 154 (406)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhh
Q 011369 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (487)
Q Consensus 222 g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (487)
++.+++.+.+..+||+.|++.+++.++..++..+..||++++..++++++. .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------~~-------- 207 (406)
T PRK11551 155 ASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ-------------------RA-------- 207 (406)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh-------------------hh--------
Confidence 999999998889999999998887766666666666664322110000000 00
Q ss_pred hhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccch
Q 011369 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 380 (487)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 380 (487)
+.. +...+..+.+..+...+..+......+....|.|.++++ .|.+.... .......++.++
T Consensus 208 ------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~ 270 (406)
T PRK11551 208 ------------PVL----RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGAL 270 (406)
T ss_pred ------------hhH----HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHH
Confidence 000 000000011222223333333334444556678888877 56665554 444566688899
Q ss_pred hhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHH
Q 011369 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (487)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (487)
+.++.|++.||+++| +.+........+..+.....++.+...+..++.+++.....+....+..+.+|++.|+++
T Consensus 271 ~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 345 (406)
T PRK11551 271 GSLLIGALMDRLRPR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTG 345 (406)
T ss_pred HHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhh
Confidence 999999999999987 555544444444444333344444455555566666666666677788889999999999
Q ss_pred HHHHHHHHHhhcCCCccceeeeeecc
Q 011369 461 MAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 461 ~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.|+. .....+|..+||.+.|++.|+
T Consensus 346 ~g~~-~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 346 VGAA-VAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred hhHH-HHhhhHHHHHHhhhHhhhhcc
Confidence 9997 566777888999999998774
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.7e-35 Score=285.03 Aligned_cols=353 Identities=20% Similarity=0.202 Sum_probs=260.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
.|.+.+++|.++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++|++.++++|+++|++.
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 96 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAE 96 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..++.++..||++++.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (399)
T TIGR00893 97 APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKA 176 (399)
T ss_pred HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCcc
Confidence 99999999999999999999999999999999999999999999999899999999999888777777666666543221
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
...+++++. ... +.... + . +.+ +...+.....++.+++|.++...+..++...
T Consensus 177 ~~~~~~~~~--~~~----~~~~~--~----~-------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 177 KWLTEEEKY--IVV----GGLLA--E----Q-------QGK--------GPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred ccCCHHHHh--hcc----hhhcc--c----c-------ccc--------cccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 110000000 000 00000 0 0 000 0000111235567788999888888888888
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH---H
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---L 420 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 420 (487)
....+..+.|.|+++..+.+.... .+.....++.+++.++.+++.||+++|+..................+.... .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (399)
T TIGR00893 230 GLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYV 309 (399)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccc
Confidence 888888899999988888776555 445566788889999999999999998421100001111111111111111 1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.+..+....+..++ ....+....+..+..|++.|+++.|+. .....+|..++|.+.|++.|.
T Consensus 310 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 310 NIPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLI-NSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred hhHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHH-HHHHHHhhhhhhHHhhhhccC
Confidence 2233333333333333 335677788888999999999999997 566677889999999999875
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=7.2e-35 Score=278.21 Aligned_cols=322 Identities=14% Similarity=0.080 Sum_probs=243.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|++.+|+|.++.+.++..+++.++..+++++.|+++||+|||++++.+.++.+++.+++++++|++.+++.|+++|++.
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+....++.|++|+|+|++++++...+.++|..++|++++.+.+.+|||+.|++.+++.++..+......||.++
T Consensus 123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~-- 200 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG-- 200 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc--
Confidence 999999999999999999999999999999999999999999999999999999999987766655444433454210
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
++++. .+..++.+++|.++...+..++...
T Consensus 201 ---~~~~~-----------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 201 ---EPSHQ-----------------------------------------------KQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred ---ccccc-----------------------------------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 00000 0113356778888776665555554
Q ss_pred hheeeeecc-cceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011369 345 VIGAYSYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (487)
Q Consensus 345 ~~~~~~~~~-p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (487)
.......+. |.+.+ ..|.+.... .......++.+++.++.+++.||.+++ .............+++....++
T Consensus 231 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~ 304 (394)
T PRK10213 231 GQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSD 304 (394)
T ss_pred HHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhh
Confidence 444445555 55554 467776554 434455677788888888888884332 2233333323333333334445
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.+......++.+++.+...+.....+.+..| +.++.+.++. .....+|..+||.+.|++.|+
T Consensus 305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 305 KIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQ-VAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 5556666777777777777666666777775 4566777765 556677888999999999875
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.1e-35 Score=284.81 Aligned_cols=346 Identities=15% Similarity=0.097 Sum_probs=234.8
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccc---cCccccchhhhHH---HHHHHHHHHHHHH
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFK---LNNFQDGVLSSAF---MVGLLVASPIFAS 139 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~---~s~~~~~~~~s~~---~~~~~i~~~~~g~ 139 (487)
.+...+++.+++++|...++.. .|.+.+|++ .+..+.++..+++ +++..++++++|+
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~ 85 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFC-----------------SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGR 85 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888999999998864 377888885 4455444444444 4455599999999
Q ss_pred hhhhcCCCeEehhHHHHHHHHHHHhhcchhHH--------HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHH
Q 011369 140 LAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 211 (487)
Q Consensus 140 l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 211 (487)
++||+|||+++.+++++++++++++++++|+. .++++|+++|++.|..++...++++|++|+++|+++.++.
T Consensus 86 l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~ 165 (432)
T PRK10406 86 IADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQ 165 (432)
T ss_pred HHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHH
Confidence 99999999999999999999999999999874 5899999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhHHHHHHhhc--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcc
Q 011369 212 YMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 283 (487)
Q Consensus 212 ~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (487)
+.+...|.++++.+...+. ..+|||++|++.+++.++... .....||+++. ++ +..
T Consensus 166 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~-~~~---------- 229 (432)
T PRK10406 166 YVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----ET-RAL---------- 229 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----HH-hhh----------
Confidence 9888888888887655443 257999999998777655432 22222332110 00 000
Q ss_pred cCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH-HHhhheeeeecccceeeeccc
Q 011369 284 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYH 362 (487)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~ 362 (487)
++ ..++++++++++.+...+...+ ....++.+..|+|.|+++..+
T Consensus 230 ------------------------------~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g 275 (432)
T PRK10406 230 ------------------------------KE----AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAG 275 (432)
T ss_pred ------------------------------cc----cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00 0124455667777665554443 355566778899999987777
Q ss_pred ccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH-HHH-HH--HHHHHHHHHHHHHHHHH
Q 011369 363 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-CL--SSLYGFLALFTVGELLV 437 (487)
Q Consensus 363 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~ 437 (487)
.+..+. ....+..+...++.++.|+++||++|| +.+.+...+..+... ... .. .+....+.+..+..+..
T Consensus 276 ~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (432)
T PRK10406 276 MHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIV 350 (432)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 775444 334455566677888889999999998 444444333222221 111 11 12222222222222222
Q ss_pred hccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 438 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
+...+....+..|.+|++.|+++.|+.+...+.+.+...|.+.+++
T Consensus 351 ~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 351 SFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred HHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 2223334556778899999999999986665654334577766644
No 15
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=6.5e-35 Score=281.73 Aligned_cols=376 Identities=13% Similarity=0.077 Sum_probs=264.6
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
.+++.+..+++.++..+++...++.. .|.+++++|+++.+.+++.+++.++..+++++.|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~ 71 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALV-----------------LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWG 71 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888889999999999888764 4889999999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
||+|||++++++.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+
T Consensus 72 Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~ 151 (405)
T TIGR00891 72 DRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVV 151 (405)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccc--hHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhh
Q 011369 222 GYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA 299 (487)
Q Consensus 222 g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (487)
++.+++.+.+..+ ||+.|++.+++.++.. +.....||+++...++++.+.. .+...+..
T Consensus 152 ~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~ 212 (405)
T TIGR00891 152 AAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------------RTMVDILY 212 (405)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------------hhHHHHHh
Confidence 9999999887766 9999998765544433 3333345532211000000000 00000000
Q ss_pred hhhhhccccccchhhhhhhhhHHHHhhh-c-chhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeec
Q 011369 300 SERSIKSIGESRFLNQLSQFSQDTKVLL-Q-EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV 376 (487)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~ 376 (487)
..... .+ ...++.....++.. + .+.+...................+.|.|+.+..+.+..+. .+.....+
T Consensus 213 ~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 285 (405)
T TIGR00891 213 GGEHR----IA---NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNI 285 (405)
T ss_pred ccchh----hh---hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 00000 00 00000001111111 1 1112223333333344444566778888887778776555 45556678
Q ss_pred ccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCC
Q 011369 377 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (487)
Q Consensus 377 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (487)
+.+++.++.+++.||+++| +.+..+..+.....+.... ..+.+...+..++.+++.....+.....+.+..|++
T Consensus 286 ~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (405)
T TIGR00891 286 GAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTD 360 (405)
T ss_pred HHHHHHHHHHHHHHHhCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcc
Confidence 8899999999999999998 5555554444332222222 233333444445555555566666777888899999
Q ss_pred chhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.|+++.|+. .....+|..++|.+.|++.|+
T Consensus 361 ~~~~~~g~~-~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 361 QRAAGLGFT-YQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred hhHHHhhHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 999999997 556667888999999999885
No 16
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.3e-35 Score=282.22 Aligned_cols=366 Identities=15% Similarity=0.148 Sum_probs=264.6
Q ss_pred HHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehh
Q 011369 73 INMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV 152 (487)
Q Consensus 73 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~ 152 (487)
.++..++++..++.. +|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++++
T Consensus 3 ~~~~~~~~~~~~~~~-----------------~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 65 (379)
T TIGR00881 3 GYAAYYLVRKNFALA-----------------MPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPI 65 (379)
T ss_pred hhhHHHHhHHhhhhh-----------------hHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHH
Confidence 345566666666643 488999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH-HHHHhhcc
Q 011369 153 GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGS 231 (487)
Q Consensus 153 ~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~~~~~l~~ 231 (487)
+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .+++.+.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 66 GLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 57777777
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccc
Q 011369 232 HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR 311 (487)
Q Consensus 232 ~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (487)
..+||+.|++.+++.++..++.++..||.++....++.++... ++..+..++ .+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~-----~~------- 199 (379)
T TIGR00881 146 LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPN--------------EEPDGDAEK-----KE------- 199 (379)
T ss_pred cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcc--------------ccccccccc-----cc-------
Confidence 8899999999998887777776666666433211111000000 000000000 00
Q ss_pred hhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHh
Q 011369 312 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD 390 (487)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d 390 (487)
+.........++++++|.++...+..+........+..+.|.|+++..+.+..+. .......++.+++.++.+++.|
T Consensus 200 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 277 (379)
T TIGR00881 200 --EELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSD 277 (379)
T ss_pred --ccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHH
Confidence 0000111234566788888888888777777777788889999988778876555 4555667888999999999999
Q ss_pred hhcccchhhhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHH
Q 011369 391 QMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 468 (487)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~ 468 (487)
|..++++. ................... ..+.+......++.+.+.....+.......+..|++.|+++.|+. ...
T Consensus 278 r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~ 354 (379)
T TIGR00881 278 KLFNGRRG--PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFV-GFF 354 (379)
T ss_pred HHcCCcch--HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHH-HHh
Confidence 87544321 1111111111112111111 223333334444444444444444455677888899999999997 666
Q ss_pred HhhcCCCccceeeeeecc
Q 011369 469 HIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 469 ~~~g~~~~p~~~g~l~~~ 486 (487)
..+|..++|.+.|.+.|+
T Consensus 355 ~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 355 AYLGGILAGLPLGYLADG 372 (379)
T ss_pred hhhhhhhhhhhHHHHHHh
Confidence 777888999999998875
No 17
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.5e-34 Score=281.81 Aligned_cols=392 Identities=14% Similarity=0.120 Sum_probs=272.4
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCC-C----CcccCCCccccccccCccccchhhhHHHHHHHHHHHH
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDD-K----GICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPI 136 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~----~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~ 136 (487)
.++.+..++++++..++.|+.+++............. + .-.|.......|++++..+.|++.+.+.+++.+++++
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~ 95 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIP 95 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcc
Confidence 3455777778888899999999987653221100000 0 0001111222388999999999999999999999999
Q ss_pred HHHhhhhcCCCeEehhHHHHHHHHHHHhhcc--hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhh
Q 011369 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 214 (487)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 214 (487)
.|+++||+|||+++.++.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+
T Consensus 96 ~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 96 VGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred hHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999998887554 56889999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccc
Q 011369 215 IPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSE 293 (487)
Q Consensus 215 ~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (487)
..+|..+++++++.+.+.+ +||++|++.++++++..++.+++.+++++...+.+ +++. +
T Consensus 176 ~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~--~----------------- 235 (465)
T TIGR00894 176 FQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCIS-KFEK--K----------------- 235 (465)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCC-HHHH--H-----------------
Confidence 9999999999999999884 99999999999888777766666655432211100 0000 0
Q ss_pred cchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeec
Q 011369 294 DISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (487)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (487)
..++...+++. . . +...+++++++++.+|...+..+......+.+.+|+|.|+++..+.+.... ...+
T Consensus 236 ~i~~~~~~~~~-~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~ 304 (465)
T TIGR00894 236 YINSSLQGQKG-S-------T---RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSS 304 (465)
T ss_pred HHHhhcccccC-C-------C---CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHH
Confidence 00000000000 0 0 001235678899999999999888888888889999999998888886665 5556
Q ss_pred eeecccchhhhhhhhhHhhhcccchhhhH----HHHHHHHHH-HHHHHHHHH-HHHHHHHHHHHHHHHHHHhccCCCeeE
Q 011369 373 VTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLG-AISCLTAFC-LSSLYGFLALFTVGELLVFATQAPVNY 446 (487)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (487)
+..++..++.+++|+++||+++|+...+. .......+. .+..+.... ..+....++++++.+.+.+...+....
T Consensus 305 ~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 384 (465)
T TIGR00894 305 LPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLI 384 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhh
Confidence 67788899999999999998765332211 111111111 111111111 122333344444544444444443333
Q ss_pred EEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 447 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 447 ~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
...+. .++.+|.+.|+. ...+.+|.+++|.+.|++.|.
T Consensus 385 ~~~~~-~~~~~g~~~g~~-~~~~~l~~~i~p~l~g~~~~~ 422 (465)
T TIGR00894 385 NSLDL-APRFLGFIKGIT-GLPGFIGGLIASTLAGNILSQ 422 (465)
T ss_pred chhhc-ChhHHHHHHHHH-HHHHHHHHHHHHHhhheeeCC
Confidence 33344 456899999997 556667888999999988763
No 18
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-34 Score=277.28 Aligned_cols=329 Identities=12% Similarity=0.010 Sum_probs=248.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|.+.+|+|+++.+.+++.+++.+++.++++++|+++||+|||+++.++.++.+++.+++++++|++.++++|++.|++.
T Consensus 26 ~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 105 (377)
T TIGR00890 26 APPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGV 105 (377)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+.....+.|++| |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+..++..++++++.
T Consensus 106 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (377)
T TIGR00890 106 GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL 184 (377)
T ss_pred HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc
Confidence 9988888889999997 589999999999999999887777777777789999999999988887777666654422110
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
.+++ ++. + + .....++.++++.++...+..+....
T Consensus 185 ~~~~--~~~----------------------~-----------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (377)
T TIGR00890 185 IKTN--IEV----------------------S-----------------V----KDYTVWEMLRTPQFWVLYLSFFLNAV 219 (377)
T ss_pred cccC--ccc----------------------c-----------------h----hhhhHHHHHcCccHHHHHHHHHHHhH
Confidence 0000 000 0 0 00123455677777776666555544
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH-
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS- 422 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 422 (487)
.......+.+.|.++ .+.+.... .+..+..++.++++++.|++.||++|| +.+..+..+..+..+.....++
T Consensus 220 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 293 (377)
T TIGR00890 220 SGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFIPML 293 (377)
T ss_pred HHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHcccc
Confidence 444444455656554 45554443 445667788899999999999999988 5666655555555544433332
Q ss_pred -HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 423 -LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 423 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
....+...++.+++.+...+....+..+.+|+++|+++.|+. .....+|..++|.+.|.+.|+
T Consensus 294 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 294 NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFL-YTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 222333345556666666555666777888899999999997 566777889999999988764
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.5e-34 Score=275.22 Aligned_cols=334 Identities=16% Similarity=0.098 Sum_probs=260.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch-----hHHHHHHHHHHh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-----~~~~l~~~r~l~ 180 (487)
|.+..|++.++.+.+++.+++.++..++++++|+++||+|||++++.+.++..++.++.++++ |++.+++.|+++
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 667888999999999999999999999999999999999999999999999999988888887 999999999999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
|++.+...+...+++.|++|+++|++++++.+.+..+|.++++++++.+.+..+||+.|++.++..++..+..++..+++
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPE 182 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998877665554444332221
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
.++ +++ ++.. + +..++..+.++.++++|.++...+..+
T Consensus 183 ~~~---~~~-~~~~------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T TIGR00900 183 LAA---SEI-QALS------------------N--------------------AVLRDTREGIKFVLKNPLLRTLLLLAL 220 (365)
T ss_pred CCC---ccc-cccc------------------h--------------------hHHHHHHhHHHHHHcCcHHHHHHHHHH
Confidence 100 000 0000 0 000111234556678888887777766
Q ss_pred HHHhhheeee-ecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (487)
Q Consensus 341 ~~~~~~~~~~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (487)
.......... .+.|.+.++..+.+..+. .+.....++.+++.++.+++.||.+++ +.+..+..+..+......
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 221 LFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHH
Confidence 6666555454 678888887677776555 445566778889999999999999887 555555554544444444
Q ss_pred HHH-HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 419 CLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 419 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
... +.+...+..++.+++.+...+....+..+.+|++.|+++.|+. .....++..++|.+.|++.|++
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 296 LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ-FSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHc
Confidence 444 3566667777888888877787888889999999999999997 5566678889999999998863
No 20
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=7.5e-35 Score=286.25 Aligned_cols=361 Identities=11% Similarity=0.041 Sum_probs=240.7
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccc-cchh-----hhHHHHHHHHHHHHH
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQ-DGVL-----SSAFMVGLLVASPIF 137 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~-~~~~-----~s~~~~~~~i~~~~~ 137 (487)
++++...+++.+++++|...++.. .|.+.++|+.+.++ .+++ .++.++++.++++++
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~ 77 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFV-----------------AYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFF 77 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777788999999999998764 37788888654433 2332 477789999999999
Q ss_pred HHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHH--------HHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHH
Q 011369 138 ASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 209 (487)
Q Consensus 138 g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~--------l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~ 209 (487)
|+++||+|||+++.+++++++++++++++++|+++ ++++|+++|++.|..++....++.|++|+++||++.+
T Consensus 78 G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~ 157 (490)
T PRK10642 78 GMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGS 157 (490)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999999999875 8999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhHHHHHHhhc--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccC
Q 011369 210 MFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 281 (487)
Q Consensus 210 ~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 281 (487)
+...+..+|..+|+.+...+. ..+|||++|++.+++.++ .++.....||+++.....++.++ ..
T Consensus 158 ~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~----~~--- 229 (490)
T PRK10642 158 WLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQ----GD--- 229 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhh----hc---
Confidence 999888888888886654432 357999999998765554 33334445664332110000000 00
Q ss_pred cccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhc-c-hhHHHHHHHHHHHHhhheeeeecccceeee
Q 011369 282 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ-E-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 359 (487)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 359 (487)
. +... +.+ + .+++++++ + +.+.......+.....++.+..|+|.|+++
T Consensus 230 -----~-----~~~~------~~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 279 (490)
T PRK10642 230 -----R-----EGLQ------DGP--------K------VSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH 279 (490)
T ss_pred -----c-----cccc------ccc--------c------CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 000 0 01122222 1 222222223344455666777899999987
Q ss_pred cccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHH
Q 011369 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AF--CLSSLYGFLALFTVGEL 435 (487)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~ 435 (487)
..+.+.... .......++.+++.++.|+++||+||| +.+..+.+...+..+. .. ...+....++..++.++
T Consensus 280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 354 (490)
T PRK10642 280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAV 354 (490)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 777765444 333445577788889999999999998 5555444332222211 11 11223333333444444
Q ss_pred HHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 436 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
+.+...+....+..+.+|++.|+++.|+.+..... ++.++|.+.|++.+
T Consensus 355 ~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~ 403 (490)
T PRK10642 355 ILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVL-VAGLTPTLAAWLVE 403 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 44444444455556788999999999986455444 45678888887654
No 21
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=5.8e-35 Score=288.64 Aligned_cols=395 Identities=14% Similarity=0.138 Sum_probs=283.9
Q ss_pred hhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc
Q 011369 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (487)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~ 144 (487)
+++..++++.++..+|....+.. +|.+.+++|.+..+.+|+.+.+.++..++.++.|+++||+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 64 (485)
T TIGR00711 2 LLTIVLMLGTFMAVLDSTIVNVA-----------------IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF 64 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 35667777888888888877653 4999999999999999999999999999999999999999
Q ss_pred CCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHH
Q 011369 145 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYV 224 (487)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 224 (487)
|||++++++.++..++.+++++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.
T Consensus 65 g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 144 (485)
T TIGR00711 65 GTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPT 144 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhc-------ccccCcccCCCcccccccchh
Q 011369 225 YGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSEGSEASNLNDHVSEDISD 297 (487)
Q Consensus 225 ~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 297 (487)
+++.+.++++||+.|++.+++.++..++.++..|++.+... ++.+..... .........+..++.......
T Consensus 145 ~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (485)
T TIGR00711 145 LGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--ENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEIL 222 (485)
T ss_pred cHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 99999999999999999998887777766666665322111 100000000 000000000000000000000
Q ss_pred hh-hhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceee
Q 011369 298 QA-SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI 375 (487)
Q Consensus 298 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 375 (487)
.. ...............+.++... ..+++++|.++...+..+......+....++|.|+++..+.++.+. .......
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~ 301 (485)
T TIGR00711 223 ILSITGLVAIIAFVVWELTDDNPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVG 301 (485)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 00 0000000000000000000111 1246788888888777777777777778889999998888887666 4445566
Q ss_pred cccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHhccCCCeeEEEEee
Q 011369 376 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHS 451 (487)
Q Consensus 376 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (487)
++.+++.++.|++.||+++| +.+..+..+..+...+.. .. .+.+......++.+++.+..+++......+.
T Consensus 302 ~~~~~~~~~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~ 376 (485)
T TIGR00711 302 LAPMLSSPIAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSG 376 (485)
T ss_pred HHHHHHHHHHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88889999999999999998 666666655555554443 11 1234445556667777776666666666788
Q ss_pred cCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 452 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 452 ~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
+|+++++++.|+. .....+|..+|+.+.|.+.+
T Consensus 377 ~~~~~~g~~~~~~-~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 377 LPPHKIARGSSLS-NFTRQLGGSIGTALITTILT 409 (485)
T ss_pred CCHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 8889999999997 55667788899998887765
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=279.17 Aligned_cols=361 Identities=15% Similarity=0.115 Sum_probs=251.6
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
++.+..+.+.++..+++....... +|.+++|+|+++.+.+++.+++.+++.++++++|+++||
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr 79 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYI-----------------MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADK 79 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-----------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677778888888888877643 488999999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
+|||++++++.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++
T Consensus 80 ~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 159 (426)
T PRK12307 80 FGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA 159 (426)
T ss_pred hCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhh
Q 011369 224 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 303 (487)
Q Consensus 224 ~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (487)
.+.+.+.+..+||+.|++..+..++ .+......||+.+.. + ++. +. .. +
T Consensus 160 ~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~~----~-~~~--~~-------~~---~------------- 208 (426)
T PRK12307 160 YFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEWE----E-AKL--SG-------KG---K------------- 208 (426)
T ss_pred HHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHHH----H-hhh--hc-------cc---c-------------
Confidence 9999999989999999986443222 211111123211100 0 000 00 00 0
Q ss_pred hccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH---HHHhhheeeeecccceeeecccccccce-eeeceeecccc
Q 011369 304 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI---AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI 379 (487)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~ 379 (487)
... ....+.....+++++++.++....... ......+.+..++|.|+++ .+.+.... ....+..++.+
T Consensus 209 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 280 (426)
T PRK12307 209 HSQ-------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTV 280 (426)
T ss_pred ccc-------cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHH
Confidence 000 000001123455667766654333222 2222223345678888876 46665444 44455667889
Q ss_pred hhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCCCeeEEEEeecCCCch
Q 011369 380 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSLR 457 (487)
Q Consensus 380 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~r 457 (487)
++.++.+++.||++|| +....+.++..+..+...............++.+.+. .+..+.....+.+.+|++.|
T Consensus 281 ~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 355 (426)
T PRK12307 281 LGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR 355 (426)
T ss_pred HHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH
Confidence 9999999999999988 5555555554444433332222111112222222221 12223344566788988999
Q ss_pred hHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 458 ALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 458 ~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+++.|+. .....+|+.++|.+.|++.|+
T Consensus 356 g~~~g~~-~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 356 GLGTGLI-YNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred hhhhhHH-HHHHhHHHHHHHHHHHHHHHc
Confidence 9999997 556666888999999988775
No 23
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=278.09 Aligned_cols=357 Identities=11% Similarity=0.067 Sum_probs=243.6
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCC-cccccc--ccCccccchhh-----hHHHHHHHHH
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGS-GIQGDF--KLNNFQDGVLS-----SAFMVGLLVA 133 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~-~i~~~~--~~s~~~~~~~~-----s~~~~~~~i~ 133 (487)
++++.+...++..+.+++|...++... | .+.+++ +.++. .+++. ++.+++..++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~-----------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 80 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITA-----------------ALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLG 80 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhH
Confidence 345677778889999999999887541 3 244555 56655 45554 3455667899
Q ss_pred HHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHH--------HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchh
Q 011369 134 SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 205 (487)
Q Consensus 134 ~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~ 205 (487)
+++.|+++||+|||++++++.++++++++++++++|++ .++++|+++|++.|..++....++.|++|+++|+
T Consensus 81 ~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg 160 (438)
T PRK09952 81 GVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKA 160 (438)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999999999999999987 5889999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHhhc--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcc
Q 011369 206 AWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 277 (487)
Q Consensus 206 ~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 277 (487)
+..+..+.+..+|.+++..+...+. ..+|||++|++.+++.++. +......||+++....+++.++
T Consensus 161 ~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~~----- 234 (438)
T PRK09952 161 FYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQAA----- 234 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhccc-----
Confidence 9999999999999999887766554 3579999999887765432 2222223442211000000000
Q ss_pred cccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHH-HHHHHHhhheeeeecccce
Q 011369 278 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKA 356 (487)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~ 356 (487)
.+ ++ . ...+.++++++.+.... ..+......+....|.|.|
T Consensus 235 -------------~~---------------------~~-~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 276 (438)
T PRK09952 235 -------------AK---------------------KR-I---PVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNY 276 (438)
T ss_pred -------------cc---------------------cc-C---CHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0 00112334555544433 3444455566667788888
Q ss_pred eeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH---HH-HHHHHHHHHH
Q 011369 357 GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS-SLYGFLALFT 431 (487)
Q Consensus 357 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~ 431 (487)
+++..+.+.... ....+..+..+++.++.|+++||++|| +.+..+.++..+..+.... .. ..+..+...+
T Consensus 277 ~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T PRK09952 277 STQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIM 351 (438)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 887777765432 223344566677888999999999998 5555444443333222211 11 2223333444
Q ss_pred HHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 432 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
+.+++.+...+....+..|.+|++.|+++.|+.+.....+|+.++|.+.|++.|
T Consensus 352 l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~ 405 (438)
T PRK09952 352 LANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVT 405 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455665655666677788889999999999997555566788899999998866
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.7e-34 Score=279.80 Aligned_cols=375 Identities=13% Similarity=0.051 Sum_probs=250.5
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
|.++..+++.....+.++..++.. +|.+.++ |++..+.+++.+.+.+++.++++++|+++||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr 89 (452)
T PRK11273 28 WQIFLGIFFGYAAYYLVRKNFALA-----------------MPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDR 89 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----------------hHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Confidence 445555666667777776665542 3788888 9999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcch----hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhh
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV 219 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~----~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 219 (487)
+|||++++++.++.+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+..+|.
T Consensus 90 ~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 90 SNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred cCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999888763 788999999999999998888888899999999999999999999999886
Q ss_pred h-hHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhh
Q 011369 220 A-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (487)
Q Consensus 220 ~-~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (487)
. .+++++..+....+||+.|++.+++.++..++.+++.||.+++...+++++.. .+. + + ..+
T Consensus 170 ~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~----~------~---~~~-- 232 (452)
T PRK11273 170 GLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--NDY----P------D---DYN-- 232 (452)
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh--hcc----c------c---ccc--
Confidence 4 45555433433458999999999888777777766666644321111100000 000 0 0 000
Q ss_pred hhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecc
Q 011369 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVC 377 (487)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~ 377 (487)
..+.+. ...++.. .+.+++++.+|...+..++.....+....|+|.|+++..+++.... ....+..++
T Consensus 233 --~~~~~~-------~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~ 301 (452)
T PRK11273 233 --EKHEQE-------LTAKQIF--MQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA 301 (452)
T ss_pred --cccCCC-------ccHHHHH--HHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 000000 0001110 1246788999988888777777777788899999998777775444 344456677
Q ss_pred cchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCC
Q 011369 378 GIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (487)
Q Consensus 378 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (487)
.+++.++.|+++||++++++. ........+..+..+..... .+.+..++..++.+.+.............+..|++
T Consensus 302 ~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 379 (452)
T PRK11273 302 GIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK 379 (452)
T ss_pred HHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence 888999999999999543221 11111112222222211111 12222233333333332222222223445788889
Q ss_pred chhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.||++.|+.+...+..+.+.+|.+.|++.|+
T Consensus 380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~ 410 (452)
T PRK11273 380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 410 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999975544554455689999988775
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=4.2e-34 Score=273.24 Aligned_cols=322 Identities=12% Similarity=0.003 Sum_probs=242.0
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+|.+++|+|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.++++|+++|+
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gi 109 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGV 109 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHh
Confidence 34699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
+.+...+....++.+++| ++|+++++++..+..+|..+++.+++.+.++. +||+.+.+.++..++..+..++..++.+
T Consensus 110 g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (393)
T PRK09705 110 GIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREV 188 (393)
T ss_pred HHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999997 78999999999999999999999999988875 8999988776665443332222211110
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (487)
+++++.. ...++.+++++.+...+..++
T Consensus 189 -----~~~~~~~-----------------------------------------------~~~~~~l~~~~~~~l~~~~~~ 216 (393)
T PRK09705 189 -----ASSHKTT-----------------------------------------------TTPVRVVFTPRAWTLGVYFGL 216 (393)
T ss_pred -----ccccCCC-----------------------------------------------cCCcccccCHhHHHHHHHHHH
Confidence 0000000 001123456666666666666
Q ss_pred HHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q 011369 342 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (487)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (487)
....+.....|.|.++++ .+.+.... ....+..++.++++++.+++.||+++| +....+..+..+........
T Consensus 217 ~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 217 INGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHHHHHc
Confidence 666777788899999987 67776655 555677788999999999999999988 55555554444443333222
Q ss_pred H-HHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-CCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 421 S-SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 421 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+ +.... ...+.+++.+...+.......+..+ ++.+++..|+. .....++..++|.+.|++.|+
T Consensus 291 ~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~~gp~~~G~l~~~ 355 (393)
T PRK09705 291 PLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFM-QGIGFIIAGLAPWFSGVLRSI 355 (393)
T ss_pred cchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222 2234455555555555545556665 47889999997 455566777899999999885
No 26
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=3.1e-34 Score=278.09 Aligned_cols=354 Identities=14% Similarity=0.098 Sum_probs=240.0
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhh-hHHH-----HHHHHHHHH
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLS-SAFM-----VGLLVASPI 136 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~-s~~~-----~~~~i~~~~ 136 (487)
+++....++++.+++++|+..++.. .|.+.+|++.++.+.+.+. +... ++..+++++
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~ 75 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFY-----------------ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIV 75 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHH
Confidence 3457788889999999999999864 4899999999888765443 3322 223468999
Q ss_pred HHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHH--------HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHH
Q 011369 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (487)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~--------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~ 208 (487)
.|+++||+|||++++.+.+++++++++++++++++ .++++|+++|++.+...+....+++|++|+++|++++
T Consensus 76 ~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~ 155 (434)
T PRK15075 76 LGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYT 155 (434)
T ss_pred HHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHH
Confidence 99999999999999999999999999999999987 4689999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHhhc--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhccccc
Q 011369 209 SMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 280 (487)
Q Consensus 209 ~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 280 (487)
++...+.++|..+++.+++.+. +.+|||++|++..+.. +.........||. ++....+.+
T Consensus 156 ~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~---------~~~~~~~~~-- 223 (434)
T PRK15075 156 SWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEET---------EEFLARKHR-- 223 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCC---------HHHHHhhhc--
Confidence 9999988888888887777652 4689999999864432 1111111111110 000000000
Q ss_pred CcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHH-HHHHHHHHhhheeeeecccceeee
Q 011369 281 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYN 359 (487)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~ 359 (487)
...+ +.++...+++..+.. .+..+......+.+..|.|.|+++
T Consensus 224 ---------------------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 267 (434)
T PRK15075 224 ---------------------------------PSMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT 267 (434)
T ss_pred ---------------------------------cccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 011222233333332 233334455566678889999988
Q ss_pred cccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH-HH-HHHH--HHHHHHHHHHHHH
Q 011369 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-FCLS--SLYGFLALFTVGE 434 (487)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~ 434 (487)
..|.+..+. ....+..++++++.++.|+++||++|| +.......+.....+ .. .... +.........+.+
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLS 342 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 778876554 444556677889999999999999998 444444333322211 11 1111 1222222223334
Q ss_pred HHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.+...+....+..|.+|++.|+++.++.+.....+++.++|.+.|++.|+
T Consensus 343 ~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 343 FLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 4444444444556778899999999999975556665567899999988775
No 27
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.3e-34 Score=274.22 Aligned_cols=327 Identities=21% Similarity=0.295 Sum_probs=246.7
Q ss_pred C-ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 S-GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~-~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
| .+.+++|.++.+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++..+++|++.++++|+++|++.
T Consensus 20 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 99 (352)
T PF07690_consen 20 PLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGS 99 (352)
T ss_dssp H-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccc
Confidence 6 789999999999999999999999999999999999999999999999999999777777788889999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+....++.|++|+++|++++++.....++|.++++.+++.+.+..+||+.|++.+++.++..++..++.++++++.
T Consensus 100 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~ 179 (352)
T PF07690_consen 100 GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPR 179 (352)
T ss_dssp HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTT
T ss_pred ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999998888775545554433222
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
.++++.++.. +..++..+.++.+.+++.+|......+....
T Consensus 180 ~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (352)
T PF07690_consen 180 ERESPKESES---------------------------------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFF 220 (352)
T ss_dssp T--SSTTTT-----------------------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHH
T ss_pred cccccccccc---------------------------------------ccccccccccccccccchhhhhhhhhhHHHH
Confidence 2211111100 0000000124455566666644455555555
Q ss_pred hheeeeecccceeeeccccc-ccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH---HHHH
Q 011369 345 VIGAYSYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFC 419 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 419 (487)
.......+.|.|+++.++.+ .... .+..+..+.++++.++.+++.||+++++ ..........+..+ ....
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 295 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-----RLLIAILLLILGALGLLLLPF 295 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----HHHHHHHHHHHHHHHHCCSHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 66668888999988888888 4444 4456667778888999999999999863 33222222222222 2223
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcc
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
.++....+...++.+++.+...+.......+..|++++|++.|+. .....+|..+||
T Consensus 296 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~~~~igP 352 (352)
T PF07690_consen 296 SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLF-NSIGSLGGIIGP 352 (352)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHHHHCC
Confidence 334455556677788888888888899999999999999999997 566666766665
No 28
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.9e-33 Score=271.05 Aligned_cols=376 Identities=13% Similarity=0.061 Sum_probs=266.1
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
|.++..+++.....+.+...++.. +|++.+++|.+.++.+++.+.+.++..++.+++|+++||
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr 80 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVF-----------------FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNR 80 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhh-----------------HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 446666666555555554444432 388999999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchhHHHHHH-HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhH
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 222 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~-~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 222 (487)
+|||++++.+.++.++++++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++.++.+.+..+|..++
T Consensus 81 ~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~ 159 (455)
T TIGR00892 81 FGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTL 159 (455)
T ss_pred cCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHH
Confidence 99999999999999999999999999999875 5799999999877778888999996 799999999999999999999
Q ss_pred HHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhh
Q 011369 223 YVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASER 302 (487)
Q Consensus 223 ~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (487)
|++++.+.+.+|||++|++.+++.++..+..+++.|+.......+++.+. . .+.... .+ +....
T Consensus 160 ~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~-~~---~~~~~---- 223 (455)
T TIGR00892 160 APLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKE-----G---LPPDGS-TK---KLSKK---- 223 (455)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccc-----c---CCCCCc-cc---ccccc----
Confidence 99999999999999999999998776665555554432110000000000 0 000000 00 00000
Q ss_pred hhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchh
Q 011369 303 SIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVG 381 (487)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 381 (487)
. ..+...+ ..++ +++++|.++...+..++...+......++|.|+++ .+.+.... .+.++..++.+++
T Consensus 224 --~------~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~ 292 (455)
T TIGR00892 224 --S------TAEKINR-FLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFA 292 (455)
T ss_pred --c------hhhhhhh-hcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHH
Confidence 0 0000000 1112 36788888888887777777777777888988876 57775555 4555667778888
Q ss_pred hhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHH
Q 011369 382 TISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSM 461 (487)
Q Consensus 382 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 461 (487)
++..+++.||.+.+.++. ..+..+........++....++.+.+++..++.+++.+...+.....+.+.+|+++++++.
T Consensus 293 ~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~ 371 (455)
T TIGR00892 293 RPSCGLIAGLKWIRPHVQ-YLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAV 371 (455)
T ss_pred HHHHHHHhcccccCHHHH-HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHH
Confidence 899999999743221110 2222222222233333333455666666677777777777777778888889999999999
Q ss_pred HHHHHHHHhhcCCCccceeeeeecc
Q 011369 462 AISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 462 g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
|+. .....+|.++||.++|.+.|.
T Consensus 372 g~~-~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 372 GLV-TIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred hHH-HHHHHHHHHccccceeeeehh
Confidence 997 666777999999999999874
No 29
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=3.6e-34 Score=275.90 Aligned_cols=381 Identities=17% Similarity=0.220 Sum_probs=267.3
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
++.+..+++..+..+++....+.. .|.+.+++|.++.+.+++.+.+.++..++.++.|+++||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 78 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMGFA-----------------APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADR 78 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-----------------HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 445555666666666666655532 388999999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
+|||+++..+.++.+++.++.+++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++
T Consensus 79 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 158 (398)
T TIGR00895 79 IGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGG 158 (398)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhh
Q 011369 224 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERS 303 (487)
Q Consensus 224 ~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (487)
.+++.+.+..+||+.|++.+++.++..++.++..||+++...++++++.....+. .......++ .+... +++
T Consensus 159 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~----~~~ 230 (398)
T TIGR00895 159 FLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNA---IAPQMQAEA-QSALP----EQK 230 (398)
T ss_pred HHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHH---HHHhccccc-ccccc----ccc
Confidence 9999999999999999999877776666666666765432111110000000000 000000000 00000 000
Q ss_pred hccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhh
Q 011369 304 IKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGT 382 (487)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 382 (487)
.+ . +..++..+..++..+.+..+...+..++..........+.|.+. +..+.+.... ....+..++.+++.
T Consensus 231 ~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~ 302 (398)
T TIGR00895 231 AT----Q---GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSLAATGGALFNFGGVIGS 302 (398)
T ss_pred cc----c---chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 0 00111111111112233344444444455555556667778444 4466665444 45556678889999
Q ss_pred hhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHH
Q 011369 383 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMA 462 (487)
Q Consensus 383 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g 462 (487)
++.+++.||+++| +.............++.....+.+..+...++.+++.+...+....+..+.+|++.|+++.|
T Consensus 303 ~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g 377 (398)
T TIGR00895 303 IIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVG 377 (398)
T ss_pred HHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 9999999999987 34433333333333333334455556667777888888888888888999999999999999
Q ss_pred HHHHHHHhhcCCCccceeeee
Q 011369 463 ISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 463 ~~~~~~~~~g~~~~p~~~g~l 483 (487)
+. .....+|.++||.+.|++
T Consensus 378 ~~-~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 378 WA-IGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HH-HHHHHHHHHHHHHhHHhc
Confidence 97 566777889999999876
No 30
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=3e-33 Score=268.20 Aligned_cols=328 Identities=16% Similarity=0.159 Sum_probs=250.1
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+|.+.+|+|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 44588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
+.+...+....++.|++|+++|++++++.+....+|..+++.+++.+.++.+||+.|++.+++.++..+..++..||.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 106 GASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred chhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999998999999999988877777666666555321
Q ss_pred CCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (487)
...+ +. .++..+.+++.+++|.++...+.....
T Consensus 186 ~~~~----~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR00710 186 YEAR----IQ-------------------------------------------ISTYFETFLLLLKSKMFWGYALIYGAS 218 (385)
T ss_pred Cccc----CC-------------------------------------------HHHHHHHHHHHHcCchhHHHHHHHHHH
Confidence 1100 00 000113455667888888777766666
Q ss_pred Hhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH-
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL- 420 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 420 (487)
.........+.|.++++..+.++... .+.....++.+++.++.+++.||+++| +.+..+..+..+..++....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 293 (385)
T TIGR00710 219 FGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITA 293 (385)
T ss_pred HHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 66666667778888887778776555 444556678889999999999999988 44444444333333222221
Q ss_pred ----HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 421 ----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 421 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
......+...++.+++.+...+.......+..| +.++++.++.+......|.+.+|.+ |.+.
T Consensus 294 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~-~~~~ 359 (385)
T TIGR00710 294 ILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV-SLIH 359 (385)
T ss_pred HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH-Hhcc
Confidence 122333444555666666666666666666664 6789999997666666676666654 4443
No 31
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=2.9e-32 Score=272.11 Aligned_cols=359 Identities=20% Similarity=0.308 Sum_probs=266.2
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch----------------
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---------------- 168 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---------------- 168 (487)
++.++++|+++..+.|++.+.+.++++++.++.|+++||+|||+++.+++++++++++++++.+
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 5899999999999999999999999999999999999999999999999999999999988763
Q ss_pred -----------------------------------hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHh
Q 011369 169 -----------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM 213 (487)
Q Consensus 169 -----------------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 213 (487)
.+..++++|+++|+|.+..++...+++.|++|+++|++++++++.
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 256778999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHHhhcccc----------------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCccc
Q 011369 214 CIPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 271 (487)
Q Consensus 214 ~~~~G~~~g~~~~~~l~~~~----------------------~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 271 (487)
+..+|..+|+++++.+.+.+ +||..|++.+++.++.++..+ ..|+..+.....++.+
T Consensus 216 ~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~~~~~~ 294 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGKRVNVD 294 (633)
T ss_pred HHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCcccccchh
Confidence 99999999999999877532 278889999888877766544 4454332211100000
Q ss_pred chhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeee
Q 011369 272 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 351 (487)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (487)
....+.. .. . + . ..+.......++.++.++++++||.++...+..++.....+++.+
T Consensus 295 ~~~~~~~----~~--~--~-------------~--~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 351 (633)
T TIGR00805 295 VHETEKL----EK--S--E-------------D--KSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT 351 (633)
T ss_pred hhhhhcc----cc--c--c-------------c--ccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00 0 0 0 000000012334556788899999999999999999999999999
Q ss_pred cccceeeecccccccce-eeeceeec-ccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHH------------
Q 011369 352 WGPKAGYNIYHMSNADM-MFGGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA------------ 417 (487)
Q Consensus 352 ~~p~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 417 (487)
|+|.|+++.++.++..+ .+..+..+ +.++|.+++|+++||++.+.+...+..++..++..+.....
T Consensus 352 ~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~ag 431 (633)
T TIGR00805 352 FLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAG 431 (633)
T ss_pred HHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccce
Confidence 99999999999987666 33333343 56789999999999998764322222222222222111100
Q ss_pred --------------HHH---------------------------------------------------------------
Q 011369 418 --------------FCL--------------------------------------------------------------- 420 (487)
Q Consensus 418 --------------~~~--------------------------------------------------------------- 420 (487)
...
T Consensus 432 v~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~ 511 (633)
T TIGR00805 432 VNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCN 511 (633)
T ss_pred eeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCC
Confidence 000
Q ss_pred ---HH-HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 421 ---SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 421 ---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
.+ ...++++.++..+..+....+.+.++.+.+|+++|+.+.|+.....+.+|.+-+|++.|++.|..
T Consensus 512 ~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 512 PPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred cccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 00 12334445555566667788889999999999999999999989999999999999999999963
No 32
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3.3e-33 Score=272.93 Aligned_cols=332 Identities=13% Similarity=0.047 Sum_probs=227.9
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|.+.+|+|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++++++|++.++++|+++|++.
T Consensus 59 ~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~ 138 (476)
T PLN00028 59 LPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSL 138 (476)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc----c-----ccchHHHHHHHHHHHHHHHHHHhh
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~----~-----~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
+... ....+++|++|+++|++++++.....++|..+++.+.+.+. + ..|||+.|++.+++.++..++.++
T Consensus 139 ~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 139 ATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8654 45678999999999999999998777777777766554432 1 258999999999988877766665
Q ss_pred ccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHH
Q 011369 256 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 335 (487)
Q Consensus 256 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (487)
+.++.+.. +.++..++ .+. +..+..+.+++.++++++|..
T Consensus 218 ~~~~~p~~-----~~~~~~~~-------------------------~~~----------~~~~~~~~~~~~~~~~~~~~~ 257 (476)
T PLN00028 218 LGQDLPDG-----NYRELKKS-------------------------GTM----------PKDSFSKVLRYGVTNYRTWIL 257 (476)
T ss_pred HcCcCCCC-----chhhHHhc-------------------------Ccc----------ccccHHHHHHHHHcCchhHHH
Confidence 54331110 00000000 000 000011235566788888877
Q ss_pred HHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhh--hHHHHHHHHHHHH
Q 011369 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA--FKLLSAATFLGAI 412 (487)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~ 412 (487)
.+.++........+..++|.|+.+..|.+.... .+..+..++++++++++|+++||+++|+..+ +........+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i 337 (476)
T PLN00028 258 ALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGV 337 (476)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHH
Confidence 776665555555567788999887778886655 5556777889999999999999999874221 1222333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccce
Q 011369 413 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (487)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~ 479 (487)
.++.....++.+..+..+++.+++.+...+....+..+ +.++.+|++.|+. .....+|.+++|.+
T Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~-~~~g~lg~~i~~~l 402 (476)
T PLN00028 338 FCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLT-GAGGNVGAVLTQLL 402 (476)
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhh-hccccHHHHHHHHH
Confidence 33333333333334444445555444444444444443 4567899998886 33333344444443
No 33
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.6e-33 Score=267.20 Aligned_cols=322 Identities=15% Similarity=0.141 Sum_probs=236.2
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|.+++|+|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.+++.+++++++|++.+++.|+++|++.
T Consensus 26 l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~ 105 (382)
T PRK10091 26 LTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPH 105 (382)
T ss_pred hHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+....++.|++|+++|+++++++..+..+|..+++++++.+.+..+||++|++.+++.++..+..++..||.+++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~- 184 (382)
T PRK10091 106 GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE- 184 (382)
T ss_pred HHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc-
Confidence 9988988999999999999999999999999999999999999999989999999999988777666665556663210
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
+ +... + +.. +.++++..+......++...
T Consensus 185 ---~-~~~~----------------------------------------~------~~~-~~~~~~~~~~~~~~~~~~~~ 213 (382)
T PRK10091 185 ---A-KGGL----------------------------------------R------EQF-HFLRSPAPWLIFAATMFGNA 213 (382)
T ss_pred ---c-ccCH----------------------------------------H------HHH-HHhcChHHHHHHHHHHHHHH
Confidence 0 0000 0 011 23455555555444444333
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH-HHH
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSS 422 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 422 (487)
+......+++.++++..|.++... .+.....++.+++.++.+++.||++++ +....+..+..+..++... .++
T Consensus 214 ~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~~ 288 (382)
T PRK10091 214 GVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGGM 288 (382)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHhh
Confidence 333344556667776677776555 555667788999999999999999988 5555555555544433332 333
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEEee-cCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 423 LYGFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.+...+..++.+.+.....++......+. .+++.++.+. . .....+|.++||.+.|++.|+
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 289 KTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--G-QIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--H-HHHHHHHHHHHHHHhHHHHHc
Confidence 33334444444444433333333222233 3335555443 3 345667889999999998874
No 34
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=1.6e-33 Score=269.90 Aligned_cols=347 Identities=12% Similarity=0.050 Sum_probs=257.7
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
+++...+++.++....+...++.. +|++.+++|+|+++.+++.+.+.+++.++++++|++.||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~g~~-----------------~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr 68 (394)
T PRK03699 6 IKLTWISFLSYALTGALVIVTGMV-----------------MGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEI 68 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-----------------hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777777776666643 489999999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
+|||++++.+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|+++++..+....+|..++|
T Consensus 69 ~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 148 (394)
T PRK03699 69 IPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFP 148 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc-cccchHHHHHHHHHHHHHHHHHHhhcc-ccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhh
Q 011369 224 VYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (487)
Q Consensus 224 ~~~~~l~-~~~~wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (487)
.+.+.+. +..+||+.|++.+++.++..++.++.. |+ .++++.. +. .
T Consensus 149 ~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~--~~---------~-------------- 196 (394)
T PRK03699 149 IIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA-------LGKHAPK--AD---------K-------------- 196 (394)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccccCcc--cc---------C--------------
Confidence 9888765 457999999998887766555443321 11 0000000 00 0
Q ss_pred hhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccch
Q 011369 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 380 (487)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 380 (487)
. ..+. ..++.++...+..++.....+.+..|.|.|+++.++.+..+. .+.+...++..+
T Consensus 197 ------------~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i 256 (394)
T PRK03699 197 ------------P-------VAKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMV 256 (394)
T ss_pred ------------c-------cccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHH
Confidence 0 0000 123455666666666666666778899999988888886655 445566678899
Q ss_pred hhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHH
Q 011369 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALS 460 (487)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 460 (487)
++++.+++.||+++| +.+.....+..+...+....++.+...+..++.+++.+..++.......+.. ++.++..
T Consensus 257 g~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~ 330 (394)
T PRK03699 257 GMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKL 330 (394)
T ss_pred HHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHH
Confidence 999999999999998 5555444444444444433444444445556666666655555554444444 3445677
Q ss_pred HHHHHHHHHhhcCCCccceeeeeecc
Q 011369 461 MAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 461 ~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.+.. .....+|..++|.+.|++.|.
T Consensus 331 ~g~~-~~~~~~g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 331 VNFI-LTCGTIGTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHH-HHhhhHHHHHHHHHHHHHHHH
Confidence 7776 556667889999999988774
No 35
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.1e-33 Score=268.48 Aligned_cols=351 Identities=12% Similarity=0.071 Sum_probs=260.4
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 145 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G 145 (487)
+...+.+..+...++...+. |.+|.+.+|+|.++.+.++..+.+.+++.+++++.|+++||+|
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~-----------------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g 76 (406)
T PRK15402 14 FPLCLVLFEFATYIANDMIQ-----------------PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIG 76 (406)
T ss_pred HHHHHHHHHHHHHhhhhhHh-----------------cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44444555555555555444 3458899999999999999999999999999999999999999
Q ss_pred CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHH
Q 011369 146 PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 225 (487)
Q Consensus 146 rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 225 (487)
||++++++.++.+++.++++++++++.+++.|+++|++.+...+....++.|++|+++|.+++++......+|..++|.+
T Consensus 77 ~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i 156 (406)
T PRK15402 77 RRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLV 156 (406)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999998888999999999
Q ss_pred HHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhc
Q 011369 226 GGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIK 305 (487)
Q Consensus 226 ~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (487)
++.+.++.+||+.|++.+++.++..+..++..||+.++.. ++
T Consensus 157 ~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--------------------------------- 198 (406)
T PRK15402 157 GAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVG-----EK--------------------------------- 198 (406)
T ss_pred HHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccc-----cc---------------------------------
Confidence 9999998999999999988887776665555565321100 00
Q ss_pred cccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhh
Q 011369 306 SIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTIS 384 (487)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 384 (487)
....+..++.+.++++|.++...+..++..........+.|.++++..+.++.+. .......++.+++.++
T Consensus 199 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~ 270 (406)
T PRK15402 199 --------LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLT 270 (406)
T ss_pred --------ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0001112345677888988887776666655555555667888777777776554 2223344567888999
Q ss_pred hhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhH
Q 011369 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 459 (487)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 459 (487)
.+++.||+++| +.+..+..+..+........ .+.++.....++.+++.+...+....... ..+++++|+
T Consensus 271 ~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~ 344 (406)
T PRK15402 271 LARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGT 344 (406)
T ss_pred HHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccH
Confidence 99999999987 55555544444333333221 23344455566666666665554433332 234588999
Q ss_pred HHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 460 SMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 460 ~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
..+.. ...+..|..+|+.+.|++.+.
T Consensus 345 ~~~~~-~~~~~~~~~~g~~~~~~l~~~ 370 (406)
T PRK15402 345 VSAAM-GMLSMLIFTVGIELSKHAYLG 370 (406)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHhcccC
Confidence 99997 666667778899998887764
No 36
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.2e-32 Score=259.84 Aligned_cols=345 Identities=14% Similarity=0.048 Sum_probs=258.2
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCcccc-ccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
.+|.+.+..+...+.+.....++.. .+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l-----------------~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~ 94 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAV-----------------TVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMV 94 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777777777777777753 256655 8999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcc-----hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 216 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 216 (487)
||+|.|+++.++.++.++.+++.+++ +|++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....+
T Consensus 95 Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~ 173 (462)
T PRK15034 95 PIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGN 173 (462)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHh
Confidence 99999999999999999999999987 8999999999999998 66889999999999999999999999977777
Q ss_pred hhhhhHHHHHHhhc------------------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhccc
Q 011369 217 TGVALGYVYGGVVG------------------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 278 (487)
Q Consensus 217 ~G~~~g~~~~~~l~------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 278 (487)
+|..++++++..+. +..+||.++++..++.++..++.++..++.+. ++..
T Consensus 174 ~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~------~~~~------ 241 (462)
T PRK15034 174 LGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS------SRAS------ 241 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc------cccC------
Confidence 77766655554322 13458999889888887777777776543111 0000
Q ss_pred ccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceee
Q 011369 279 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 358 (487)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 358 (487)
.++.+.++|+|..|..++.+++....+.++..++|.|.+
T Consensus 242 -----------------------------------------~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~ 280 (462)
T PRK15034 242 -----------------------------------------IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAK 280 (462)
T ss_pred -----------------------------------------HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134556889999999999999998888888889999988
Q ss_pred ecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHH
Q 011369 359 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL-----SSLYGFLALFT 431 (487)
Q Consensus 359 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~ 431 (487)
+.+. .... ....+..+.+.+.++++|+++||+|++ +++.++.+...+...... .. .+.+...+.+.
T Consensus 281 ~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~ 353 (462)
T PRK15034 281 TQFP--DVNILRLAFFGPFIGAIARSVGGAISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFM 353 (462)
T ss_pred HHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 7553 2222 112233467788889999999999998 666655554444432211 11 13444444444
Q ss_pred HHHHHHhccCCCeeEEEEeecCC---------------------CchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 432 VGELLVFATQAPVNYVCLHSVKP---------------------SLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
...++.+......+-++.+.+|+ ++.|.+.|+. .....+|+.+-|.+.|...+.
T Consensus 354 ~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v-~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 354 GLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFI-SAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHH-HHHHHcccchhhHHHHHHHHH
Confidence 45566666777777777777763 1567788885 677777888888887876654
No 37
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.2e-32 Score=271.74 Aligned_cols=385 Identities=16% Similarity=0.094 Sum_probs=248.7
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccc-----cccCccccchhhhHHHHHHHHHHHH
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGD-----FKLNNFQDGVLSSAFMVGLLVASPI 136 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~-----~~~s~~~~~~~~s~~~~~~~i~~~~ 136 (487)
..++++.++.++.+..++|...++.. +|.+.++ .+.++.+.+++.+.+.++..+++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~ 75 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLV-----------------TKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLF 75 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 44556777788889999999888764 2444432 3455667799999999999999999
Q ss_pred HHHhhhhcCCCeEehhHHHHHHHHHHHhhcchh------HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHH
Q 011369 137 FASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 210 (487)
Q Consensus 137 ~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~ 210 (487)
+|+++||+|||+++.++++++.++.++++++++ ++.++++|+++|++.|...+....+++|++|+++|++++++
T Consensus 76 ~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~ 155 (502)
T TIGR00887 76 FGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAA 155 (502)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHH
Confidence 999999999999999999999999999998876 78999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhHHHHHHhhcc-----------------------ccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCC
Q 011369 211 FYMCIPTGVALGYVYGGVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 267 (487)
Q Consensus 211 ~~~~~~~G~~~g~~~~~~l~~-----------------------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 267 (487)
.+....+|.++++.++..+.. .++||++|.+.++++++..+. .+.+||++++...+
T Consensus 156 ~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~ 234 (502)
T TIGR00887 156 VFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADV 234 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHh
Confidence 999999999999988765431 247999998888776654444 45669988753222
Q ss_pred Ccc----cchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcc-hhHHHHHHHHHHH
Q 011369 268 ESG----KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE-KVYVVNVLGYIAY 342 (487)
Q Consensus 268 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 342 (487)
++. ++...+....+. .+..++ .+..++ +.+. . + ...++.++... ..+. +.++......+..
T Consensus 235 ~~~~~~a~~~~~~~~~~~~--~~~~~~-~~~~~~---~~~~-~---~---~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 300 (502)
T TIGR00887 235 AKDVEQAASDMSAVLQVKI--EAEPDE-VEKAST---AVEV-P---K---ASWSDFFTHFF-KWRHGKHLLGTAGSWFLL 300 (502)
T ss_pred CcchHHHHHHHHHHhcccc--ccCccc-ccchhc---cccc-h---h---hhHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 111 111111100000 000000 000000 0000 0 0 01111111110 0011 2222223334444
Q ss_pred Hhhheeeeecccceeeecccccccce-------------eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHH
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-------------MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (487)
...+++...|.|.++++ .|.+.... ....+..++.+++.+++++++||+||| +.++.+..+
T Consensus 301 ~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~ 374 (502)
T TIGR00887 301 DIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFI 374 (502)
T ss_pred HHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHH
Confidence 55666777888888865 45543211 012233356667888999999999998 666555555
Q ss_pred HHHHHHHHHHHH-H--HHHHHHHHHHHHHHH-hccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 410 GAISCLTAFCLS-S--LYGFLALFTVGELLV-FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 410 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
..+++.+..... . ........++..++. .+..+....+..|.+|++.|+++.|+. ...+.+|++++|.+.|.+.|
T Consensus 375 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~-~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 375 LTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGIS-AASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHH-HHHhhhHHHHHHHHhhhhhc
Confidence 444443333221 1 111122222222222 223344456678888889999999997 56677788899999988776
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6.1e-33 Score=274.16 Aligned_cols=366 Identities=15% Similarity=0.139 Sum_probs=236.5
Q ss_pred CCccccccccC--------ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc---hhHHHH
Q 011369 105 GSGIQGDFKLN--------NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSI 173 (487)
Q Consensus 105 l~~i~~~~~~s--------~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l 173 (487)
+|.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.+++.++.+++.++ .+++.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (481)
T TIGR00879 51 LALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEML 130 (481)
T ss_pred hhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHH
Confidence 47777777776 7899999999999999999999999999999999999999999999998554 456689
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHH---HhhccccchHHHHHHHHHHHHHHH
Q 011369 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILMLPFA 250 (487)
Q Consensus 174 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~---~~l~~~~~wr~~f~~~~~~~~~~~ 250 (487)
+++|+++|++.+...+....++.|++|+++|++++++++.+..+|..++++++ ....+..+||+.|++.++..++..
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~ 210 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF 210 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 777777899999999666554444
Q ss_pred HHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhh---
Q 011369 251 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL--- 327 (487)
Q Consensus 251 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 327 (487)
+..++.||.++....+++.++.. +.........+...+..+...........+.. ...+.+.......
T Consensus 211 -~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 281 (481)
T TIGR00879 211 -LGLFFLPESPRWLVGKGRVEEAR-KSLARLRGTSGEDKELLDELELIDIKRSIEKR-------SVQPSWGSLFSSTRRI 281 (481)
T ss_pred -HHHhcCCCChHHHHHcCChHHHH-HHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHh-------hccccHHHHHhcCchh
Confidence 44445566432211111111100 00000000000000000000000000000000 0000011222222
Q ss_pred cchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHH
Q 011369 328 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (487)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (487)
+.+.++...+..+...........+.|.+.++ .+.+.... ....+..++.+++.++.+++.||++|| +.+..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~ 355 (481)
T TIGR00879 282 RRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLIG 355 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHH
Confidence 23445555555555555555666677776655 56665444 444566678889999999999999998 555555
Q ss_pred HHHHHHHHHHHHHH----HH------HHHHHHHHHHHHHHHhccC-CCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCC
Q 011369 407 TFLGAISCLTAFCL----SS------LYGFLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 407 ~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
.++.+++.+..... .+ ....+....+...+.+... +....+..+..|++.|+++.|+. .....+|.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~lg~~i 434 (481)
T TIGR00879 356 AAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIA-VAANWLANFI 434 (481)
T ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHH-HHHHHHHHHH
Confidence 55444444333311 11 2222333333334444444 33455557888889999999997 6667778889
Q ss_pred ccceeeeeecc
Q 011369 476 SSPLVGVLQVC 486 (487)
Q Consensus 476 ~p~~~g~l~~~ 486 (487)
+|.+.|++.|+
T Consensus 435 ~~~~~~~~~~~ 445 (481)
T TIGR00879 435 VGFLFPTMLES 445 (481)
T ss_pred HHHHHHHHHHh
Confidence 99988877653
No 39
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-33 Score=262.81 Aligned_cols=361 Identities=19% Similarity=0.231 Sum_probs=267.5
Q ss_pred CCCCccccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHH
Q 011369 56 PTPSWFTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASP 135 (487)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~ 135 (487)
++..++...+++..++..++..+.|+..++...+ -.+.+|.+....+.+++.++++++++++.+
T Consensus 36 ~~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l----------------~g~~edl~~~~~~l~~~~t~F~v~Yii~~~ 99 (495)
T KOG2533|consen 36 RKLLRKLDLFILPFLCYLYFHAYLDKSSIVNASL----------------SGLKEDLKLVGNQLGVLDTVFYVGYIIGQF 99 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchhcchhHHH----------------cCCccccchhhhhhhhHHHHHHHHHHHHHh
Confidence 3344555667788888889999999999987654 457799999999999999999999999999
Q ss_pred HHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhh
Q 011369 136 IFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCI 215 (487)
Q Consensus 136 ~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 215 (487)
++|.|.||++..+.+....+++++..++.+..+|++.+++.|+++|+.++..+|....+++.|+.+++|++.++++.+..
T Consensus 100 p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~ 179 (495)
T KOG2533|consen 100 PSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASA 179 (495)
T ss_pred hHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhc
Confidence 99999999999999999999999999888889999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHhh------ccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcc
Q 011369 216 PTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 289 (487)
Q Consensus 216 ~~G~~~g~~~~~~l------~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (487)
++|.++|.+++..+ ....||||.|++.|+++++..++.++++|+.+... +...+++
T Consensus 180 ~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~------~fl~~~e------------ 241 (495)
T KOG2533|consen 180 SLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA------WFLTDEE------------ 241 (495)
T ss_pred chhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhc------cccchHH------------
Confidence 99999999999886 34579999999999999999999999998855422 1100000
Q ss_pred cccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-
Q 011369 290 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM- 368 (487)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~- 368 (487)
++...+..++.+..... ++ ..+..+++.+++|.+|...+..++.....+++.+|+|.++.+..+++..+.
T Consensus 242 --k~~~~~~~~~~~~~~~~-----~~--~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~ 312 (495)
T KOG2533|consen 242 --KELVVERLRESPSGGIE-----NK--FKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQAN 312 (495)
T ss_pred --HHHHHHHHHhccCCCcc-----cc--cCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhc
Confidence 00000000000000000 00 223567888999999999999999999999999999999999666776666
Q ss_pred eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 011369 369 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL-GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 447 (487)
Q Consensus 369 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (487)
.+.....++++++.+++|+++||++.-...+ ........+ ..++......................+.....+.....
T Consensus 313 ~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~-~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 391 (495)
T KOG2533|consen 313 LLSTPYDVGGIVGLILAGYLSDRLKTIFARR-LLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSW 391 (495)
T ss_pred cccchHHhhhHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhh
Confidence 7777888999999999999999964111100 333333332 23332333333323333333333334444455555666
Q ss_pred EEeecCCCchhHH
Q 011369 448 CLHSVKPSLRALS 460 (487)
Q Consensus 448 ~~~~~~~~~r~~~ 460 (487)
..+...+..|...
T Consensus 392 ~s~~~~g~~k~~~ 404 (495)
T KOG2533|consen 392 TSANLAGNTKALT 404 (495)
T ss_pred ccccccchHHhHH
Confidence 6666666443333
No 40
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.2e-32 Score=267.39 Aligned_cols=375 Identities=13% Similarity=0.044 Sum_probs=251.8
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
++.+..+.+.+...+.++..+... .|.+++ +|+++.+.+++.+++.++..+++++.|+++||
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr 87 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALA-----------------MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDR 87 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhh-----------------hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhc
Confidence 345555566667777777665542 266665 69999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcc----hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhh
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV 219 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 219 (487)
+|||++++.+.++.+++.++.++. ++++.+.+.|++.|++.+..++....++.|++|+++|++++++++.+..+|.
T Consensus 88 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~ 167 (438)
T TIGR00712 88 SNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGG 167 (438)
T ss_pred cCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHh
Confidence 999999999999999998887764 5678889999999999999999899999999999999999999999999999
Q ss_pred hhHHHHHHhhc-cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhh
Q 011369 220 ALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQ 298 (487)
Q Consensus 220 ~~g~~~~~~l~-~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (487)
.+++.+.+... .+.+||+.|++.+++.++..++.+++.||.+++...++.++.. ++. + ++..+.
T Consensus 168 ~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~-----~~~~~~---- 232 (438)
T TIGR00712 168 GIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYR--NDY----P-----DDYNEK---- 232 (438)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcc--ccc----c-----cccccc----
Confidence 99888776544 4578999999999988887777777666643321111100000 000 0 000000
Q ss_pred hhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecc
Q 011369 299 ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVC 377 (487)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~ 377 (487)
.+.. .+.++.. .+.+++++.++...+..++.....+...+|+|.|+++..|.+.... ....+..+.
T Consensus 233 ----~~~~-------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~ 299 (438)
T TIGR00712 233 ----AEQE-------LTAKEIF--MQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYA 299 (438)
T ss_pred ----cccc-------cchHHHH--HHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHH
Confidence 0000 0001111 1246788888888777777776667778899999998778776555 444556678
Q ss_pred cchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCC
Q 011369 378 GIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 455 (487)
Q Consensus 378 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (487)
++++.+++|++.||++++++. ...........+..+..... .+.+......++.+++.............+..|++
T Consensus 300 ~~ig~~~~g~l~dr~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 377 (438)
T TIGR00712 300 GIPGTLLCGWMSDKVFKGNRG--ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK 377 (438)
T ss_pred HHHHHHHHHHHHHHhccCccc--HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh
Confidence 899999999999999654321 11111111111111111111 12222222233333322211111122345778889
Q ss_pred chhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 456 LRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 456 ~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.|+++.|+.+...+..|.+++|.+.|++.|+
T Consensus 378 ~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~ 408 (438)
T TIGR00712 378 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDF 408 (438)
T ss_pred heeeehhhhchHHHhhhhhhcchhHHHHHHh
Confidence 9999999975444444457899999998875
No 41
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.8e-32 Score=245.89 Aligned_cols=349 Identities=16% Similarity=0.111 Sum_probs=283.2
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 143 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr 143 (487)
++.+.+..+...+.+.-...++... +.+.+|+|+|+.|.+++.++..+...+..++.|.+.||
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~-----------------~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~dr 75 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLG-----------------VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDR 75 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-----------------hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcc
Confidence 4456666666666666666666543 66889999999999999999999999999999999999
Q ss_pred cCCCeEehhHHHHHHHHHHHhhcchh---HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhh
Q 011369 144 HNPFRLIGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 220 (487)
Q Consensus 144 ~Grr~~l~~~~~~~~~~~~~~~~a~~---~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 220 (487)
||.|++..++.++..+-++..+++.+ ++++++.+.+.|++.+ ...++..++++|+|||++|.++|+.. ..++|..
T Consensus 76 fGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~a 153 (417)
T COG2223 76 FGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVA 153 (417)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHH
Confidence 99999999999999999999998865 4599999999999877 77889999999999999999999999 8999999
Q ss_pred hHHHHHHhhccccc---hHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchh
Q 011369 221 LGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 297 (487)
Q Consensus 221 ~g~~~~~~l~~~~~---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (487)
+...++..+....+ ||.+-.+..+..++..+..++...+.+..+...++..
T Consensus 154 v~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-------------------------- 207 (417)
T COG2223 154 VAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-------------------------- 207 (417)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc--------------------------
Confidence 99999999998888 9999999999888888888888754322111100000
Q ss_pred hhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeec
Q 011369 298 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV 376 (487)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~ 376 (487)
+ ..++.++++++.|.+.+.++....++.++..++|.|++++++.++..+ .+.....+
T Consensus 208 --------------------~--~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~ 265 (417)
T COG2223 208 --------------------P--AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPL 265 (417)
T ss_pred --------------------h--hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHH
Confidence 0 235667889999999999999999999999999999999999998776 56666778
Q ss_pred ccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHhccCCCeeEEEE
Q 011369 377 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCL 449 (487)
Q Consensus 377 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (487)
.+.+.++.+|+++||+|.+ +........++++....... .+....+..+....++.+......+.++.
T Consensus 266 ~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip 340 (417)
T COG2223 266 IGALARPLGGWLSDRIGGR-----RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIP 340 (417)
T ss_pred HHHHHHhccchhhhhccch-----hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeech
Confidence 8889999999999999998 56666555555555544433 34555666666777788888888888888
Q ss_pred eecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 450 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 450 ~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
... +++.|.+.|+. .....+|+..-|...|...|.
T Consensus 341 ~if-~~~~G~v~G~v-ga~G~lGGf~lp~~~g~~~~~ 375 (417)
T COG2223 341 VIF-PKETGAVTGIV-GAIGGLGGFFLPLAFGVSLDL 375 (417)
T ss_pred HHH-HhhhhHHHHHH-HHhccccccchhHHHHHHHHh
Confidence 887 45778899986 777777888888887776654
No 42
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.98 E-value=4.5e-32 Score=260.41 Aligned_cols=329 Identities=10% Similarity=0.032 Sum_probs=233.1
Q ss_pred cccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHh
Q 011369 101 ICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (487)
Q Consensus 101 ~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (487)
|.|++|.+.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++
T Consensus 35 ~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 114 (413)
T PRK15403 35 IQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQ 114 (413)
T ss_pred hccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44677999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
|++.+...+....++.|++|+++|+++++++.....+|..+||++++.+.++.|||+.|++.+++.++..+..++..||+
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99998777788889999999999999999999999999999999999999888999999999988877766655556664
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
.+.. ++ +. ...+..++++++++||.++...+..+
T Consensus 195 ~~~~---~~-~~------------------------------------------~~~~~~~~~~~ll~~~~~~~~~l~~~ 228 (413)
T PRK15403 195 VKRG---AV-PF------------------------------------------SAKSVLRDFRNVFRNRLFLTGAATLS 228 (413)
T ss_pred cccc---CC-CC------------------------------------------ChHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 2210 00 00 00111245677889999998888877
Q ss_pred HHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHH--HHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA--TFLGAISCLTA 417 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 417 (487)
+.......+..+.|.++++.+|.+.... ........+..++..+.+.+.++..+++ ...... ..++.......
T Consensus 229 ~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~~~ig~~l~~~~ 304 (413)
T PRK15403 229 LSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPIQLVGLALLIVG 304 (413)
T ss_pred HHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHHHHHHHHHHHHH
Confidence 7777777777788999998888886655 3222333444555555555543332221 111111 11111111111
Q ss_pred --HHHHHHHHHHHHHHHHHHHHhccCCCee--EEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 418 --FCLSSLYGFLALFTVGELLVFATQAPVN--YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 418 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
...++.+..++..++.+++.+...+... .+.... ..+|++.++. ......+...++.+.|++
T Consensus 305 ~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~---~~~G~a~a~~-~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 305 NLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNN---LPKGTVSASL-NMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCC---CCCcHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 1122222334556666667666666665 332222 2368888876 334333444555555554
No 43
>TIGR00898 2A0119 cation transport protein.
Probab=99.98 E-value=1.3e-32 Score=272.76 Aligned_cols=350 Identities=15% Similarity=0.142 Sum_probs=243.8
Q ss_pred cCCCccccccccC---ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011369 103 TSGSGIQGDFKLN---NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (487)
Q Consensus 103 p~l~~i~~~~~~s---~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (487)
+..|.+.+|++++ +.+.+++.+++.++..++++++|+++||+|||++++++.++.+++.+++++++|++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4568899999999 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
.|++.+...+....++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+.. ++.||
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~e 265 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPE 265 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCC
Confidence 9999999999999999999999999999999999999999999999877654 9999999998877766655 55677
Q ss_pred ccCCCCCCCcccch---hhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHH
Q 011369 260 QLKGFAPAESGKAQ---VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 336 (487)
Q Consensus 260 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (487)
++++...+++.++. .++....+ .....++. ...... +..+. .+.....++++++|.++...
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~--~~~~~~~~---~~~~~~-~~~~~----------~~~~~~~~~l~~~~~~~~~~ 329 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKIN--GKKLPAEV---LSLSLE-KDLSS----------SKKQYSFLDLFRTPNLRKTT 329 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHc--CCCCCHHH---Hhhhhh-hhhhh----------ccCCCcHHHHhCChHHHHHH
Confidence 66543222111111 00000000 00000000 000000 00000 00012355667777766655
Q ss_pred HHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHH
Q 011369 337 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 416 (487)
Q Consensus 337 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (487)
+......+......+.++.+..+ .+.+. .....+..+..+++.++.+++.||+||| +.+.+..++.++.+++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~ 401 (505)
T TIGR00898 330 LCLMMLWFTTAFSYYGLVLDLGN-LGGNI--YLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLL 401 (505)
T ss_pred HHHHHHHHHHHHHHHHHhccccc-cCCCh--HHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHH
Confidence 54433333222221222222222 22221 1222344567788999999999999998 6666666666666555
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceee
Q 011369 417 AFCLSSL--YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (487)
Q Consensus 417 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g 481 (487)
.....+. +..++..++.+++.+..++..+.+..|.+|++.|+++.|+. .....+|++++|.+.+
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~-~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 402 LLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVC-STMARVGSIISPFLVY 467 (505)
T ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHH-HHHHHHHHHHHhHHHH
Confidence 5444332 34444555566666666677788889999999999999997 6677788899998877
No 44
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.98 E-value=3.2e-32 Score=260.08 Aligned_cols=331 Identities=17% Similarity=0.176 Sum_probs=245.1
Q ss_pred CcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011369 100 GICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (487)
Q Consensus 100 ~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (487)
++.|.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 88 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFL 88 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 45577899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
+|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..+...+..||
T Consensus 89 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (377)
T PRK11102 89 HGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPE 168 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999998999999999988887776666666665
Q ss_pred ccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHH
Q 011369 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (487)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (487)
+.++. ++++ .+.++..+++++.+++|.++...+..
T Consensus 169 ~~~~~----~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (377)
T PRK11102 169 TLPKE----RRQP-----------------------------------------FHLRTTIRNFASLFRHKRVLGYMLAS 203 (377)
T ss_pred cCccc----ccCC-----------------------------------------CChHHHHHHHHHHHcChHHHHHHHHH
Confidence 32110 0000 00001123455667788877776666
Q ss_pred HHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q 011369 340 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (487)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (487)
++...+...+..+.|.++.+..+.++.+. .+..+..++.+++.++.+++.||+++| +.+..+..+..+..+...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~ 278 (377)
T PRK11102 204 GFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLV 278 (377)
T ss_pred HHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHH
Confidence 66665666666677877777777776555 445566678889999999999999988 555554443322222111
Q ss_pred ---HHH-HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceee
Q 011369 419 ---CLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (487)
Q Consensus 419 ---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g 481 (487)
..+ +.+...+...+...+.+...........+.. |+.++++.++.+.....+|..+++.+.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 279 VSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 2333333333333333333333333344444 5889999999766556666666666543
No 45
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=4.1e-32 Score=261.87 Aligned_cols=348 Identities=17% Similarity=0.210 Sum_probs=253.3
Q ss_pred hHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCC
Q 011369 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (487)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 146 (487)
+..+++.++...+++...+.. +|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~-----------------~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~ 90 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDIL-----------------LPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY 90 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 344455556656666555542 389999999999999999999999999999999999999999
Q ss_pred CeEehhHHHHHHHHHHHh---hcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 147 FRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 147 r~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
|+++.++.+++.++++++ ++++|++.++++|+++|+|.|...+..+.++.|+.++++|.+.+++.+..+.+|..+++
T Consensus 91 r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~ 170 (438)
T PRK10133 91 KAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAV 170 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999885 56899999999999999999999999999999988877777789999999999999999
Q ss_pred HHHHhhcc-c-------------------------cchHHHHHHHHHHHHHHHHHH-hhccccccCCCCCCCcccchhhc
Q 011369 224 VYGGVVGS-H-------------------------LNWRYAFWGEAILMLPFAVLA-FVIKPLQLKGFAPAESGKAQVVA 276 (487)
Q Consensus 224 ~~~~~l~~-~-------------------------~~wr~~f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~ 276 (487)
.+++.+.. . .+||++|+....+..+..++. ....||.+. ++.+..
T Consensus 171 ~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~--- 242 (438)
T PRK10133 171 VFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA--- 242 (438)
T ss_pred HHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc---
Confidence 98875430 0 256667765443333222222 222233110 000000
Q ss_pred ccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccce
Q 011369 277 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKA 356 (487)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (487)
+..+..+..++++++|.++...+..++..........|.+.|
T Consensus 243 --------------------------------------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 284 (438)
T PRK10133 243 --------------------------------------KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRY 284 (438)
T ss_pred --------------------------------------cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111234567788888776666666666666666778877
Q ss_pred e-eecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 357 G-YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGE 434 (487)
Q Consensus 357 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (487)
+ ++..|.++... .......++.++|++.++++.||+++| +.+..+..+....+++....++. ..+..+.+.+
T Consensus 285 l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g 358 (438)
T PRK10133 285 AVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLCS 358 (438)
T ss_pred HhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHH
Confidence 5 56678887666 555667788899999999999999998 66666655555444444333333 2345567788
Q ss_pred HHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.+..+|.......+..++ +.+.+.++. . ....|+.++|.+.|.+.|.
T Consensus 359 lg~~~i~P~~~s~a~~~~~~-~~~~as~l~-~-~~~~g~~~~~~i~G~l~~~ 407 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQ-DTKYGSSFI-V-MTIIGGGIVTPVMGFVSDA 407 (438)
T ss_pred HHHHHHHHHHHHHHHcccch-hhccchhHH-h-HHhccchHHHHHHHHHHHh
Confidence 89999999999888888754 467788875 3 3446778899998988764
No 46
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=2e-32 Score=269.00 Aligned_cols=396 Identities=13% Similarity=0.097 Sum_probs=270.3
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN 145 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G 145 (487)
.+..++++.++..++...++. .+|.+.+|+|.++.+.+++.+.+.++..++.+++|+++||+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g 73 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNT-----------------ALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVG 73 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHH-----------------HHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 344556667777777766654 248899999999999999999999999999999999999999
Q ss_pred CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHH
Q 011369 146 PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 225 (487)
Q Consensus 146 rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~ 225 (487)
||++++.+.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+++|+++.++.....++|..+||.+
T Consensus 74 ~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 153 (471)
T PRK10504 74 VRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPAL 153 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcc----cccCcccCCCcccccccchhhhhh
Q 011369 226 GGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS----VSEGSEASNLNDHVSEDISDQASE 301 (487)
Q Consensus 226 ~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 301 (487)
++.+.++.+||+.|++..+...+..+......|+......+.+......... .....+..................
T Consensus 154 ~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (471)
T PRK10504 154 GGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAV 233 (471)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHH
Confidence 9999999999999999988777666666555554321111000000000000 000000000000000000000000
Q ss_pred hhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccch
Q 011369 302 RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIV 380 (487)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 380 (487)
............++..+...+. ++++||.+.......++..........+.|.|++...|.++... .......++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~ 312 (471)
T PRK10504 234 GVVALLLYLLHARNNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMG 312 (471)
T ss_pred HHHHHHHHHHHHhcCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence 0000000000000000011122 36789998888877777777766666778888887677776555 344444566677
Q ss_pred hhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCch
Q 011369 381 GTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 457 (487)
Q Consensus 381 ~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 457 (487)
+.++.+++.||+++| +.+..+..+..+...+.... .+.+......++.+++.+..++.......+.+|++.+
T Consensus 313 ~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 387 (471)
T PRK10504 313 MKRIVVQVVNRFGYR-----RVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLA 387 (471)
T ss_pred HHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhc
Confidence 778899999999998 66666666555544443332 2222223334455566666666666777778888999
Q ss_pred hHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 458 ALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 458 ~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
+.+.|+. .+...+|..+|+.+.|.+.+
T Consensus 388 g~~~~~~-~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 388 SSGNSLL-SMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred cchHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 9999996 67777788899999887755
No 47
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=1.1e-31 Score=264.81 Aligned_cols=374 Identities=14% Similarity=0.103 Sum_probs=237.9
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCcccccc--------ccCccccchhhhHHHHHHHHHH
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDF--------KLNNFQDGVLSSAFMVGLLVAS 134 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~--------~~s~~~~~~~~s~~~~~~~i~~ 134 (487)
..++..+..++.+..++|...++.. +|.++++| +.++.+.+++.+++.++..+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~ 72 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGT-----------------VESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGG 72 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHh-----------------HHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHH
Confidence 3456667777888888888888753 25555554 8889999999999999999999
Q ss_pred HHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc------------hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCC
Q 011369 135 PIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 202 (487)
Q Consensus 135 ~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------------~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~ 202 (487)
+++|+++||+|||++++++.++++++.++++++ ++++.++++|+++|++.|...+...++++|++|++
T Consensus 73 ~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~ 152 (479)
T PRK10077 73 ALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAH 152 (479)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChh
Confidence 999999999999999999999999998887763 23677899999999999999999999999999999
Q ss_pred chhHHHHHHHhhhhhhhhhHHHHHHhhc--------cccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchh
Q 011369 203 QKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 274 (487)
Q Consensus 203 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 274 (487)
+|++++++.+.+..+|.++++.+++.+. +.+|||+.|++.+++.++..+. .++.||++++...+++.++..
T Consensus 153 ~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~~ 231 (479)
T PRK10077 153 IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQAE 231 (479)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHHH
Confidence 9999999999999999999988776543 4579999999998887776544 455677543211111111000
Q ss_pred hcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcch--hHHH-HHHHHHHHHhhheeeee
Q 011369 275 VASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK--VYVV-NVLGYIAYNFVIGAYSY 351 (487)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~ 351 (487)
.... ...... +..+..++. . ...++.....+..+... .+.. .....+....+.+...+
T Consensus 232 ~~~~--~~~~~~---~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (479)
T PRK10077 232 GILR--KIMGNT---LATQALQEI-K-------------HSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLY 292 (479)
T ss_pred HHHH--HHcCCh---hHHHHHHHH-H-------------HHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHH
Confidence 0000 000000 000000000 0 00000000000011100 0110 11111222222333445
Q ss_pred cccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH--HHH--HHH
Q 011369 352 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSL--YGF 426 (487)
Q Consensus 352 ~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~ 426 (487)
+.|.+.++ .+.+.... .......+..+++.+++++++||++|| +.+..+..+.++..+..... .+. ...
T Consensus 293 ~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 293 YAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 56766654 45554333 333445677788999999999999998 66666666666555444322 111 122
Q ss_pred HHHHHHHHHHHhccC-CCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcccee
Q 011369 427 LALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 480 (487)
Q Consensus 427 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~ 480 (487)
....++.+++.+..+ +....++.+.+|++.|+++.|+. ...+.+|.++++.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~-~~~~~~g~~~~~~~~ 420 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIA-VAAQWIANYFVSWTF 420 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 233344444444333 44567788888889999999997 556665666664443
No 48
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=3.5e-31 Score=251.96 Aligned_cols=324 Identities=17% Similarity=0.141 Sum_probs=228.4
Q ss_pred CCc-cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch-hHHHHHHHHHHhhh
Q 011369 105 GSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGV 182 (487)
Q Consensus 105 l~~-i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G~ 182 (487)
+|. +++++|+|+.+.+++.+++.+++.++++++|+++||+|||+.++++.++..++.+++++++ +++.+++.|+++|+
T Consensus 24 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 103 (366)
T TIGR00886 24 AVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGI 103 (366)
T ss_pred hhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 474 8999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc----------ccchHHHH-HHHHHHHHHHHH
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLPFAV 251 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~~wr~~f-~~~~~~~~~~~~ 251 (487)
+.+. .+....++.|++|+++|++++++.....++|..+++.+++.+.. +.+||+.| ++.+++.++..+
T Consensus 104 ~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 182 (366)
T TIGR00886 104 AGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPAL 182 (366)
T ss_pred hchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHH
Confidence 9664 56678999999999999999999998888888888777766553 34899999 444655555555
Q ss_pred HHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchh
Q 011369 252 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 331 (487)
Q Consensus 252 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (487)
+.++..+|.+++..+++ +.. .+. + ....+ ++..+..++.+++|.
T Consensus 183 ~~~~~~~~~~~~~~~~~--~~~-~~~------------~-~~~~~--------------------~~~~~~~~~~~~~~~ 226 (366)
T TIGR00886 183 LIFFVGADTPPGKPATG--KLS-FKG------------A-RWSVG--------------------TGALGDQLKVFRDRH 226 (366)
T ss_pred HHHHhcccCCcccccch--hcc-ccc------------c-ccccc--------------------chhHHHHHHHHhccc
Confidence 55555555332111000 000 000 0 00000 000013445677888
Q ss_pred HHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHH
Q 011369 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 410 (487)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 410 (487)
++...+..+...........+.|.|+++.++.++.+. .+..+..+.+++++++.|++.||+++| +.........
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~ 301 (366)
T TIGR00886 227 TWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSFLGV 301 (366)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHHHHH
Confidence 8877777776666666777888999988888876555 455566678889999999999999998 3333333322
Q ss_pred HHHHHHHH-H-HH--HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhc
Q 011369 411 AISCLTAF-C-LS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (487)
Q Consensus 411 ~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (487)
.....+.. . .. +.+..+....+..++.+...+.......+.. ++++|++.|+. .....+|
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~-~~~~~~g 365 (366)
T TIGR00886 302 AMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLV-GAIGNLG 365 (366)
T ss_pred HHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHH-HHhccCC
Confidence 22222222 1 21 3444445555555666666666666666666 47999999986 4444433
No 49
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.97 E-value=8.7e-32 Score=258.89 Aligned_cols=342 Identities=13% Similarity=0.089 Sum_probs=237.4
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCc-cccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~-i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
++-+..+++..+...++...... .+|. +.+++|.|+.+.|++.+++.+++.+++++.|+++|
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~-----------------~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~D 76 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLA-----------------VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYAD 76 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHh
Confidence 34455566666666655554432 2354 67899999999999999999999999999999999
Q ss_pred hcCCCeEehhHHHHHHHHHHHhhcc--------hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhh
Q 011369 143 SHNPFRLIGVGLSVWTFATAGCGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 214 (487)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a--------~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 214 (487)
|+|||++++.+.++.+++.+.++++ .+++.+++.|+++|++.+...+....++.|++|+|+|++++++...+
T Consensus 77 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 156 (399)
T PRK05122 77 TLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIA 156 (399)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhh
Confidence 9999999999999888877666543 25778999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCccccccc
Q 011369 215 IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (487)
Q Consensus 215 ~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (487)
..+|.++|+++++.+.+..|||+.+++.++..++..+.. ...|+. ++++.++
T Consensus 157 ~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~---------------------- 208 (399)
T PRK05122 157 TYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAV-----PPVKGER---------------------- 208 (399)
T ss_pred hhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCC-----CCCCccc----------------------
Confidence 999999999999999999999999888766544332221 111211 0000000
Q ss_pred chhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeecee
Q 011369 295 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVT 374 (487)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 374 (487)
. +.++.++ ..+.......+....+.....++|.|+.+. +.+... ......
T Consensus 209 -------------------~-------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~ 258 (399)
T PRK05122 209 -------------------L-------PFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GWDGAA-LALTLF 258 (399)
T ss_pred -------------------h-------hHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccch-HHHHHH
Confidence 0 0000111 011111111222223333445566666543 333211 222345
Q ss_pred ecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCC
Q 011369 375 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 454 (487)
Q Consensus 375 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (487)
.++.+++.++.+++.||+++| +.+..+..+..+..+.....++.+..++..++.+++.+..++.......+..|+
T Consensus 259 ~~~~~~~~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~ 333 (399)
T PRK05122 259 GVAFVGARLLFGNLINRLGGL-----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPP 333 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCH
Confidence 567788999999999999987 566555555555554444455555566666777777776666655566678888
Q ss_pred CchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 455 SLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 455 ~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+.|+++.|+. .....+|..++|.+.|++.|+
T Consensus 334 ~~~g~~~g~~-~~~~~~g~~~~~~~~g~l~~~ 364 (399)
T PRK05122 334 QNRGAALGAY-SVFLDLSLGITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999997 556666777788888887764
No 50
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=2.7e-31 Score=254.16 Aligned_cols=323 Identities=13% Similarity=0.076 Sum_probs=237.9
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
+.+++++|.|+.++|++.+.+.++..+.+++.|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|++.+
T Consensus 35 ~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 114 (400)
T PRK11646 35 IRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGT 114 (400)
T ss_pred HHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (487)
...+...+++.|++|+++|++++++.....++|..+||++++.+. .++||+.|++.++..++..++..+..||...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~--- 190 (400)
T PRK11646 115 LFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL--- 190 (400)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc---
Confidence 899999999999999999999999999999999999999999998 6899999999988777666555555454110
Q ss_pred CCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhh
Q 011369 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (487)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (487)
+ +.+. +..+++++++++|.++...+..+.....
T Consensus 191 --~-~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (400)
T PRK11646 191 --S-TVRT--------------------------------------------PVREGMTRVLRDKRFVTYVLTLTGYYML 223 (400)
T ss_pred --c-ccch--------------------------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHH
Confidence 0 0000 0012345567777776655544433333
Q ss_pred heeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhh-hcccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLSSL 423 (487)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (487)
......+.|.|+++..+.+ ... .+.++..+...++....+++.|| ++.+ +.+..+..+..+..+.....++.
T Consensus 224 ~~~~~~~~p~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~ 297 (400)
T PRK11646 224 AVQVMLMLPIMVNDIAGSP-SAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNL 297 (400)
T ss_pred HHHHHHhhhhhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhH
Confidence 3334467888888765533 232 33233333343334444555543 4433 33444444444444444444555
Q ss_pred HHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 424 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+..+...++.+.+.+...+....+..+..|+++||++.|+. .....+|..+||.+.|++.|+
T Consensus 298 ~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 298 QQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFS-RLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHH-HHHHHHHHHhcccchHHHHHH
Confidence 54555555666666666777778888899999999999996 667777889999999999875
No 51
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.97 E-value=8.8e-32 Score=266.48 Aligned_cols=386 Identities=13% Similarity=0.116 Sum_probs=252.0
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
.+++.+..+++..+...++...++.. +|.+.+++|+++.+.+++.+.+.+++.++.++.|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~ 79 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLV-----------------LTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMG 79 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34557777888888888888877753 3889999999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
||+|||++++++.++.+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+
T Consensus 80 dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 159 (496)
T PRK03893 80 DRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVV 159 (496)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhh
Q 011369 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASE 301 (487)
Q Consensus 222 g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (487)
++.+++.+.+.++||+.|++.++..+ ..++.....|+..+...++++.... .+..+........
T Consensus 160 ~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~ 223 (496)
T PRK03893 160 AAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPEAEDWKEKHAGKAPV---------------RTMVDILYRGEHR 223 (496)
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCCchhhhhhccccccc---------------hhHHHHHhcchhH
Confidence 99999999999999999987544332 2222222234422110000000000 0000000000000
Q ss_pred hhhcccc-------ccchhhhhhhhh-------------HHH--H-hhhcchhHHHHHHHHHHHHhhheeeeecccceee
Q 011369 302 RSIKSIG-------ESRFLNQLSQFS-------------QDT--K-VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 358 (487)
Q Consensus 302 ~~~~~~~-------~~~~~~~~~~~~-------------~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 358 (487)
....... .........+.+ ... + ...+.+.........+...........++|.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 303 (496)
T PRK03893 224 IINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLK 303 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 0000000 000000000000 000 0 0001111111111111111112234567899997
Q ss_pred ecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Q 011369 359 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGEL 435 (487)
Q Consensus 359 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 435 (487)
+..|.+..+. .+.....++.+++.++.|++.||+++| +.+..+..+..+..+..... .+.+......++.++
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 7778876555 555667788899999999999999988 55555544444433322222 222222222233233
Q ss_pred HHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 436 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
......+....+..+.+|++.|++++|+. .....+|..+||.+.|++.|+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDTEQRAAGLGFT-YNVGALGGALAPILGALIAQR 428 (496)
T ss_pred HhcccchhhHHHHHhhCCHHHhhcccchh-hhhhhHHHHHHHHHHHHHhcc
Confidence 33333444555667888889999999997 556667888999999998875
No 52
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.8e-31 Score=255.10 Aligned_cols=345 Identities=16% Similarity=0.151 Sum_probs=258.4
Q ss_pred hHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCC
Q 011369 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (487)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 146 (487)
+..+++.++..+++....+. .+|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+||
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~-----------------l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~ 67 (410)
T TIGR00885 5 FALITSLFALWGFANDITNP-----------------MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY 67 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHH-----------------HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34455555555555555443 3489999999999999999999999999999999999999999
Q ss_pred CeEehhHHHHHHHHHHHhhc---chhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 147 FRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 147 r~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
|++++++.++++++.+++.. .+|++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++
T Consensus 68 r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~ 147 (410)
T TIGR00885 68 KAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGM 147 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988644 468999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcc--------------------------ccchHHHHHHHHHHHHHHHHHHhhc-cccccCCCCCCCcccchhhc
Q 011369 224 VYGGVVGS--------------------------HLNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVA 276 (487)
Q Consensus 224 ~~~~~l~~--------------------------~~~wr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~ 276 (487)
.+++.+.. ..+||++|++.+++.++..++..+. .|+.. ++++++.
T Consensus 148 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~----~~~~~~~---- 219 (410)
T TIGR00885 148 VVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALN----HSDAKQI---- 219 (410)
T ss_pred HHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----ccccccc----
Confidence 99887742 2469999999998776655444322 12210 0000000
Q ss_pred ccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccce
Q 011369 277 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKA 356 (487)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 356 (487)
+..+..++++++|.++...+..+++.........+++.|
T Consensus 220 -----------------------------------------~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y 258 (410)
T TIGR00885 220 -----------------------------------------SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQY 258 (410)
T ss_pred -----------------------------------------cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000123456788888887777777777776677888888
Q ss_pred eeecc-cccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 357 GYNIY-HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGE 434 (487)
Q Consensus 357 ~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (487)
.++.. +.+.... ...........+|+++++++.||+++| +.+.+......+.+++....++.. ....+.+.+
T Consensus 259 ~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~g 332 (410)
T TIGR00885 259 AVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCS 332 (410)
T ss_pred HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 86532 2222111 233344466789999999999999988 677777777666666666554433 355666777
Q ss_pred HHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.+..+|.......+..+++.+..+.++. + ..+|+.+.|.+.|++.|+
T Consensus 333 lf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~--~~~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 333 AFMSLMFPTIYGIALKGLGQDTKYGAAGLV-M--AIIGGGIVPPLQGFIIDM 381 (410)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-H--HHhccchHHHHHHHHHHH
Confidence 888888899999999999776554455543 3 348999999999999983
No 53
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=2.6e-31 Score=253.73 Aligned_cols=323 Identities=11% Similarity=0.066 Sum_probs=230.2
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehh-HHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV-GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~-~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
.+++++|.|+.+.|++.+++.++..+.+++.|+++||+||||.+++ +..+..++.+++++++|++.+++.|+++|.+.+
T Consensus 23 ~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 102 (375)
T TIGR00899 23 FLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAS 102 (375)
T ss_pred HHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhh
Confidence 3678999999999999999999999999999999999999987654 566667778888999999999999999998888
Q ss_pred hhhhhhhhhhhhcCCCCchhHH--HHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCC
Q 011369 186 SFISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (487)
...|....++.|+.|+++|++. .+....+.++|..+|+++++.+.+.++||+.|++.+++.++..++.++..||.+++
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 8889888999999988777754 57888888999999999999999989999999999998777777776666763321
Q ss_pred CCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHH
Q 011369 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (487)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (487)
..+++ +. .+.++.++++.++......+...
T Consensus 183 ~~~~~--~~------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 212 (375)
T TIGR00899 183 APGAL--TR------------------------------------------------LEVRGLLASRDTRLLFVACTLMW 212 (375)
T ss_pred ccccc--Cc------------------------------------------------chhhhhhcCcchHHHHHHHHHHH
Confidence 10000 00 00112344555544444333333
Q ss_pred hhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011369 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (487)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (487)
........+.|.++++..+.++... .+........+++.++.|++.||+++| +.+.................++
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 287 (375)
T TIGR00899 213 GCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNS 287 (375)
T ss_pred HHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345567888877777776544 333333345566788999999999988 5555554444444333334445
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.+..+....+.+++.+...+....+..+.. |++++++.++. .....+|..++|.+.|++.|.
T Consensus 288 ~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~g~~~g~~~~g~~~~~ 349 (375)
T TIGR00899 288 LWALLMLQLLNAIFIGILAGIGMLYFQDLM-PGRAGAATTLY-TNTGRVGWIIAGSVGGILAER 349 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-cchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 555555555666666655555555555555 45677999997 445557888999999988764
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=6.8e-31 Score=252.24 Aligned_cols=328 Identities=13% Similarity=0.135 Sum_probs=234.3
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh---c-chhHHHHHHHHHHhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-a~~~~~l~~~r~l~G 181 (487)
+.+.+|+|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++. + .++++.+++.|+++|
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G 116 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG 116 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence 556688999999999999999999999999999999999999999999999988876552 3 358899999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhh-hhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
++.+...+....++.+++|+++|++++|+.+.+.++|. .+++++++.+.+..||+..+|......++..++.++..++.
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99998888888899999999999999999999999997 68999999999888977666655444444344444443332
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
++ +++.++. ++..+..+.++.++++|.++...+..+
T Consensus 197 ~~----~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 197 FT----PQHMQTR----------------------------------------EKFSELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred CC----cccccCC----------------------------------------cchhhHHHHHHHHHcChhHHHHHHHHH
Confidence 11 0000000 000011134556788999988877777
Q ss_pred HHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHH-HHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAF 418 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 418 (487)
+.....+...++.|.|+++ .+.+..+. .+.....++..++.+..|+++||+++|+ ... .......+......
T Consensus 233 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHH
Confidence 7777777778899998866 67776554 4445566888999999999999999873 322 22222222111111
Q ss_pred H-----HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 419 C-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 419 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
. .++.+..++..++.+++.+...+ ..... .+.+|++|+++.|+. .....+|..++|.+.|.+.|.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~-~~~~~~~~g~~~g~~-~~~~~lg~~~gp~i~g~l~~~ 376 (402)
T TIGR00897 307 YIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVF-PTLAPKHKGAAMSVL-NLSAGLSAFLAPAIAVLFIGF 376 (402)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHH-HhhCcchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 1 12334444455555655554322 23333 345678999999997 556666888999999988875
No 55
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.97 E-value=5.6e-31 Score=254.51 Aligned_cols=328 Identities=10% Similarity=0.008 Sum_probs=244.3
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc-----chhHHHHHHHHHHh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~ 180 (487)
|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+..+. .++++.+++.|+++
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 7788889999999999999999999999999999999999999999998888777665442 57889999999999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
|++.+...+...+++.|++|+++|+++.++.....++|..+|+.+++.+.+..+||+.|++.++..++..++.+ ..|+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 99999888999999999999999999999999999999999999999999888999999998877665554433 33442
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
+++. + +++ +..++..+.++.++++|.++...+..+
T Consensus 200 ~~~~---~-~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (417)
T PRK10489 200 PPPP---Q-PRE-----------------------------------------HPLRSLLAGFRFLLASPVVGGIALLGG 234 (417)
T ss_pred CCCC---c-ccc-----------------------------------------cchHHHHHHHHHHHcChHHHHHHHHHH
Confidence 2110 0 000 000011123445667777665554444
Q ss_pred HHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (487)
+... ...+..++|.|.++..|.+.... .+.....++.+++.++.+++.||.+++ +.+..+..+..+..++...
T Consensus 235 ~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 235 LLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHc
Confidence 3332 34456678999988778776554 444556677888889999998885554 4555555544444444444
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.++.+...+..++.+++.+...+....+..+..|++.||++.|+. ...+.+|..+||.+.|++.|.
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~-~~~~~~g~~~g~~l~G~l~~~ 374 (417)
T PRK10489 309 MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLW-TAQNVTGDAIGAALLGGLGAM 374 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH-HHHHhhhHhHHHHHHHHHHHH
Confidence 455555555666666666655555567778888889999999997 667777999999999998875
No 56
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=1.5e-30 Score=226.99 Aligned_cols=389 Identities=13% Similarity=0.091 Sum_probs=266.8
Q ss_pred ccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 62 TPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
..+.........+....+.....+.. .|.+.+.+|.+..|..++......|..+++..||.++
T Consensus 75 fq~yl~~~ag~gwmad~m~~m~~s~i-----------------~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~ 137 (528)
T KOG0253|consen 75 FQWYLFFVAGMGWMADAMEMMLLSLI-----------------LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSA 137 (528)
T ss_pred chhhHHHHhhhHHHHHHHHHHHHHHH-----------------HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheeh
Confidence 33445666655555555444444432 2778889999999999999999999999999999999
Q ss_pred hhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 142 KSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 142 dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
|++|||+.+.+..+..++..++.+.++|+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+.
T Consensus 138 d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ 215 (528)
T KOG0253|consen 138 DTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVF 215 (528)
T ss_pred hhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHH
Confidence 999999999999999999999999999999999999999999998 899999999999999999877777 899999999
Q ss_pred HHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccch---hhc---ccccCcccCCCcccccccc
Q 011369 222 GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ---VVA---SVSEGSEASNLNDHVSEDI 295 (487)
Q Consensus 222 g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~ 295 (487)
...++.....++||||.....+.+..+.++ ..+++||+++..-.+.++.+. ..+ .+....+......+...+.
T Consensus 216 ea~law~vm~~~gwr~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~ 294 (528)
T KOG0253|consen 216 EALLAWGVMSNFGWRYLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQ 294 (528)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhh
Confidence 999999999999999999988866544444 455568887654332222211 111 1111111111111111111
Q ss_pred hhhhhh-hhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeee-----------------ccccee
Q 011369 296 SDQASE-RSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY-----------------WGPKAG 357 (487)
Q Consensus 296 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~p~~~ 357 (487)
+++... ++.+....+.......+.+. .-+++. .+.....++...+.+++... ..|.+.
T Consensus 295 e~e~~~~~~~~~~a~ke~rg~~~nLls---p~lrkt-tlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~ 370 (528)
T KOG0253|consen 295 EQEESDLDDSKSSAAKEVRGGTTNLLS---PKLRKT-TLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTEL 370 (528)
T ss_pred hhhhhchhhhhhccccccccchHhhcC---hHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHH
Confidence 111000 00000000000011111111 112222 22222233333333333322 233333
Q ss_pred eeccc---ccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 358 YNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGE 434 (487)
Q Consensus 358 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (487)
+...+ .+....--..+..+..+.|.++.++++||+||| +.+....++..++.+.+....+......+.+...
T Consensus 371 e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~ar 445 (528)
T KOG0253|consen 371 ETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTAR 445 (528)
T ss_pred HhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHH
Confidence 22111 111111112345678899999999999999999 8899999999998888888777777788888899
Q ss_pred HHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcccee
Q 011369 435 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 480 (487)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~ 480 (487)
++..+.+...+.+.++.+|+..|+++.|.+ ..++.+|+++.|.++
T Consensus 446 afisg~fqvaYvYtPEVyPTavRatgvGtc-SsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 446 AFISGAFQVAYVYTPEVYPTAVRATGVGTC-SSMARIGGIFSPVIA 490 (528)
T ss_pred HHHhchheEEEEecCcccchhhhhcchhhh-hhHHhhhhhhhhHHH
Confidence 999999999999999999999999999998 888999999999775
No 57
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=5.7e-31 Score=252.67 Aligned_cols=328 Identities=12% Similarity=0.069 Sum_probs=236.0
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+|.+.+++|.|+.+.+++.+++.++..++++++|+++||+|||+++.++.++..++.+++.+++|++.+++.|++.|+
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 108 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL 108 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
+.+...+....+..|.+++++|+++.++...+..+|..++|.+++.+.+..|||+.|++.+++.++..++..+..||.++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred hhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 99988888889999999999999999999999999999999999999988999999999988777666555555565321
Q ss_pred CCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (487)
.. +++. +..+.+++.+++|.++...+..+..
T Consensus 189 ~~-----~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (394)
T PRK11652 189 AD-----ARRT--------------------------------------------RVLASYRTLLSNRRFNCYLLMLIGT 219 (394)
T ss_pred cc-----cchh--------------------------------------------HHHHHHHHHHcChHHHHHHHHHHHH
Confidence 10 0000 0113455667777776655554444
Q ss_pred Hhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH--
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 419 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 419 (487)
......+..+.+.++++..+.+.... .+.....++.+++..+.+++.||.+++. ........+..........
T Consensus 220 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 295 (394)
T PRK11652 220 LAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM----WQSVICCLLAGLLMWIPGWFG 295 (394)
T ss_pred HHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhc
Confidence 44444445556777777677775444 3333334455556666666666665220 1211222222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
..+.+......++.+++.+...+.......+..| ++++++.++. .....+|..+++.+.|.+.+
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~-~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 296 VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALL-GGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHH-HHHHHHHHHHHHHHHHHccC
Confidence 1233445555666677777777777776667664 6789999997 55566787888888777654
No 58
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=4.7e-31 Score=250.96 Aligned_cols=343 Identities=15% Similarity=0.167 Sum_probs=261.1
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 186 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g~ 186 (487)
..+++.++.+.+++.+.+..|+.+++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999998875 456889999999999999
Q ss_pred hhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 011369 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (487)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (487)
.+|+...+.+.|.|++||++..++..++..+|.+++.+++|++.+. +||+++|++.++++++..++.+++..+++.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999988887777655433321
Q ss_pred CCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhh
Q 011369 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (487)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (487)
.-.+++ .+.+++...++..+ .+...+++++++++.+|...+..+....+
T Consensus 225 ~is~~E--------------------l~~I~~~k~~~~~~-----------~~~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 225 NISEKE--------------------LKYIEKGKSEAHVK-----------KKPPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred CCCHHH--------------------HHHHHhcccccccC-----------CCCCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 111100 01111111100000 00224688999999999999999999999
Q ss_pred heeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccc---hhhhHHH-HHHHHHHHHHHHHHHHH
Q 011369 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKLL-SAATFLGAISCLTAFCL 420 (487)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~ 420 (487)
.+.+..|+|.|+++..+++..+. .+.+++.+...+..+++|.++||+.+|. ...++.+ .++....+++++.+...
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 99999999999999999997777 7778999999999999999999998741 1112333 33344444444444444
Q ss_pred HH--HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 421 SS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 421 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
+. .+..++++.+.....+ ..............|++.+..+|+. +....+.++++|.+.|.+.
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g-~~~~Gf~~~~~~~apq~a~~l~g~~-~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSG-FNISGFYKNHQDIAPQHAGFVMGII-NFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred CCCcchHHHHHHHHHHHHcc-cchhhhHhhhhhccchHHHHHHHHH-HHHHHHHHHHHHHheeeEe
Confidence 42 2223333333222222 2222233333332578999999997 5566667789999999987
No 59
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=4.7e-31 Score=253.07 Aligned_cols=318 Identities=14% Similarity=0.073 Sum_probs=221.7
Q ss_pred CCc-cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hc-----chhHHHHHH
Q 011369 105 GSG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS-----SFDFWSIAI 175 (487)
Q Consensus 105 l~~-i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-----a~~~~~l~~ 175 (487)
+|. +.+|+|.|..++|++.+++.+++.++++++|+++||+||||+++.+.++..++.+.. +. .+|++.+++
T Consensus 38 l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (392)
T PRK12382 38 IPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVV 117 (392)
T ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHH
Confidence 454 678999999999999999999999999999999999999999999988777655432 22 368899999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
+|+++|++.+...+...+++.|++|+|+|++++++.+.+...|..+||++++.+.+.+|||+.+.+..+..++.... ..
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~ 196 (392)
T PRK12382 118 GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NG 196 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HH
Confidence 99999999999999999999999999999999999999999999999999999999899999877665443322211 11
Q ss_pred ccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHH
Q 011369 256 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 335 (487)
Q Consensus 256 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (487)
..||. +++++++ .+.+ +..+... .+.+.
T Consensus 197 ~~~~~-----~~~~~~~-----------------------------------------~~~~---~~~~~~~-~~~~~-- 224 (392)
T PRK12382 197 TVRKV-----PAHAGER-----------------------------------------PSLW---SVVGLIW-KPGLG-- 224 (392)
T ss_pred hccCC-----CCCcccC-----------------------------------------chHH---HHHHHHH-HhHHH--
Confidence 11211 0000000 0000 0111111 11111
Q ss_pred HHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH
Q 011369 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (487)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (487)
.++..........+.|.|+++ .+.+... .......++.+++.+..|++.||+++| +.+..+..+..+..+
T Consensus 225 ---~~l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~ 294 (392)
T PRK12382 225 ---LALQGVGFAVIGTFVSLYFAS-KGWAMAG-FTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLL 294 (392)
T ss_pred ---HHHHHHHHhHHHHHHHHHHHh-cCCchhH-HHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHH
Confidence 111222233344556666655 3443322 222334566678889999999999988 455555555555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 416 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.....++.+..++..++.+++.+...+.......+..|+++|+++.|+. .....+|..++|.+.|++.|+
T Consensus 295 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~ig~~~~g~l~~~ 364 (392)
T PRK12382 295 LLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGY-AAFQDIAYGVSGPLAGMLATS 364 (392)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555666677777666666666677888889999999997 556667888999999988774
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=4.6e-31 Score=249.64 Aligned_cols=325 Identities=14% Similarity=0.042 Sum_probs=237.2
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+|.+++|+|.+..+.+++.+++.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.|+
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~ 99 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGV 99 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHH
Confidence 56799999999999999999999999999999999999999999999999999988888877 78899999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc--chHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
+.+...+....++.|++| ++|++++++++.+..+|..+++.+++.+.++. +||+.|.+.+++.++... ...|+.
T Consensus 100 g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~ 175 (355)
T TIGR00896 100 GIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIPQV 175 (355)
T ss_pred HHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhhh
Confidence 999988888889999987 68999999999999999999999998887664 399999887765433322 222432
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
+++. ++.+.. . ....++++|+|.++...+..+
T Consensus 176 ~~~~---~~~~~~----------------------------------------~-----~~~~~~~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 176 RRRV---AANQTT----------------------------------------T-----RLTPVRIWRSPLAWQVTVFFG 207 (355)
T ss_pred cccc---CCCCCC----------------------------------------C-----CCCCchhhcCHhHHHHHHHHH
Confidence 1110 000000 0 001234567787777666666
Q ss_pred HHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (487)
+....++....|+|.|+++ .+.+.... ...+...++.++++++.|++.||+++|+ ..+.++..+..++.+....
T Consensus 208 ~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~~ 282 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGLLF 282 (355)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHHHH
Confidence 6666666777889999987 57765555 5556677889999999999999996542 3444444444444433333
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-CCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
..+..... ...+.+++.+..++.......+..+ ++.++...++. .....++.+++|.+.|++.|++
T Consensus 283 ~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 283 APMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMA-QSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred hhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 33222222 3455677776666655444444444 46778888886 5556667778999999998753
No 61
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.3e-30 Score=250.83 Aligned_cols=327 Identities=19% Similarity=0.158 Sum_probs=236.2
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.++++++++++.+++.|+++|+
T Consensus 27 p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (401)
T PRK11043 27 PAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAV 106 (401)
T ss_pred hhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 44588999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
+.+...+....++.|++|++++++..+.......+|..++|.+++.+.++++||+.|++.+++.++..+..++..|+. +
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 185 (401)
T PRK11043 107 GVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSK-K 185 (401)
T ss_pred hhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCC-C
Confidence 998888888899999999999999999999999999999999999999999999999999888777666555443321 1
Q ss_pred CCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (487)
+++++. ...++++++++|.++...+.....
T Consensus 186 -----~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 215 (401)
T PRK11043 186 -----ARKQSQ---------------------------------------------DALTFKQLLKSKTYLGNVLIFAAC 215 (401)
T ss_pred -----ccccch---------------------------------------------HHHHHHHHHcChhHHHHHHHHHHH
Confidence 000000 002345566777766555444444
Q ss_pred Hhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH--
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 419 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 419 (487)
......+..+.|.++++ .+.+.... .......++.+++.++.+++.||+++|+.. +.......+..........
T Consensus 216 ~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 292 (401)
T PRK11043 216 SAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASLLS 292 (401)
T ss_pred HHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 44445556677888765 57775544 322334456677888889999999877321 1111222222221111111
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
.++.+..+....+.+++.+..++.......+.. ++.++++.|+.+ ..+..++..++.+.|.+.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~-~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 293 HPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQN-TLQLGLCFLASLLVSALIS 356 (401)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHH-HHHHHHHHHHHHHHHHccC
Confidence 123333444455666666766666655555555 467999999974 4555566677777777765
No 62
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=6.2e-31 Score=250.91 Aligned_cols=339 Identities=17% Similarity=0.173 Sum_probs=237.2
Q ss_pred hHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCC
Q 011369 67 LVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP 146 (487)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr 146 (487)
+..+++..++...+...+.. .+|.+.+++|.|..+.|++.+.+.++..+++++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~-----------------~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~ 70 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNT-----------------LVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGF 70 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHH-----------------HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 44444555555555555543 3489999999999999999999999999999999999999999
Q ss_pred CeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHH
Q 011369 147 FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (487)
Q Consensus 147 r~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 226 (487)
|+++..+.++.+++.+++++++|++.++++|+++|++.+...+.....+.+..++++|+++++++..+.++|..+|+.++
T Consensus 71 k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 150 (381)
T PRK03633 71 NRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLV 150 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred HhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhcc
Q 011369 227 GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 306 (487)
Q Consensus 227 ~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (487)
+.+.+...|+..+. .+........+.+...+++ ++++ ++.
T Consensus 151 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~-~~~--------------------------------- 190 (381)
T PRK03633 151 SKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ-----QAEN-HDS--------------------------------- 190 (381)
T ss_pred hcccccccchHHHH-HHHHHHHHHHHHHhcccCC-----CCCC-CCC---------------------------------
Confidence 99887543333322 2222111111111111110 0000 000
Q ss_pred ccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhh
Q 011369 307 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISG 385 (487)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 385 (487)
++.++.+++|.++......+...........++|.|+++ .+.+.... .+.++..++.+++++..
T Consensus 191 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~ 255 (381)
T PRK03633 191 --------------TSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPI 255 (381)
T ss_pred --------------CCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 012334566666654443344433444455678888876 46665444 44456667888999999
Q ss_pred hhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHH
Q 011369 386 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 465 (487)
Q Consensus 386 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~ 465 (487)
+++.||+++| +.+..+..+..+..+... .. ........+.+.+.....+.....+.+..|+++++...+..
T Consensus 256 g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~- 326 (381)
T PRK03633 256 GRLADRFGRL-----LVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQAL- 326 (381)
T ss_pred HHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHH-
Confidence 9999999998 555555554444433332 11 12222333444444455666666677888777777777775
Q ss_pred HHHHhhcCCCccceeeeeecc
Q 011369 466 VSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 466 ~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.....+|.++||.+.|++.|+
T Consensus 327 ~~~~~lG~~igp~~~G~l~~~ 347 (381)
T PRK03633 327 LLSYTVGSLLGPSFTAMLMQN 347 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 456777889999999998775
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.4e-30 Score=248.19 Aligned_cols=267 Identities=15% Similarity=0.127 Sum_probs=207.0
Q ss_pred CCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 011369 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 104 ~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g 183 (487)
++|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||++++++.++..++.+++..++|++.+++.|+++|++
T Consensus 25 ~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~ 104 (392)
T PRK10473 25 GLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIG 104 (392)
T ss_pred hHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCC
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (487)
.+...+....++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.++..||+.++
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999999999999999999999999988888999999999988877777766666653211
Q ss_pred CCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHH
Q 011369 264 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (487)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (487)
. ++.+.. ..+..++.++++.++...+...+..
T Consensus 185 ~---~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (392)
T PRK10473 185 R---APAASS---------------------------------------------KPRENSESLLNRFFLSRLVITTLSV 216 (392)
T ss_pred c---cCCccc---------------------------------------------hHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 1 000000 0012234456666655444443333
Q ss_pred hhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 011369 344 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 422 (487)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (487)
.....+..+.|.++++..|.+.... .......++.+++.++.+++.||+++| +.+..+..+..+..+......+
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 291 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPS 291 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333345566777777777776554 444556778889999999999999988 5666555555554444444333
Q ss_pred H
Q 011369 423 L 423 (487)
Q Consensus 423 ~ 423 (487)
.
T Consensus 292 ~ 292 (392)
T PRK10473 292 H 292 (392)
T ss_pred H
Confidence 3
No 64
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.97 E-value=8.4e-31 Score=253.14 Aligned_cols=327 Identities=13% Similarity=0.121 Sum_probs=237.8
Q ss_pred CCccccccccCccc-----cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011369 105 GSGIQGDFKLNNFQ-----DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (487)
Q Consensus 105 l~~i~~~~~~s~~~-----~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (487)
+|.+.+++|.+..+ .+++.+++.++..++++++|+++||+|||++++.+.++.+++.++++++++++.+++.|++
T Consensus 37 l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (408)
T PRK09874 37 LPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRAL 116 (408)
T ss_pred HHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 48888899988665 4888999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
.|++.+ ..+....++.|++|+++|++++++...+..+|..+++.+++.+.+..+||+.|++.+++.++..+..++..||
T Consensus 117 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (408)
T PRK09874 117 LGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRE 195 (408)
T ss_pred HHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999865 5677888999999999999999999999999999999999999998999999999998877776666666555
Q ss_pred ccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHH-HH
Q 011369 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-LG 338 (487)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 338 (487)
..+..++ ++. .+ .++..+.++++.++... ..
T Consensus 196 ~~~~~~~---~~~-----------------------------------------~~----~~~~~~~~~~~~~~~~~~~~ 227 (408)
T PRK09874 196 NFQPVSK---KEM-----------------------------------------LH----MREVVTSLKNPKLVLSLFVT 227 (408)
T ss_pred Ccccccc---hhh-----------------------------------------hH----HHHHHHhCcCCchHHHHHHH
Confidence 3211000 000 00 01112234555544322 22
Q ss_pred HHHHHhhheeeeecccceeeecccccccc---e-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHH
Q 011369 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 414 (487)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 414 (487)
.+...........++|.|..+..+..... . .+..+..++.+++.+..|++.||+++| +.+..+..+..+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~ 302 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLL 302 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHH
Confidence 22233333334455666666543322111 1 222334566778888899999999998 55555555555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 415 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+.....++.+...+..++.+++.+...+.......+..+++.+|+..++. .....+|..+||.+.|++.|.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~g~~~gp~~~G~l~~~ 373 (408)
T PRK09874 303 IPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYN-QSFRDIGNVTGPLMGAAISAN 373 (408)
T ss_pred HHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHH-HHHHHHHHHhhHHHHHHHHhh
Confidence 44444445555555666677777776666666667778889999999996 666777889999999988764
No 65
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=2.5e-30 Score=246.83 Aligned_cols=325 Identities=14% Similarity=0.094 Sum_probs=225.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
+.+.+|++.++.+.+++.+.+.+++.++++++|+++||+|||++++++.++.++++++++++++. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 55678999999999999999999999999999999999999999999999999999888877664 789999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (487)
...|+..+++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+...++. ++..+..||.+.+..
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~ 181 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRP 181 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999885 4888887776554433 333444565321110
Q ss_pred CCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhh
Q 011369 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (487)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (487)
+.+.+.. ...++..+..+.++++|.+........+....
T Consensus 182 ~~~~~~~-----------------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 220 (393)
T PRK11195 182 GQSWNPI-----------------------------------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGA 220 (393)
T ss_pred ccCCCHH-----------------------------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 0000000 00111122345566777665544443333333
Q ss_pred heeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (487)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (487)
.....+..|.|+++.++.++... .......++.+++.+..+++.||.+++ +.+..+.... ...+.....++.+
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~-~~~~~~~~~~~~~ 294 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMG-LVVLLMALQHSLL 294 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHH-HHHHHHHHHhHHH
Confidence 33444555667777778776665 444555677778888888888876665 4444443332 2222233344455
Q ss_pred HHHHHHHHHHHHHhccCCCeeEEEEeecCCCc-hhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 425 GFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
......++.+++.+...++......+..|++. +|++.++. .....++..++..+.+.+
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~-~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQ-NFNENLAMLLMLGLYSLL 353 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 45556667777777666666666666544444 79999986 556666766666665543
No 66
>PRK10054 putative transporter; Provisional
Probab=99.96 E-value=4.9e-30 Score=245.04 Aligned_cols=325 Identities=16% Similarity=0.105 Sum_probs=239.4
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
+.+++++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.++++|++.++++|++.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCC
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 265 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 265 (487)
...+....+..|.+|+++|++++++.....++|..++|++++.+.. .+||.+|++.+++.++..++..+..|+..++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~- 189 (395)
T PRK10054 112 VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAI- 189 (395)
T ss_pred HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccc-
Confidence 8888899999999999999999999999999999999999998875 79999999988877766555555455422110
Q ss_pred CCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhh
Q 011369 266 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 345 (487)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (487)
++++. +. .+.++.+++|.++...+..++....
T Consensus 190 ---~~~~~----------------------------------------~~-----~~~~~~~~~~~~~~~~~~~~l~~~~ 221 (395)
T PRK10054 190 ---ATETG----------------------------------------SV-----WSPSVLLQDKALLWFTCSGFLASFV 221 (395)
T ss_pred ---ccchh----------------------------------------hh-----hhhhhhccCceehHHHHHHHHHHHH
Confidence 00000 00 1124567888888777666665555
Q ss_pred heeeeecccceeeec--ccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH-HH
Q 011369 346 IGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LS 421 (487)
Q Consensus 346 ~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 421 (487)
...+..+.+.|.... .+.+.... .+.....+.........+++.||.++| +.+..+..+..+....... .+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~ 296 (395)
T PRK10054 222 SGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGN 296 (395)
T ss_pred HHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcch
Confidence 544445556655332 22232222 233334445555667778889998887 5555555444444433332 23
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
+.+...+...+.+++.....+.....+.+..|++.++++.+.. . ...+|..+||.++|++.|++
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~-~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 297 SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQ-S-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHH-H-HHHHHHHHHHHHHHHHHHHc
Confidence 4444555666777776666666666777788889999998874 3 45568899999999998863
No 67
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.96 E-value=6.2e-30 Score=242.02 Aligned_cols=303 Identities=21% Similarity=0.313 Sum_probs=262.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+.++.++..++.++..++++++.+++.|++.|++.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~ 101 (352)
T cd06174 22 LPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGG 101 (352)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHccc
Confidence 37788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
+...+...+++.|++|+|+|++.+++......+|..+++.+++.+.+..+||+.|++.+++.++..+...+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 174 (352)
T cd06174 102 GALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL------- 174 (352)
T ss_pred ccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 9999999999999999999999999999999999999999999999988999999999888776665544331
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
|.++...+..+....
T Consensus 175 -----------------------------------------------------------------~~~~~~~~~~~~~~~ 189 (352)
T cd06174 175 -----------------------------------------------------------------RLLLLLALAFFLLSF 189 (352)
T ss_pred -----------------------------------------------------------------HHHHHHHHHHHHHHh
Confidence 334555566666666
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhH-HHHHHHHHHHHHHHHHHHHHH
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLSS 422 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 422 (487)
.......+.|.+.++..+.+..+. .......++..++.++.+++.||+++| + .+..+..+..+..+.....++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~ 264 (352)
T cd06174 190 GYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAPS 264 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhcc
Confidence 677777888888888767666555 555677788899999999999999998 6 677777777777766666666
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 423 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
.+...+..++.+++.+...+....+..+..|+++|++..|+. .....+|..++|.+.|.+.|
T Consensus 265 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 265 LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLF-NTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhc
Confidence 777778888889999988999999999999999999999997 66777788899999988775
No 68
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.96 E-value=7.7e-31 Score=252.30 Aligned_cols=329 Identities=14% Similarity=0.062 Sum_probs=230.2
Q ss_pred Cccccccc--cCccccchhhhH-----HHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHH-------
Q 011369 106 SGIQGDFK--LNNFQDGVLSSA-----FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW------- 171 (487)
Q Consensus 106 ~~i~~~~~--~s~~~~~~~~s~-----~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~------- 171 (487)
+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||++++++.++..++.++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T TIGR00883 17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAP 96 (394)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Confidence 44444433 445556665543 3333457899999999999999999999999999999999999875
Q ss_pred -HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc--------cccchHHHHHHH
Q 011369 172 -SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGE 242 (487)
Q Consensus 172 -~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~ 242 (487)
.+++.|+++|++.+...+....++.|++|+++|++..++.+.+..+|.+++++++..+. +.++||+.|++.
T Consensus 97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 176 (394)
T TIGR00883 97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVS 176 (394)
T ss_pred HHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999998876653 357899999988
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHH
Q 011369 243 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 322 (487)
Q Consensus 243 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (487)
+++.++..+. ....||+++...++++.+ +. ..+
T Consensus 177 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------------------------------------~~----~~~ 209 (394)
T TIGR00883 177 AVLVLIGLYL-RRNLEETPVFEKAQEKHK------------------------------------------KK----RGP 209 (394)
T ss_pred HHHHHHHHHH-HHhcCCChhHHHHHhccc------------------------------------------cc----cCC
Confidence 7665443332 222333211100000000 00 011
Q ss_pred HHhhhcchh--HHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhh
Q 011369 323 TKVLLQEKV--YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 399 (487)
Q Consensus 323 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 399 (487)
.++.++++. ++......+...........+.|.|+++..+.+.... ....+..++..++.++.+++.||++||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~---- 285 (394)
T TIGR00883 210 IRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR---- 285 (394)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH----
Confidence 222333333 5555556666666666677788999977777776554 444556678889999999999999988
Q ss_pred hHHHHHHHHHHHHHH-HHH-HHH--HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCC
Q 011369 400 FKLLSAATFLGAISC-LTA-FCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 400 ~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
+.+.....+..... ... ... .+.+......++.+++.+...++....+.+.+|++.|+++.++.....+..|..+
T Consensus 286 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~ 364 (394)
T TIGR00883 286 -PVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGF 364 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhH
Confidence 44443333222222 111 111 2344445555666777777777788888999999999999998545667778889
Q ss_pred ccceeeeeecc
Q 011369 476 SSPLVGVLQVC 486 (487)
Q Consensus 476 ~p~~~g~l~~~ 486 (487)
+|.+.|++.|+
T Consensus 365 ~p~~~g~l~~~ 375 (394)
T TIGR00883 365 APYIAAALVAM 375 (394)
T ss_pred HHHHHHHHHHH
Confidence 99999998775
No 69
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=3.1e-30 Score=245.91 Aligned_cols=326 Identities=12% Similarity=0.009 Sum_probs=249.6
Q ss_pred CCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEe----hhHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011369 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRML 179 (487)
Q Consensus 104 ~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (487)
.+|.+.+|+|.|..++|++.+++.+...++++++|+++||+|||+.. .++..+..+ ..+..+++++.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l 103 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGL 103 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHH
Confidence 34788899999999999999999999999999999999999985432 222222222 244578899999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
+|.+.+...|...++..++ +++|+++.+......++|.+++|++++.+.+++|||..|++.++... ..++.++..|+
T Consensus 104 ~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~ 180 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPT 180 (382)
T ss_pred HHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCC
Confidence 9999988889988888765 46889999999999999999999999999999999999998766532 22233333232
Q ss_pred ccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHH
Q 011369 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (487)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (487)
.+++ +++++++. +..++.++++|+|+++...+..
T Consensus 181 ~~~~-~~~~~~~~---------------------------------------------~~~~~~~~~l~~~~~~~~l~~~ 214 (382)
T TIGR00902 181 IPPK-DAIPEDES---------------------------------------------QGDSAFIALLKNPMNLRFLAAV 214 (382)
T ss_pred CCCC-cccccccc---------------------------------------------ccchhHHHHHcChHHHHHHHHH
Confidence 1111 00000000 0012355678999999988888
Q ss_pred HHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q 011369 340 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (487)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (487)
++...+...+..+.|.|+++ .|.+.... ....+..++.+++.+..+++.||++.| +.+.++.+...+......
T Consensus 215 ~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~~ 288 (382)
T TIGR00902 215 CLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAIIG 288 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHHH
Confidence 88788888888899999987 67776555 444455577777888888888998887 777777777777777766
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 419 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
..++.+..+...++.++..+...+....++.+. |+++++++.++++.....+|.+++|.+.|++.|++
T Consensus 289 ~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 289 AIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 677778788888899998888888888788777 88899999999755667788899999999998863
No 70
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=9.5e-29 Score=236.64 Aligned_cols=322 Identities=10% Similarity=0.069 Sum_probs=209.9
Q ss_pred CccccccccCccccchhhhHHHH-HHHHHHHHHHHhhhhcCCCeEe-hhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g 183 (487)
+.+.+|+|.+++++|++.+...+ +..++.+++++ +||+||||.+ +.+.++.+++..+.+++++++.+++.+.+.|..
T Consensus 40 ~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 118 (393)
T PRK15011 40 IFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSF 118 (393)
T ss_pred HHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44788999999999999876655 66666655665 9999999875 455666677888888999999987766665555
Q ss_pred hhhhhhhhhhhhhhcCCCCch--hHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 184 EASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
.+...|....++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.++..++..+..++..||.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 567788888999998876655 345678889999999999999999999999999999999888877777666666642
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (487)
++.++ .++.. + ..++ +++..+........
T Consensus 199 ~~~~~--~~~~~----------------------------------------~-------~~~~--~~~~~~~~~~~~~~ 227 (393)
T PRK15011 199 KELPL--ATGTL----------------------------------------E-------APRR--NRRDTLLLFVICTL 227 (393)
T ss_pred CCCcc--ccccc----------------------------------------c-------cccc--ccccHHHHHHHHHH
Confidence 21100 00000 0 0000 00111222222222
Q ss_pred HHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q 011369 342 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (487)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (487)
.......+..+.|.|+++.++.+.... .+.....+..+++.++.|+++||+++| +.+..+..............
T Consensus 228 ~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~ 302 (393)
T PRK15011 228 MWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMA 302 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHH
Confidence 333334445678888887778776554 333444466677889999999999998 44444433333333222233
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
++.+..++..++.++..+...+....+..+.. |+.++++.++.+. ...+|..++|.+.|++.|+
T Consensus 303 ~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~~~~~~~~-~~~lg~~~g~~l~G~i~~~ 366 (393)
T PRK15011 303 HSPAILLGLQLLNAIYIGILGGIGMLYFQDLM-PGQAGSATTLYTN-TSRVGWIIAGSLAGIVAEI 366 (393)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcchHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 44444443333333333333332333334445 4569999999744 5567888999999988774
No 71
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.2e-28 Score=237.55 Aligned_cols=374 Identities=14% Similarity=0.104 Sum_probs=279.9
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHH-HHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAIC-RMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~-r~l~G~g~ 184 (487)
+.++++++.+.++++|+.++......+..++.+.+.||+|.|++.++|.++.+++.++.++++++|++++. -++.|+|.
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~ 149 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGL 149 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999988665 57789999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
|..+..+..++..||+ |+|+.+.|+...+.++|.++-|++...+.+.+|||+.+++.+.+.+-..+....+.|...+..
T Consensus 150 ~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~ 228 (509)
T KOG2504|consen 150 GLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKK 228 (509)
T ss_pred hhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCC
Confidence 9999999999998887 599999999999999999999999999999999999999999998888887777777544332
Q ss_pred CCCCcccchhhcccccCc-----ccCCCcccccccchhhhhhhhhccccccchhhhhhhhh-HHHHhhhcchhHHHHHHH
Q 011369 265 APAESGKAQVVASVSEGS-----EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS-QDTKVLLQEKVYVVNVLG 338 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 338 (487)
++.+++............ .....+....................++. ...+... .--.++++++.++...+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~ll~~~~fl~~~~~ 306 (509)
T KOG2504|consen 229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRN--SPLQAFLSMLDLSLLKDPKFLLLALS 306 (509)
T ss_pred chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccc--cchhhhhhhhhHHHHcCchHHHHHHH
Confidence 220000000000000000 00000000000000000000000000000 0000000 111467899999999999
Q ss_pred HHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHH
Q 011369 339 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 417 (487)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (487)
..+...++.....++|.|..+ .+++..+. ...++.++..++++++.|++.|+...++. .+..++.++..+..+..
T Consensus 307 ~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~gl~~~~~ 382 (509)
T KOG2504|consen 307 NLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIAGLARLFL 382 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHHHHHHHHH
Confidence 999999999999999999996 56665555 77788899999999999999999885432 45566666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 418 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
....+.+.++....++|++.+...........+.++.+.-..+.|+. ...+.++..+||.+.|++.|.+
T Consensus 383 p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~-l~~~gi~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 383 PFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLL-LLFQGIGALVGPPIAGLLYDIT 451 (509)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHH-HHHhHHHHHcCcccceeeeecc
Confidence 67777888888888888888877666667888899889999999997 7788889999999999998864
No 72
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1e-27 Score=236.60 Aligned_cols=340 Identities=14% Similarity=0.165 Sum_probs=239.3
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 011369 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID 196 (487)
Q Consensus 117 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 196 (487)
.+.+|+.+.+.++..++++++|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|......+.+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhh
Q 011369 197 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 275 (487)
Q Consensus 197 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 275 (487)
|..|++.||...+..+....+|..++..++....+. ++||..+.+..+++++..+. .++.||++++..+..+.++...
T Consensus 169 Eiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~ 247 (513)
T KOG0254|consen 169 EIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKR 247 (513)
T ss_pred hcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHH
Confidence 999999999999999999999999997666655443 58999999999998888888 7777887776544222221111
Q ss_pred ccc-ccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeeccc
Q 011369 276 ASV-SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 354 (487)
Q Consensus 276 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 354 (487)
... ..... ..+.+++.+........+.... ... ....+... +..+++.++...+..+.+..+.....+|.+
T Consensus 248 ~l~~l~g~~-~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~l~~---~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~ 319 (513)
T KOG0254|consen 248 SLKRLRGLS-PEDVEVELELLKIKLLVEAEVA--EGK--ASWGELFS---PKVRKRLIIGLLLQLFQQLTGINYVFYYST 319 (513)
T ss_pred HHHHHhCCC-CcchHHHHHHHHHHHHHhhhcc--ccc--ccHHHhcC---cchHHHHHHHHHHHHHHHHhCCceEEeehH
Confidence 100 00000 1111111111110000000000 000 00111111 234456667777888888889999999999
Q ss_pred ceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH------------H
Q 011369 355 KAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------S 422 (487)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 422 (487)
.+++.....++. .....+..+..+++.+++.++.||+||| ++++.+...+.++.++..... .
T Consensus 320 ~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~ 393 (513)
T KOG0254|consen 320 TIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGA 393 (513)
T ss_pred HHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccch
Confidence 998875544332 3333455677788888889999999999 777777777776665554321 1
Q ss_pred HHHHHHHHHHHHHHHhccCCCeeEE-EEeecCCCchhHHHHHHHHHHHhh
Q 011369 423 LYGFLALFTVGELLVFATQAPVNYV-CLHSVKPSLRALSMAISTVSIHIF 471 (487)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~g~~~~~~~~~ 471 (487)
.+..++..++....++..+.++.+. ..|.+|.+.|+.+.++.....+..
T Consensus 394 ~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~ 443 (513)
T KOG0254|consen 394 GWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLW 443 (513)
T ss_pred hHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHH
Confidence 2345555666666677777777764 466666699999999975444443
No 73
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=2.8e-28 Score=215.64 Aligned_cols=324 Identities=15% Similarity=0.030 Sum_probs=248.8
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
.++.+-+..++|++.+.+.+...+.+++.|.+.||+|+|..+++|+++....++++++.++++.++++|.+||+|.+...
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCC-chhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCC
Q 011369 189 SLAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 267 (487)
Q Consensus 189 ~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 267 (487)
+++.++++|.+|++ +|++++|+.-.+.++|..+||++||.+++..|.+.+|++.+++.++-..+.+++.+......+
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~-- 255 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD-- 255 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--
Confidence 99999999999975 479999999999999999999999999999999999999999999998888888744211110
Q ss_pred CcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhhe
Q 011369 268 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 347 (487)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (487)
+..+ -.++++++++|.++.........+....
T Consensus 256 ~~~~------------------------------------------------~~~~~~Ll~dP~I~~~agai~~~n~~la 287 (464)
T KOG3764|consen 256 STEQ------------------------------------------------GTPMWSLLMDPYILLIAGAITFSNSSLA 287 (464)
T ss_pred cccc------------------------------------------------CccHHHHHhCchHhhhhcchhhccchHH
Confidence 0000 0246678899998887777666666666
Q ss_pred eeeecccceeeeccccccccee-eeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHH---
Q 011369 348 AYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--- 423 (487)
Q Consensus 348 ~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 423 (487)
...-.++.++.+....+..... ......+...++..+.|.+.||++..+. .....+.......+......++.
T Consensus 288 fLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~w---l~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 288 FLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRW---LLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred HhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhH---HHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 6666667777776664443443 3334557889999999999999995421 34444444444444444444443
Q ss_pred HHHHHHHHHHHHHHhccCCCeeEEEEeecCCC---chhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 424 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+......++.+........+...+..+....+ .-|...++. .....+|.++||.++|.+.+.
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIa-d~a~sla~a~GP~~gg~iv~~ 429 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIA-DAAFSLAYAIGPTFGGSLVEA 429 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHH-HHHHHHhhhccccccchheee
Confidence 33334444444444455555555555555444 678889997 677888999999999998764
No 74
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=1.7e-28 Score=232.20 Aligned_cols=311 Identities=13% Similarity=0.070 Sum_probs=229.5
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-----CCCeE-ehhHHHHHHHHHHHhhcc---hhHHHH
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSI 173 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a---~~~~~l 173 (487)
+.+|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++.....++. .+++.+
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l 86 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLL 86 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHH
Confidence 34588999999999999999766 555555 99999999998 89987 567777777777777777 467778
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc--------hHHHHHHHHHH
Q 011369 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAIL 245 (487)
Q Consensus 174 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--------wr~~f~~~~~~ 245 (487)
....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.++.+ ||.+|++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~ 166 (356)
T TIGR00901 87 AGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALL 166 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHH
Confidence 8888889999999999999999999999999999999999999999999999999988888 99999999988
Q ss_pred HHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHh
Q 011369 246 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 325 (487)
Q Consensus 246 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (487)
.++..+..++..||+.+. ++++ +. ..++..+.+++
T Consensus 167 ~l~~~~~~~~~~~e~~~~--~~~~-~~------------------------------------------~~~~~~~~~~~ 201 (356)
T TIGR00901 167 ILPGLLVTLFLAKEPQED--ASVP-KP------------------------------------------LTQAVLKPIRE 201 (356)
T ss_pred HHHHHHHHHHhccCCCcc--cccc-hh------------------------------------------HHHHHHHHHHH
Confidence 777665555555552111 0000 00 00011123455
Q ss_pred hhcchh---HHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceee-cccchhhhhhhhhHhhhcccchhhh
Q 011369 326 LLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI-VCGIVGTISGGFILDQMGATISNAF 400 (487)
Q Consensus 326 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~ 400 (487)
++++|. ++...+..++..........+.|.|+++ .|.+..+. .+..+.. +..+++.++++++.||+|+|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~----- 275 (356)
T TIGR00901 202 FFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL----- 275 (356)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----
Confidence 566654 6666666666666677777888999887 77776554 3333333 56778999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHH
Q 011369 401 KLLSAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTV 466 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~ 466 (487)
+.+..+.++..+........ ++.+......++.+++.+..++....+..+..|+++||+..|+.+.
T Consensus 276 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 352 (356)
T TIGR00901 276 YALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSS 352 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHH
Confidence 55555555544444333222 2334455556677788888888899999999999999999999744
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=3e-29 Score=239.29 Aligned_cols=326 Identities=13% Similarity=0.020 Sum_probs=235.3
Q ss_pred CCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCC----eEehhHHHHHHHHHHHhhcchhHHHHHHHHHH
Q 011369 104 SGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRML 179 (487)
Q Consensus 104 ~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l 179 (487)
.+|.+.+|+|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. .......+++++.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l 103 (382)
T PRK11128 26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGL 103 (382)
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHH
Confidence 34778899999999999999999999999999999999999994 3332222222 22334456889999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
.|++.+...+...+++.++ +++|+++.+......++|..+||++++.+.+++|||..|++.++..++..+ ..+..||
T Consensus 104 ~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~ 180 (382)
T PRK11128 104 FNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPT 180 (382)
T ss_pred HHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCC
Confidence 9999998999888888877 357888899999999999999999999999999999999988765444333 2333343
Q ss_pred ccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHH
Q 011369 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (487)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (487)
..+. +++++.. ++..+++++++|+|.++...+..
T Consensus 181 ~~~~----~~~~~~~------------------------------------------~~~~~~~~~i~~~~~~~~~~~~~ 214 (382)
T PRK11128 181 IMPQ----GESRQQE------------------------------------------SAGWPAWKALLKEPTVWRFLLCV 214 (382)
T ss_pred CCCc----ccccccc------------------------------------------ccccchHHHHHcChhHHHHHHHH
Confidence 2110 0000000 00012456788999998887777
Q ss_pred HHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH
Q 011369 340 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 418 (487)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (487)
++..........+.|.|+++ .|.+.... .+..+..+..++..++.+++.||++++ +.+..+.+...+..+...
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~~ 288 (382)
T PRK11128 215 SLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLMG 288 (382)
T ss_pred HHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHH
Confidence 77666666667777888865 56665444 333445567777788888999999888 666666666666555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 419 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
..++.+..++..++.+++.+...+....+..+. +++++++..+..+...+..|..+||.+.|.+.|++
T Consensus 289 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 289 STTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566777677777777877776666666655554 56667888888654556677789999999998863
No 76
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.95 E-value=1.3e-28 Score=266.70 Aligned_cols=329 Identities=13% Similarity=0.009 Sum_probs=237.2
Q ss_pred ccccccccCc-cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehh---HHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 107 GIQGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 107 ~i~~~~~~s~-~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
.+.++.+.+. ...++..+++.+++.++++++|+++||+|||+++.. +.++..+..+.+...+|+++++++|+++|+
T Consensus 41 ~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi 120 (1140)
T PRK06814 41 GLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGI 120 (1140)
T ss_pred HhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3444444433 457888899999999999999999999999997533 223333333444445899999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
+.+...|+..+++.+++|+++|++++|+.+++.++|.++||++++++....+|++.|+..++..++. ++..+..|+...
T Consensus 121 ~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 199 (1140)
T PRK06814 121 HSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGN 199 (1140)
T ss_pred HHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999995554444443 333344444221
Q ss_pred CCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (487)
.....+ .+. ....+....++.+.+++.++...+..+..
T Consensus 200 ~~~~~~-~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1140)
T PRK06814 200 AAPDLK-IDR-----------------------------------------NIIRSTITLLKYAKADKRIWLAILGISWF 237 (1140)
T ss_pred CCCCCe-ecc-----------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 100000 000 00011224567778899999988887777
Q ss_pred Hhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH--
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 419 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 419 (487)
.+....+..++|.|+++.++.+.... .+.+...++.++|.++.|++.++..++ +.+..+.++..+..+.+..
T Consensus 238 ~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~ 312 (1140)
T PRK06814 238 WLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----LYVPIGALLMGLFGLDLAFAS 312 (1140)
T ss_pred HHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----eeehHHHHHHHHHHHHHHhcc
Confidence 77777777899999998888876655 555667788899999999999876655 2222222222222211111
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceee
Q 011369 420 ------------------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (487)
Q Consensus 420 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g 481 (487)
..+.+.+++..++.+++.+...++..+++.+..|++.+|+++|+. .+.+.+|..+++.+.|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~-~~~~~~~~~ig~~~~g 391 (1140)
T PRK06814 313 SSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAAN-NVLNAAFMVAGTIILA 391 (1140)
T ss_pred cccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHH-HHHHHHHHHHHHHHHH
Confidence 144555666677778888877778888999999999999999997 5567777788888877
Q ss_pred eee
Q 011369 482 VLQ 484 (487)
Q Consensus 482 ~l~ 484 (487)
.+.
T Consensus 392 ~l~ 394 (1140)
T PRK06814 392 LLQ 394 (1140)
T ss_pred HHH
Confidence 765
No 77
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4.6e-28 Score=216.01 Aligned_cols=326 Identities=16% Similarity=0.151 Sum_probs=271.2
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh---cchhHHHHHHHHHHhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVG 181 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~a~~~~~l~~~r~l~G 181 (487)
+|++++.|+++..|.+++..+++.++.+.+++.|++.+|+|+|+.+++|+.++++++.+.. ...++..++++-++.|
T Consensus 36 ip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila 115 (422)
T COG0738 36 IPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILA 115 (422)
T ss_pred HHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999999999999999999984 6678999999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-------------------cchHHHHHHH
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------------LNWRYAFWGE 242 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------------------~~wr~~f~~~ 242 (487)
.|.+...++++.++....++++-.+.+++.+..+++|.+++|++++.+..+ -.||++|.+.
T Consensus 116 ~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~ 195 (422)
T COG0738 116 SGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLIL 195 (422)
T ss_pred hhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHH
Confidence 999999999999999999998999999999999999999999999988762 2488899998
Q ss_pred HHHHHHHHHHHhhcc-ccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhH
Q 011369 243 AILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQ 321 (487)
Q Consensus 243 ~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (487)
+....+..+...... |+.... .++.. +..+ .
T Consensus 196 ~~~lvll~v~~~~~k~p~~~~~-----~~~~~-----------------------------------------~~~~--~ 227 (422)
T COG0738 196 AGLLVLLAVLILLSKLPDLQVA-----APSLG-----------------------------------------ASGS--A 227 (422)
T ss_pred HHHHHHHHHHHHhccCCcCCcc-----ccccc-----------------------------------------cccc--c
Confidence 887766666555443 331111 00000 0000 1
Q ss_pred HHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhh
Q 011369 322 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAF 400 (487)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 400 (487)
...+++++|.++...+..+++.........|++.|+.+..+.+..+. ...+..+.+.++|++++.++..|+...
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~----- 302 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE----- 302 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----
Confidence 35678899999999999999999999999999999999778777666 677788899999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcccee
Q 011369 401 KLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 480 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~ 480 (487)
+.+....++..+.++.....++.+ .+....+.+++.+..+|.+.....+.++ ++...+.++ ..+..+|+++-|++.
T Consensus 303 k~Laf~a~~~ill~~~~~l~~g~v-~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~--l~maivGGAiiP~l~ 378 (422)
T COG0738 303 KYLAFYALIAILLLLAVALIGGVV-ALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGL--LVMAIVGGAIIPPLQ 378 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChH-HHHHHHHHHHHhHHHHHHHHHHHHhccC-cccccccee--eeeheecchHHHHHH
Confidence 778877777777777777777744 4455667788899999999999999998 555566655 356777889999999
Q ss_pred eeeeccC
Q 011369 481 GVLQVCL 487 (487)
Q Consensus 481 g~l~~~~ 487 (487)
|++.|+.
T Consensus 379 G~i~d~~ 385 (422)
T COG0738 379 GVIADMF 385 (422)
T ss_pred HHHHHhh
Confidence 9998863
No 78
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=5.3e-28 Score=263.13 Aligned_cols=330 Identities=12% Similarity=0.026 Sum_probs=237.2
Q ss_pred CccccccccCc--cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hcchhHHHHHHHHHHh
Q 011369 106 SGIQGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i~~~~~~s~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a~~~~~l~~~r~l~ 180 (487)
+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..++.++. ..+++++.++++|+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 113 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLL 113 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 44555566543 347899999999999999999999999999999999887765555543 4457899999999999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc---------cchHHHHHHHHHHHHHHHH
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------~~wr~~f~~~~~~~~~~~~ 251 (487)
|++.+...++..+++.|++|+++|++++++...+..+|.++|+++++++... .+|++.+.+..+...+..+
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGL 193 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998865 2355555554444444444
Q ss_pred HHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchh
Q 011369 252 LAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV 331 (487)
Q Consensus 252 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (487)
+..+..|+.+......++.+.. ....+....++.+++++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~~ 233 (1146)
T PRK08633 194 IFAYRLPKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLRSDRV 233 (1146)
T ss_pred HHHhcCcCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHhcCcH
Confidence 4444445533221110000000 001122244566778888
Q ss_pred HHHHHHHHHHHHhhheeeeecccceeeeccccccc-ce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHH
Q 011369 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 409 (487)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 409 (487)
++...+..++.......+..++|.|+++.++.+.. .. .+.+...++.+++.++.+++.||++++ ..+.++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~ 308 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALG 308 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHH
Confidence 88777766666666666677889998888888765 44 444566677888999999999998877 455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceee
Q 011369 410 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (487)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g 481 (487)
.++..+++....+.+..++..++.+++.+...++...++.+..|++.||+++|+. .....+|.++++.+.+
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~-~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 309 LALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAAN-NFLQNVGMLLFLALTT 379 (1146)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHH-HHHHHHHHHHHHHHHH
Confidence 5555555555556666667777778888777777788888889999999999997 4455556555555544
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.95 E-value=1e-27 Score=234.63 Aligned_cols=328 Identities=13% Similarity=0.103 Sum_probs=223.8
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-----CCCeE-ehhHHHHHHHHHHHhhcc---hhHHHHHH
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAI 175 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~a---~~~~~l~~ 175 (487)
+|...++.|.+..+++.+ +.....+ ++.+++|+++||+ |||+. ++++.++.+++..++++. ++++.+.+
T Consensus 35 l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~ 112 (491)
T PRK11010 35 LQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAA 112 (491)
T ss_pred HHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHH
Confidence 377788889999899887 4444444 6899999999999 99986 667777777777777665 47889999
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHh
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++..+.+ ..|||.+|++.+++.++..+..+
T Consensus 113 ~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 113 LAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 57999999999988776655544
Q ss_pred hccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHH
Q 011369 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (487)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (487)
+ .||+++.. ++++.. + .+..+++++.++++..+.
T Consensus 193 ~-~~e~~~~~---~~~~~~----------------------------------------~--~~~~~~l~~~~~~~~~~~ 226 (491)
T PRK11010 193 L-APEPTDTI---PVPKTL----------------------------------------E--QAVVAPLRDFFGRNNAWL 226 (491)
T ss_pred h-cCCCcccc---ccccch----------------------------------------h--hhHHHHHHHHHcCcCHHH
Confidence 4 45532110 000000 0 000123445566666665
Q ss_pred HHHHHHHHHhhheeeeecccceeeecccccccce-eee-ceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHH
Q 011369 335 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 412 (487)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 412 (487)
..+..++..........+.+.|+.+..|.+..+. ... ....++.+++.+++|+++||+++| +.+....++.++
T Consensus 227 ~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~l 301 (491)
T PRK11010 227 ILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIFGILQGV 301 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHH
Confidence 5555455545544455667777766678877666 332 344568889999999999999987 444433333232
Q ss_pred HHHH---HHHH-HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 413 SCLT---AFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 413 ~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
..+. .... ++.+......++..++.+...+.......+..+++.+++..|+. +....+|.++++.+.|++.|.
T Consensus 302 ~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~-~s~~~lg~~~~~~~~G~l~~~ 378 (491)
T PRK11010 302 SNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALL-SALSAVGRVYVGPVAGWFVEA 378 (491)
T ss_pred HHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 2211 1111 23333333333323233333333455566677778889999987 445566767777788888774
No 80
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=7.4e-28 Score=211.69 Aligned_cols=342 Identities=13% Similarity=0.029 Sum_probs=221.3
Q ss_pred cCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 114 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 114 ~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
.+....|.+.|.|++...+.++.+|.++||+|||+++++|++..++...+.+.+.||..++++|++.|+..| ...+..+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence 445567999999999999999999999999999999999999999999999999999777778999999999 6677999
Q ss_pred hhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc---ccchHHHHHHHHH----HHHHHHHHHhhccccccCCCCC
Q 011369 194 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGEAI----LMLPFAVLAFVIKPLQLKGFAP 266 (487)
Q Consensus 194 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---~~~wr~~f~~~~~----~~~~~~~~~~~~~p~~~~~~~~ 266 (487)
+++|.+++|+|++.++.+....++|.++||.+|+++.. ..| +.+|..... +...-.....++.||+.+.+.+
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999999999999999999999999999999999987 222 222222222 2222123344455887654433
Q ss_pred CCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhh
Q 011369 267 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 346 (487)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (487)
.++..... + ...+++...... . .......++++..........+.+..+.+...+
T Consensus 223 ~~~~~~~~-~--------~~~~~~~~~~~~---~-------------~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~ 277 (451)
T KOG2615|consen 223 NDEHSTLQ-E--------AADDRLALLKFA---R-------------IFKVAALRNPPLLDFISVLRIFGLHYFLYLELF 277 (451)
T ss_pred cccccchh-h--------hhhhhhhhcchh---h-------------hhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 31111100 0 000000000000 0 000000011110000111222333444455555
Q ss_pred eeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 347 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 425 (487)
Q Consensus 347 ~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (487)
..+.++.+.+..+.+++++.+. .+.+..++. +.++.+.+..+..+.+......+......+.-..++.........
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~---m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~ 354 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQGKVLSTTGLL---MLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVV 354 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhheeeeehhhHH---HHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchh
Confidence 5555555656567788876555 444444444 444444444444443211113344444444444444444555566
Q ss_pred HHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 426 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+.....+..+......+.+..++....|+++||+.+|+. .....++-++||.+.|.+..+
T Consensus 355 l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~-~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 355 LYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIF-RSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred hhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHhhhhhhheeEEE
Confidence 677777777777788888888999999999999999997 777788889999999888754
No 81
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.3e-27 Score=220.36 Aligned_cols=334 Identities=15% Similarity=0.159 Sum_probs=226.7
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc---chhHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 011369 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFI 195 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~g~g~~~~~~~~~i 195 (487)
.+.+.+++.+|.++|++..|+++||+|||..+.++.++..++.++..+ ++++++++++|++.|+..|......+.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 467788999999999999999999999999999999888887776665 57899999999999999999999999999
Q ss_pred hhcCCCCchhHHHHHHHhhhhhhhhhHHHHHH--hhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccch
Q 011369 196 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 273 (487)
Q Consensus 196 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~--~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 273 (487)
.|..|++.||....+.+.+..+|.+++..++. .+.+.-.|++.+.+..+++++..+.. .+.||+|++.-..+.+++.
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALL-PFLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999987773 34455679999999988876665554 4558888765332111111
Q ss_pred hhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecc
Q 011369 274 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 353 (487)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (487)
.++.. +.....+++++..++..++.++++...... ....+.+++. -+|.+......+....+..+.+.+..|.
T Consensus 221 A~~sl-~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~----~sl~~~~~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Ys 293 (485)
T KOG0569|consen 221 ARKAL-KFYRGKEDVEAEIEEMLREIEEEELEKKKQ----ISLRQLLKNP--TLRRPLLIGIVVSFAQQFSGINAIFFYS 293 (485)
T ss_pred HHHHH-HHHhCCCcchhHHHHHHHHHHHhccccccC----CcHHHHhcCc--chhHHHHHHHHHHHHHHhcCcceeHHHH
Confidence 11100 111111111111111111111111110000 1111111111 1333444555566666777788888888
Q ss_pred cceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH----HHH--H--
Q 011369 354 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL--Y-- 424 (487)
Q Consensus 354 p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~-- 424 (487)
..++++ .|++...+ ......++...+.++++.++.||+||| ++++.+..++.+..+++... +.. |
T Consensus 294 t~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 294 TSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 888877 45666555 555667788899999999999999999 78877777777666554432 111 1
Q ss_pred -HHHHHHHHHHHHHhccCCCe-eEEEEeecCCCchhHHHHHHHH
Q 011369 425 -GFLALFTVGELLVFATQAPV-NYVCLHSVKPSLRALSMAISTV 466 (487)
Q Consensus 425 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~g~~~~ 466 (487)
..+++.++..++++.+.+++ ..+..|.+|++.|+.+.++...
T Consensus 368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~ 411 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATA 411 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHH
Confidence 23455566666667666666 4456666777999999998733
No 82
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=2.8e-26 Score=221.02 Aligned_cols=369 Identities=12% Similarity=0.060 Sum_probs=240.3
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
++.+.+|+|- .....|+.+...++.+++.++.|+++|.||||++++.+.++..+|+++++.++|...++++..+.|+|.
T Consensus 67 l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga 145 (599)
T PF06609_consen 67 LPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA 145 (599)
T ss_pred HHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh
Confidence 3778999995 468899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc-cccccCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI-KPLQLKG 263 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~-~p~~~~~ 263 (487)
|.... ....++|..|.|.|+...++...........++.++..+..+.+|||.|++..+...+.+++.+++ .|++.+.
T Consensus 146 G~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~ 224 (599)
T PF06609_consen 146 GVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQ 224 (599)
T ss_pred HHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhh
Confidence 86664 566689999999999888877777666667888888888877899999999998877665554433 3432211
Q ss_pred CCCCCcc-cchhhc-ccc---------------cCcccCCCcccccccchhhhhhhhhccccccchhhhhh--hhhHHHH
Q 011369 264 FAPAESG-KAQVVA-SVS---------------EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS--QFSQDTK 324 (487)
Q Consensus 264 ~~~~~~~-~~~~~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 324 (487)
.+.++.. ++..++ +.. -.........+............-.- ...-..++... +..--+.
T Consensus 225 ~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~-Lv~F~~wE~~~~~~~Pl~P~ 303 (599)
T PF06609_consen 225 LHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVL-LVAFVVWEWFGAPKDPLFPH 303 (599)
T ss_pred hccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHH-HHHHHHhhhhccCCCCcCCH
Confidence 1111111 110000 000 00000000000000000000000000 00000111111 1112234
Q ss_pred hhhcc-hhHHHHHHHHHHHHhhheeeeecccceeeeccccccc---ce-eeeceeecccchhhhhhhhhHhhhcccchhh
Q 011369 325 VLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA---DM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 399 (487)
Q Consensus 325 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 399 (487)
+++++ |.+...++..+.....++....+.|......++.+.. .. ........+..+|.++.+.+..++++-|
T Consensus 304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K--- 380 (599)
T PF06609_consen 304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIK--- 380 (599)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchh---
Confidence 57776 5566666676777777777777888877777766543 22 3334455667778888888888887553
Q ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcc
Q 011369 400 FKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
..++.+.++..+++..+.. .++....+.+.++.+++.+....+....+.-..|+++-+++.|+. ...+.+|+.+|.
T Consensus 381 -w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~-~s~R~~GGsIg~ 458 (599)
T PF06609_consen 381 -WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLT-GSIRSIGGSIGY 458 (599)
T ss_pred -HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHH-HHHHHHhhHHHH
Confidence 3444454444443333322 234444566677888888877777777778889999999999997 667777777766
Q ss_pred ceee
Q 011369 478 PLVG 481 (487)
Q Consensus 478 ~~~g 481 (487)
.+..
T Consensus 459 aIy~ 462 (599)
T PF06609_consen 459 AIYN 462 (599)
T ss_pred HHHH
Confidence 5544
No 83
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=1.9e-26 Score=213.19 Aligned_cols=345 Identities=10% Similarity=0.016 Sum_probs=233.2
Q ss_pred CccccccccCccc-cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQ-DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~-~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.+|+|+|+.| .|.+.++++.++++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++.
T Consensus 50 p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaE 129 (511)
T TIGR00806 50 PYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTM 129 (511)
T ss_pred HHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHH--HHHHHHHHHhhccccccC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI--LMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~--~~~~~~~~~~~~~p~~~~ 262 (487)
|... +...++..|+|+++|+++.++..++..+|.++++++++. ...+|||+.+.+.-+ .+..++++..+++|...+
T Consensus 130 A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 130 AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 9999 999999999999999999999999999999999999999 446799976555422 223333444444453222
Q ss_pred CC--CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 263 GF--APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 263 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
.. ++.++.+.. ...+.+.....+. . ...+ ..........+..+.+++...+|+.++.-.+-+.
T Consensus 208 sl~f~~~~~~~~~----~~~~~~~~~~~~~-------~---~~~~-~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa 272 (511)
T TIGR00806 208 SLFFNRLEDVRGA----LPCELDQMVPGPG-------G---KLED-YLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWV 272 (511)
T ss_pred hhhhccccccccc----cccccccCCCCCc-------c---ccch-hhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHH
Confidence 11 111000000 0000000000000 0 0000 0000011233556677888888888777777776
Q ss_pred HHHhhheeeeecccceeeeccccccc-ceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (487)
+...+++-+.+|....-++....++. .-..-++..+.+.+..+..|++-.++.+.. ...+.+..++.+..+++...
T Consensus 273 ~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~---~l~l~v~s~~~~gll~~m~~ 349 (511)
T TIGR00806 273 FNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWS---KLLIAVVSAIQAGLVFWMSQ 349 (511)
T ss_pred HHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH---HHHHHHHHHHHHHHhhhhhc
Confidence 66666666665554444333221111 112223444556667777777754442211 13444455555555566666
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHh
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (487)
.++.|...+...++...+....+....-++..+..+.-|...|++++..-.
T Consensus 350 t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~ 400 (511)
T TIGR00806 350 SHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATA 400 (511)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHH
Confidence 778888888888888888877777777777777777778888886443333
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.94 E-value=2.6e-27 Score=229.03 Aligned_cols=332 Identities=16% Similarity=0.056 Sum_probs=210.6
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh---cch-----hHHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSF-----DFWSIAICR 177 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~a~-----~~~~l~~~r 177 (487)
..+.+++|+++.+.|++.+++.++..++++++|+++||+|||++++++..+.+++..... .++ .+...++++
T Consensus 35 ~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (420)
T PRK09528 35 IWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGG 114 (420)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677999999999999999999999999999999999999999887666555433221 111 111122333
Q ss_pred HHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 178 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 178 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
++.|.+.....+....+..+. .+++++.++......++|..+++++++.+.+ .+|+++|++.+++.++..++.++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 191 (420)
T PRK09528 115 IYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAK 191 (420)
T ss_pred HHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhccc
Confidence 444433333333333333222 2467778899999999999999999998876 4899999999888777666655554
Q ss_pred ccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHH
Q 011369 258 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 337 (487)
Q Consensus 258 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (487)
|+++++....+++++ ++.+...++.++.+|+|.++...+
T Consensus 192 ~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~~l~~~~~~~l~l 230 (420)
T PRK09528 192 PDAPSTAKVANALGA-----------------------------------------NASAVSLKDALALLKLPKFWFLVL 230 (420)
T ss_pred ccccchhhhccchhc-----------------------------------------ccccccHHHHHHHccCCCeEeehH
Confidence 442111000000000 000000123445677887766555
Q ss_pred HHHHHHhhheeeeecccceeeecc---cccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHH
Q 011369 338 GYIAYNFVIGAYSYWGPKAGYNIY---HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (487)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (487)
..+...........+.|.|+.+.. +.+.... .+.++..+..+++.++.|++.||+++| +.+..+..+..+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~ 305 (420)
T PRK09528 231 YVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVR 305 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHH
Confidence 444443333334445666665433 2222222 333445566778999999999999998 6666655555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 414 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
..+....++.+..+....+.++..+...+....+..+..|++.+++..+...+....+|.+++|.+.|++.|.
T Consensus 306 ~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~ 378 (420)
T PRK09528 306 IIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS 378 (420)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh
Confidence 5555555566655555666666665555555667778888888888766532455667889999999998875
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=4.2e-27 Score=225.86 Aligned_cols=331 Identities=12% Similarity=0.031 Sum_probs=220.3
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hcc-----hhHHHHHHHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-----FDFWSIAICRM 178 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-----~~~~~l~~~r~ 178 (487)
.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+.++.++...+++.... .+. +.+..+++.|+
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGL 107 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3566799999999999999999999999999999999999999988777665544322 122 22344577789
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 179 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
+.|++.+...+....+..|..+ +++..++......++|..+|+++++.+.+ .+||++|++.+++.++..++.++..|
T Consensus 108 ~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 184 (396)
T TIGR00882 108 YLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKP 184 (396)
T ss_pred HHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999888888888888777543 34567788888889999999999998865 59999999998888777666555444
Q ss_pred cccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHH
Q 011369 259 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 338 (487)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (487)
+.+++ ++.++. .+ . ++..+..++.++++|+|.++...+.
T Consensus 185 ~~~~~----~~~~~~---~~------~----------------------------~~~~~~~~~~~~~l~~~~~~~~~l~ 223 (396)
T TIGR00882 185 KAPSS----ATVANA---LG------A----------------------------NASAFSLKLALELFRQRKFWMFVLY 223 (396)
T ss_pred CCchh----hhhhcc---cc------c----------------------------ccCCCCHHHHHHHHcCCcHHHHHHH
Confidence 42111 000000 00 0 0000001345667888888776666
Q ss_pred HHHHHhhheeeeecccceeeecc---cccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHH
Q 011369 339 YIAYNFVIGAYSYWGPKAGYNIY---HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 414 (487)
Q Consensus 339 ~~~~~~~~~~~~~~~p~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 414 (487)
.+.....+.....+.|.|+++.. +.+.... ...++..+..+++.+..+++.||+++| +.+.++..+..+..
T Consensus 224 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~~ 298 (396)
T TIGR00882 224 VVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVRI 298 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHH
Confidence 55544444444445666665543 2222222 233444566777888999999999998 66666665555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 415 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
......++.+..+...++.+.+..........+..+..+++.++++.+........+|.+++|.+.|++.|.
T Consensus 299 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~ 370 (396)
T TIGR00882 299 IGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS 370 (396)
T ss_pred HHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh
Confidence 444445555655555666665554433333444555667777777666633456777889999999998875
No 86
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.94 E-value=3.6e-30 Score=251.84 Aligned_cols=343 Identities=18% Similarity=0.218 Sum_probs=230.4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch---hHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 117 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
.+.+++.+...+|..+|++++|.++||+|||+.++++.++..+++++.++++ |++.+.++|+++|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3568899999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc---cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcc
Q 011369 194 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 270 (487)
Q Consensus 194 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 270 (487)
++.|..|+++|++..++.+.+..+|.+++..++..+... .+||..+++.++++++..+.. +..||+|++...+++.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRD 204 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccccc
Confidence 999999999999999999999999999998887665443 349999999998887655544 5568888776544433
Q ss_pred cchhhcccccCcccCC-CcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcc-----hhHHHHHHHHHHHHh
Q 011369 271 KAQVVASVSEGSEASN-LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE-----KVYVVNVLGYIAYNF 344 (487)
Q Consensus 271 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 344 (487)
++..+..+. ..+.+ .+++..+..++.+...+.+ ..+++++++ +.+....+..+....
T Consensus 205 ~~A~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~ 267 (451)
T PF00083_consen 205 EEAEKVLRK--LRGKEIEDEEIEEIKAEKKESQESK---------------ASWRDLFRNKKYRKRLLIALLLQFFQQFS 267 (451)
T ss_pred ccccccccc--ccccccccccccccccccccccccc---------------eeeeecccccccccccccccccccccccc
Confidence 322111111 11111 1111111111111000000 112222222 233333333333344
Q ss_pred hheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHH-----H
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----C 419 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 419 (487)
+......+.|.++++ .+.+.. .....+..+...++.+++.++.||+||| +.++.+....+++.+... .
T Consensus 268 g~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~ 340 (451)
T PF00083_consen 268 GINFIFYYSPSIFEN-AGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLG 340 (451)
T ss_pred ccccccccccccccc-cccccc-cccccccccccccccccccccccccccc-----cccccccccccccccccccccccc
Confidence 445566666766665 444433 3333455577778888888999999999 666666655555544432 1
Q ss_pred HHH----HHHHHHHHHHHHHHHhccCCCe-eEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 420 LSS----LYGFLALFTVGELLVFATQAPV-NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 420 ~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
.++ ....+.+..+.....+.++.+. ..+..|.+|++.|+++.|++ ...+.++++++|.+...+.+
T Consensus 341 ~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~-~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 341 VSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLS-YAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred cccccccccccceeeeeccccccccccccccccccccccccccccccccc-cccccccccccccccccccc
Confidence 122 2223333333434444444444 46678889889999999997 55666777888887766654
No 87
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=5.7e-26 Score=199.51 Aligned_cols=324 Identities=14% Similarity=0.069 Sum_probs=252.6
Q ss_pred cCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 103 TSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 103 p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.++++++|+|+|.+..|+++++..+..++.+++..+++.|+|.++.+..++++.+++.++-... +.+.++.+-.+.|.
T Consensus 33 PLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~ 111 (395)
T COG2807 33 PLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGA 111 (395)
T ss_pred hhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHh
Confidence 56799999999999999999999999999999999999999999999999999999999999887 88899999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
|.+...+..+.++.+.||+ +-+..+++|....++|..+++.+.-.+.++. +||....+-+.++++.+++.+ |...
T Consensus 112 gIav~nVLLPslIK~~Fpk-~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~ 187 (395)
T COG2807 112 GIAVINVLLPSLIKRDFPK-RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQAL 187 (395)
T ss_pred hHHHHHHhhhHHHHhhccc-chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhcc
Confidence 9999999999999999994 8899999999999999999999998888877 799999999888776655443 4322
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 341 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (487)
+++......+. .+-..++|+|.-|...+.+.+
T Consensus 188 r~~~~~~~~~~------------------------------------------------~~~~~vw~~~~aW~vtLfmGl 219 (395)
T COG2807 188 REQAASIATKL------------------------------------------------VSVRKVWRSPLAWQVTLFMGL 219 (395)
T ss_pred ccccccccccc------------------------------------------------ccccccccCchhHHHHHHHHh
Confidence 22111111110 112346899999999999999
Q ss_pred HHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH
Q 011369 342 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 420 (487)
Q Consensus 342 ~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (487)
+.+.+|....|+|.++.| .|++..+. .+.++..+..++..+....+.+|.+.++ +..+....+..+..+.+...
T Consensus 220 qS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 220 QSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred hHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999998 46776666 6667788899999999999999876654 33333333333333333222
Q ss_pred -HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCC-CchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 421 -SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 421 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
.+.+... .++.|++.+..++.....+.....+ +..+.-.|+.+...+.+ +..||.++|++.|.+
T Consensus 295 P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYll-Aa~GP~l~G~lhDa~ 360 (395)
T COG2807 295 PGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLL-AAFGPWLFGFLHDAT 360 (395)
T ss_pred hhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHH-HhhhhhhHhHHHHhc
Confidence 2222222 4677777788888777766666655 56666666654444444 458999999999864
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.93 E-value=3.7e-26 Score=221.52 Aligned_cols=328 Identities=16% Similarity=0.135 Sum_probs=251.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-----hhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~ 182 (487)
+..+..-|+..++++..+..+...+.++++|.++||++||++++.+-++..+..+..++. .+.+.+++.-++.|+
T Consensus 36 lv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~ 115 (524)
T PF05977_consen 36 LVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGI 115 (524)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHH
Confidence 455667788999999999999999999999999999999999999988876655544432 478999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
+.+...|+..+++.|.+|+++...++++.+...++..++||.++|.+....|-.++|.+.++..++..+....+.++..
T Consensus 116 ~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~- 194 (524)
T PF05977_consen 116 GSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPP- 194 (524)
T ss_pred HHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-
Confidence 9999999999999999999999999999999999999999999999999889999999998766554443333322210
Q ss_pred CCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 342 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (487)
+++..++ ....+....++.+.++|.+....+..+..
T Consensus 195 ---~~~~~~e-----------------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~ 230 (524)
T PF05977_consen 195 ---PSSLPRE-----------------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLF 230 (524)
T ss_pred ---ccccchh-----------------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHH
Confidence 0000000 11123334556666677766665555555
Q ss_pred Hhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 011369 343 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (487)
Q Consensus 343 ~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (487)
++....+...+|.+.++..+.+.... .+.+..++++++|.++.+++.+|++++ +++..+.+..++..+.+...+
T Consensus 231 ~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~ 305 (524)
T PF05977_consen 231 NLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSP 305 (524)
T ss_pred HHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcch
Confidence 55555556678999888888776666 555677788888888888877777766 566666666676666667777
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+.+...+.+++.|++.........+...+.+|++.||+++++. .+....+..+|..+.|.+.|+
T Consensus 306 ~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~-~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 306 SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIY-QMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 7787778888888888877777788889999999999999997 556666777888888887764
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.93 E-value=6.2e-26 Score=221.16 Aligned_cols=330 Identities=14% Similarity=0.097 Sum_probs=237.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCCe-EehhHHHHHHHHHHHhhcchh------HHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIA 174 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (487)
+.+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++...++ +..++
T Consensus 24 ~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 103 (437)
T TIGR00792 24 FFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAY 103 (437)
T ss_pred HHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 56778899999999999999999999999999999998 67744 677788888888887777654 46678
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcC-CCCchhHHHHHHHhhhhhhhhhHHHHHHhhc-------cccchHHHHHHHHHHH
Q 011369 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILM 246 (487)
Q Consensus 175 ~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~~wr~~f~~~~~~~ 246 (487)
+.+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||+.+++.+++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~ 183 (437)
T TIGR00792 104 ITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIG 183 (437)
T ss_pred HHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHH
Confidence 8889999999988888888999987 4689999999999888888877766655443 2468999999999988
Q ss_pred HHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhh
Q 011369 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (487)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (487)
++..++.++..||++++. +++++. ..+..+.++.+
T Consensus 184 ~~~~~~~~~~~~e~~~~~--~~~~~~-------------------------------------------~~~~~~~~~~l 218 (437)
T TIGR00792 184 VVSLIICFFGTKERYSEI--PKNIEK-------------------------------------------KLSLKQIFKAL 218 (437)
T ss_pred HHHHHHHHcCCEecCCCC--Cccccc-------------------------------------------CCCHHHHHHHH
Confidence 877776666666532110 000000 00112346677
Q ss_pred hcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHH
Q 011369 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (487)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (487)
+++|.++...+..++...+......+.+.|.+...+.+.....+..+..++.+++.++.+++.||+|+| +.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~ 293 (437)
T TIGR00792 219 FKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGG 293 (437)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHH
Confidence 889998888777777766666555566666666555332222344455688889999999999999988 566666
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-------CCchhHHHHHHHHHHHhhcCCCccc
Q 011369 407 TFLGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSP 478 (487)
Q Consensus 407 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~~p~ 478 (487)
..+.++..+..... ++.+..++..++.+++.+...+....+..+..+ ++.+|.+.|+. +....+|..+++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~~g~~lg~~ 372 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR-TFVRKLGQALAGF 372 (437)
T ss_pred HHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH-HHHHHHHHHHHHH
Confidence 55555544444332 344455555666667766666666666666543 46789999997 5567778889999
Q ss_pred eeeeeecc
Q 011369 479 LVGVLQVC 486 (487)
Q Consensus 479 ~~g~l~~~ 486 (487)
+.|++.|.
T Consensus 373 i~g~ll~~ 380 (437)
T TIGR00792 373 LVGLILGI 380 (437)
T ss_pred HHHHHHHH
Confidence 99888764
No 90
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.93 E-value=8.1e-26 Score=217.22 Aligned_cols=324 Identities=15% Similarity=0.076 Sum_probs=215.6
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-----CCCe-EehhHHHHHHHHHHHhhcc---hhHHHHHH
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIAI 175 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~a---~~~~~l~~ 175 (487)
+|.+-++.|+|.+++|++..+... .+..+++|+++||+ |||| .++++.++.+++..+.++. ++++.+++
T Consensus 22 ~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~ 99 (402)
T PRK11902 22 LQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAG 99 (402)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHH
Confidence 477888889999999999777765 59999999999999 8876 6888888888877777776 45788888
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHh
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
..++.++..+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+. .|||..|++.+++.++..+..
T Consensus 100 ~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~- 178 (402)
T PRK11902 100 LAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT- 178 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-
Confidence 888889999999999999999999999999999999999999999999999988885 599999999988776654443
Q ss_pred hccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHH
Q 011369 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (487)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (487)
+..||+++... + +++. .++..+++++++++|.++.
T Consensus 179 ~~~~e~~~~~~--~-~~~~------------------------------------------~~~~~~~~~~l~~~~~~~~ 213 (402)
T PRK11902 179 LWAPEPEVPAR--P-PRSL------------------------------------------GEAVVGPLRDFFSRRGAWA 213 (402)
T ss_pred HhcCCCccccc--c-cchh------------------------------------------HHHHHHHHHHHHhCcCHHH
Confidence 34455321100 0 0000 0011234667788888877
Q ss_pred HHHHHHHHHhhheeeeecccceeeecccccccce-eeecee-ecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHH
Q 011369 335 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 412 (487)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 412 (487)
..+..++..........+.+.++.+..|.++... .+.... .++.+++.++++++.||+++| +.+.....+..+
T Consensus 214 ~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~l 288 (402)
T PRK11902 214 LLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQAV 288 (402)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHH
Confidence 6665555443322222334445555567776555 222222 345788999999999999987 444444433333
Q ss_pred HHHHH---HHH-HHHHHHHHHHH----HHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 413 SCLTA---FCL-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 413 ~~~~~---~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
..+.. ... ++.+..+.... ..++..+........++.+..|.+.++ .. .....++.+.++.+.|++.
T Consensus 289 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~l~~~~~~~~~G~l~ 363 (402)
T PRK11902 289 SNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYA----LL-SALASVGRVYVGPTSGYLV 363 (402)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HH-HHHHHHHHHHHHHHHHHHH
Confidence 22221 122 23343333332 344445555555666777777655544 32 2223334443445677776
Q ss_pred cc
Q 011369 485 VC 486 (487)
Q Consensus 485 ~~ 486 (487)
|+
T Consensus 364 ~~ 365 (402)
T PRK11902 364 EA 365 (402)
T ss_pred HH
Confidence 64
No 91
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=1e-25 Score=223.90 Aligned_cols=345 Identities=14% Similarity=0.104 Sum_probs=233.3
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
.+.+..+.....+..+++++|..+|++++|+++||+|||+++++++++..++.++.++++|++.+++.|+++|++.+...
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~ 189 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPL 189 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchh
Confidence 35667788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCC
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 268 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 268 (487)
.....++.|++++++|+.+..+ ......+..++++.++++.. +||+.+++..+++++..+. ++++||++++...+.
T Consensus 190 ~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 190 TVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred HHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 9999999999999999999999 77777777888888888887 7999999999998877666 666678877654444
Q ss_pred cccchhhcccc-cCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHH----H
Q 011369 269 SGKAQVVASVS-EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY----N 343 (487)
Q Consensus 269 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 343 (487)
+.++..+..+. .+.. ....+..+...........+. ...+....+..+++.+++....+...+. .
T Consensus 266 ~~~~a~~~l~~~a~~n--~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ 335 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLN--GRKLSVKELLRLELLLRPLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFS 335 (521)
T ss_pred chHHHHHHHHHHHhhc--CCCCCcHHHHHHHHHhhHhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHHHh
Confidence 33222211111 0000 000000000000000000000 0000001233445554333332222222 2
Q ss_pred hhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 344 FVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 423 (487)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (487)
..+++..... .+ .+.+. .....+.+.....+....+...|++||| .....+..+..++++........
T Consensus 336 ~~y~gl~~~~----~~-lg~~~--~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~ 403 (521)
T KOG0255|consen 336 LVYYGLSLNV----SG-LGGNI--YLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDD 403 (521)
T ss_pred HHHHhhhhhh----hh-cCchH--HHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhcc
Confidence 2222222221 11 22221 1111222335566777778999999888 77777777777777666655432
Q ss_pred H---HHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcccee
Q 011369 424 Y---GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 480 (487)
Q Consensus 424 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~ 480 (487)
. ...+...+..++.+..+...+.+..+.+|+..|+.+.+.+ .....+|.+++|.+.
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~-~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 404 LGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAI-SAAARLGSILAPLFP 462 (521)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 2 3556666666777777777788899999999999999997 778888888888764
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.93 E-value=1.7e-25 Score=217.70 Aligned_cols=367 Identities=14% Similarity=0.052 Sum_probs=225.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHHHHHHHHHHHhhcchhHHH-HHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~-l~~~r~l~G~g 183 (487)
..+.+++|.+..+.+++.+.+.....+..+++|+++|| +||||+++++.+++.++.+.++++++... ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 45778899999999999999999999999999999999 99999999999999999999999877554 55899999999
Q ss_pred hhhhhhhhhhhhhhcCCCC--chhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 184 EASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
.|...+...+++.|.+|++ +|++++++++.+.++|..+||.+++++.+++|||+.|++.++ +++..++.++..++..
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMV 197 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhh
Confidence 9999999999999999877 457899999999999999999999999999999999999654 4444444444444432
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhcccccc-------chhhhhhhhhHHHHhhhcchhHHH
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES-------RFLNQLSQFSQDTKVLLQEKVYVV 334 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 334 (487)
++..++.++++.+.......... -..-................. .......+. ...++.+|+|.+..
T Consensus 198 ~~~~~~~~~~~~d~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~ 271 (489)
T PRK10207 198 KDIGSEPDHKPMSFSKLLLVLLG-----SVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVA 271 (489)
T ss_pred cccCCCCCccchhhhhHHHHHHH-----HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHH
Confidence 22111110100000000000000 000000000000000000000 000000000 00013445555443
Q ss_pred HHHH--HHHHHhhheeeeecccceeeecccccccce-----eeeceeecccchhhhhhhhhHhhhcccchh--hhHHHHH
Q 011369 335 NVLG--YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-----MFGGVTIVCGIVGTISGGFILDQMGATISN--AFKLLSA 405 (487)
Q Consensus 335 ~~~~--~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~--~~~~~~~ 405 (487)
..+. ....+..+....+.++.+.++..+.+.... .+..+..+..++..++.+++.||+++|+.. ....+.+
T Consensus 272 ~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~ 351 (489)
T PRK10207 272 FVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTL 351 (489)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHH
Confidence 3322 333344444444566666654222221111 111122244556777788999999888421 0012333
Q ss_pred HHHHHHHHHHHH-----HH-----HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCC
Q 011369 406 ATFLGAISCLTA-----FC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 406 ~~~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
+.++..++.+.. .. ..+.++.+...++.+++.....++....+.+..|++.+|.++|+. .....+|+.+
T Consensus 352 G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~-~l~~~ig~~l 430 (489)
T PRK10207 352 GMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW-FLTQAAAFLL 430 (489)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHH
Confidence 333333333211 11 123566677788889999999999999999999999999999996 5555556655
Q ss_pred cccee
Q 011369 476 SSPLV 480 (487)
Q Consensus 476 ~p~~~ 480 (487)
|..+.
T Consensus 431 g~~l~ 435 (489)
T PRK10207 431 GGYVA 435 (489)
T ss_pred HHHHH
Confidence 55443
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.93 E-value=5.8e-26 Score=218.23 Aligned_cols=323 Identities=11% Similarity=-0.004 Sum_probs=220.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCC-CeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+.+.+++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++..++..+..+.++++.+++.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 56778899999999999999999999999999999999965 77888888888888888999999999999999999988
Q ss_pred hhhhhhhhhhhh--------hcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 185 ASFISLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 185 g~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+...+...++.. |......|.+..| .+|.++|+.+++.+.....|+ +|++.++..++..++ .+.
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~ 178 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALT 178 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-Hhc
Confidence 777766655432 2222234555444 368888888888774433455 455666655554443 344
Q ss_pred cccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHH
Q 011369 257 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 336 (487)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (487)
.||.++...+++ ... + .....+.+.++|+|.++...
T Consensus 179 ~~e~~~~~~~~~--~~~----------------------------------------~--~~~~~~~~~~~k~~~~~~~~ 214 (418)
T TIGR00889 179 LPDIPVAKSTAK--MSI----------------------------------------K--VMLGLDAFILFKNKRMAIFF 214 (418)
T ss_pred CCCCCCCccccc--cCH----------------------------------------H--HHhhhhHHHHhcCCCeeeHH
Confidence 465321100000 000 0 00001234567888877776
Q ss_pred HHHHHHHhhheeeeecccceeeecccccc--------cce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHH
Q 011369 337 LGYIAYNFVIGAYSYWGPKAGYNIYHMSN--------ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 407 (487)
Q Consensus 337 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 407 (487)
+..++..........+.|.++++. +.++ ... ...++..+..+++.+..+++.||+|+| +.+..+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~~ 288 (418)
T TIGR00889 215 FFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLSL 288 (418)
T ss_pred HHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence 666665554444456667777653 3221 122 333455567788899999999999998 6777776
Q ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 408 FLGAISCLTAFCLS----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 408 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
++..+......... +.+.+++..++.+++.+...+....++.+..|++.|+++.|+.+...+.+|.++||.+.|++
T Consensus 289 ~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l 368 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVM 368 (418)
T ss_pred HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 66666544443322 12334455666777666666666777888999999999999974466777889999999998
Q ss_pred ecc
Q 011369 484 QVC 486 (487)
Q Consensus 484 ~~~ 486 (487)
.|+
T Consensus 369 ~~~ 371 (418)
T TIGR00889 369 VEK 371 (418)
T ss_pred HHH
Confidence 875
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=99.92 E-value=9.4e-25 Score=212.12 Aligned_cols=374 Identities=11% Similarity=0.021 Sum_probs=246.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc------hhHHHHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAICRML 179 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a------~~~~~l~~~r~l 179 (487)
|.+++++|+|..+++++.++. ....+++++.|+++||+|||++++++.++++++.++++++ ++++.+++.|++
T Consensus 51 ~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 51 GAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHH
Confidence 789999999999999998874 4456788889999999999999999999999999999997 689999999999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh-HHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
.|+|.+...+.....+.+|+| ++||+++|+...+.++|..+ +++..+++. .+|++.|++.+++.++..++.+++.+
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhhee
Confidence 999999999999999999997 68999999999999999976 555555544 36999999999998888877777663
Q ss_pred cccCCC---CC---CCcccchhh---ccc--------c------------------------------------------
Q 011369 259 LQLKGF---AP---AESGKAQVV---ASV--------S------------------------------------------ 279 (487)
Q Consensus 259 ~~~~~~---~~---~~~~~~~~~---~~~--------~------------------------------------------ 279 (487)
+.+... .+ +++.+...+ ... .
T Consensus 207 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~l 286 (591)
T PTZ00207 207 LPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVL 286 (591)
T ss_pred CCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 332111 00 011110000 000 0
Q ss_pred ----c----------CcccC-CCcccccccchhhhhhhhhccccccchhh-hhhhhhHHHHhhhcchhHHHHHHHHHHHH
Q 011369 280 ----E----------GSEAS-NLNDHVSEDISDQASERSIKSIGESRFLN-QLSQFSQDTKVLLQEKVYVVNVLGYIAYN 343 (487)
Q Consensus 280 ----~----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (487)
. ...+. +.+.+..+..+...+....+........+ ...+.-..+.+.+++..+|++...+++..
T Consensus 287 ll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~ 366 (591)
T PTZ00207 287 TVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCV 366 (591)
T ss_pred HHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhh
Confidence 0 00000 00000000000000000000000000000 00111126777888999999999999988
Q ss_pred hhheeeeecccceeeecccc-ccc--ceeeeceeecccchhhhhhhhhHhhhcccc----hhhhHHHHHHHHHHHHHHHH
Q 011369 344 FVIGAYSYWGPKAGYNIYHM-SNA--DMMFGGVTIVCGIVGTISGGFILDQMGATI----SNAFKLLSAATFLGAISCLT 416 (487)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~~~~~~~~~~ 416 (487)
.....+...+-++.+...|. ... ...+.++..+++.+|++.+|.+.....+|+ .++-..+.+..+ +.+..++
T Consensus 367 g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~ll 445 (591)
T PTZ00207 367 GAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLT 445 (591)
T ss_pred CchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHH
Confidence 88777887788777776455 222 223667888999999999999984444432 222133333333 3333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCc-cceeeeeecc
Q 011369 417 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQVC 486 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~-p~~~g~l~~~ 486 (487)
+...-+...+.+..++.|++.|..++.....+.+.+. ++-|+-..++ ...+-+|..+- -.+.|.++|+
T Consensus 446 l~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~-~~a~pigs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 446 LFLTLPKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFC-FLGSVLSAIFLNRLLYGEWYTQ 514 (591)
T ss_pred HHHHCCccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHH-hHHHHHHHHHHHHHHHHHHHHH
Confidence 3333222567788888899999999988888888887 8888888776 55555555442 4556666653
No 95
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=8.1e-25 Score=213.14 Aligned_cols=371 Identities=12% Similarity=0.041 Sum_probs=226.3
Q ss_pred cccc--cccCccccchhhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 108 IQGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 108 i~~~--~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+.++ +|++..+.+++.+.+.++..++++++|+++|| +|||++++++.++.+++.++.+++++++.++++|++.|+|.
T Consensus 37 l~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~ 116 (475)
T TIGR00924 37 LVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGS 116 (475)
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhcc
Confidence 4455 89999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCc---hhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 185 ASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
|...+...++++|++|+++ |++++++++.+.++|..+||++++.+.+++|||+.|++.++..++.. +.++..++..
T Consensus 117 g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~ 195 (475)
T TIGR00924 117 GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHML 195 (475)
T ss_pred ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHccccc
Confidence 9999999999999998764 88899999999999999999999999998999999999886544433 3333333322
Q ss_pred CCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccc----------cchhhhhhhhhHHHHhhhcchh
Q 011369 262 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE----------SRFLNQLSQFSQDTKVLLQEKV 331 (487)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 331 (487)
++..+++++.....+........ ................+....+. ........+...+..+..|...
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (475)
T TIGR00924 196 RDIGSVPDPLSGQGKTYGKLLLA--LLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYA 273 (475)
T ss_pred ccCCCCCCCcchhhhhhHHHHHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHH
Confidence 21111110000000000000000 00000000000000000000000 0000000000000000012223
Q ss_pred HHHHHHHHHHHHhhheeeeecccceeeecccccccc-----eeeeceeecccchhhhhhhhhHhhhcccch--hhhHHHH
Q 011369 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-----MMFGGVTIVCGIVGTISGGFILDQMGATIS--NAFKLLS 404 (487)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~ 404 (487)
+....+...+....+....+.++.+.++..+.+... ..+.++..+..++..++..++..|++||.. ....-+.
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 344444444445555455555565554432222111 123334444444444444444445554311 1111234
Q ss_pred HHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCC
Q 011369 405 AATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
++.++..++...... ..+.++.+...++.+++.....|....++.+..|++.||+.+|+. .....+|..+
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~-~l~~~~g~~l 432 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMW-FLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHH-HHHHHHHHHH
Confidence 455555444444332 246777888889999999999999999999999999999999997 5666667766
Q ss_pred ccceeee
Q 011369 476 SSPLVGV 482 (487)
Q Consensus 476 ~p~~~g~ 482 (487)
++.+.+.
T Consensus 433 ~~~~~~~ 439 (475)
T TIGR00924 433 GGYLATF 439 (475)
T ss_pred HHHHHHH
Confidence 6665543
No 96
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.91 E-value=6.3e-23 Score=198.86 Aligned_cols=358 Identities=20% Similarity=0.342 Sum_probs=276.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-----------------
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----------------- 167 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----------------- 167 (487)
+..+++.|+++.++.|++.+.+-++..+...+..+..-|..|-+.+-+|+++++++++++++-
T Consensus 120 IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~ 199 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQS 199 (735)
T ss_pred hhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhcc
Confidence 478999999999999999999999999999999999999999999999999999999998761
Q ss_pred ---h------------------------------h-H-HHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHH
Q 011369 168 ---F------------------------------D-F-WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY 212 (487)
Q Consensus 168 ---~------------------------------~-~-~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 212 (487)
+ + . ..++++.++.|+|....++.+.+|+-|.+.+++-...+|++.
T Consensus 200 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~ 279 (735)
T KOG3626|consen 200 VENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILY 279 (735)
T ss_pred ccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHH
Confidence 0 0 2 257889999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHhhcccc-------------------chHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccc-
Q 011369 213 MCIPTGVALGYVYGGVVGSHL-------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA- 272 (487)
Q Consensus 213 ~~~~~G~~~g~~~~~~l~~~~-------------------~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~- 272 (487)
+...+|.++|.++++++...+ .|..-|++.+.+.++..+..++++ +.+++..++.+.++
T Consensus 280 ~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fP-k~lp~~~~~~~~~~~ 358 (735)
T KOG3626|consen 280 SMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFP-KELPKSQKRKRARDL 358 (735)
T ss_pred HHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCc-ccCccccccchhhhh
Confidence 999999999999998876321 277788888888877777766664 43322211100000
Q ss_pred hhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeec
Q 011369 273 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 352 (487)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (487)
...+.. . ..........+..+++++..+++++||.+...++...+....+.++.+|
T Consensus 359 ~~~k~~--------~----------------~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tF 414 (735)
T KOG3626|consen 359 HVLKTE--------S----------------GGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITF 414 (735)
T ss_pred cccccc--------c----------------ccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHh
Confidence 000000 0 0000111111456788889999999999999999999999999999999
Q ss_pred ccceeeecccccccce--eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH-----------
Q 011369 353 GPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------- 419 (487)
Q Consensus 353 ~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 419 (487)
+|.|++++++.+...+ +...+...+..+|.+++|++..|+.-+.+...++.++..++..++....++
T Consensus 415 lPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~ 494 (735)
T KOG3626|consen 415 LPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGV 494 (735)
T ss_pred hHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccce
Confidence 9999999999987666 333444566778999999999999876544334444444444444333221
Q ss_pred --------------------------------------------------------------------HH----------
Q 011369 420 --------------------------------------------------------------------LS---------- 421 (487)
Q Consensus 420 --------------------------------------------------------------------~~---------- 421 (487)
..
T Consensus 495 ~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~ 574 (735)
T KOG3626|consen 495 TNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAK 574 (735)
T ss_pred ecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceee
Confidence 01
Q ss_pred ----------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 422 ----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 422 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
....+++.+++..+..+....+.+.++.+.+++++|..++|+..+..+.+|.+-+|++.|+++|.+
T Consensus 575 ~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 575 KGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 023455666667777778888999999999999999999999988999999999999999999963
No 97
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.91 E-value=2.1e-25 Score=201.07 Aligned_cols=384 Identities=14% Similarity=0.126 Sum_probs=252.2
Q ss_pred chhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCcccccc--------ccCccccchhhhHHHHHHHHHHH
Q 011369 64 KRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDF--------KLNNFQDGVLSSAFMVGLLVASP 135 (487)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~--------~~s~~~~~~~~s~~~~~~~i~~~ 135 (487)
.+.+.+...+.+.+.||...++.. . |-+...+ +.++...+.+..+..+|..+||+
T Consensus 40 fk~i~iAG~GfftDsYDlF~I~lV--t---------------~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl 102 (538)
T KOG0252|consen 40 FKAIIIAGMGFFTDSYDLFSISLV--T---------------KILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQL 102 (538)
T ss_pred HHHHHHhhhhhcccchhhhhHHHH--H---------------HHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHH
Confidence 345666677788899998888753 1 2222221 24556678899999999999999
Q ss_pred HHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch-------hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHH
Q 011369 136 IFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (487)
Q Consensus 136 ~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~ 208 (487)
+.|+++||+|||+++...+++..+++++++++. -.+++...|++.|+|.|+-+|.+.+..+|...+++||...
T Consensus 103 ~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~i 182 (538)
T KOG0252|consen 103 FFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFI 182 (538)
T ss_pred HHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcccccee
Confidence 999999999999999999999999999888753 2678999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhHHHHHHhhcc-------------c--cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccch
Q 011369 209 SMFYMCIPTGVALGYVYGGVVGS-------------H--LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 273 (487)
Q Consensus 209 ~~~~~~~~~G~~~g~~~~~~l~~-------------~--~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 273 (487)
+...+..+.|...|.+++-.+.. + .=||..|.+.++++++.....+.+ ||+.+.....+++.+.
T Consensus 183 aavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M-~Et~~Y~al~~~~~~~ 261 (538)
T KOG0252|consen 183 AAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKM-PETARYTALVSKKLKQ 261 (538)
T ss_pred EEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcC-CcchhHHHHhhcCHhh
Confidence 99988888888888877755431 0 139999999988876665554443 6654432111111010
Q ss_pred hhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecc
Q 011369 274 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 353 (487)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (487)
..++..+.... .++.++.. .+....++ .....+.+-+.+. .-+.++..+..+++.-.+++....+.
T Consensus 262 a~~d~~k~~~~---------~~~~~~~~-~~~~~~~~---~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~ 327 (538)
T KOG0252|consen 262 AAGDMKKVLSV---------DIEAESTA-ESDVPPPS---NSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQ 327 (538)
T ss_pred hhhcccccccc---------ccchhhcc-ccCCCCcc---cccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHH
Confidence 00000000000 00000000 00000000 1111111222222 34667778888888888888888887
Q ss_pred cceeeecccccccc--------e-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH--
Q 011369 354 PKAGYNIYHMSNAD--------M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-- 422 (487)
Q Consensus 354 p~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 422 (487)
..++++..-.+... + .-..+...+.++|..+...++|++||+ +..+.+.++..+..+.+....+
T Consensus 328 s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~~~~~y~~~ 402 (538)
T KOG0252|consen 328 SVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFVIAGPYNQL 402 (538)
T ss_pred HHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHHHcCCcccc
Confidence 77776532222111 1 111233455666888999999999998 6777777777666666554333
Q ss_pred --HHHHHHHHHHHHHHHhccCCCeeEE-EEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeec
Q 011369 423 --LYGFLALFTVGELLVFATQAPVNYV-CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 423 --~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
....+++..+..++....-.....+ -.+.+|.+.|++..|+. ...+-+|+++|...++++.|
T Consensus 403 ~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIs-AA~GK~GAivg~~~F~~~t~ 467 (538)
T KOG0252|consen 403 ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGIS-AASGKAGAIVGAFGFLYLTD 467 (538)
T ss_pred cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHH-HHhccchHHHHHHHhhHhhh
Confidence 2334455555555555444444444 45555569999999997 77888899999888877766
No 98
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.90 E-value=1.1e-25 Score=219.05 Aligned_cols=365 Identities=21% Similarity=0.383 Sum_probs=3.0
Q ss_pred CCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch----------------
Q 011369 105 GSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---------------- 168 (487)
Q Consensus 105 l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---------------- 168 (487)
+..+++.|+++..+.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.+++++++++=+
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 4889999999999999999999999999999999999998888899999999999999876500
Q ss_pred ----------------------------------hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhh
Q 011369 169 ----------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 214 (487)
Q Consensus 169 ----------------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 214 (487)
-+..++++.++.|+|.+..++.+.+|+-|.+++++-+..+|++.+.
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 1456789999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHhhccc---------------------c-chHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccc
Q 011369 215 IPTGVALGYVYGGVVGSH---------------------L-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 272 (487)
Q Consensus 215 ~~~G~~~g~~~~~~l~~~---------------------~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 272 (487)
..+|.++|.++++.+.+. . .|-.-|++.+++.++.++..+++ |+..+...+.++.++
T Consensus 186 ~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~~~~~~~~~~ 264 (539)
T PF03137_consen 186 SILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPGTSERQEEKE 264 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCcccccchhh
Confidence 999999999999876531 1 26666777777766666665555 544333211111100
Q ss_pred hhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeec
Q 011369 273 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 352 (487)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (487)
..+... ++...+...+........+..+++++..+++++||.+....+..........++.++
T Consensus 265 ~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF 327 (539)
T PF03137_consen 265 SSERKE-----------------EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATF 327 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhcch-----------------hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000 000000000000001122556788889999999999999999999999999999999
Q ss_pred ccceeeecccccccce-e-eeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH----------
Q 011369 353 GPKAGYNIYHMSNADM-M-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---------- 420 (487)
Q Consensus 353 ~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 420 (487)
.|.|++.+++.++..+ . ...+...++.+|.+++|++.+|++-+.+...++.++..++..+.....+..
T Consensus 328 ~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv 407 (539)
T PF03137_consen 328 LPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGV 407 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeee
Confidence 9999999999987666 3 334444677899999999999997664433333333333333331111110
Q ss_pred -----------------------------------------HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhH
Q 011369 421 -----------------------------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 459 (487)
Q Consensus 421 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 459 (487)
.....+++.+++..+..+....+......+.+++++|+.
T Consensus 408 ~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~ 487 (539)
T PF03137_consen 408 TVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSF 487 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcch
Confidence 012234455556666667778888889999999999999
Q ss_pred HHHHHHHHHHhhcCCCccceeeeeeccC
Q 011369 460 SMAISTVSIHIFGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 460 ~~g~~~~~~~~~g~~~~p~~~g~l~~~~ 487 (487)
|.|+.....+.+|.+-||++.|.+.|.+
T Consensus 488 AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 488 ALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------
T ss_pred hhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 9999988889999999999999999964
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.90 E-value=5.2e-24 Score=204.04 Aligned_cols=327 Identities=10% Similarity=-0.053 Sum_probs=220.5
Q ss_pred CCCccccccccCccccchhh--hHHHHHHHHHHHHHHH-hhhhcCCCeEehhHHHHH-HHHHHHhh---cchh-HHHHHH
Q 011369 104 SGSGIQGDFKLNNFQDGVLS--SAFMVGLLVASPIFAS-LAKSHNPFRLIGVGLSVW-TFATAGCG---SSFD-FWSIAI 175 (487)
Q Consensus 104 ~l~~i~~~~~~s~~~~~~~~--s~~~~~~~i~~~~~g~-l~dr~Grr~~l~~~~~~~-~~~~~~~~---~a~~-~~~l~~ 175 (487)
.+|.+.+|.|.|.+++|++. ++..+...+.+++++. ..||+||||..++.+.+. +......+ ...+ ..+++.
T Consensus 23 ~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (390)
T TIGR02718 23 ALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVG 102 (390)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHH
Confidence 45889999999999999974 6778888888888855 799999999976665332 21122222 2322 334455
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
.-++.++..+...+....+..|..++++++...+....+..+|.++|+...+++.+++|||..|++.+++.++..+..++
T Consensus 103 ~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~ 182 (390)
T TIGR02718 103 LLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLW 182 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777787888888899999998888998999998889999999999999999999999999999888776666555
Q ss_pred ccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHH
Q 011369 256 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 335 (487)
Q Consensus 256 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (487)
..|+.+++ ++ .+. + ..++.++.+|+|.++..
T Consensus 183 ~~~~~~~~---~~-~~~-----------------------------------------~----~~~~~~~~l~~~~~~~~ 213 (390)
T TIGR02718 183 LKDRAVAS---PE-APL-----------------------------------------A----RRASLFRFFRRPLAWSL 213 (390)
T ss_pred cCCCCcCc---cc-cch-----------------------------------------h----hHHHHHHHHcCcCHHHH
Confidence 54432100 00 000 0 01235567788887777
Q ss_pred HHHHHHHHhhheeeeecccceeeecccccccce-eeeceee-cccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHH
Q 011369 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI-VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (487)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (487)
....++..........+.+.|+++ .|.++... ....... ...+++.++.|++.||+++| +.+..+..+....
T Consensus 214 ~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~ 287 (390)
T TIGR02718 214 LALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-----RTFILGVGLAGSL 287 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHH
Confidence 766666666666666778888887 57776665 3323333 45667888999999999988 5555444433222
Q ss_pred HHHHHHHH------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCC-CchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 414 CLTAFCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 414 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.+...... +....+....+.++..+...+.......+..++ +.+++..+.. .....+|.++||.+.|++.|+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~lg~~~g~~~~G~l~~~ 366 (390)
T TIGR02718 288 ALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV-QSTRDLGELIASSIAGYLTDR 366 (390)
T ss_pred HHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 22222111 112222223333344455555555555566666 8899999997 556677889999999998874
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.88 E-value=5.2e-22 Score=194.60 Aligned_cols=145 Identities=17% Similarity=0.134 Sum_probs=126.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHHHHHHHHHHHhhcch-hHHHHHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G~g 183 (487)
..+.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.++++|+++|+|
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 45678999999999999888887777777899999999 5999999999999999999998874 567778899999999
Q ss_pred hhhhhhhhhhhhhhcCCCCc--hhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 011369 184 EASFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 250 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~ 250 (487)
.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|++.++..++..
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~ 194 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITV 194 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999998654 45688999999999999999999999999999999999876544433
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.85 E-value=3.2e-21 Score=187.73 Aligned_cols=327 Identities=12% Similarity=0.041 Sum_probs=216.9
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCC-eEehhHHHHHHHHHHHhhcchh------HHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIA 174 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~~~l~ 174 (487)
+.+.+++|+++.++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..++..++....++ +..++
T Consensus 34 ~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~ 113 (444)
T PRK09669 34 YFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYAC 113 (444)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 45678899999999999999999999999999999999 7775 5566677777776665544442 56667
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcC-CCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc-------ccchHHHHHHHHHHH
Q 011369 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILM 246 (487)
Q Consensus 175 ~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr~~f~~~~~~~ 246 (487)
+..++.+++.........++.+|+. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.+++.
T Consensus 114 ~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~ 193 (444)
T PRK09669 114 VTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLG 193 (444)
T ss_pred HHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 7777778777777778889999998 45789988888888888887777654433221 357999999888887
Q ss_pred HHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhh
Q 011369 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (487)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (487)
++..++.++..+|.... +++++ .+..++.+.+
T Consensus 194 ~v~~~~~~~~~~e~~~~----~~~~~--------------------------------------------~~~~~~~~~~ 225 (444)
T PRK09669 194 VVLFFCCFFMTKERYTP----EVDNS--------------------------------------------SSVWKDLKLL 225 (444)
T ss_pred HHHHHHHhCCeEEecCC----CCcCC--------------------------------------------CCHHHHHHHH
Confidence 77666655554442111 00000 0112456778
Q ss_pred hcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHH
Q 011369 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (487)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (487)
++||.++......++............+.|.+...+.+.....+.....+..+++.++.+++.||+|+| +....+
T Consensus 226 ~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~ 300 (444)
T PRK09669 226 LGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWT 300 (444)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHH
Confidence 899998887766665544443333333334343333222222233334466678888999999999988 555544
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-------CCchhHHHHHHHHHHHhhcCCCcc
Q 011369 407 TFLGAISCLTAF--CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 407 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
.....+..+... ..++.+..++..++.+++.+...+...+++.|..+ .+..|...|.. .....+|..+||
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~-~~~~klg~alg~ 379 (444)
T PRK09669 301 IVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTN-LFAIKLGLAIGG 379 (444)
T ss_pred HHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHH-HHHHHHHHHHHH
Confidence 443333222222 22445555666677788888777777777777664 23456677775 666777888999
Q ss_pred ceeeeeecc
Q 011369 478 PLVGVLQVC 486 (487)
Q Consensus 478 ~~~g~l~~~ 486 (487)
.+.|++.|.
T Consensus 380 ~i~g~ll~~ 388 (444)
T PRK09669 380 AVVGWILAW 388 (444)
T ss_pred HHHHHHHHH
Confidence 998887664
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.7e-22 Score=170.62 Aligned_cols=354 Identities=12% Similarity=0.016 Sum_probs=234.0
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh-c
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-H 144 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~ 144 (487)
.+..+|+..+..++.....+.. ..+.++|.+++.++..++.++|+....+..+++|++.|| +
T Consensus 45 ~lv~mc~lgfgsyfcyd~p~al-----------------q~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f 107 (459)
T KOG4686|consen 45 ALVFMCLLGFGSYFCYDAPGAL-----------------QIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF 107 (459)
T ss_pred HHHHHHHhcccceeecCCchhh-----------------hhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh
Confidence 4445556566655554444432 256778889999999999999999999999999999997 6
Q ss_pred CCCeEehhHHHHHHHHHHHhh---cchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 145 NPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~---~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
|-|+.-++-+.+..+|.++++ ..+.+|.+.++|++.|+|.-...++-+.+..-|+..|+.+.++|+..+..-+|..+
T Consensus 108 gir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 108 GIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 888877776767777777765 46899999999999999998888899999999999999999999999999999988
Q ss_pred HHHHHHhhccccch------HHH---HHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCccccc
Q 011369 222 GYVYGGVVGSHLNW------RYA---FWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVS 292 (487)
Q Consensus 222 g~~~~~~l~~~~~w------r~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (487)
--.+.+++.+..+= +.. ....+.......+......-- . ++..++....++. ..
T Consensus 188 Nf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~----~-D~rAerilh~e~g-------~~----- 250 (459)
T KOG4686|consen 188 NFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGL----S-DDRAERILHLEEG-------FL----- 250 (459)
T ss_pred eeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhh----h-hhHHHHHHhhhcC-------cc-----
Confidence 77777777654321 111 111111111111111111100 0 0000000000000 00
Q ss_pred ccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eee
Q 011369 293 EDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG 371 (487)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~ 371 (487)
. +. .+ ..+.+ -..|.+|...+..+++..+..-+...-|.++++++|+++.++ .+.
T Consensus 251 -----------G-e~------pk----Ltdv~--~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~ 306 (459)
T KOG4686|consen 251 -----------G-EE------PK----LTDVN--TFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNIL 306 (459)
T ss_pred -----------c-CC------cc----ccccc--ccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchh
Confidence 0 00 00 00000 124778888888888888888888888999999999998777 666
Q ss_pred ceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE
Q 011369 372 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL--TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 449 (487)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (487)
+.......+..++.|.++||.|++ .+.+.+..+..+..- +.+..-+++. .+++.|..+...-......++
T Consensus 307 s~vy~Isav~spvfg~i~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy~---~m~~lGLsysllAcslWP~va 378 (459)
T KOG4686|consen 307 STVYGISAVLSPVFGAISDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPYT---SMTFLGLSYSLLACSLWPCVA 378 (459)
T ss_pred hhhhhhhhhhhhhHHHhHhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHHH---HHHHHhhhHHHHHHHHhhhhh
Confidence 677777888899999999999998 444444443333322 2222223333 333334333322222344455
Q ss_pred eecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 450 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 450 ~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
..+|.+.-|++.|.+ .....+|-.+.|+++|.+.|+
T Consensus 379 ~~vpE~qLGTaygf~-qsIqNLgla~i~Iiag~i~d~ 414 (459)
T KOG4686|consen 379 SLVPEEQLGTAYGFI-QSIQNLGLAFIPIIAGFIADG 414 (459)
T ss_pred hhCCHHHhcchHHHH-HHHHhhhhhHHhhhhheeecC
Confidence 567888999999998 566667999999999999885
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.84 E-value=3.4e-21 Score=187.28 Aligned_cols=366 Identities=14% Similarity=0.022 Sum_probs=231.9
Q ss_pred hhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc
Q 011369 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (487)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~ 144 (487)
..+.++...++..++. ...... ..|.+.+++|++.++++...+...+...+-.+ +|+++||+
T Consensus 26 ~~~~~~~~~y~~qGl~-~l~~~~----------------~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~ 87 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIA-GLMRLP----------------LSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF 87 (468)
T ss_pred hHHHHHHHHHHHhhHH-HHhhhh----------------hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc
Confidence 3555566666666665 333221 12677888999999999999999999999666 99999999
Q ss_pred C-----CCeEehhHHHHHH-HHHHHhhcchhHHHH-HHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHH---HHHHHhh
Q 011369 145 N-----PFRLIGVGLSVWT-FATAGCGSSFDFWSI-AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW---LSMFYMC 214 (487)
Q Consensus 145 G-----rr~~l~~~~~~~~-~~~~~~~~a~~~~~l-~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~ 214 (487)
+ ||+.++++.++.+ +.....+..++...+ .+.+++.+++.+...++.-+++.|..+ |++... .+.....
T Consensus 88 ~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~ 166 (468)
T TIGR00788 88 PLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGA 166 (468)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHH
Confidence 8 7777888877763 444444444554444 448899999999999999999999998 555443 3344444
Q ss_pred hhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCccccccc
Q 011369 215 IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (487)
Q Consensus 215 ~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (487)
..+|.++|+.++|.+.+.++||..|++.+++.++..+ ..++.||++....++...+.. ... .
T Consensus 167 ~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~~~~~~----------------~~~-~ 228 (468)
T TIGR00788 167 SATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSNLSKERRAFVRPRIGTYLE----------------MNM-A 228 (468)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHHhcccccccccccccccch----------------hhh-h
Confidence 5589999999999999999999999999888776633 344445532100000000000 000 0
Q ss_pred chhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHH-HHhhheeeeecccceeeecccccccce-eeec
Q 011369 295 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGG 372 (487)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~ 372 (487)
..... ..+..++..+..++.+++|.++...+..++ ..........+ -.+.++..|.++... ....
T Consensus 229 ~~~~~------------~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~ 295 (468)
T TIGR00788 229 LLTLG------------VLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKV 295 (468)
T ss_pred hhhhh------------HHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHH
Confidence 00000 000111222345556777887775555444 22222211111 012334466776655 3334
Q ss_pred eeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHhccCC
Q 011369 373 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------LSSLYGFLALFTVGELLVFATQA 442 (487)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 442 (487)
...++.+++....+++.+|++.| +.+.++.++.++..+.... ..+.+.......+.+++.+..+.
T Consensus 296 ~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~ 370 (468)
T TIGR00788 296 VGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFM 370 (468)
T ss_pred HHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHc
Confidence 44566666666777766666655 6666666666655433210 02233444556677777778888
Q ss_pred CeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 443 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 443 ~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+...++.+..|++.+|+..++. .....+|..+++.++|++.++
T Consensus 371 ~~~~~~~~~~p~~~egt~~al~-~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 371 PFLVLLARLCPSGCESSVFALL-ASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred cHHHHHHHhCCCCceehHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999997 556677888999888877664
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=8.9e-21 Score=183.69 Aligned_cols=328 Identities=15% Similarity=0.113 Sum_probs=251.9
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhh----hcCCCe-EehhHHHHHHHHHHHhhcc-h-------hHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFR-LIGVGLSVWTFATAGCGSS-F-------DFWS 172 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~a-~-------~~~~ 172 (487)
+...+.+|+++...|.+..+.-+-.++..|+.|.++| |+|||| .+++|..+.+++.+++... + ....
T Consensus 26 ~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~ 105 (428)
T PF13347_consen 26 YFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVW 105 (428)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHH
Confidence 4566777999999999999999999999999999999 899665 5667888888888877766 4 2344
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-------cchHHHHHHHHH
Q 011369 173 IAICRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAI 244 (487)
Q Consensus 173 l~~~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~~wr~~f~~~~~ 244 (487)
+.+.-++..++.........++..|..+ +++|.+..+.-..+..+|.++...+.+.+.+. .+|++..++.++
T Consensus 106 ~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~i 185 (428)
T PF13347_consen 106 LFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAI 185 (428)
T ss_pred HHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHH
Confidence 6777777799999999999999999998 57899999999998888887666666555422 169999999999
Q ss_pred HHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHH
Q 011369 245 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 324 (487)
Q Consensus 245 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (487)
+.++..++..+..+|..+.. +++ ++..+..+.++
T Consensus 186 v~~v~~~i~~~~~ke~~~~~--~~~--------------------------------------------~~~~~~~~~~~ 219 (428)
T PF13347_consen 186 VGLVFFLITFFFVKERSVEV--TEQ--------------------------------------------EKKISLRDSLR 219 (428)
T ss_pred HHHHHhhhhhheeeeccccc--ccc--------------------------------------------ccccccccchh
Confidence 98888888777776611110 000 00112224567
Q ss_pred hhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHH
Q 011369 325 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 404 (487)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 404 (487)
.+++||.+....+..++...+........+.|.+...+.+.....+..+..++.+++.++.++++||+|+| +.+.
T Consensus 220 ~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~ 294 (428)
T PF13347_consen 220 SLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYI 294 (428)
T ss_pred hhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehh
Confidence 88899999998888888888888777777888887777664333555567788899999999999999999 6777
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCC-------CchhHHHHHHHHHHHhhcCCC
Q 011369 405 AATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~g~~~~~~~~~g~~~ 475 (487)
.+..+.++..+.....+ +.+..++..++.+++.+..+....++..|..+. +..|...|.. .....++..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~-~~~~k~~~~l 373 (428)
T PF13347_consen 295 IGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN-SFFIKIGQGL 373 (428)
T ss_pred hhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh-hhhhHHHHHH
Confidence 77777777666666554 778888888999999999988889999988863 4457888885 6666667777
Q ss_pred ccceeeeeec
Q 011369 476 SSPLVGVLQV 485 (487)
Q Consensus 476 ~p~~~g~l~~ 485 (487)
++.+.|.+.+
T Consensus 374 a~~i~g~~l~ 383 (428)
T PF13347_consen 374 AGAIVGLLLA 383 (428)
T ss_pred HHHHHHHHHH
Confidence 8777776544
No 105
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.83 E-value=1.2e-20 Score=173.19 Aligned_cols=266 Identities=13% Similarity=0.116 Sum_probs=193.5
Q ss_pred hcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc------------
Q 011369 165 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 232 (487)
Q Consensus 165 ~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 232 (487)
+...+|+.++++-++.|.|.+...+..+.++++..++|++.+.+++.+..+++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999999999999999999999999999999999999999999977731
Q ss_pred ----cchHHHHHHHHHHHHHHHHHHhhcc-ccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccc
Q 011369 233 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 307 (487)
Q Consensus 233 ----~~wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (487)
.+||++|++.+++.++..++..+.. ||.. +++.++...+
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~-----~~~~~~~~~~------------------------------- 128 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQ-----EADVARVSSG------------------------------- 128 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-----cccccccccc-------------------------------
Confidence 4799999988777555555443332 3311 0100000000
Q ss_pred cccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeec--ccccccce-eeeceeecccchhhhh
Q 011369 308 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 384 (487)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 384 (487)
+. ...++.+++|.++...+..+++.....++..|.+.|+.+. ++.++... ...+....+..+|+++
T Consensus 129 ------~~-----~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 129 ------DT-----TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred ------cc-----cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0012345677888888888888878888899999999754 57776555 5556777888999999
Q ss_pred hhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHH
Q 011369 385 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 464 (487)
Q Consensus 385 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~ 464 (487)
++++.||+++| +.+..+..+.++..++....+... ......+.+++.+..+|.......+..|+ +.+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 555555555555444443333322 23355577888888999888888887765 456677764
Q ss_pred HHHHHhhcCCCccceeeeeecc
Q 011369 465 TVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 465 ~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
....+|+++.|.+.|.+.|+
T Consensus 271 --~~~~~Gg~i~P~l~G~lad~ 290 (310)
T TIGR01272 271 --CLAIVGGAIVPLLQGSLADC 290 (310)
T ss_pred --HHHHhcchHHHHHHHHHHHh
Confidence 45667889999999998885
No 106
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.83 E-value=1.1e-20 Score=178.28 Aligned_cols=328 Identities=18% Similarity=0.125 Sum_probs=237.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC-CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+..-++.|.|..|+|.+.++..+...+.++++|.++||++ +|+++.+..++.++........++++.+++.-++..+..
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 105 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF 105 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 5566778999999999999999999999999999999986 577888888888887777788889999999888888888
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHH-HHhhcccc---chHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~-~~~l~~~~---~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
....|...++..+... ++++-.|-.....++|.+++... ++.+.... +....+++.+...++.....+ .+|+.
T Consensus 106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~ 182 (400)
T PF03825_consen 106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKT 182 (400)
T ss_pred ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 8888888888888875 33444566666677777666443 22233222 223456666655544443333 34554
Q ss_pred cCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHH
Q 011369 261 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 340 (487)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (487)
++++..+++.++ +...+..+++|+|++..+.+..+
T Consensus 183 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~llk~~~~~~Fll~~~ 217 (400)
T PF03825_consen 183 PPKRSAKESVKK---------------------------------------------LLGLDALKLLKNPRFLVFLLAAF 217 (400)
T ss_pred ccccccCCCccc---------------------------------------------ccchHHHHHhcCccHHHHHHHHH
Confidence 321111111110 00123346889999999888888
Q ss_pred HHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHH
Q 011369 341 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 419 (487)
Q Consensus 341 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (487)
+.......+..+.+.|+++..+.+.... ...++..++.++.-...+++..|+|.+ +++.++.+..++=..+...
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999776543333 333455567778888888899998887 7777777776666655555
Q ss_pred H-HHHHHHHHHH----HHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 420 L-SSLYGFLALF----TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 420 ~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
. ++.+..+... .+.|..++..+.....++.+..|++.|+++.++.......+|.++|..++|++.|+
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5 4444333333 35788888888888899999999999999999987777888999999999999886
No 107
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.82 E-value=5.7e-20 Score=176.67 Aligned_cols=328 Identities=14% Similarity=0.102 Sum_probs=248.7
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEeh-hHHHHHHHHHHHhhcc-h-hHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 117 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~a-~-~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
+..++..++..+..++..|+.|.++|+-|+||.++ +...+..+.+.+..+. + +++...+.-++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788999999999999999999998776554 4445555566666663 3 4544455555666777788888999
Q ss_pred hhhhcCCCCch--------------------------hHHHHHHHhhhhhhhhhHHHHHHhhcc--------ccchHHHH
Q 011369 194 FIDDNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAF 239 (487)
Q Consensus 194 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~~wr~~f 239 (487)
++.|..+++++ ++..+.-.....+|.++.-++.-.+.. ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 898888888888888887776644421 23468999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhh
Q 011369 240 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 319 (487)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (487)
.+.++..++..+..++..|+.++....++..+. .....++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~g~~~l 270 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY---------------------------------------LRFGFKRL 270 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH---------------------------------------HHHHHHHH
Confidence 999999888888888888775432111111110 01344566
Q ss_pred hHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchh
Q 011369 320 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN 398 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 398 (487)
.+.+|++.+.|....+++.+++..-+...+......|.++..+++..+. .+..+..+.+++|.++.+++.||+|.|..
T Consensus 271 ~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~- 349 (477)
T PF11700_consen 271 WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK- 349 (477)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-
Confidence 6777888889999999999999998888888889999998999998777 55566779999999999999999999843
Q ss_pred hhHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHh
Q 011369 399 AFKLLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 470 (487)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~ 470 (487)
+.+....++..+..+.... .++.+.++++..+.|++.+..++..-++..+..|+++.+...|++ ...+.
T Consensus 350 --~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly-~i~gk 426 (477)
T PF11700_consen 350 --RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLY-AITGK 426 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHH-HHHHH
Confidence 2343333333333333333 456777888888999999999999999999999999999999997 67777
Q ss_pred hcCCCccceeeeeeccC
Q 011369 471 FGDVPSSPLVGVLQVCL 487 (487)
Q Consensus 471 ~g~~~~p~~~g~l~~~~ 487 (487)
..+.+||.+.|.+.|.+
T Consensus 427 ~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 427 ASSWLGPLLFGLITDAT 443 (477)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78899999999988753
No 108
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.82 E-value=6.1e-20 Score=175.20 Aligned_cols=334 Identities=13% Similarity=0.036 Sum_probs=220.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhh----hcCCCeEehhH-HHHHHHHHHHhhcchhHH---------
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW--------- 171 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~a~~~~--------- 171 (487)
+.+.+++|.+..+.+++..+..+...+.+++.|.++| |+||||.++++ .....++.++.++++++.
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 4466889999999999999999999999999999999 59999998775 666666767777776653
Q ss_pred --------HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCch--hHHHHHHHhhhhhhhhhHHHHHHhh--ccc-------
Q 011369 172 --------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSH------- 232 (487)
Q Consensus 172 --------~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l--~~~------- 232 (487)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.+++.. .+.
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 223333344557788888899999999998865 6899999999999999999999875 221
Q ss_pred ------cchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhcc
Q 011369 233 ------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 306 (487)
Q Consensus 233 ------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (487)
.+.|+.|++.+++.++..++..+..+|.+.... ++.+.. +. + ++... .
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~--~~~~~~---~~----~-----~~~~~----------~-- 241 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGS--DDFINS---EA----A-----PPSKH----------G-- 241 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCcc--ccchhh---hc----c-----ccccc----------c--
Confidence 157899999998888888888877777443211 100000 00 0 00000 0
Q ss_pred ccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceee-ecccccccce-----------eeecee
Q 011369 307 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSNADM-----------MFGGVT 374 (487)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~-----------~~~~~~ 374 (487)
.....++.++.++++ .+.++..++..++.++++..+..|.+.|.. +.++.++... ....+.
T Consensus 242 -----~~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~ 314 (477)
T TIGR01301 242 -----EEAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN 314 (477)
T ss_pred -----hhhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence 001122333344322 467888888899999988888888888765 3444332111 111223
Q ss_pred ecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHHHHH
Q 011369 375 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVG 433 (487)
Q Consensus 375 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 433 (487)
.+...+.+++..++.+|+|+|+ ....++.++.++++......++ .+..++.+.+.
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 3333455556677778887531 4546665555555555443332 25566777778
Q ss_pred HHHHhccCCCeeEEEEeecCC--CchhHHHHHHHHHHHhhcCCCcc
Q 011369 434 ELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~--~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
|+..+..+..-++++.++.++ +..|..+|+.|.+. .+..++..
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I-~lpQii~s 435 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAI-VIPQIIVS 435 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHH-HHHHHHHH
Confidence 888887777778888888874 56699999985543 33444433
No 109
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=6.1e-20 Score=179.79 Aligned_cols=332 Identities=7% Similarity=-0.058 Sum_probs=217.4
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhh----hcCC-CeEehhHHHHHHHHHHHhhcch------hHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSF------DFWSIA 174 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~a~------~~~~l~ 174 (487)
..+.+.+|+++.++|.+..+.-+.-++..|+.|.++| |+|| |+.++++.+..+++.+++-..+ .+..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 3456677999999999999999999999999999999 5698 5667778777777765554433 244566
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcC-CCCchhHHHHHHHhhhhhhhhhHHHHHHhhc-------cccchHHHHHHHHHHH
Q 011369 175 ICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILM 246 (487)
Q Consensus 175 ~~r~l~G~g~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~~wr~~f~~~~~~~ 246 (487)
+.-++.+++.....+...+++.|.. ++++|.+..++-..+.++|..+.+.+...+. +..+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 6777778888888889999999998 5889999998877777777666554443321 1236888888887776
Q ss_pred HHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhh
Q 011369 247 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 326 (487)
Q Consensus 247 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (487)
++..+..++..+|....... +.++ ++..+..+.++.+
T Consensus 191 ~~~~~~~~~~~~e~~~~~~~--~~~~-----------------------------------------~~~~~~~~~~~~~ 227 (473)
T PRK10429 191 IVSTIITLRNVHEVYSSDNQ--VSAE-----------------------------------------GSHLTLKDIVALI 227 (473)
T ss_pred HHHHHHHHcCceecCCcccc--cccc-----------------------------------------ccCCCHHHHHHHH
Confidence 66666665555552211000 0000 0000112345567
Q ss_pred hcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHH
Q 011369 327 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 406 (487)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 406 (487)
++||.++..+...++..........+.+.|.+...+.......+..+..++.+++.++.+++.||+|+| +.+..+
T Consensus 228 ~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~ 302 (473)
T PRK10429 228 YKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGA 302 (473)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHH
Confidence 789888887777776666666555566656555444322222333344467788889999999999998 555555
Q ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-------CCchhHHHHHHHHHHHhhcCC
Q 011369 407 TFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDV 474 (487)
Q Consensus 407 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~ 474 (487)
..+.++..+.... .++.+..++...+.+++.+..++....+..+..+ .+..|...|.. .....+|..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~-~~~~K~~~a 381 (473)
T PRK10429 303 SIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQ-TMVVKGGSA 381 (473)
T ss_pred HHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHH-HHHHHHHHH
Confidence 5443433322221 2334445555556666666666666666666644 34556677885 666777888
Q ss_pred Cccceeeeeecc
Q 011369 475 PSSPLVGVLQVC 486 (487)
Q Consensus 475 ~~p~~~g~l~~~ 486 (487)
+++.+.|++.|.
T Consensus 382 l~~~i~g~~l~~ 393 (473)
T PRK10429 382 FAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHHHHHHH
Confidence 899888887653
No 110
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.80 E-value=4.7e-19 Score=169.83 Aligned_cols=149 Identities=14% Similarity=0.124 Sum_probs=123.1
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHHHHHHHHHhhcch-hHHHHHHHHHHhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGE 184 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~-~~~~l~~~r~l~G~g~ 184 (487)
.+.+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++..++.++.+..+ +...++++..+.++|.
T Consensus 35 yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~ 114 (493)
T PRK15462 35 YLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGY 114 (493)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhc
Confidence 35677899999999999999999999999999999999 999999999999999987776543 2233444555556677
Q ss_pred hhhhhhhhhhhhhcCCCC--chhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 185 ASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
|...+...++++|.+|++ +|..++++.+.+.++|..++|.+.+.+.+.+|||+.|.+.++. .+..++.++.
T Consensus 115 G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig-m~l~li~~~~ 187 (493)
T PRK15462 115 GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG-MIAGLVIFLC 187 (493)
T ss_pred ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH-HHHHHHHHHH
Confidence 777788889999999975 6999999999999999999999999999999999999997664 3444444433
No 111
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=2e-18 Score=156.58 Aligned_cols=348 Identities=14% Similarity=0.103 Sum_probs=240.8
Q ss_pred ccccchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHH
Q 011369 60 WFTPKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFAS 139 (487)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~ 139 (487)
.+++|.+++++++..+.+.+....++.. .......++ +.+..-|+.-+|++.+....+++-|
T Consensus 40 y~rRW~vLl~~slL~~SN~~qWI~ya~i-----------------~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw 101 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLNFSNGMQWIQYAPI-----------------NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMW 101 (480)
T ss_pred chhHhHHHHHHHHHHhcCcchheeehhH-----------------HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3344556666677777776666555432 134455567 7778889999999999999999999
Q ss_pred hhhhcCCCeEehhHHHHHHHHHHHhhcch------hHH--HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHH
Q 011369 140 LAKSHNPFRLIGVGLSVWTFATAGCGSSF------DFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 211 (487)
Q Consensus 140 l~dr~Grr~~l~~~~~~~~~~~~~~~~a~------~~~--~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 211 (487)
+.|++|-|..++++.++.++|+.+-..+. .++ ....+..+.+.+.-.+...-..+..-||+++||..+..+-
T Consensus 102 ~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~ 181 (480)
T KOG2563|consen 102 ILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLG 181 (480)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHH
Confidence 99999999999999999999999877652 445 6778899999988888887788899999999999999999
Q ss_pred HhhhhhhhhhHHHHHHhhccc------cchHH--HHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcc
Q 011369 212 YMCIPTGVALGYVYGGVVGSH------LNWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 283 (487)
Q Consensus 212 ~~~~~~G~~~g~~~~~~l~~~------~~wr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (487)
..+..+|..+|.++...+..+ ..|.. .|+..+.+..+.+++..+..++.++. ++......
T Consensus 182 v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~---------- 249 (480)
T KOG2563|consen 182 VMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAA---------- 249 (480)
T ss_pred HhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhh----------
Confidence 999999999999888887754 34654 45555555444444444444442221 11111110
Q ss_pred cCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccc
Q 011369 284 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 363 (487)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 363 (487)
.+..++.+..++.++|+++....+.+......+++..+.+...+.. .++
T Consensus 250 ------------------------------~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY 298 (480)
T KOG2563|consen 250 ------------------------------LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGY 298 (480)
T ss_pred ------------------------------hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccC
Confidence 0112355778899999999999988888887777777666544433 234
Q ss_pred cccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHh
Q 011369 364 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSLYGFLALFTVGELLVF 438 (487)
Q Consensus 364 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 438 (487)
+.... .......+++.++.+++|.+.||.++.+ ...........+..+.+... ...+.......+.|++..
T Consensus 299 ~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~ 374 (480)
T KOG2563|consen 299 EGVFAGYIGALMIVAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGT 374 (480)
T ss_pred CccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhc
Confidence 43333 5556667889999999999999998764 22333333333331222221 123444555566777778
Q ss_pred ccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhc
Q 011369 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (487)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (487)
+..|...-+..|...|..-++..|..+...+..+
T Consensus 375 ~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~ 408 (480)
T KOG2563|consen 375 GYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFG 408 (480)
T ss_pred CCCCcceeeeeeeccccCCcccceeEEeehhHHH
Confidence 8888888899999888777777776644444443
No 112
>PRK09848 glucuronide transporter; Provisional
Probab=99.78 E-value=7.9e-19 Score=171.26 Aligned_cols=325 Identities=10% Similarity=-0.018 Sum_probs=206.2
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc----CCCeEe-hhHHHHHHHHHHHh-h----cch--hHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH----NPFRLI-GVGLSVWTFATAGC-G----SSF--DFWSI 173 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~----~a~--~~~~l 173 (487)
+.+.+.+|++..++|.+.++..+..++..++.|+++||. ||||.. +.+.+...+..++. . .++ ....+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 446777899999999999999999999999999999996 666644 55555444433332 1 122 23334
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCC-CchhHHHHHHHhhh-----hhhhhhHHHHHHhhcccc--chHHHHHHHHHH
Q 011369 174 AICRMLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCI-----PTGVALGYVYGGVVGSHL--NWRYAFWGEAIL 245 (487)
Q Consensus 174 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~-----~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~ 245 (487)
++.-++.+++.+...+...++..+.... ++|.+..++-..+. .++..++|.+++...... +|.....+.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~ 192 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIA 192 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 5556777888888888888887777654 67888766655433 345556666665432211 122122233333
Q ss_pred HHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHh
Q 011369 246 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 325 (487)
Q Consensus 246 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (487)
+++..++.....||.... +.++ .+..+.++.
T Consensus 193 ~~~~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~~~~~~~ 223 (448)
T PRK09848 193 GMVLYFICFKSTRENVVR----IVAQ---------------------------------------------PSLKISLQT 223 (448)
T ss_pred HHHHHHHHHcCcEeccCC----CccC---------------------------------------------CCHHHHHHH
Confidence 333333333333432110 0000 011234677
Q ss_pred hhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeece-eecccchhhhhhhhhHhhhcccchhhhHHHH
Q 011369 326 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGV-TIVCGIVGTISGGFILDQMGATISNAFKLLS 404 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 404 (487)
+++||.++...+..++...+......+.|.|+++..+.+.....+... ..++.+++.++.+++.||+++| +.+.
T Consensus 224 l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~ 298 (448)
T PRK09848 224 LKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFL 298 (448)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHH
Confidence 889999998888877777777777777888888887766543322222 2355677888899999999988 6666
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCC-------CchhHHHHHHHHHHHhhcCCC
Q 011369 405 AATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~r~~~~g~~~~~~~~~g~~~ 475 (487)
.+..+..+..+..... .+.+...+..++.+++.+...+.......+..+. +.+|...|+. ...+.+|..+
T Consensus 299 ~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~-~~~~klg~ai 377 (448)
T PRK09848 299 IGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF-SFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH-HHHHHHHHHH
Confidence 6666555544444332 2344445556667777777777667777776654 3468888886 6677778888
Q ss_pred ccceeeeeec
Q 011369 476 SSPLVGVLQV 485 (487)
Q Consensus 476 ~p~~~g~l~~ 485 (487)
|+.+.|.+.+
T Consensus 378 g~~i~g~~l~ 387 (448)
T PRK09848 378 GGSIPAFILG 387 (448)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.74 E-value=8.7e-19 Score=158.17 Aligned_cols=325 Identities=14% Similarity=0.072 Sum_probs=252.9
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeE-ehhHHHHHHHHHHHhhcchh---HHHHHHHHHHhhhhhhhhhhh
Q 011369 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL-IGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISL 190 (487)
Q Consensus 115 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~a~~---~~~l~~~r~l~G~g~g~~~~~ 190 (487)
+.+..+...++..+..++.+|+.|.++|+.|+||. +-+...+..++.++..++++ ++..++.-++..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 34566888899999999999999999999997665 44555555666666666654 445566777888999999999
Q ss_pred hhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHH--Hh-hc---------------cccchHHHHHHHHHHHHHHHHH
Q 011369 191 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GV-VG---------------SHLNWRYAFWGEAILMLPFAVL 252 (487)
Q Consensus 191 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~--~~-l~---------------~~~~wr~~f~~~~~~~~~~~~~ 252 (487)
..+++.+..++++-++..++-.....+|..+.-++. .. .. +...=|..+.+.++..++..+.
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 999999999998888888777777777776655443 11 11 2345788899999888888888
Q ss_pred HhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhH
Q 011369 253 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 332 (487)
Q Consensus 253 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (487)
.++..|+.++... ++ ++ ......++.+..++++.+++.+
T Consensus 216 m~~~v~~~~~~~~-~~--~~--------------------------------------~l~~g~k~L~~t~k~i~~~~~i 254 (438)
T COG2270 216 MILNVHDAEKISS-PP--PT--------------------------------------ALRNGFKELKSTFKEIRGRKNL 254 (438)
T ss_pred HHhcccccccccc-cc--hH--------------------------------------HHHHHHHHHHHHHHHHhcccch
Confidence 7777765332110 00 00 0114456667788888899999
Q ss_pred HHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHH
Q 011369 333 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 411 (487)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 411 (487)
..+.+..+++.=+...+......|..+.+|++..+. .+.....+.+++|+++.|++.||+|.| +++.++.++..
T Consensus 255 ~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~ 329 (438)
T COG2270 255 VLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILS 329 (438)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHH
Confidence 999999998888888888888889998899998777 566667789999999999999999999 67777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 412 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
+.++..........++++..+.+.+.+..+...-++..+.+|+++-++..|++ ......+..+||.+.+.+.|.
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgly-altgra~S~~gp~lv~v~t~i 403 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLY-ALTGRAASFLGPFLVAVITQI 403 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehh-hhhhhHHHHHHHHHHHHHHHH
Confidence 77777777776777777778888889999999999999999999999999997 667777889999999887764
No 114
>PRK11462 putative transporter; Provisional
Probab=99.73 E-value=1.7e-17 Score=161.37 Aligned_cols=321 Identities=13% Similarity=0.038 Sum_probs=197.9
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCCe-EehhHHHHHHHHHHHhhcchh------HHHHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAI 175 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~a~~------~~~l~~ 175 (487)
...+..|+++..+|.+..+.-+--++..|+.|.++|| +|||| .++++.+..+++.+++-..++ +..+++
T Consensus 35 fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 35 FYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAI 114 (460)
T ss_pred HHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHH
Confidence 3556779999999999999999999999999999996 68765 455676777777766654442 455666
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-------cchHHHHHHHHHHHH
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILML 247 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~~wr~~f~~~~~~~~ 247 (487)
.-++..++.......-.++..|..+ ++||.+..++...+..+|..+++.+...+... .+|+....+.+++.+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~ 194 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAF 194 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHH
Confidence 7777788888888889999999987 78999999999999999888877665444322 368888888887766
Q ss_pred HHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhh
Q 011369 248 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 327 (487)
Q Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (487)
+..++.++..+|..+. ++.+ .+..+.++..+
T Consensus 195 i~~~i~~~~~kE~~~~----~~~~---------------------------------------------~~~~~~l~~~~ 225 (460)
T PRK11462 195 MMLAFCFFTTKERVEA----PPTT---------------------------------------------TSMREDLRDIW 225 (460)
T ss_pred HHHHHHHhcceeccCC----CccC---------------------------------------------CCHHHHHHHHh
Confidence 6665555544442111 0000 00123456677
Q ss_pred cchhHHHHHHHHHHHHhhhe---eeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHH
Q 011369 328 QEKVYVVNVLGYIAYNFVIG---AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS 404 (487)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 404 (487)
+||.++......++...... +...|...|. .+.+.....+.....++++++.++++++.||+++| +...
T Consensus 226 ~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~---~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~ 297 (460)
T PRK11462 226 QNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI---LGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFW 297 (460)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHH
Confidence 88887776555444433322 2333333333 33222222333455577788899999999999987 4443
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-------CCchhHHHHHHHHHHHhhcCCC
Q 011369 405 AATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVP 475 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~ 475 (487)
....+..+..+..... .+.....+..++.+++.+...+....+..+..+ .+..|...+.. ....-+|..+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~-~f~~Klg~al 376 (460)
T PRK11462 298 WTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGT-LFVLKLGLAF 376 (460)
T ss_pred HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHH-HHHHHHHHHH
Confidence 3322222222222221 222223333444555544444333444444443 23334444553 4556667777
Q ss_pred ccceeeeeec
Q 011369 476 SSPLVGVLQV 485 (487)
Q Consensus 476 ~p~~~g~l~~ 485 (487)
++.+.|++.+
T Consensus 377 g~~i~g~iL~ 386 (460)
T PRK11462 377 GGALIGWMLA 386 (460)
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 115
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.71 E-value=2.8e-18 Score=158.66 Aligned_cols=330 Identities=15% Similarity=0.114 Sum_probs=215.8
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHH--HHH-HHhhcc----hhHH-HHHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT--FAT-AGCGSS----FDFW-SIAICRML 179 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~--~~~-~~~~~a----~~~~-~l~~~r~l 179 (487)
+.++.|+|.+++|.+.++..+...+.+++.|.++||+|.||-++..+.+.. .+. +...+. .|++ ..+++-+.
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~ 113 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIY 113 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTT
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445589999999999999999999999999999999997776554433222 122 222222 2322 23334444
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
.|+......|+.-+++.++. ++.+.=.|-.....++|.+++..++|.+.+ .+-+..||+..+.+++..++.++..|+
T Consensus 114 l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~ 190 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPD 190 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---
T ss_pred HHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCc
Confidence 55555556666666666654 234455666778888999999999998886 455788888777666666655555444
Q ss_pred ccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHH
Q 011369 260 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (487)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (487)
..+.....+..+. ++.....++..+++|+|++|.+.+..
T Consensus 191 ~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~l~k~~~fw~~~l~v 229 (412)
T PF01306_consen 191 VPPQAEVADALGA-----------------------------------------KKDKVSLKDVLSLFKMRNFWFFVLFV 229 (412)
T ss_dssp SSSSS-SSTTSSS-----------------------------------------------HHHHHHHTTSHHHHHHHHHH
T ss_pred Cchhhhhhccccc-----------------------------------------CCCCCcHHHHHHHhcchhHHHHHHHH
Confidence 2221111110000 00000124567789999999988876
Q ss_pred HHHHhhheeeeecccceeeeccccc---ccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH
Q 011369 340 IAYNFVIGAYSYWGPKAGYNIYHMS---NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (487)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (487)
......+..+....|.|....+... .... .+.++..+..++...+..++.+|+|.| +.++++..++.+=..
T Consensus 230 ~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~Lllag~i~~iRi~ 304 (412)
T PF01306_consen 230 IGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLLLLAGVIMAIRII 304 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHHHHHHHHHHHHHH
Confidence 6666556555444555554433221 1112 333455577788888999999999999 788888888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 416 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.....++.+.+...-.+-++-.........-++.+..|++..++...+.......+|.++.+.+.|.++|+
T Consensus 305 ~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~ 375 (412)
T PF01306_consen 305 GSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDR 375 (412)
T ss_dssp HHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhh
Confidence 77778888888888888888888887778888899999999889888865666777888888888988875
No 116
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=1.4e-16 Score=128.99 Aligned_cols=139 Identities=29% Similarity=0.390 Sum_probs=127.6
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCC
Q 011369 121 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 200 (487)
Q Consensus 121 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 200 (487)
++.+.+.++..++.++.|++.||+|||+.+..+..+..++.+....+++++.+.+.+++.|++.+...+....++.|.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 45567788999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 201 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 201 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
+++|++..++.+....+|..+++.+++.+.+..+|++.|++.+++.++..+..++..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999998999999999988887777777666554
No 117
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.69 E-value=1.7e-16 Score=144.08 Aligned_cols=327 Identities=12% Similarity=0.032 Sum_probs=224.1
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC-----CCeEe-hhHHHHHHHHHHHhhcc-----h-------h
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLI-GVGLSVWTFATAGCGSS-----F-------D 169 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-----rr~~l-~~~~~~~~~~~~~~~~a-----~-------~ 169 (487)
+..|++++..-.+...+...+.. ...+.+|..+|+.+ ||..+ ..|.++...+..+..++ . +
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 56789999888888888887766 46999999999998 77654 45555555555544432 2 1
Q ss_pred --HH--HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch-HHHHHH--H
Q 011369 170 --FW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW-RYAFWG--E 242 (487)
Q Consensus 170 --~~--~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w-r~~f~~--~ 242 (487)
.+ ...++-.+.|+|.+...+...+++.|..|+|+|+++.++......+|.+++..+.+.+.+.+.- |..-.+ .
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 22 2355567789999999999999999999999999999999999999999999999988877653 222222 2
Q ss_pred HHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHH
Q 011369 243 AILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD 322 (487)
Q Consensus 243 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (487)
+++.++..++..+- .|.......+.++ ++...+.+.
T Consensus 165 a~i~~~l~~ia~wg-~E~r~~~~~~~~~-------------------------------------------~~~~~f~~a 200 (403)
T PF03209_consen 165 ALIALLLNLIALWG-QEPRRSRRAAAAE-------------------------------------------RPRPPFREA 200 (403)
T ss_pred HHHHHHHHHHHHHh-cccCCcccccCCC-------------------------------------------CCCccHHHH
Confidence 22222222222222 2211111110000 001112244
Q ss_pred HHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhh-hcccchhhh
Q 011369 323 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAF 400 (487)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~ 400 (487)
++++..+|....+....++...++......+-.|--+.++++..+. .+......+..+|....|++..| .+++
T Consensus 201 ~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~----- 275 (403)
T PF03209_consen 201 WRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK----- 275 (403)
T ss_pred HHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----
Confidence 5666677777777777777777777777788889999999997776 66677778888888888888763 4433
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcc
Q 011369 401 KLLSAATFLGAISCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 401 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
+...+++..++.+..+. ....+.+.+....++.|++.+..........++...++..|..+|. +...+..+..++.
T Consensus 276 ~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~-WGaaQA~A~Glg~ 354 (403)
T PF03209_consen 276 RTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGA-WGAAQAIARGLGT 354 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHH-HHHHHHHHHHHHH
Confidence 33444444444443333 3344567777778888888887777777778888888999999999 5777777777888
Q ss_pred ceeeeeec
Q 011369 478 PLVGVLQV 485 (487)
Q Consensus 478 ~~~g~l~~ 485 (487)
.++|.+.|
T Consensus 355 ~~GG~~~D 362 (403)
T PF03209_consen 355 FLGGALRD 362 (403)
T ss_pred HHHHHHHH
Confidence 88777766
No 118
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1e-15 Score=143.07 Aligned_cols=328 Identities=10% Similarity=0.023 Sum_probs=242.2
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCC-eEehhHHHHHHHHHHHhhcchh------HHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAIC 176 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~a~~------~~~l~~~ 176 (487)
..+.+|+++..+|.+..+.-+--++..|+.|.+.|| +||+ +.++.+.+..++.+.++-.+++ ....++.
T Consensus 39 YTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vt 118 (467)
T COG2211 39 YTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVT 118 (467)
T ss_pred HhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHH
Confidence 456679999999998888888889999999999996 6765 4677787888998888887773 5556777
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhc-----c--ccchHHHHHHHHHHHHH
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVG-----S--HLNWRYAFWGEAILMLP 248 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-----~--~~~wr~~f~~~~~~~~~ 248 (487)
-++.+++-......-.++..|+.+ ++||.+..++-+.+..+|..+...+...+. + ..||+..-++.++++.+
T Consensus 119 Y~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i 198 (467)
T COG2211 119 YMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVI 198 (467)
T ss_pred HHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHH
Confidence 888899999999999999999986 689999999999999998776555544433 2 45899999999999888
Q ss_pred HHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhc
Q 011369 249 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 328 (487)
Q Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (487)
..+.+++-.+|...+..+.++. ...+..+++..+++
T Consensus 199 ~~l~~~~~v~ER~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~~ 234 (467)
T COG2211 199 LLLFCFFNVKERVVETQPTKTG--------------------------------------------VKLKLKDSFLLIFK 234 (467)
T ss_pred HHHHHHHHhhcccCccccCccc--------------------------------------------ccccHHHHHHHHHc
Confidence 8888888776643321111110 01122234556789
Q ss_pred chhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHH
Q 011369 329 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 407 (487)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 407 (487)
||.+...++..++...+..........|.+...+.+.... ........+.+.+.++..++.+|+|+| +...++.
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~~ 309 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIGL 309 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHHH
Confidence 9999998888888877777777777777777666665444 333344455566688999999999999 7888888
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCeeEEEEeecC-------CCchhHHHHHHHHHHHhhcCCCccc
Q 011369 408 FLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSP 478 (487)
Q Consensus 408 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~g~~~~~~~~~g~~~~p~ 478 (487)
++.++..+.....+ +.+..++..++.+++.+...+...+++++.++ .+..|...|.. .+..-+|.+++..
T Consensus 310 ~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~-tF~~K~g~ala~~ 388 (467)
T COG2211 310 LLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM-TFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH-HHHHHHHHHHHHH
Confidence 87777777666654 45556666688888888888877777777653 24556777775 5666667777777
Q ss_pred eeeeeec
Q 011369 479 LVGVLQV 485 (487)
Q Consensus 479 ~~g~l~~ 485 (487)
+.|++.+
T Consensus 389 ~~g~~L~ 395 (467)
T COG2211 389 IPGWILG 395 (467)
T ss_pred HHHHHHH
Confidence 7776654
No 119
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.64 E-value=1.9e-15 Score=139.97 Aligned_cols=372 Identities=12% Similarity=0.118 Sum_probs=218.2
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGE 184 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~ 184 (487)
..+.+|+++++..-+.++|.--.-...+++|+++||+ |+|+.++.|.++..+|-++.+.+. +...++++-++.++|.
T Consensus 52 ~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~ 131 (498)
T COG3104 52 LGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGT 131 (498)
T ss_pred ccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcc
Confidence 3444669999988888888888889999999999996 999999999999999999999984 7889999999999999
Q ss_pred hhhhhhhhhhhhhcCCCC--chhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccC
Q 011369 185 ASFISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 262 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~ 262 (487)
|.+-+...+++.|.+|++ +|-..+++++.+.++|+.++|++.+++.+++||+..|.+.++-....++.. ...+++..
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f-~~~~r~~~ 210 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIF-LLGRRHVK 210 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH-HHccchhc
Confidence 999999999999999864 477889999999999999999999999999999999999877655544443 33344333
Q ss_pred CCCCCCcccchhhcccccCcccCCC--cccc-cccchhhhhhhhhcc---ccccc-hhhhhh--hhhHHHHhhhc-chhH
Q 011369 263 GFAPAESGKAQVVASVSEGSEASNL--NDHV-SEDISDQASERSIKS---IGESR-FLNQLS--QFSQDTKVLLQ-EKVY 332 (487)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~---~~~~~-~~~~~~--~~~~~~~~~~~-~~~~ 332 (487)
.....++......+........... .... ......+........ ..... ..+..+ +.....++++. -+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lf 290 (498)
T COG3104 211 GIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLF 290 (498)
T ss_pred CCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHH
Confidence 2222221111111000000000000 0000 000000000000000 00000 000000 00011111110 1122
Q ss_pred HHHHHHHHHHHhhheeeeecccceeeec-ccccccceeeeceeecccchhhhhhhhhHhhhcccc--hhhhHHHHHHHHH
Q 011369 333 VVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATI--SNAFKLLSAATFL 409 (487)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~~~~~~~~ 409 (487)
....+.+.++.-....+..|.-...+.. +|++.....+-++..+.-++..++..++..|+++++ +....-+..+..+
T Consensus 291 l~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l 370 (498)
T COG3104 291 LFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLIL 370 (498)
T ss_pred HHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHH
Confidence 2222222222222222222222222222 233322223444555556667777777777754442 2111223333333
Q ss_pred HHHHHHHHHHH----------HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccce
Q 011369 410 GAISCLTAFCL----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (487)
Q Consensus 410 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~ 479 (487)
+....+.+... .+.++.+...++..++.-...|....++.+..|+...+..++.. ...+..|..++..+
T Consensus 371 ~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~w-fLt~a~~~~l~g~v 449 (498)
T COG3104 371 AGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMW-FLTVAAGQTLGGQV 449 (498)
T ss_pred HHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHhhcee
Confidence 33333333222 13566777778888888777888899999999999999999985 66666676666665
Q ss_pred ee
Q 011369 480 VG 481 (487)
Q Consensus 480 ~g 481 (487)
.+
T Consensus 450 a~ 451 (498)
T COG3104 450 AG 451 (498)
T ss_pred cc
Confidence 55
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.60 E-value=7.9e-15 Score=141.22 Aligned_cols=145 Identities=16% Similarity=0.215 Sum_probs=127.7
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch----hHHHHHHHHHHhhhhhhhhhhhh
Q 011369 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLA 191 (487)
Q Consensus 116 ~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~----~~~~l~~~r~l~G~g~g~~~~~~ 191 (487)
.++.+...++..++..++.++.|+++||+|||+++.++.++.+++..+..... +++.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999988876666532 35677889999999999888999
Q ss_pred hhhhhhcCCCCchhHHHHHHH-hhhhhhhhhHHHHHHhhccc------cchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 192 APFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
..++.|++|+++|++++|+.+ ...++|..+||+++|.+.++ +||+..|.+.+++.++..++.+++.+|+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999997 67889999999999999877 4699999999999888888888887764
No 121
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=5.3e-14 Score=133.98 Aligned_cols=314 Identities=13% Similarity=0.093 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh--hhhhhhhhhhhhhcCCCCch
Q 011369 127 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE--ASFISLAAPFIDDNAPVPQK 204 (487)
Q Consensus 127 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~--g~~~~~~~~~i~~~~~~~~r 204 (487)
.+...+.++..|.++||+|||..+....+...+..+...+.. |++++ +.|+.. +.......++++|....++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YWFFL---LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HHHhh---hcccccchhhhhhhhhhheeeccchhHH
Confidence 577788999999999999999999999999888888777766 33333 444432 34667788999999999999
Q ss_pred hHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCccc
Q 011369 205 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 284 (487)
Q Consensus 205 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (487)
....++.......+..++|.+++.+....|.-.+|.+..+..++..+...+.+||+..+..+++........ .
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~-------~ 219 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTP-------G 219 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCC-------C
Confidence 999999999999999999999999999999999999999999999888888889876554333100000000 0
Q ss_pred CCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhh-eeeeecccceeeecccc
Q 011369 285 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI-GAYSYWGPKAGYNIYHM 363 (487)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~ 363 (487)
... .....+..+..+..-.+|..+..++..+...... ....-..+.|+...+++
T Consensus 220 ~~~-------------------------~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w 274 (463)
T KOG2816|consen 220 SLD-------------------------SSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGW 274 (463)
T ss_pred ccc-------------------------chhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCc
Confidence 000 0011111122222223455555444444443333 22231447788889999
Q ss_pred cccce-eeeceeecccchhhhhhh-hhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 011369 364 SNADM-MFGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQ 441 (487)
Q Consensus 364 ~~~~~-~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (487)
+.... .+.+.......++.++.. .+...++.+ +....+...-.+..+......+.|..+... +.........
T Consensus 275 ~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~-v~~~~~~~~~ 348 (463)
T KOG2816|consen 275 NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAG-VVVALAGIVF 348 (463)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHH-HHHHhhcchh
Confidence 87766 455566666667776666 667777777 655566555555555555555555444433 3344455677
Q ss_pred CCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 442 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 442 ~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
+...+.....+.++.+|.+.++. .....+..+++|.+.+.+.
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~i-s~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGII-SGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred HHHHhHHHhhcccccccchhhHH-HHHHHHhhhhhHHHHHHHH
Confidence 77888888899999999999997 7777778888888777653
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.57 E-value=2e-13 Score=122.26 Aligned_cols=259 Identities=12% Similarity=0.118 Sum_probs=168.0
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
+++.+.+-.++...+.+...-. ..+-+++|.++.|++.+....+....+..++.|.++|
T Consensus 36 qr~yl~vY~La~~aDWLQGpY~---------------------Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD 94 (354)
T PF05631_consen 36 QRKYLLVYLLAMAADWLQGPYL---------------------YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLAD 94 (354)
T ss_pred HHHHHHHHHHHHHHHHhhcchh---------------------HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666666666544322 2244679999999999999999999999999999999
Q ss_pred hcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhh-hhc----CCCCchhHHHHHHH-hhhh
Q 011369 143 SHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFI-DDN----APVPQKTAWLSMFY-MCIP 216 (487)
Q Consensus 143 r~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i-~~~----~~~~~r~~~~~~~~-~~~~ 216 (487)
|+|||+.-++.++++++.++ +-..+|++.++++|++.|++.+....+--+++ .|. +|++..+..++... ...+
T Consensus 95 ~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~ 173 (354)
T PF05631_consen 95 RYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNG 173 (354)
T ss_pred hcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhH
Confidence 99999999999999998886 55568999999999999999999998887764 555 23333344444333 3334
Q ss_pred hhhhhHHHHHHhhccccch--HHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCccccccc
Q 011369 217 TGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 294 (487)
Q Consensus 217 ~G~~~g~~~~~~l~~~~~w--r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (487)
+-.+++.+++..+.+..+. ..+|....++.++..+++....+|...+ +++...
T Consensus 174 ~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~---~~~~~~---------------------- 228 (354)
T PF05631_consen 174 VVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD---TSSSSS---------------------- 228 (354)
T ss_pred HHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC---cccccc----------------------
Confidence 4455666666677665544 7888888777766666655444442211 111100
Q ss_pred chhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhhe-eeeecccceeeecccccccceeeece
Q 011369 295 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG-AYSYWGPKAGYNIYHMSNADMMFGGV 373 (487)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~ 373 (487)
..++..+..+.+.++|+++...+...+.-..++ .+..|.|..-.+..+.+ .. .+.+.
T Consensus 229 --------------------~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P-~G-lIFss 286 (354)
T PF05631_consen 229 --------------------LSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELP-LG-LIFSS 286 (354)
T ss_pred --------------------hHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCC-ch-HHHHH
Confidence 011222445667788888888887776655555 44556776552211111 11 23333
Q ss_pred eecccchhhhhhhhhHh
Q 011369 374 TIVCGIVGTISGGFILD 390 (487)
Q Consensus 374 ~~~~~~~~~~~~g~l~d 390 (487)
+.++..+|+.+..++..
T Consensus 287 FM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 287 FMVAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44555566655544443
No 123
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.55 E-value=6.6e-14 Score=134.20 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=126.1
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~ 186 (487)
.+++++|.++.+.+++.+...++..++.+++|+++||+|||+.+..+.+...+.......+++.+.+++.+++.+++.+.
T Consensus 242 ~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGI 321 (393)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 35677899999999998888888888999999999999999988777666665555555677888888999999998888
Q ss_pred hhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
..+....+..|.+|+ +|++++++++....+|..+++.+++.+.+++||+..|++.+++.++..+..++.
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 778788888999985 699999999999999999999999999999999999999888777666555544
No 124
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.55 E-value=1.6e-14 Score=139.98 Aligned_cols=147 Identities=10% Similarity=0.043 Sum_probs=130.0
Q ss_pred cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhh
Q 011369 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLA 191 (487)
Q Consensus 112 ~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~ 191 (487)
.+.+..+.|++.++..++..++.+++|+++||+|||+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666788999999999999999999999999999999999999999998999999999999999999999998888888
Q ss_pred hhhhhhcCCCCchhHHHHH-HHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 192 APFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 192 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
..++.|.+|++.|+...+. ++....+|.++++++.|.+.+..|||..|++.+++.++..++.++..+
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999998887655 667788999999999999999999999999998887776666655543
No 125
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.54 E-value=1.5e-13 Score=126.59 Aligned_cols=348 Identities=10% Similarity=0.006 Sum_probs=224.5
Q ss_pred Cccccc-cccCccccc-hhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 011369 106 SGIQGD-FKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~-~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g 183 (487)
|.+.+. .|++..|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++...+-+..++-|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 445554 788887763 445566667788889999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc--ccchHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
.+ ...+.++++-...++++-.++.+...++..+|..++.++|..+.. ..+.+...++......+..+..++++ ...
T Consensus 108 ~a-~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP-~~~ 185 (412)
T PF01770_consen 108 TA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLP-MPK 185 (412)
T ss_pred HH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 88 467788999889999999999999999999999999999998875 34566676666655555555555554 322
Q ss_pred CC--CCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHH
Q 011369 262 KG--FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 339 (487)
Q Consensus 262 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (487)
+. .++....+....+...+..++. .+......+.+...........+..++++++..++|.++...+-+
T Consensus 186 ~S~~f~r~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWW 256 (412)
T PF01770_consen 186 RSLFFHRKPPAEQDANESESDKMNES---------PESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWW 256 (412)
T ss_pred cccceeccCccccccccccccccccc---------cccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 11 1111110000000000000000 000000001111111112244566778888889999988888887
Q ss_pred HHHHhhheeeeecccceeeeccccccccee---eeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHH
Q 011369 340 IAYNFVIGAYSYWGPKAGYNIYHMSNADMM---FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 416 (487)
Q Consensus 340 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (487)
.+...++.-+.+|.....++....+..... +-+...+.+.++.+..|++-.++.+... ..+.....+.+..+++
T Consensus 257 a~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~---l~l~~~S~l~a~~L~l 333 (412)
T PF01770_consen 257 AFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGE---LALGVFSLLQAGLLFL 333 (412)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHH---HHHHHHHHHHHHHHHH
Confidence 777777776666666555544111111112 2234445566666777776444433211 3444555555566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHH
Q 011369 417 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 467 (487)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~ 467 (487)
....++.|...+..++++..+....+....-++.....+.-|...|++...
T Consensus 334 m~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 334 MSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHH
Confidence 667778888888777777777766666666666677677788888885333
No 126
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.54 E-value=2.5e-14 Score=136.65 Aligned_cols=144 Identities=12% Similarity=0.019 Sum_probs=126.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhH--HHHHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~g 183 (487)
+.+.++++.++.+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.++..+.++. ..+++..++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 44567788888889999999999999999999999999999999999999988888877776643 3355677888998
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHH
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 249 (487)
.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.+.+.++.||++.|++.+++.++.
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 888888888999999999999999999999999999999999999999999999999988766554
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.53 E-value=9.9e-14 Score=136.80 Aligned_cols=156 Identities=10% Similarity=0.025 Sum_probs=119.2
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHH---hhcchhHHHHHHHHHHhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+++++|.+..+.++..+...++..++.+..|+++||+|||+++.++.++..++.+. ...+++...++++|++.|++.
T Consensus 277 l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 356 (490)
T PRK10642 277 LSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVIL 356 (490)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 44667888888888888889999999999999999999999888877654433322 223456788889999999988
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhccccccCC
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (487)
+........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.++++..+++++..+..+ +.||++++
T Consensus 357 ~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~ 435 (490)
T PRK10642 357 NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCC
Confidence 8777778889999999999999999754445566678888888877654 478887777666666555544 44887665
Q ss_pred C
Q 011369 264 F 264 (487)
Q Consensus 264 ~ 264 (487)
.
T Consensus 436 ~ 436 (490)
T PRK10642 436 P 436 (490)
T ss_pred C
Confidence 3
No 128
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.52 E-value=4.5e-13 Score=125.83 Aligned_cols=184 Identities=16% Similarity=0.137 Sum_probs=145.8
Q ss_pred cchhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCcccc-ccccCccccchhhhHHHHHHHHHHHHHHHhh
Q 011369 63 PKRLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLA 141 (487)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~ 141 (487)
.||.+.+..+..++.....+++.... -|.+++ |.+.+.+..||+.++..++.+++++..|+..
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~----------------wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws 95 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSM----------------WPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWS 95 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeec----------------chhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccc
Confidence 34567777777777776666554321 144444 5788889999999999999999999999999
Q ss_pred hhcCC-CeEehhHHHHHHHHHHHh-hc---ch-hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhh
Q 011369 142 KSHNP-FRLIGVGLSVWTFATAGC-GS---SF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCI 215 (487)
Q Consensus 142 dr~Gr-r~~l~~~~~~~~~~~~~~-~~---a~-~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 215 (487)
.|.+. |+.++.|.++..+++++. ++ .+ ..+.++++|++.|+|.| .......|+++....++|.++++....+.
T Consensus 96 ~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~ 174 (488)
T KOG2325|consen 96 NKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGF 174 (488)
T ss_pred cccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHH
Confidence 99986 888999999999999988 33 23 68889999999999988 55778999999888899999999999988
Q ss_pred hhhhhhHHHHHHhhccc----------c---chHHHHHHHHHHHHHHHHHHhhccccccCC
Q 011369 216 PTGVALGYVYGGVVGSH----------L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (487)
Q Consensus 216 ~~G~~~g~~~~~~l~~~----------~---~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (487)
.+|.++||.++..+..- . -+..+-|+++++.++..++..+...|..+.
T Consensus 175 vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 175 VLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 99999999888665521 1 135677888888888888888887775444
No 129
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.51 E-value=1.9e-13 Score=131.59 Aligned_cols=147 Identities=16% Similarity=0.136 Sum_probs=128.2
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhh
Q 011369 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 189 (487)
Q Consensus 110 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~ 189 (487)
++.|. .+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.+|.+.+++.+++.|++.+...+
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 34444 3456777888899999999999999999999999999888888888888888988899999999999998888
Q ss_pred hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
.....+.|.+|+++|+++.++++....+|..+++++.+.+.+..||++.|++.+++.++..+..++..+
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888888999999999999999999999999999999999999999999999998887776666655543
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=1.2e-13 Score=139.32 Aligned_cols=139 Identities=9% Similarity=-0.024 Sum_probs=121.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcC
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 199 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 199 (487)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34456777899999999999999999999999999999999999999998888999999999988889999999999999
Q ss_pred CCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
|.++|++++|+......+|.++||++++.+.+. +...+|++.+++.++.+++.+++ ||+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PET 736 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PDT 736 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CCC
Confidence 999999999999999999999999999988764 45678888887776665555544 764
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.49 E-value=4.2e-13 Score=129.88 Aligned_cols=154 Identities=18% Similarity=0.118 Sum_probs=137.2
Q ss_pred Cccccc-cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.++ +|.++.+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.|++.
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS 326 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 445455 8999999999999999999999999999999988888888888888888888888899888889999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
+...+...+++.|..|++.||++++++.....+|..+|+.+.|.+.+.+|++..+++.+++.++..++.....|+
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 888888889999999999999999999999999999999999999999999999999988877777777666655
No 132
>PRK12382 putative transporter; Provisional
Probab=99.49 E-value=4.9e-13 Score=128.37 Aligned_cols=145 Identities=12% Similarity=0.101 Sum_probs=127.8
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhh
Q 011369 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 189 (487)
Q Consensus 110 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~ 189 (487)
++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++..++.|++.+...+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence 344443 345667778888899999999999999999999999999999888888888988889999999999998888
Q ss_pred hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
.....+.|.+|+++|+++.++++....+|..++|.+++.+.++.||++.|.+.+++.++..++.++.
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 8888999999999999999999999999999999999999999999999999998877776665544
No 133
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.48 E-value=4e-13 Score=128.32 Aligned_cols=147 Identities=12% Similarity=0.169 Sum_probs=126.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~ 187 (487)
+.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.+..
T Consensus 226 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45778999999999888887778888999999999999999988887776666666667788888889999999999988
Q ss_pred hhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 188 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
.+....++.|..|+ ++++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..+
T Consensus 306 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 306 AGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 88888999999885 67799999999999999999999999999999999999998887666655443
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.48 E-value=1.3e-13 Score=133.21 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=125.6
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhc
Q 011369 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 198 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 198 (487)
.+.+.+++.++..++.+.+|+++||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+....++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45566677788889999999999999999999999988888888888888899999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
.|+++||+.+++......+|..+||.+++.+.+..||++.|++.+++.++..+..++..+
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~ 399 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLR 399 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988887776665543
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.48 E-value=6.8e-14 Score=136.45 Aligned_cols=146 Identities=14% Similarity=0.167 Sum_probs=123.2
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc--CCCeEehh--HHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIGV--GLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~~--~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (487)
|.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.++...+++++.+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 555577899999999999999999999999999999984 33433333 33444555566677889999999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHH
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~ 251 (487)
++.+...+...+++.|.+|++++++.+++++....+|..+||.++|.+.+.. +|++.|++.+++.++..+
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999877 599999999887665444
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.47 E-value=3e-13 Score=129.16 Aligned_cols=145 Identities=14% Similarity=0.031 Sum_probs=131.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
|...+|+|.++.+.|++.++..++..++.++++++.||+|+|+.+.++.++..+..++.++++|.+.+++.++++|+..+
T Consensus 229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence 44446799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHH-hhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 252 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~ 252 (487)
...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|++.++++++..++
T Consensus 309 ~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 309 VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999998 9999999999986 57789999999999999999996 6788887777655433
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.47 E-value=2.4e-13 Score=128.42 Aligned_cols=149 Identities=19% Similarity=0.168 Sum_probs=138.2
Q ss_pred Cccccc-cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCe-EehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 011369 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g 183 (487)
|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....++.+.+++..++.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~ 278 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFG 278 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 444444 4889999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHh
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..|++.+++.++..+..+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 279 LGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999999999999999999999999999999999998877666544
No 138
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.46 E-value=3.2e-13 Score=130.35 Aligned_cols=151 Identities=14% Similarity=0.063 Sum_probs=129.2
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
|.+.++.|.++.+.+++.+.+.++..++.++.|+++||+|||+.+..+.+...++.++..+.++.+.+.+.-++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 56667789999999999999999999999999999999999999888777777777777778888888888889999888
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhc
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
...+...+++.|.+|+++|++.+|+.+....+|..+||.+++.+.++. +|...+++.+...++..+..++.
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999999999998864 46666766666655555554444
No 139
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.45 E-value=8.7e-13 Score=126.89 Aligned_cols=148 Identities=13% Similarity=-0.042 Sum_probs=113.7
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEeh-hHHHH-------HHHHHHHhhcchhHHHHHHHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSV-------WTFATAGCGSSFDFWSIAICRM 178 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~-------~~~~~~~~~~a~~~~~l~~~r~ 178 (487)
.+.+++|.++.+.+++.+...++..++.++.|+++||+|||+... ..... ..+........++.+..+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVA 320 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHH
Confidence 355678989999999999999999999999999999999996211 11111 1112222222345555555555
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhh
Q 011369 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 179 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~ 255 (487)
+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..| |+..|++.+++.++..+..++
T Consensus 321 ~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 321 LGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 5555555 788999999999999999999999999999999999999999999988 999999998887766655443
No 140
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.44 E-value=5.7e-13 Score=132.25 Aligned_cols=143 Identities=13% Similarity=0.056 Sum_probs=114.9
Q ss_pred Cccc-cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc--hhHHHHHHHHHHhhh
Q 011369 106 SGIQ-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGV 182 (487)
Q Consensus 106 ~~i~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a--~~~~~l~~~r~l~G~ 182 (487)
|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++..++.++.... .+.+.+.+..++.+.
T Consensus 299 p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 299 PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 4444 6899999999999999999999999999999999999999888877766665544332 344455555555544
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHH
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 248 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 248 (487)
......+....++.|.+|+++|++++++.+....+|..+||.+++.+.+++||+..+...+....+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 443455667788999999999999999999999999999999999999999999888766654433
No 141
>PRK03699 putative transporter; Provisional
Probab=99.43 E-value=1.7e-12 Score=124.52 Aligned_cols=150 Identities=14% Similarity=0.132 Sum_probs=128.4
Q ss_pred Cc-cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SG-IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~-i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|. +++++|.+..+.+++.+.+.++..++.+..|+++||+|||+.+.....+..+..++....+|.+.+.+..++.|++.
T Consensus 229 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 308 (394)
T PRK03699 229 PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFS 308 (394)
T ss_pred HHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH
Confidence 44 44678999999999999999999999999999999999999998888877777777777788888888889999988
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+..++...++..|..| +++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+.....
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 309 SAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 8888888888888776 4567888999899999999999999999999999999999988877665544433
No 142
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=2.6e-12 Score=123.19 Aligned_cols=150 Identities=17% Similarity=0.143 Sum_probs=124.4
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH-HHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT-AGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+. ..+..+..++. .+....++.+.++++.++.|++.
T Consensus 230 ~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~ 308 (390)
T PRK03545 230 PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-LIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAI 308 (390)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH
Confidence 44566689999999999999999999999999999999998865 44444444443 33455678888889999999998
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+...+.....+.+..| ++|+++++++.....+|..+|++++|.+.+++|+|..|++.+++.++..+...+..
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 8777777888888877 68999999999999999999999999999999999999999988877666665554
No 143
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.41 E-value=3e-12 Score=122.71 Aligned_cols=154 Identities=12% Similarity=0.133 Sum_probs=123.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-SFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.+++|.+..+.++..+.+.++..++.+..|++.||+|||+.+.++..+..++.++... .++...+. -++.|++.
T Consensus 229 p~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~ 306 (393)
T PRK09705 229 PAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGL 306 (393)
T ss_pred HHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhc
Confidence 4455568999999999999999999999999999999999999998888877777665543 33322222 24568888
Q ss_pred hhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 185 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |+..|++.++..++..+....+.||++
T Consensus 307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8888877777777775 5789999999999999999999999999999875 888888888887777777677767643
No 144
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.40 E-value=1.9e-12 Score=127.03 Aligned_cols=150 Identities=12% Similarity=0.004 Sum_probs=117.3
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHH--HhhcchhHHHHHHHHHHhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA--GCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~--~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
.+++++|.+..+.++..+.+.++..++.+++|+++||+|||+.++....+..++.. .....++...+.+.+++.|++.
T Consensus 284 yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 284 YAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 46678999999999999999999999999999999999999887665544443322 2234456777778888888654
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh-hhhhHHHHHHhhcc------------ccchHHHHHHHHHHHHHHHH
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~------------~~~wr~~f~~~~~~~~~~~~ 251 (487)
..........+.|.+|+++||.+.|+.+....+ |..++|.+.|.+.+ ..+|+..|++.++..++..+
T Consensus 364 ~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~ 443 (467)
T PRK09556 364 FGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCIC 443 (467)
T ss_pred hhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHH
Confidence 433333446777999999999999999988886 77999999999998 57899999998777766655
Q ss_pred HHhhc
Q 011369 252 LAFVI 256 (487)
Q Consensus 252 ~~~~~ 256 (487)
..+++
T Consensus 444 ~~~~~ 448 (467)
T PRK09556 444 LMAIV 448 (467)
T ss_pred HHHHH
Confidence 54443
No 145
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.40 E-value=1.4e-12 Score=128.91 Aligned_cols=154 Identities=8% Similarity=-0.077 Sum_probs=124.4
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc-----ch------hHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SF------DFWSIA 174 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~------~~~~l~ 174 (487)
|.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.++.++ .+ +...+.
T Consensus 308 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (481)
T TIGR00879 308 PTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIV 387 (481)
T ss_pred HHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHH
Confidence 6677788998888899999999999999999999999999999999998888777766652 11 333333
Q ss_pred HHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHh
Q 011369 175 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 175 ~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
...++.+.......+....++.|.+|+++|++++++......+|.++++.+.+.+.++.+|++.|++.++++++.+++.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 388 FILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHh
Confidence 33333333333345667778899999999999999999999999999999999999888999999999988888777777
Q ss_pred hcccc
Q 011369 255 VIKPL 259 (487)
Q Consensus 255 ~~~p~ 259 (487)
++.||
T Consensus 468 ~~~~~ 472 (481)
T TIGR00879 468 FFLPE 472 (481)
T ss_pred eeccc
Confidence 66665
No 146
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.40 E-value=9e-12 Score=121.62 Aligned_cols=150 Identities=20% Similarity=0.217 Sum_probs=136.7
Q ss_pred Cccc-cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQ-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~-~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+. +++|.++...|++.+++.+|..++++..+++.+|+++++.+..+.++++++.+..+++++.+..+++-++.|++.
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~ 321 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAW 321 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 5554 568999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
....+...+.+.+..|++.|||+++++++....+..+|.++.|.+.+.+|-+..+.+.++..++..++...
T Consensus 322 ~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 322 IIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998887765555544443
No 147
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.38 E-value=3.8e-12 Score=121.62 Aligned_cols=145 Identities=10% Similarity=0.076 Sum_probs=122.1
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
|...++.|.++.+.+++.+.+.++..+++++.|++.||+|+|+++..+.++..++.+... + ...+....++.|++..
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence 555566788988999999999999999999999999999999999888888777665443 2 2344567788888888
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
...|....++.|..|+++++...+.+....++|..+||.++|.+.++.+|++.|.+.+++.++..+..
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 368 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLML 368 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 88899999999999988888888888889999999999999999999999999999888776554433
No 148
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.36 E-value=1e-12 Score=126.36 Aligned_cols=139 Identities=8% Similarity=-0.008 Sum_probs=114.0
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH--HHhhc--chhHHHHHHHHHHhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGVG 183 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--a~~~~~l~~~r~l~G~g 183 (487)
+++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. +...+ .++.+.+++..++.|++
T Consensus 246 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 325 (394)
T TIGR00883 246 LTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALI 325 (394)
T ss_pred HHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 447788999999999999999999999999999999999998775554443333 12222 35677778888999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHH-HhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHH
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMF-YMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILM 246 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~ 246 (487)
.+...+...+++.|.+|+++|+++.++. +.+..+|..++|.+++.+.++.| |++.++...+..
T Consensus 326 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 326 GGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred HHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 9999999999999999999999999984 56667899999999999999888 988877776544
No 149
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.35 E-value=1.5e-12 Score=125.77 Aligned_cols=136 Identities=13% Similarity=0.111 Sum_probs=115.9
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH-HHhhcchhHHHHHHHHHHhhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT-AGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..+.. ......++.+.+.+..++.|+..+
T Consensus 264 ~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (405)
T TIGR00891 264 YLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQ 343 (405)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHc
Confidence 3556789999999999999999999999999999999999999988877653332 233445677777777788888777
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHH
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGE 242 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~ 242 (487)
...+....++.|.+|+++|++++|+.+....+|..++|+++|.+.++.| |+..+...
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 344 GIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred cchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 7788888999999999999999999999999999999999999999888 88776654
No 150
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.35 E-value=1.3e-11 Score=118.73 Aligned_cols=149 Identities=15% Similarity=0.085 Sum_probs=119.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEeh-hHHHHHHHHHHHhh-----cchhHHHHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCG-----SSFDFWSIAICRML 179 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~-----~a~~~~~l~~~r~l 179 (487)
|.+.+++|.+..+.+++.+...++..++.+..|+++||+|||+.+. .+.+..+++.+... ..++.+.+++..++
T Consensus 246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (402)
T TIGR00897 246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA 325 (402)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 5566778999999999999999999999999999999999988764 33333333333322 23467778888999
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++..++.+|.
T Consensus 326 ~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 326 LGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9998887655 4456677655 6899999999999999999999999999999999999999998887777666654
No 151
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.33 E-value=5.8e-13 Score=127.98 Aligned_cols=339 Identities=15% Similarity=0.089 Sum_probs=207.3
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc---C--CCeEehhHHHHHHHHHHHhhcc----hhHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH---N--PFRLIGVGLSVWTFATAGCGSS----FDFWSIAIC 176 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~---G--rr~~l~~~~~~~~~~~~~~~~a----~~~~~l~~~ 176 (487)
|.+++++|+++++...+.+...+... .-+++|.++|.+ | ||+-++++.++..++.+..+.. .+.....+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 77899999999999988888888775 467789999986 3 5556777777776655555543 357777777
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCC--CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHh
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
-++..+|......++-+++.|... +++||...+.......+|.+++..++|.+.+..++|+.|.+.+++..+..+..+
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence 888899999999999999999974 344888899999999999999999999999999999999999988887777777
Q ss_pred hccccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHH
Q 011369 255 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 334 (487)
Q Consensus 255 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (487)
++.+|. +.+ +.++.....+++. .......++..+..++.++.|.++.
T Consensus 173 ~~~~e~-~~~-~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~l~~~~~~~~i~~ 219 (433)
T PF03092_consen 173 FLLEER-KVR-PADEVFSFGKEEV-------------------------------PCLFGSFREQLSELWRALQQRAIWQ 219 (433)
T ss_pred Hhhhhc-ccc-ccchhhccccccc-------------------------------chhhHHHHHHHHHHHHHHhhhHHHH
Confidence 776651 111 1110000000000 0000113344456667777788777
Q ss_pred HHH-HHHHHHhhheeeeecccceeeeccc---ccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHH
Q 011369 335 NVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 410 (487)
Q Consensus 335 ~~~-~~~~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 410 (487)
..+ ..++............-.+..+..+ +++... .... +.+.++.+++..+-.++.+++..+ +++....++.
T Consensus 220 ~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~--~~~~-~vg~~~~l~g~~~y~~~~~~~~~R-~~~~~t~~~~ 295 (433)
T PF03092_consen 220 PILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFY--GTLS-IVGSIASLLGILLYRKYFSNWSWR-RIFVVTTLVS 295 (433)
T ss_pred HHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHH--HHHH-HHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHH
Confidence 665 3333332221111100011122222 333222 2222 334445555555555554443322 4555544444
Q ss_pred HHHHHHHH----------HHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcccee
Q 011369 411 AISCLTAF----------CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 480 (487)
Q Consensus 411 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~ 480 (487)
++..+.-. ..++.+..+.-..+........+.+...+..+..|+..-|+..++. .....+|..++..++
T Consensus 296 ~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall-~s~~Nlg~~~s~~lg 374 (433)
T PF03092_consen 296 VLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALL-ASFSNLGSSVSSTLG 374 (433)
T ss_pred HHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHH-HHHHHHHHHHHHHHH
Confidence 43332211 0122233333444455555556666677788999999999999997 556665666655554
Q ss_pred eee
Q 011369 481 GVL 483 (487)
Q Consensus 481 g~l 483 (487)
..+
T Consensus 375 ~~l 377 (433)
T PF03092_consen 375 AFL 377 (433)
T ss_pred HHH
Confidence 433
No 152
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.33 E-value=1.1e-11 Score=118.45 Aligned_cols=143 Identities=15% Similarity=0.083 Sum_probs=123.0
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~ 186 (487)
...+|.|.+..+.|++.+...++..+..++.|++.||+|+|+.+.++.++.+++.++.+.+++.+.+++..++.|++.+.
T Consensus 230 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 230 IYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTV 309 (382)
T ss_pred HHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 34467899999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred hhhhhhhhhhhcCCCCchhHHHHHHH-hhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 011369 187 FISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~ 251 (487)
..+....++.+. +++++++..+.+. ....+|..+||.++|.+.+.+|+ ..|+..+++.++..+
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 999999998887 5567788899886 55678889999999999999888 567777666554433
No 153
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=2.1e-11 Score=118.54 Aligned_cols=149 Identities=12% Similarity=-0.038 Sum_probs=107.5
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc--CCCeEe-hh---HHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLI-GV---GLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l-~~---~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (487)
+.+++|.+..+.++..+.+.++..++.++.|+++||+ ++|+.. .. +..+..++..... ..+...+.+..+..|
T Consensus 270 l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g 348 (434)
T PRK11663 270 MSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP-FASYVMQAACFFTIG 348 (434)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc-cccHHHHHHHHHHHH
Confidence 4467899999999999999999999999999999999 333332 11 1121211112222 233334444444455
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
++...........+.|.+|+++|++++|+.+....+|..++|.+.+.+.++.||+..|++.+++.++..+..+...
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 349 FFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433222333456789999999999999999999999999999999999999999999999988877776665544
No 154
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.28 E-value=1.7e-11 Score=117.81 Aligned_cols=144 Identities=8% Similarity=0.044 Sum_probs=125.0
Q ss_pred ccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhh
Q 011369 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 192 (487)
Q Consensus 113 ~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~ 192 (487)
+.+....|++.++..+...++.+..|++.||+|||+.+.++.++.+++..+.+.++|.+.+++.++++|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888999999999999999999999999999999999998888878889999999999999999887777777
Q ss_pred hhhhhcCCCCchhHHHHH-HHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 193 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
.++.+..+++.++...+. ++....+|..+++.++|.+.+..||+.+|.+.+++.++..++..+.
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~ 394 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVFT 394 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 788888888888877666 6788999999999999999999999999999999887777665543
No 155
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.27 E-value=1.8e-11 Score=120.97 Aligned_cols=155 Identities=9% Similarity=-0.020 Sum_probs=119.4
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--h-HH-HHHHHHHHhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--D-FW-SIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~-~~-~l~~~r~l~G 181 (487)
|.+.+++|.+.....+......+...++.++.|+++||+|||++++.+.++.+++.++.+... + .+ ....+-++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 667778888877777777788888999999999999999999999999999888877765431 1 11 2233344444
Q ss_pred hhhhh-hhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh------hccccchHHHHHHHHHHHHHHHHHHh
Q 011369 182 VGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 182 ~g~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
++.+. ..+....++.|.+|+++|++++|+......+|..+++.+.+. +.+.++|++.|++.+++.++.+++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 44443 336778999999999999999999999999998888655543 44678899999999988887777777
Q ss_pred hccccc
Q 011369 255 VIKPLQ 260 (487)
Q Consensus 255 ~~~p~~ 260 (487)
++.||+
T Consensus 455 ~~~~e~ 460 (479)
T PRK10077 455 KFVPET 460 (479)
T ss_pred hccccC
Confidence 666663
No 156
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=5.8e-11 Score=116.79 Aligned_cols=151 Identities=9% Similarity=0.040 Sum_probs=121.2
Q ss_pred CccccccccCccccchhhh-HHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHH---hhcc-hhHHHHHHHHHHh
Q 011369 106 SGIQGDFKLNNFQDGVLSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSS-FDFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s-~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~a-~~~~~l~~~r~l~ 180 (487)
|.+.+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.++..+. .+.. ++.+.+.+.-+++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 4456678999999999974 667899999999999999999998877666655544332 2333 4555566666776
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
.+..|...+...++..+..+++.+++..++.+...++|..++++++|.+.+..||+..|.+.++++++..+...+.
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666677788899999999999999999999999999999999999999999999999998888876666555
No 157
>PRK09952 shikimate transporter; Provisional
Probab=99.26 E-value=6.9e-11 Score=114.92 Aligned_cols=150 Identities=13% Similarity=0.050 Sum_probs=112.1
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc----chhHHHHHHHHHHhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----SFDFWSIAICRMLVGV 182 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----a~~~~~l~~~r~l~G~ 182 (487)
.+.+++|.+......+.....+...++.+++|+++||+|||++++.+.++..++.+.... .++.+.+++..++.|+
T Consensus 276 y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 355 (438)
T PRK09952 276 YSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANI 355 (438)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 345677887766555666666777888899999999999999988887766554433322 2334555566677788
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHh-hhhhhhhhHHHHHHhhcccc--chHHHHHHHHHHHHHHHHHHhhc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+.+...+...+++.|.+|++.|+...++.+. +..+|..++|.+.+.+.+.. +|+..+...++..++..+..+..
T Consensus 356 ~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 356 AHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888889999999999999988888544 45588999999999987643 58888888877777666655443
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.25 E-value=7.7e-11 Score=108.43 Aligned_cols=150 Identities=17% Similarity=0.097 Sum_probs=127.7
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc-chhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-SFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-a~~~~~l~~~r~l~G~g~ 184 (487)
|.+++..|.+.+.++++.-+|.++..+|....|+++|| +.|+.+.....+..+..+...+ .++.+..++.-++.|++.
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~ 314 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF 314 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 77888899999999999999999999999999999999 9999988887777776666555 455666677777788887
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+.........+++ ..++.+..+.++.....++|..+|..+||.+.+++|++...+..+++.++..++.++..
T Consensus 315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666666666777 33579999999999999999999999999999999999999999999888777766554
No 159
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.23 E-value=9.2e-11 Score=114.68 Aligned_cols=150 Identities=10% Similarity=-0.044 Sum_probs=106.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc--CCCeEeh-hHHHHHHHHHHHhhc--chhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIG-VGLSVWTFATAGCGS--SFDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~--Grr~~l~-~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G~ 182 (487)
++++.|.+..+.++..+.+.++..++.++.|+++||+ |||+... ....+..++.+...+ ..+.+.++++.++.|.
T Consensus 280 l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 359 (452)
T PRK11273 280 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGF 359 (452)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHH
Confidence 4555788888999999999999999999999999999 4554322 222223333222222 3345555555555565
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhh-hHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+..........+..|.+|+++||+++|+.+....+|.. ++|.+.+.+.++.||+..|++.++.+++.++....+.
T Consensus 360 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 360 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 44333333445678999999999999999888888765 5799999999999999999999887777666655443
No 160
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.22 E-value=1.3e-10 Score=112.35 Aligned_cols=149 Identities=15% Similarity=0.208 Sum_probs=131.6
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCC--eEehhHHHHHHHHHHHhhc--------chhHHHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICR 177 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------a~~~~~l~~~r 177 (487)
-.+++|++..+...+.-+..+...+|++++|++.||+|.| ++++++++++.+..+...+ .++-+.+++.-
T Consensus 308 a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a 387 (477)
T PF11700_consen 308 ATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLA 387 (477)
T ss_pred HHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHH
Confidence 5568999999999999999999999999999999999999 8999998888666666555 67888999999
Q ss_pred HHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhhc
Q 011369 178 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 178 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
++.|+..|..++...++.+|..|+++.+..+|++....-....+||++-+.+.+..| -|+.+....++.++.+++.+++
T Consensus 388 ~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 388 VLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999998765 8888888877766655555433
No 161
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=1.2e-10 Score=111.63 Aligned_cols=147 Identities=12% Similarity=-0.064 Sum_probs=115.0
Q ss_pred CccccccccCccccchhhhHHH-HHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc------chhHHHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRM 178 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a~~~~~l~~~r~ 178 (487)
+...+|.|.+++++|++..... ....++.++.|++.||+|+|+.+.++..+.++..+.... .++...++...+
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSA 311 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHH
Confidence 3344668999999999988876 466778899999999999999988877665333322211 234445556666
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCC-CchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHH
Q 011369 179 LVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 252 (487)
Q Consensus 179 l~G~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~ 252 (487)
+.+++.+...+.....+.+..++ +++++.+++.++..++|..+||.++|.+.++.||+..|++.+++.++..+.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 77777887878888887777776 889999999999999999999999999999999999999988776665443
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=1.2e-10 Score=113.52 Aligned_cols=152 Identities=10% Similarity=-0.060 Sum_probs=108.3
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHH---HHHHhhc--chhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF---ATAGCGS--SFDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~---~~~~~~~--a~~~~~l~~~r~l~G~ 182 (487)
+++..|.++.+.++..+.+.++..++.+.+|+++||+++|+....+..+..+ +.+.... ..+.+...+.-++.|+
T Consensus 278 l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 357 (438)
T TIGR00712 278 LKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGF 357 (438)
T ss_pred HHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 4445788999999999999999999999999999999765433334332221 1111112 2234444444455555
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhh-hhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTG-VALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G-~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
+.............|.+|+++|+++.|+.+....+| ..++|.+.|.+.++.||...|++.++..++..+..+++.||
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 358 LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 432222222346789999999999999998887776 57899999999999999999999888877777777777766
No 163
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.20 E-value=4.7e-11 Score=114.12 Aligned_cols=133 Identities=13% Similarity=0.008 Sum_probs=102.1
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHH---HHHHHHHhhc--chhHHHHHHHHHHhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV---WTFATAGCGS--SFDFWSIAICRMLVG 181 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~---~~~~~~~~~~--a~~~~~l~~~r~l~G 181 (487)
.+.+++|.++.+.+++.+.+.++..++.++.|+++||.++|+........ ..++...... ..+...+++..++.|
T Consensus 242 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 321 (379)
T TIGR00881 242 YLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALG 321 (379)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 35567899999999999999999999999999999986443332222211 1122222222 345566667777888
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHH
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 239 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f 239 (487)
+......+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+++||++.|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 322 FLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 7666666667788999999999999999999999999999999999999999998764
No 164
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.20 E-value=5.9e-11 Score=112.80 Aligned_cols=129 Identities=16% Similarity=0.217 Sum_probs=117.0
Q ss_pred Cccccc-cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchh-HHHHHHHHHHhhhh
Q 011369 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~-~~~l~~~r~l~G~g 183 (487)
|.+.++ +|.++.+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++.++..+.++ ++.+++..++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVG 314 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Confidence 555554 8999999999999999999999999999999999999999888888888888887774 88889999999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
.+...+....++.|.+|+++|+++.++.+....+|..+++.+++.+.+++|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999887643
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.18 E-value=1.1e-10 Score=113.46 Aligned_cols=137 Identities=11% Similarity=0.039 Sum_probs=103.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g 183 (487)
|.+.++.|.++.+.+.+.+.+.++..++.++.|++.||+|||+.+..+.++..++.+.....+ +...+.+..+..+.+
T Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 255 PTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 555566788888899999999999999999999999999999998888877766555444322 222222222222222
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHH
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGE 242 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~ 242 (487)
.....+..+.++.|.+|+++|++++|+......+|..++|.+.+.+.++.|+....++.
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~ 393 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFI 393 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHH
Confidence 22334556678899999999999999999999999999999999999988876543333
No 166
>PRK15075 citrate-proton symporter; Provisional
Probab=99.18 E-value=1.6e-10 Score=112.48 Aligned_cols=131 Identities=9% Similarity=-0.014 Sum_probs=98.3
Q ss_pred Ccc-ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHH-H---hhcchhHHHHHHHHHHh
Q 011369 106 SGI-QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-G---CGSSFDFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~---~~~a~~~~~l~~~r~l~ 180 (487)
|.+ ++.+|.+..+.++....+.++..++.+++|+++||+|||++++.+..+..+... . ....+++..+.+..++.
T Consensus 262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (434)
T PRK15075 262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWL 341 (434)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHH
Confidence 444 445799988889998899999999999999999999999988776544332221 1 11234455555556667
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHh-hhhhhhhhHHHHHHhhccccchH
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWR 236 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~~~wr 236 (487)
|++.+...+....++.|.+|+++|+..+++... +..++..++|.+.+.+.++.|++
T Consensus 342 ~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 342 SFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 777777777777889999999999999998644 44445778999999999888864
No 167
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.17 E-value=2.2e-10 Score=99.68 Aligned_cols=150 Identities=11% Similarity=0.076 Sum_probs=119.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-------hhHHHHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRM 178 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~~~l~~~r~ 178 (487)
|++++.+|+|.+|.+.+.++-.+|..+ .++.|.+.|++|+|.++.+|.+...+|..+...+ .++|.+.+..+
T Consensus 26 ~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 26 PQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 889999999999999999999999987 5889999999999999999999999888776542 47889999999
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 179 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 179 l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+.|.+.+....+......+.|| ++||++.|+.-...++++.+-..+...+.+.-.-+..+.+...+.++..+...++.
T Consensus 105 l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 105 LGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 9999988888888888889998 58999999999999998877666665555543344444444444444444444443
No 168
>PRK10054 putative transporter; Provisional
Probab=99.17 E-value=1.6e-10 Score=110.77 Aligned_cols=144 Identities=17% Similarity=0.081 Sum_probs=120.9
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-hhHHHHHHHHHHhhhhhhhhh
Q 011369 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 110 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~g~g~~~ 188 (487)
++.+.+....+++.+.+.+.....+++.|++.||+++|+.+..++.+..++.+...++ ++.+.++++.++.|+|.+...
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYA 316 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777888888888888888999999999999999999988888888777664 678778888999999999888
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHh
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
|....++.+..|++.|+++.+..+ ...+|..+||.++|.+.++.|.+..|++.++...+..++.+
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 988999999999999999988765 45589999999999999999998899887666555544444
No 169
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=2.6e-10 Score=112.39 Aligned_cols=130 Identities=10% Similarity=0.107 Sum_probs=109.8
Q ss_pred Ccccc-ccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc---hhHHHHHHHHHHhh
Q 011369 106 SGIQG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~-~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G 181 (487)
|.+.+ .+|.++.+.++......++..++.++.|++.||+|||+++..+.++.+++..+..+. ++.+.+.+.-++.|
T Consensus 285 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (471)
T PRK10504 285 PVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQG 364 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHH
Confidence 43433 578889999999999999999999999999999999999999988887776665543 34455566778889
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
++.+...+....++.+.+|+++++.+.++.+....+|..+|+.+++.+.+..++
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999988999999999999999999999999999999999999999988766554
No 170
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.16 E-value=2.5e-10 Score=106.26 Aligned_cols=149 Identities=12% Similarity=0.115 Sum_probs=132.1
Q ss_pred ccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhh
Q 011369 111 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 190 (487)
Q Consensus 111 ~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~ 190 (487)
+-+.+....|++.++..+.-++.-.+..++.+|+|.|+.++++.++..+=.+++++++|.+.+.+.+.+.|+-.+.....
T Consensus 253 ~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 253 SAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 33455667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcCCCCchhHHHHHH-HhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 191 AAPFIDDNAPVPQKTAWLSMF-YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 191 ~~~~i~~~~~~~~r~~~~~~~-~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
...|+++.+|+|-.++...+. +.+.++|..+.+.++|.+.++.|.+.+|++.+.+.++..++..+.+++
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 999999999988877777774 788999999999999999999999999999999988888888888755
No 171
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.15 E-value=2.3e-10 Score=112.33 Aligned_cols=148 Identities=10% Similarity=-0.020 Sum_probs=108.4
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCe-------EehhHHHHHHHHHHHhhcchhHHHHHHHHHHh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-------LIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (487)
+.+++|.+..+.+++.+++.++..++.+++|+++||+|||+ .+.+..++.++..++.+..++.+..++.-++.
T Consensus 279 l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~ 358 (476)
T PLN00028 279 FYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILF 358 (476)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998762 22333333344444555666766666667777
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+++.+...+...+++.+..| ++||.+.|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 359 SIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 77766666666677777655 68999999988877777777776543 22345799999999888777766665553
No 172
>TIGR00895 2A0115 benzoate transport.
Probab=99.14 E-value=8.6e-11 Score=113.12 Aligned_cols=124 Identities=15% Similarity=0.029 Sum_probs=104.8
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+....+......++....++.+.+++..++.|++.+
T Consensus 274 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 274 PKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999999999999999954443333333333333335677788889999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhh
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 229 (487)
...+....++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999999999999999999999999999999999999999875
No 173
>TIGR00898 2A0119 cation transport protein.
Probab=99.14 E-value=5.7e-10 Score=111.05 Aligned_cols=137 Identities=11% Similarity=-0.113 Sum_probs=111.0
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhH--HHHHHHHHHhhhhhhhhhhhhhhhhhhc
Q 011369 121 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDN 198 (487)
Q Consensus 121 ~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~--~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 198 (487)
+......+....+.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445566777889999999999999999999999988888887776654 5556666777788888888899999999
Q ss_pred CCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
+|++.|+.++|+.+....+|.+++|.+.+ + ...++..++++.++..++..++.++ +||+
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet 497 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPET 497 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCC
Confidence 99999999999999999999999999988 3 3456778888888877776666544 4663
No 174
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.12 E-value=7.5e-10 Score=106.61 Aligned_cols=146 Identities=13% Similarity=0.192 Sum_probs=108.0
Q ss_pred CccccccccCccccchhhhHHH-HHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hcc-hhHHHHHHHH---
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICR--- 177 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~a-~~~~~l~~~r--- 177 (487)
+.+.+++|.++.+.+++.+... ++..++.+++|++.||+|+|+.+.++.++..+..+.. ++. ++.+.+++.-
T Consensus 234 ~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (402)
T PRK11902 234 TFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIE 313 (402)
T ss_pred HHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 4466778999999999986654 5688999999999999999998877776665554333 343 4556655554
Q ss_pred -HHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 178 -MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 178 -~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
+..|++.+...+....++.+.+|.+++ ++++...++|..++++++|.+.+.+||+..|.+.++++++..++.+.
T Consensus 314 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~ 388 (402)
T PRK11902 314 NLCGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWL 388 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 345666666677777788877775544 55555667787777778999999999999999999888776555443
No 175
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=9.5e-10 Score=106.17 Aligned_cols=148 Identities=11% Similarity=-0.040 Sum_probs=118.1
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-----hhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~ 182 (487)
+.+++|.++.+.++......++..++.++.|+++||+|+|+.+.++.++..++.++.++. ++.+.+++.-++.|+
T Consensus 242 ~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 242 LISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHH
Confidence 456789999899988888888999999999999999999999988888777777666543 356777888999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+.+...+......... ++++||++.+.++....+|..+|+.+++.+.+..+|....+..++.+++..++..+.
T Consensus 322 g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 322 GIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9998777666655443 458999999999999999999999999999988887776666655555554444333
No 176
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.12 E-value=2.1e-09 Score=92.10 Aligned_cols=173 Identities=18% Similarity=0.140 Sum_probs=128.7
Q ss_pred hhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc
Q 011369 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (487)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~ 144 (487)
+++.++|.++.+..+....++. -..++.||+|+...+-+.+....-.+..+++.|.++||+
T Consensus 267 w~~~iicv~yyva~fPFi~lg~-------------------~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~ 327 (459)
T KOG4686|consen 267 WVLVIICVLYYVAWFPFITLGP-------------------MFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY 327 (459)
T ss_pred HHHHHHHHHHHHHHHHHhhhhH-------------------HHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh
Confidence 3566667777666555544443 347889999999999999998888999999999999999
Q ss_pred CCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHH
Q 011369 145 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYV 224 (487)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 224 (487)
|++...+.+..+..+..= ..+.-+++.=+++..+.|+..+.........++...|+++.|++.+..++..++|..+.|+
T Consensus 328 G~n~~wv~~a~~~tl~~H-~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 328 GFNLWWVASACILTLLGH-SGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred cceehhHHHHHHHHHHHh-hhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhh
Confidence 999887766554433221 1122234444678888999888777778888999999999999999999999999999999
Q ss_pred HHHhhccccc---hHHHHHHHHHHHHHHHHHHhhcc
Q 011369 225 YGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 225 ~~~~l~~~~~---wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
+++.+.++-| |--.|.+......+..+..++..
T Consensus 407 iag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 407 IAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 9999997644 55555554444444444555554
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.11 E-value=7e-10 Score=109.98 Aligned_cols=154 Identities=10% Similarity=-0.056 Sum_probs=105.0
Q ss_pred CccccccccCccccch------------hhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchh----
Q 011369 106 SGIQGDFKLNNFQDGV------------LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---- 169 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~------------~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~---- 169 (487)
|.+.++.|.+..+.+. ...+..++..++.+.+++++||+|||++++++.++.+++.++.++..+
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~ 391 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST 391 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 6666677776543221 123344566668889999999999999998888877776665554321
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc----------cchHHHH
Q 011369 170 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------LNWRYAF 239 (487)
Q Consensus 170 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~~wr~~f 239 (487)
...+...-+...++.....+....+.+|.+|.+.|+++.++.+....+|.++++.+.+.+.+. .++...|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 471 (502)
T TIGR00887 392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL 471 (502)
T ss_pred hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence 111111111122222224456677789999999999999999999999999999999888763 3456788
Q ss_pred HHHHHHHHHHHHHHhhccccc
Q 011369 240 WGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~p~~ 260 (487)
++.+++.++..+.. ++.||+
T Consensus 472 ~i~~~~~~~~~i~~-~~lpEt 491 (502)
T TIGR00887 472 EIFALFMFLGILFT-LLIPET 491 (502)
T ss_pred HHHHHHHHHHHHHh-eEeccC
Confidence 88888777665544 555774
No 178
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=5.7e-10 Score=102.70 Aligned_cols=132 Identities=11% Similarity=0.047 Sum_probs=109.5
Q ss_pred ccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhh
Q 011369 111 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 190 (487)
Q Consensus 111 ~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~ 190 (487)
.+|.++.+.++..+.+..+..++.+..+++.||+|+|+++.++..+..++.++....++...+ .+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999888888888777666665544333 3555889999999999
Q ss_pred hhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHH
Q 011369 191 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 245 (487)
Q Consensus 191 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~ 245 (487)
..+...+..|+ +.+++.++. ....+|..++|++.|.+.+..|.+..|++..+.
T Consensus 251 ~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 251 IFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 99999998885 456667775 556689999999999999999999998865443
No 179
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.11 E-value=2.5e-10 Score=111.00 Aligned_cols=152 Identities=17% Similarity=0.187 Sum_probs=138.8
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC--CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g 183 (487)
|...++.+.++.+.+.+.++..+...++.+..|+++|+.. ++.+..+++++.+++.+.+.++++++.++...++.|++
T Consensus 322 ~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~ 401 (509)
T KOG2504|consen 322 PSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFC 401 (509)
T ss_pred HHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999988 45567788888888899999999999999999999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhhcc
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..+ |...|+..++..++..+..++..
T Consensus 402 ~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 402 VGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 999999888999999999999999999999999999999999999988777 99999999998777766555443
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.11 E-value=5.9e-10 Score=122.26 Aligned_cols=147 Identities=18% Similarity=0.115 Sum_probs=126.1
Q ss_pred ccccccccCcc-ccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 107 GIQGDFKLNNF-QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 107 ~i~~~~~~s~~-~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
.+.+++|.+.. +.+++.+...++..++.+++|+++||+++|+++.++.++.+++.++..+..+.+.++++.++.|++.+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAG 337 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 45667899988 99999999999999999999999999999999999999888888888888899999999999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHH
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
...+...+++.+.+|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888888776653 2456667777666554444333
No 181
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.10 E-value=1e-09 Score=107.06 Aligned_cols=121 Identities=17% Similarity=0.125 Sum_probs=104.9
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-hhHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 115 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
++.+.+++.++..++..++.+++++++||+|+|+++.++.++..++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888899999999999999999999999999998888887776665 46777788889999999999999999
Q ss_pred hhhhcCC-------CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 194 FIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 194 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
+++|..+ ++++|.+.|+.+....+|..+++.+.+.+.+..||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998865 45689999999999999999999999998876665
No 182
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.10 E-value=1.1e-09 Score=104.89 Aligned_cols=144 Identities=13% Similarity=-0.049 Sum_probs=117.6
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHH-HHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV-WTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~-~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.+++|.+..+.+++.+.+.++..++.++.+++.||. +|+.++.+..+ .....++....++.+.+.+..++.|++.
T Consensus 241 p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~ 319 (394)
T PRK10213 241 PVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTF 319 (394)
T ss_pred HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 556678899999999999999999999999999999995 45544444444 3333444456677888888999999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~ 251 (487)
+...+...+++.+..| ++++++.++.....++|..+|+.++|.+.+..|++..++..+++.++..+
T Consensus 320 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 320 ALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHH
Confidence 9999989989999887 56778888888899999999999999999999999999988776554443
No 183
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.10 E-value=1.5e-10 Score=105.25 Aligned_cols=177 Identities=15% Similarity=0.053 Sum_probs=133.6
Q ss_pred hhhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc
Q 011369 65 RLLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH 144 (487)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~ 144 (487)
+.+..++++.+..+.-|..+..=.- -.+.|..|.|..+.++..+.|-.+...|.+++|+++||+
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p----------------~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDkl 315 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGP----------------LYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKL 315 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHH----------------HHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 3455556666666655544332100 236677899999999999999999999999999999996
Q ss_pred --CCCeEehh-HHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh-h
Q 011369 145 --NPFRLIGV-GLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-G 218 (487)
Q Consensus 145 --Grr~~l~~-~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G 218 (487)
|||....+ .++...++.+..-+++ |++...++-++.|+..-+-.-.......|..|++--|.+.|+...+..+ |
T Consensus 316 fkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~G 395 (448)
T COG2271 316 FKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIG 395 (448)
T ss_pred cccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhh
Confidence 67765433 3333444444444444 5688888889999888777777777889999999999999999999888 8
Q ss_pred hhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 219 VALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 219 ~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
...+....+.+.+.+||...|.+..+.+++..++.....
T Consensus 396 a~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~ 434 (448)
T COG2271 396 AALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVW 434 (448)
T ss_pred HHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999998887777666555443
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.10 E-value=5.4e-10 Score=107.31 Aligned_cols=147 Identities=12% Similarity=0.022 Sum_probs=117.1
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|...+|.+.++.+.+++.+...++...+..+.+++.|| ++.|+.+..+.++.+++.++.+++++++.+.+..++.|++.
T Consensus 232 p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~ 311 (400)
T PRK11646 232 PIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGS 311 (400)
T ss_pred hhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 55556655577888998888887777666666777664 66677778888888888888888889888888889999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc---c-hHHHHHHHHHHHHHHHHH
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---N-WRYAFWGEAILMLPFAVL 252 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---~-wr~~f~~~~~~~~~~~~~ 252 (487)
+...|...+++.|..|+++||+++|+.+....+|..+||.++|.+.++. + -...+++.++..++..+.
T Consensus 312 ~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 312 IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 9888999999999999999999999999999999999999999998763 3 245666555555554433
No 185
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.1e-09 Score=99.83 Aligned_cols=143 Identities=14% Similarity=0.086 Sum_probs=126.4
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~ 187 (487)
-++++|++..++..+.-...+..+++++++|+|.||+|.|+++.+++++..+.++..-+...-..+.++-.+.|+..|..
T Consensus 279 g~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~ 358 (438)
T COG2270 279 GAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGA 358 (438)
T ss_pred HHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchH
Confidence 34589999999999999999999999999999999999999999999999999998888887777888889999999999
Q ss_pred hhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHH
Q 011369 188 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFA 250 (487)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~ 250 (487)
+..+.++..+.+|+++-++.+|+++...-.+..+||.+-+.+.+.. +-|.-+....++..+.+
T Consensus 359 qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl 422 (438)
T COG2270 359 QASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGL 422 (438)
T ss_pred HHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhH
Confidence 9999999999999999999999999999999999999998887654 35666666655543333
No 186
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=1.1e-09 Score=106.48 Aligned_cols=147 Identities=7% Similarity=-0.005 Sum_probs=96.8
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh----cchhHHHHHHHHHHhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG----SSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~----~a~~~~~l~~~r~l~G~g 183 (487)
+.+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+... ..++....+..-.+.+++
T Consensus 270 l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (432)
T PRK10406 270 LVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLI 349 (432)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 4566888888889989888888899999999999999999987776654433332111 122333222222323333
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh-hhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhh
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~ 255 (487)
.+...+....++.|++|++.|+.++|+.+....+ .....|.+.+.+. ..| |...++..++..++..+..++
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4444455678899999999999999998765543 2334777777554 344 656666665655555555444
No 187
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.07 E-value=1.2e-09 Score=103.67 Aligned_cols=152 Identities=16% Similarity=0.144 Sum_probs=123.5
Q ss_pred cccccc-cCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-hhHHHHH----HHHHHhh
Q 011369 108 IQGDFK-LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIA----ICRMLVG 181 (487)
Q Consensus 108 i~~~~~-~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~----~~r~l~G 181 (487)
.-+|.| .+....+.+.++..+.-...-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+... +...++|
T Consensus 233 yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG 312 (400)
T PF03825_consen 233 YLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHG 312 (400)
T ss_pred HHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhh
Confidence 455666 666777877788888888999999999999999999999999999998888887 5544433 3355799
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhh-hhhhhhhHHHHHHhhccccc------hHHHHHHHHHHHHHHHHHHh
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~l~~~~~------wr~~f~~~~~~~~~~~~~~~ 254 (487)
+..+..+.++..++.+.+|++.|+++.+++... .++|..+|..++|.+.+++| |...+.+.+++.++..++.+
T Consensus 313 ~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~ 392 (400)
T PF03825_consen 313 LTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFV 392 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998764 68999999999999998765 55566666666666665555
Q ss_pred hcccc
Q 011369 255 VIKPL 259 (487)
Q Consensus 255 ~~~p~ 259 (487)
++.+|
T Consensus 393 ~~fk~ 397 (400)
T PF03825_consen 393 ILFKP 397 (400)
T ss_pred hhccC
Confidence 55443
No 188
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.06 E-value=1.6e-09 Score=103.65 Aligned_cols=151 Identities=12% Similarity=0.028 Sum_probs=114.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh-cchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-SSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++.. ..++.+..++..++.+++.
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~ 303 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGL 303 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 446666899999999999999999999999999999999999999988888887776554 3455666666777777766
Q ss_pred hhhhhhhh-hhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 185 ASFISLAA-PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 185 g~~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
....+... ....+..+++.++.. ..+....+|..+||.++|.+.+. .+|++.+.+.++...+.......+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 54444434 344454455555544 34667889999999999999885 68999999998777666555555544
No 189
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=6.6e-10 Score=105.21 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=104.1
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+ +||+.+.++..+.+++.++..+.++..... .-++.|++.
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~ 299 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ 299 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence 556667899999999999999999999999999999999 566677777788877777777665433332 457789999
Q ss_pred hhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 185 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
+...+.....+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9988888777765554 5667899999998888999999999999998765
No 190
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.05 E-value=1.4e-09 Score=118.97 Aligned_cols=146 Identities=12% Similarity=0.076 Sum_probs=122.1
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc--------------------
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------------------- 167 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------------------- 167 (487)
+.+.+|.++.+.|++.+++.++..++.++.|+++|+.++++.+..+.++.+++.+..++.
T Consensus 252 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 331 (1140)
T PRK06814 252 AKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSK 331 (1140)
T ss_pred HHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcc
Confidence 455689999999999999999999999999999999888888777777766666544443
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc-cccchHHHHHHHHHHH
Q 011369 168 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILM 246 (487)
Q Consensus 168 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~~wr~~f~~~~~~~ 246 (487)
++.+.++++.++.|++.+...+...+++.+.+|+++||+++|+.+....+|..+++++++.+. ...++...|++.+++.
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~ 411 (1140)
T PRK06814 332 RHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALAN 411 (1140)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 678888899999999999999999999999999999999999999999999999999998887 3456777777666654
Q ss_pred HHHHHHH
Q 011369 247 LPFAVLA 253 (487)
Q Consensus 247 ~~~~~~~ 253 (487)
++..+..
T Consensus 412 ~~~~~~~ 418 (1140)
T PRK06814 412 LIVAILI 418 (1140)
T ss_pred HHHHHHH
Confidence 4444333
No 191
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.04 E-value=1.8e-09 Score=100.94 Aligned_cols=148 Identities=18% Similarity=0.108 Sum_probs=134.6
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
.+|.+..+...|........|-.+.-++.+++..|+|+-+++.+++.+..+=.+.....+|.|+.+-..+++|+..+.++
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 46677777788888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhh-hhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
.+..+|+++..||+-|..+.++++.. .++|--+|.++||.+.+.++=|..|++.++.+++.+++...+
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998654 679999999999999999999999999999888777665554
No 192
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.04 E-value=2.9e-09 Score=90.38 Aligned_cols=308 Identities=13% Similarity=0.097 Sum_probs=176.8
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
..+-+.++....++|.+.-...-...+...+.|.++|+-|||+.-+.-++.+.++++ .-.++++-.++++|.+-|+..+
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHH
Confidence 345667888888998888877778888899999999999999987666666655443 4567899999999999999999
Q ss_pred hhhhhhhhh-hhhcCCCCc-hhHHHHHH-----HhhhhhhhhhHHHHHHhhccccc--hHHHHHHHHHHHHHHHHHHhhc
Q 011369 186 SFISLAAPF-IDDNAPVPQ-KTAWLSMF-----YMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 186 ~~~~~~~~~-i~~~~~~~~-r~~~~~~~-----~~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
....+--++ +.|...++. -..+.+.. ..+..+-.+++.+.+..+.++++ --.+|-..+.+..+.. ...
T Consensus 140 LLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm---Avi 216 (454)
T KOG4332|consen 140 LLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM---AVI 216 (454)
T ss_pred HHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH---HHH
Confidence 888877665 577653321 11122211 13334445556666666666543 3345544433222222 122
Q ss_pred cccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHH
Q 011369 257 KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV 336 (487)
Q Consensus 257 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (487)
+..|-.+.+++.+.+... .+.....+.+..++++.+..
T Consensus 217 l~~W~ENygdps~~kdll------------------------------------------tqf~gaa~aiaSD~ki~LLG 254 (454)
T KOG4332|consen 217 LSSWSENYGDPSENKDLL------------------------------------------TQFKGAARAIASDEKIALLG 254 (454)
T ss_pred HhhhhhccCChhhhHHHH------------------------------------------HHhhHhHHHHhcchHHHHHH
Confidence 233333333333322221 11122334455555555444
Q ss_pred HHH-HHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHH
Q 011369 337 LGY-IAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 415 (487)
Q Consensus 337 ~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (487)
... .+-...+..+..|.|..--+..+.+. .. +.+-+.++..+|+-+..++..|-..+.. ..+.+...+..+.+.
T Consensus 255 ~iqsLFE~smytFVFLWTPaLspn~e~iPh-Gf-iFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~vs~a~l~ 329 (454)
T KOG4332|consen 255 AIQSLFEGSMYTFVFLWTPALSPNDEEIPH-GF-IFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLVSIAALL 329 (454)
T ss_pred HHHHHHhhhhheeeeeecccCCCCcccCCc-hh-HHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHHHHHHHH
Confidence 433 33344455566677765544333321 11 1122234444454444444443333222 344444444444444
Q ss_pred HHHHHH-------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHH
Q 011369 416 TAFCLS-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 464 (487)
Q Consensus 416 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~ 464 (487)
+..... +....++.++++-.+.+..||.+.-+-.+..|.+.|++.+...
T Consensus 330 Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 330 LPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred HHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhhe
Confidence 333321 2334466777788889999999998888999989998877654
No 193
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1.3e-09 Score=103.57 Aligned_cols=155 Identities=11% Similarity=-0.056 Sum_probs=123.1
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch---hHH------HHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAIC 176 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~------~l~~~ 176 (487)
..+-++-|++..+..+.+....+...+..+++..+.||+|||+.+++++.+..+..++..... +.. ..+++
T Consensus 294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 456677799999999999999999999999999999999999999999999988887766542 111 12333
Q ss_pred HHHhhhhhh-hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 177 RMLVGVGEA-SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 177 r~l~G~g~g-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
.++..++.+ +..|...-+.+|.+|++.|..++++.....-+...+-...-..+.+..|= +.|.+..+++++..+..++
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~ 452 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR 452 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence 333333333 24678889999999999999999999988888887766666666666554 8889999999999999999
Q ss_pred cccccc
Q 011369 256 IKPLQL 261 (487)
Q Consensus 256 ~~p~~~ 261 (487)
.+||+.
T Consensus 453 ~lPETk 458 (485)
T KOG0569|consen 453 YLPETK 458 (485)
T ss_pred hCcccC
Confidence 999953
No 194
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.01 E-value=4.4e-09 Score=97.41 Aligned_cols=322 Identities=15% Similarity=0.048 Sum_probs=177.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcC
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 199 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 199 (487)
+.+.-+-.+...+.-+.+.++.+|+..+.=..++.++..++.++.++++|.+.=+++-++.+++.|........+.. .+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc
Confidence 44455555666677777888889887665566777788899999999999999999999999999988887777654 55
Q ss_pred CCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc--hHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcc
Q 011369 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 277 (487)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 277 (487)
++ ..++-+.++.+.++++|+..-..+.. .+ -|..+++...+.++..+..++.+|++.......+.... .+.
T Consensus 141 ~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~--~~~ 213 (402)
T PF02487_consen 141 GK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESE--DEA 213 (402)
T ss_pred Cc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCC--Ccc
Confidence 53 35788888888888888877655555 44 47888888877766666666666543221111110000 000
Q ss_pred cccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeeccccee
Q 011369 278 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 357 (487)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 357 (487)
. ++...+ +..+.+.+. ......++.++..|.++. ...-..+.++.......++.. ...
T Consensus 214 ~---------~~~~~~----~~~~~~~~~----~~~~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~~---tl~ 271 (402)
T PF02487_consen 214 E---------DDLLES----ETSESKPDS----SSKLSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVAP---TLL 271 (402)
T ss_pred c---------cccccc----ccccccccc----cchhhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchHH---Hhc
Confidence 0 000000 000000000 000111112222232222 222233344444433333322 221
Q ss_pred eeccccc-ccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 011369 358 YNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT---AFCLSSLYGFLALFTV 432 (487)
Q Consensus 358 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 432 (487)
......+ .... .......++.++++-...++ |+ |+. +++...-.+-.+..++ ..+.++.|..+++.+.
T Consensus 272 fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~l---wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~ 344 (402)
T PF02487_consen 272 FPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRL---WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFY 344 (402)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhH---HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1111111 2222 33444555555555433221 22 211 2222222222222221 2234566777777788
Q ss_pred HHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccce
Q 011369 433 GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (487)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~ 479 (487)
-|+..|..+......+.++.++++|..++|.. .....+|..++..+
T Consensus 345 eGLlGGa~YVNtF~~I~~~~~~~~REFslg~v-svsds~GI~lAgll 390 (402)
T PF02487_consen 345 EGLLGGASYVNTFYRISEEVPPEDREFSLGAV-SVSDSLGILLAGLL 390 (402)
T ss_pred HHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHH-HHHhhHHHHHHHHH
Confidence 88888888888888889999999999999996 66666665544433
No 195
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.01 E-value=1.4e-09 Score=99.23 Aligned_cols=150 Identities=15% Similarity=-0.035 Sum_probs=121.3
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-------hhHHHHHHHHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRML 179 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------~~~~~l~~~r~l 179 (487)
.++++|+.++.+.|.+.+.+.+...+..+.+|+|+||+|.+|++.+......++..+.++. .+....++.-+.
T Consensus 244 ~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 244 YLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred HHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 3778899999999999999999999999999999999999999999988888888877765 344444444444
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHhhcc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
.++..|.-......++..++|+ +-|.+.|+.....++|...-|..-+...+..| ++..|++...+.+++.+..+...
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444567788888875 88999999999999999888888777776666 99999999998888887776654
No 196
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.01 E-value=2.1e-09 Score=105.73 Aligned_cols=149 Identities=15% Similarity=0.041 Sum_probs=104.4
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEeh--------hHHHHH--HHHHHHhhc-chhHHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG--------VGLSVW--TFATAGCGS-SFDFWSIAIC 176 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~--------~~~~~~--~~~~~~~~~-a~~~~~l~~~ 176 (487)
+.+.+|.+..+.++..++..++..++.++.|+++||+++|+... .+.... ++..+.... ..+....++.
T Consensus 288 l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (465)
T TIGR00894 288 ISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIII 367 (465)
T ss_pred HHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHH
Confidence 45678999999999999999999999999999999987654321 111111 111111111 2344444555
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc---cchHHHHHHHHHHHHHHHHHH
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---LNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---~~wr~~f~~~~~~~~~~~~~~ 253 (487)
-.+.+.+.+...+.......|..|+ .+|.+.++.+....+|..++|.+.+.+.+. .+|+..|.+.++..++..++.
T Consensus 368 ~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~ 446 (465)
T TIGR00894 368 LTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFY 446 (465)
T ss_pred HHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHe
Confidence 5555555555555555556677765 899999999999999999999999988764 349999999988777766655
Q ss_pred hhcc
Q 011369 254 FVIK 257 (487)
Q Consensus 254 ~~~~ 257 (487)
.+..
T Consensus 447 ~~~~ 450 (465)
T TIGR00894 447 LIFG 450 (465)
T ss_pred eeee
Confidence 5443
No 197
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.99 E-value=1.8e-09 Score=104.17 Aligned_cols=140 Identities=11% Similarity=0.064 Sum_probs=98.7
Q ss_pred Ccccccc--ccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeE-ehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 106 SGIQGDF--KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL-IGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 106 ~~i~~~~--~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
|.+.+++ +.+..+.++..+...++..++.+.+|+++||++||+. .....++.+++..+....++....+++-.+.++
T Consensus 266 p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (412)
T TIGR02332 266 PQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASM 345 (412)
T ss_pred HHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 5555554 5677888999999999999999999999999998774 333444444433322222222222222223333
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHH
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAIL 245 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~ 245 (487)
|.....+.......|.+|+++|++++|+.+....+|..++|.+.+.+.+..| |++.|++.++.
T Consensus 346 g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 346 GSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred HhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 3333334444555788999999999999999999999999999999998874 99999877654
No 198
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.96 E-value=5.8e-09 Score=103.18 Aligned_cols=124 Identities=20% Similarity=0.166 Sum_probs=108.2
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc---chhHHHHHHHHHHhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVG 183 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---a~~~~~l~~~r~l~G~g 183 (487)
.+++.+|.++.+.|+....+.++..++.++.|++.||+|+|+.+..+.++..++.++... .++.+...+..++.|+|
T Consensus 285 ~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 285 ELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 355667999999999999999999999999999999999999998888888777665543 34666777888999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 230 (487)
.|...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~ 411 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLL 411 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998887764
No 199
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.94 E-value=1.1e-08 Score=98.10 Aligned_cols=144 Identities=11% Similarity=0.053 Sum_probs=114.4
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~ 187 (487)
+++.+|.++.+.|++.+.+.++..++++..+++.||+++|+++..+. +.++..++.++.++++...+..++.|++.+..
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhh
Confidence 55678999999999999999999999999999999999999888775 44455555566778887888888999999988
Q ss_pred hhhhhhhhhhcCCCCc-hhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 188 ISLAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 188 ~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
.+...+.+.+..|++. +|++.++.+....+|..++..+.+.+ ...|-|..+.+.+...+..+.+.
T Consensus 311 ~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 311 VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 8888888888766654 79999999999999999999998866 45565555555444433433333
No 200
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.93 E-value=3.4e-09 Score=104.99 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=110.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc----chhHHHHHHHHHHhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----SFDFWSIAICRMLVGVG 183 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----a~~~~~l~~~r~l~G~g 183 (487)
+++.+|.++.+.++......++..++.++.|++.||+|||+.+.++..+.+++..+..+ ..+++.+....++.|+|
T Consensus 282 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 361 (485)
T TIGR00711 282 LQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFG 361 (485)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Confidence 44567999999999999999999999999999999999999999998888888877662 23567777888999999
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
.+...+.......+..|+++|+.+.++.+....+|..+|+.+.+.+.++..
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~~ 412 (485)
T TIGR00711 362 MGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNRT 412 (485)
T ss_pred HHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888888888888999999999999999999999999999988876433
No 201
>PRK10133 L-fucose transporter; Provisional
Probab=98.91 E-value=7.4e-09 Score=100.45 Aligned_cols=140 Identities=10% Similarity=-0.121 Sum_probs=114.1
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
++.+|.++.+.++..+.+.++..++.++.|++.||+|+|+++..+.++..++.++..+.++.. -+..-++.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999888888777776666666543 3456678999999999
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHH
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAV 251 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~ 251 (487)
|...+...|..++ +.+.+.++... ..+|..++|++.|.+.+..| -|..|++..+..+....
T Consensus 366 P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 366 PTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 9999999999875 56777777764 44678888899999998887 78888877555444333
No 202
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.91 E-value=1.9e-08 Score=96.37 Aligned_cols=133 Identities=14% Similarity=0.196 Sum_probs=103.3
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-----hhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~~~~~l~~~r~l~G~ 182 (487)
+.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..++.++..+. ++...+++..++.|+
T Consensus 233 ~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 233 YIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 455789999999999999999999999999999999999999888888777776665543 234556667788999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhh-hhhhHHHHHHhhccccchHHHHHHH
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLNWRYAFWGE 242 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~~~~~l~~~~~wr~~f~~~ 242 (487)
+.+...+.......|..| ++|+++.++.+..... |.+.++.++ .+.+..+|...+...
T Consensus 313 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~-~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 313 GNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVS-LIHGNTAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHH-hccccChHHHHHHHH
Confidence 999999999999999887 6899999998776654 555555554 555544555444443
No 203
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.90 E-value=6.6e-09 Score=96.30 Aligned_cols=144 Identities=22% Similarity=0.352 Sum_probs=120.0
Q ss_pred CccccccccCc--cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchh--HHHHHHHHHHhh
Q 011369 106 SGIQGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~--~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~--~~~l~~~r~l~G 181 (487)
+.+..+++.+. .+.++..+.+.++..++.++.|.++||+|||+.+..+.....++.+++++..+ .+.+++.|+++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 105 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 55666666555 47899999999999999999999999999998888888766666777777766 999999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCC-CchhHHHHHHHh-hhhhhhhhHHHHHHhhccc--cchHHHHHHHHHHHHHH
Q 011369 182 VGEASFISLAAPFIDDNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPF 249 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~~wr~~f~~~~~~~~~~ 249 (487)
++.+...+....++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+||+.|.+........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999999999997 689999999988 5888888998877766653 67999777776655443
No 204
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.89 E-value=4.1e-09 Score=99.83 Aligned_cols=111 Identities=9% Similarity=-0.035 Sum_probs=94.3
Q ss_pred CccccccccCccccchhhhHHH-HHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc-----------hhHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----------FDFWSI 173 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~-~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----------~~~~~l 173 (487)
|...+++|.++.+.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++.+.+
T Consensus 233 ~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (356)
T TIGR00901 233 TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLML 312 (356)
T ss_pred HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence 4455568999999998887766 6788999999999999999999988888887776655442 456778
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhh
Q 011369 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 216 (487)
Q Consensus 174 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 216 (487)
..+.++.+++.+...+...+++.|.+|+++||+.++++++..+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 313 FLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8889999999999999999999999999999999999887654
No 205
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.89 E-value=6.1e-09 Score=100.07 Aligned_cols=134 Identities=9% Similarity=-0.070 Sum_probs=96.7
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~ 187 (487)
+.+++|.++.+.+.+.+...++..++.++.+++.||+|||+.+.++..+..++.++..+.++.+..+..-.+.+.|.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 309 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVG 309 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999889999999999999999999999999999999999999988888888887766655555555555544443
Q ss_pred hhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHH
Q 011369 188 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 246 (487)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~ 246 (487)
.+. ....+..|.++|+ +.......++..+++.+++.+.++.|+.....+.+.+.
T Consensus 310 ~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 310 FGV--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred hHH--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 333 2334455554553 44445556777788888888887777766555555443
No 206
>PRK09848 glucuronide transporter; Provisional
Probab=98.89 E-value=8.7e-09 Score=100.77 Aligned_cols=128 Identities=9% Similarity=0.046 Sum_probs=102.8
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA 185 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g 185 (487)
+++.+|.++...++......++..++.++++++.||+|+|+++.++.++..++.++..+.+ +++.+++..++.|+|.+
T Consensus 255 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~ 334 (448)
T PRK09848 255 VRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG 334 (448)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHH
Confidence 3445676655444444445677888999999999999999999999998888877776654 67777888899999999
Q ss_pred hhhhhhhhhhhhcCCCC-------chhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 186 SFISLAAPFIDDNAPVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
...+...++.+|..+.+ ++|...++.+....+|..+|+.+.+.+.+..|+
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999988754 459999999999999999999998877654443
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.85 E-value=4.6e-08 Score=95.06 Aligned_cols=122 Identities=17% Similarity=0.208 Sum_probs=108.3
Q ss_pred cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhhhhhh
Q 011369 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFIS 189 (487)
Q Consensus 112 ~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g~~~~ 189 (487)
++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+...+
T Consensus 256 l~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~ 334 (428)
T PF13347_consen 256 LGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV 334 (428)
T ss_pred hcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc
Confidence 4433 6778888899999999999999999999999999999999999999988886 999999999999999999999
Q ss_pred hhhhhhhhcCCC-------CchhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 190 LAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 190 ~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
...++++|..+. ++.|...|......-+|..+++.+.+.+.+..|
T Consensus 335 ~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 335 IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 999999999873 446899999999999999999998887765433
No 208
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=1.8e-07 Score=88.46 Aligned_cols=322 Identities=13% Similarity=0.074 Sum_probs=174.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc------c--h-------hHHHHHHHHHHhhhhhhhh
Q 011369 123 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------S--F-------DFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 123 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------a--~-------~~~~l~~~r~l~G~g~g~~ 187 (487)
.-.-.+...+.++..|.+.||..|.++.-.+++..-+...+++. . + -...+++.-.+.|.-.-..
T Consensus 44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La 123 (432)
T PF06963_consen 44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA 123 (432)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH
Confidence 33445567788899999999999999888777664333222221 1 1 1222222222333222211
Q ss_pred h-hhhhhhhhhcC------CCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 188 I-SLAAPFIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 188 ~-~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
. ....++=.||. +++.+.+.++.+.-.=.+..+++|++.|.+.+..+.+...++.++..++..++=+++...-
T Consensus 124 s~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~V 203 (432)
T PF06963_consen 124 SIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARV 203 (432)
T ss_pred HhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11222224443 3445667777777777788999999999999988999888888888877776655554221
Q ss_pred cCC---CCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHH
Q 011369 261 LKG---FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 337 (487)
Q Consensus 261 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (487)
.+. ...+++.+....... .+ +..+........+...+..++...+++.-++.+.+.....
T Consensus 204 Y~~~P~L~~~~~~~~~~~~~~----------~~-------~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~a 266 (432)
T PF06963_consen 204 YNSVPALAVKKRSSESESSSD----------EE-------SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFA 266 (432)
T ss_pred HHhChHhcCCCCCcccccccc----------cc-------ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHH
Confidence 111 111111100000000 00 0000000000111111233344456666777777766555
Q ss_pred HHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHH--
Q 011369 338 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-- 414 (487)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-- 414 (487)
..+++.. ..++......|+.+. |+++... .+-....+.++.|+++..++.+|+|..+ .-.++......++
T Consensus 267 lalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr-----~G~~~l~~q~~~L~~ 339 (432)
T PF06963_consen 267 LALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVR-----AGLWSLWWQWVCLAL 339 (432)
T ss_pred HHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----hHHHHHHHHHHHHHH
Confidence 5555554 334566667788775 7776554 4445666788899999999999999873 3333333222222
Q ss_pred -HHH-HHHH------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHH
Q 011369 415 -LTA-FCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 468 (487)
Q Consensus 415 -~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~ 468 (487)
... +... +...++....+.-++.-..=-....++.+.+|+++||...|..+...
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~ 401 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQ 401 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHH
Confidence 212 2212 12223333333333333333345777888999999999999974433
No 209
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.84 E-value=2.6e-09 Score=99.85 Aligned_cols=164 Identities=10% Similarity=-0.007 Sum_probs=128.2
Q ss_pred hhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccch
Q 011369 318 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 397 (487)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 397 (487)
..+.+...++.++....+.+...+.+.+...+.+++=-++++..+.+...-...+....+-++.-+..+++.+|+|+-
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-- 436 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-- 436 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--
Confidence 344555466777777776666666666666666666566777554443222333455577788889999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCcc
Q 011369 398 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 477 (487)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p 477 (487)
+++..+.....+=.+......+.|..+..-++-++..+..|..+.+++....||+.+.++.++.......+|-.+|.
T Consensus 437 ---~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 437 ---NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred ---ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 67777777777777777788899999999999999999999999999999999999999999998888888999999
Q ss_pred ceeeeeecc
Q 011369 478 PLVGVLQVC 486 (487)
Q Consensus 478 ~~~g~l~~~ 486 (487)
+++|.+.+.
T Consensus 514 lIGG~~v~~ 522 (618)
T KOG3762|consen 514 LIGGFVVER 522 (618)
T ss_pred hhhhhhhee
Confidence 999987654
No 210
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.82 E-value=5.3e-08 Score=95.44 Aligned_cols=140 Identities=16% Similarity=0.194 Sum_probs=116.4
Q ss_pred cchhhhHHHHHHHHHHHHHHH----hhhh-cCCCeEe--hhHHHHHHHHHHHhhc---------chhHHHHHHHHHHhhh
Q 011369 119 DGVLSSAFMVGLLVASPIFAS----LAKS-HNPFRLI--GVGLSVWTFATAGCGS---------SFDFWSIAICRMLVGV 182 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~----l~dr-~Grr~~l--~~~~~~~~~~~~~~~~---------a~~~~~l~~~r~l~G~ 182 (487)
.+++.++..+...+.+++..+ +.+| .+++... .+|.++.+++.+..++ ..|++++++..++.|+
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 578888888888888888654 4444 2333433 6788888888777664 4699999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccc
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKP 258 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p 258 (487)
|.....|...+++.+..|++.||+++|++.....+|..+++.++.......+|...|...++..++..++.++..|
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988777778999999988888777777666544
No 211
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.82 E-value=2e-08 Score=98.13 Aligned_cols=125 Identities=10% Similarity=-0.017 Sum_probs=111.5
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc----------chhHHHHHHHHHH
Q 011369 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRML 179 (487)
Q Consensus 110 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------a~~~~~l~~~r~l 179 (487)
+++|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+.... .++.+.++..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 578999999999999999999999999999999999999999999999988765432 1444456677889
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
.+++.+........++.+..|++++|...+++++..++|..+++.+++.+.++.|
T Consensus 361 ~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 361 AEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999987665
No 212
>PRK11043 putative transporter; Provisional
Probab=98.81 E-value=6.9e-08 Score=93.07 Aligned_cols=131 Identities=8% Similarity=-0.064 Sum_probs=101.5
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hc--chhHHHHHHHHHHh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS--SFDFWSIAICRMLV 180 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~--a~~~~~l~~~r~l~ 180 (487)
|.+.+++|.++.+.++....+.++..++.+..+++.||+|+|+.+....+..+++.+.. .. .++.+.+++.-.+.
T Consensus 227 p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (401)
T PRK11043 227 PFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVM 306 (401)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHH
Confidence 55667789999999998888889999999999999999999987665555544443322 11 34566666777888
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHH
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 237 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~ 237 (487)
|++.+...+.......|..| ++|+++.++++.....+..+++.+.+.+.+...-..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 307 AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 99999999988888878776 589999999999888888888888888876443333
No 213
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.79 E-value=4.4e-08 Score=92.63 Aligned_cols=143 Identities=8% Similarity=-0.094 Sum_probs=99.3
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCC---eEeh-hHHHHHHHHHHHhhcchhHHHHHHHHHHhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF---RLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr---~~l~-~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 181 (487)
|.+-++.|.+.. .+...++..+...+ ..++++||..|| +... ...++.++.....+++.+....++.-++.|
T Consensus 216 p~~L~~~g~s~~-~~~~~~l~~~~g~~---g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~ 291 (368)
T TIGR00903 216 EAALRPAGLEDI-AGDAVALAILAGLI---GVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAG 291 (368)
T ss_pred HHHHHHCCCChH-HHHHHHHHHHHHHH---HHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHH
Confidence 555566676653 45555554444444 457788887654 3322 234444444444455555555555666677
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHh
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
++.....+....+.+|.+|++.|+++.|+.+....+|..++|++.+.+.. +-+..|.+.+++.++..+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 292 LLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred HhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 77777778788999999999999999999999999999999988877763 677888888887777666654
No 214
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.78 E-value=2.5e-07 Score=88.59 Aligned_cols=253 Identities=13% Similarity=0.051 Sum_probs=151.6
Q ss_pred CccccccccC-----ccccchhhhHHHHHHHHH-HHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc----h-------
Q 011369 106 SGIQGDFKLN-----NFQDGVLSSAFMVGLLVA-SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F------- 168 (487)
Q Consensus 106 ~~i~~~~~~s-----~~~~~~~~s~~~~~~~i~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a----~------- 168 (487)
.++++.+.++ .+.+.++-+...+..++. .++.+++++|++|++++-+....+.....++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 5677777663 357888888888877776 8999999999999999888877777766666554 1
Q ss_pred --------------------hHHHHHHHHHHhhhhhhhhhh-hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHH
Q 011369 169 --------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 227 (487)
Q Consensus 169 --------------------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 227 (487)
+.|...+.-+...+-...... .-..++.|.+..+|-.|..+++..+.++|.++++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444445555555554 77889999999999999999999999999999998888
Q ss_pred hhcc--------ccchH----HHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccchhhcccccCcccCCCcccccccc
Q 011369 228 VVGS--------HLNWR----YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 295 (487)
Q Consensus 228 ~l~~--------~~~wr----~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (487)
++.+ ...|. ..+.+.++..++...+ ...+.+.... +++..+.. ++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~-~~------------------- 243 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILL-YWWVNRNVLT--DPRSYNPA-LK------------------- 243 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcccC--Cccccchh-hc-------------------
Confidence 7762 12342 2333333333333333 3332221110 01000000 00
Q ss_pred hhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-e---ee
Q 011369 296 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M---FG 371 (487)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~---~~ 371 (487)
++ ..+...+..+.++.++++|.++.+++...+++.....+..-.-....+.+..+.... . +.
T Consensus 244 -------~~-------k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~ 309 (472)
T TIGR00769 244 -------EK-------KVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFS 309 (472)
T ss_pred -------cc-------cCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 00 001123445778889999999888888777766554443322233333332111111 1 12
Q ss_pred ceeecccchhhhhhhhhHhhhccc
Q 011369 372 GVTIVCGIVGTISGGFILDQMGAT 395 (487)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~ 395 (487)
...++..++..++.+++.+|+|-+
T Consensus 310 ~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 310 TWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 233344445566668888888876
No 215
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.77 E-value=1.7e-09 Score=75.76 Aligned_cols=77 Identities=27% Similarity=0.317 Sum_probs=71.8
Q ss_pred CCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHH
Q 011369 98 DKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 174 (487)
Q Consensus 98 ~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 174 (487)
+|.|+|.+|.+++|.++|.++.||+.+..++||.+|.+...++.++..+++.+..+++...+..+.+++.++++.+.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 57788999999999999999999999999999999999999999998889999999999999999999999877653
No 216
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.77 E-value=1.1e-08 Score=91.10 Aligned_cols=129 Identities=6% Similarity=-0.016 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhH
Q 011369 127 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 206 (487)
Q Consensus 127 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~ 206 (487)
++.-.-|.++.+++.||+|||+.+..+.++++++.++...+.+-..+.+.-+..-+..++.+.+.++|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 44556788999999999999999999999999999887776543333333333333344566778999999999999999
Q ss_pred HHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhcc
Q 011369 207 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 207 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
..|.-..+.-+|.++.|.++ ...+ .+-..+..+.+.+.++.++...+++
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeee
Confidence 99999999999999999998 3322 2233556666677677777666664
No 217
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.77 E-value=1.5e-08 Score=95.80 Aligned_cols=118 Identities=16% Similarity=0.151 Sum_probs=104.3
Q ss_pred Cc-cccccccC-ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch---hHHHHHHHHHHh
Q 011369 106 SG-IQGDFKLN-NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLV 180 (487)
Q Consensus 106 ~~-i~~~~~~s-~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~---~~~~l~~~r~l~ 180 (487)
|. +.+++|.+ ..+.+++.++..++..++.++.|+++||+|+|+...+......++.+...+.. +....++.-++.
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T PF07690_consen 230 PLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLI 309 (352)
T ss_dssp HHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHH
T ss_pred chhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 44 48889999 78999999999999999999999999999998888888777777777666554 457778888999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHH
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 223 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 223 (487)
|++.+...+....++.|.+|+++||++.|+.+...++|..+||
T Consensus 310 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 310 GFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999999999999999999999999999887
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.77 E-value=1.6e-07 Score=94.19 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=122.8
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHHHHHHHHHHHhhcch--------hHHHHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF--------DFWSIAICRM 178 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~a~--------~~~~l~~~r~ 178 (487)
+.+.+|.+......+...+....-+..+++|.++|+ +||++.+.++.++..+|.++.+++. ....++++-.
T Consensus 14 l~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa 93 (654)
T TIGR00926 14 FLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA 93 (654)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH
Confidence 456678888888888888888889999999999998 5999999999999999988877642 1234667888
Q ss_pred HhhhhhhhhhhhhhhhhhhcCCCC---chhHHHHHHHhhhhhhhhhHHHHHHhhccc-------cchHHHHHHHHHHHHH
Q 011369 179 LVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLP 248 (487)
Q Consensus 179 l~G~g~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~~wr~~f~~~~~~~~~ 248 (487)
+..+|.|++-|...+...|.++++ +|-..+.++..+.++|+.+++++...+.+. .+|...|.+.++..++
T Consensus 94 Lia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~i 173 (654)
T TIGR00926 94 LIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMIL 173 (654)
T ss_pred HHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHH
Confidence 889999999999999999999754 367788899999999999999998888643 3699999999888777
Q ss_pred HHHHHhhc
Q 011369 249 FAVLAFVI 256 (487)
Q Consensus 249 ~~~~~~~~ 256 (487)
..++....
T Consensus 174 a~lvf~~g 181 (654)
T TIGR00926 174 ALIVFMAG 181 (654)
T ss_pred HHHHHHHh
Confidence 66655443
No 219
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.76 E-value=4.9e-08 Score=89.84 Aligned_cols=125 Identities=15% Similarity=0.136 Sum_probs=97.6
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCCeEehhH-HHHHHHHHHHhhcchhHHH--------
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFRLIGVG-LSVWTFATAGCGSSFDFWS-------- 172 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~-~~~~~~~~~~~~~a~~~~~-------- 172 (487)
+++.+++|++....+.+--.--+...+.+++.|..+|| |||||.++.. .+...++.++.+++.++..
T Consensus 56 tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~ 135 (498)
T KOG0637|consen 56 TPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERK 135 (498)
T ss_pred cHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCccc
Confidence 77778899999888888888888888999999999996 8988765554 5566677777777665433
Q ss_pred ---------HHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhH-HHHHHHhhhhhhhhhHHHHHHhhc
Q 011369 173 ---------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 173 ---------l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l~ 230 (487)
++++--+.=++.-.....+.+++.|....+++.+ +++.+....++|..+|..++++..
T Consensus 136 ~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 136 PVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred ccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 3333344445666777889999999998777766 999999999999999999887443
No 220
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.74 E-value=1.5e-07 Score=84.33 Aligned_cols=151 Identities=19% Similarity=0.123 Sum_probs=124.1
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
|.+-.|-|+|+.+.|+..+...+.....++....+++|. .+|+..+....++.++.+.+.+.+.-..+.- -++.|+|.
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~ 310 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQ 310 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCcc
Confidence 889999999999999999999999999999999999975 5788888888888888888888775443333 49999999
Q ss_pred hhhhhhhhhhhhhcCCC-CchhHHHHHHHhhhhhhhhhHHHHHHhhcccc-chHHHHHHHHHHHHHHHHHHhhcc
Q 011369 185 ASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~ 257 (487)
|..++.+...+.+..+. ++-++-.++.|....+=...||.+.|++-|.. +|+.++...+...+...+..+..-
T Consensus 311 G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 311 GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999888764 44556666667766666778999999998765 699999988888777776666553
No 221
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.72 E-value=1.8e-07 Score=89.45 Aligned_cols=120 Identities=14% Similarity=0.066 Sum_probs=88.7
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh---hc-chhHHHHHHHHHHhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GS-SFDFWSIAICRMLVGVG 183 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~-a~~~~~l~~~r~l~G~g 183 (487)
+.+++|.++.+.+++.+...++..++.++.|++.||+|||+.+..+.++..+..+.. .. ..+++.+.++-.+.+.+
T Consensus 221 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (377)
T PRK11102 221 YIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGC 300 (377)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 456689999999999999999999999999999999999999888876644433222 22 23455555555566666
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhh-hhhhhhhHHHHHHh
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMC-IPTGVALGYVYGGV 228 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~G~~~g~~~~~~ 228 (487)
.+........++.|..| ++++++.++.... ..+|..+++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 301 VSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 66666667777888777 7899999987554 45677777776543
No 222
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=1.1e-07 Score=93.65 Aligned_cols=128 Identities=18% Similarity=0.075 Sum_probs=99.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc-----chhHHHHHHHHHHhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGV 182 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----a~~~~~l~~~r~l~G~ 182 (487)
..++...++...+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+ .++.+.+++.-++.|+
T Consensus 257 ~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~ 336 (473)
T PRK10429 257 YFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNI 336 (473)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHH
Confidence 33333334556677777777889999999999999999999998888776665554432 3567777888889999
Q ss_pred hhhhhhhhhhhhhhhcCC-------CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 183 GEASFISLAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
+.+...+...++++|..+ +++.|..++......-+|..+++.+.|.+.+..|+
T Consensus 337 ~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 337 GTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999966 34456689999999999999999999887754443
No 223
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.72 E-value=1.3e-07 Score=90.47 Aligned_cols=135 Identities=10% Similarity=-0.129 Sum_probs=99.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh-cc-----hhHHHHHHHHHHhhhhhhhhhhhhhhhhh
Q 011369 123 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-SS-----FDFWSIAICRMLVGVGEASFISLAAPFID 196 (487)
Q Consensus 123 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~a-----~~~~~l~~~r~l~G~g~g~~~~~~~~~i~ 196 (487)
..+..+...+..+++|+++||+|+|+++.++.+...++..... .. .+++.+.+.-+...++.|........++.
T Consensus 292 ~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip 371 (462)
T PRK15034 292 AFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIA 371 (462)
T ss_pred HHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhH
Confidence 3445677888899999999999999999988887766654321 11 35666666665555666666666777887
Q ss_pred hcCCC---------------------CchhHHHHHHHhhhhhhhhhHHHHHHhhccc-cchHHHHHHHHHHHHHHHHHHh
Q 011369 197 DNAPV---------------------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 197 ~~~~~---------------------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
+++|+ ++-|.+.|+......+|..+-|.+-+...+. -++...|+...+..+++.++.+
T Consensus 372 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 372 VIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 87774 1567888999999999888888766665544 3588889999888888887777
Q ss_pred hcc
Q 011369 255 VIK 257 (487)
Q Consensus 255 ~~~ 257 (487)
+..
T Consensus 452 ~~y 454 (462)
T PRK15034 452 LVY 454 (462)
T ss_pred HHh
Confidence 665
No 224
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.70 E-value=2.1e-08 Score=88.52 Aligned_cols=329 Identities=12% Similarity=0.013 Sum_probs=204.4
Q ss_pred cccccCccccc-hhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhh
Q 011369 110 GDFKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 110 ~~~~~s~~~~~-~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
.|.|++..++. -+.-.-.-.+.+.-++.=.+.|..-.|++++.-.+.......+.-+.++.+.+=+.-++.|...+ ..
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aE 112 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AE 112 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HH
Confidence 34466655432 22223334455566666678999999999999888888888899999999999999999999877 66
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc--chHHHHHHHHHHHHHHHHHHhhccccccCCC--
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGF-- 264 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~-- 264 (487)
.+.++++-+.++++++.++.+...+..-.|..+|..++..+++.. +++..=.+.-....+..++.+++ |..++..
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fL-P~v~rSl~f 191 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFL-PRVKRSLYF 191 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhC-CCCchhhhh
Confidence 778999999999999999999999999999999999999888643 33444344433333333444444 3321110
Q ss_pred CCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 265 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
++.++ +.. ..+.+ +...+....+ .........++++....+||.++.-.+-+.+...
T Consensus 192 ~~~~~-~~~-----v~~~e----------~~~~~~~~~~-------~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~sc 248 (433)
T KOG3810|consen 192 HRLED-KIS-----VGDLE----------EMNPQASYMS-------YLRGAFVLLWRDLQECYSNPRLLKWSLWWALASC 248 (433)
T ss_pred hcccc-cce-----eccch----------hcCccchhhH-------HHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhc
Confidence 00000 000 00000 0000000000 0002233445667777888888777777777666
Q ss_pred hheeeeecccceeeecccccccceeee---ceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADMMFG---GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 421 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (487)
+++-+..|....-++.- -++.....+ ++..+.++++.+..|.+--.+.|+.. .++..+....+...++.....
T Consensus 249 g~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~---~ll~~~s~~~agllf~m~~t~ 324 (433)
T KOG3810|consen 249 GYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD---LLLAVGSAVQAGLLFIMAQTQ 324 (433)
T ss_pred hhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhH---HHHHHHHHHhhhhhhhhhccc
Confidence 66666555444333322 111111211 34445667777777877655555432 455555555566666666667
Q ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHH
Q 011369 422 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 468 (487)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~ 468 (487)
+.|+..+...++...+....+....-++.+...+.-|...|++ .+.
T Consensus 325 ~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiN-TFv 370 (433)
T KOG3810|consen 325 HIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGIN-TFV 370 (433)
T ss_pred ceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehH-HHH
Confidence 7787777777777777777776666677778788888888885 444
No 225
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.69 E-value=1.2e-07 Score=89.42 Aligned_cols=305 Identities=11% Similarity=0.022 Sum_probs=180.3
Q ss_pred chh-hhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhc
Q 011369 120 GVL-SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 198 (487)
Q Consensus 120 ~~~-~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 198 (487)
|+. .++.+..+.++.++.+.+.|+.|.|+.++++...+....+..-+ +|-+.++..-.+.|+|.+..+..-..+++|.
T Consensus 52 Gy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~ 130 (461)
T KOG3098|consen 52 GYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSN 130 (461)
T ss_pred cHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhc
Confidence 444 67888888999999999999999999999999999887776666 5577788999999999999999999999999
Q ss_pred CCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc--------cchH-HH----------HHHHHHHHHHHHHHH--hhcc
Q 011369 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-YA----------FWGEAILMLPFAVLA--FVIK 257 (487)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--------~~wr-~~----------f~~~~~~~~~~~~~~--~~~~ 257 (487)
.++|.+.+..++.......+.++|..+-..+..+ .+-+ .. ..+.+++..+..+.. ....
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999999999888887665433211 1111 11 111111111111100 0011
Q ss_pred ccccCCCCCCCcccchhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHH
Q 011369 258 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 337 (487)
Q Consensus 258 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (487)
|..... .+ ++.. + ....+..+..-++++++..+....
T Consensus 211 p~~~~~---~~-~~~~-------------------~--------------------~~~~~~l~~~~~l~~~~~ml~L~~ 247 (461)
T KOG3098|consen 211 PSKDVV---NC-KSSS-------------------E--------------------TSFSELLKLTFKLLKTPKMLLLFP 247 (461)
T ss_pred Cccchh---hh-hhhc-------------------c--------------------ccHHHHHHHHHHHhcCHhHHHHHH
Confidence 110000 00 0000 0 011222333445667777777666
Q ss_pred HHHHHHhhheeeeecccceeeec--ccccccce--eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHH
Q 011369 338 GYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 413 (487)
Q Consensus 338 ~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 413 (487)
..+..+..........|..+.-. .+.+.... ......+++.+++....+.+.+|.++.... +.+.++..+....
T Consensus 248 ~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~ 325 (461)
T KOG3098|consen 248 FFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIG 325 (461)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHH
Confidence 66665555444444445543322 22221111 222334455566666666666665443222 4444444444444
Q ss_pred HHHHHHH------------------HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhc
Q 011369 414 CLTAFCL------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (487)
Q Consensus 414 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (487)
+++.... ++.....+..++.|++-+......+..+.... ++.|..+.++. -....++
T Consensus 326 ~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~-kfyq~~~ 400 (461)
T KOG3098|consen 326 FLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLF-KFYQSVA 400 (461)
T ss_pred HHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHH-HHHHHHH
Confidence 3333221 12345666777788888877777777777777 66777777775 3333333
No 226
>PRK09669 putative symporter YagG; Provisional
Probab=98.69 E-value=1.3e-07 Score=92.49 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=94.2
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh-c-chhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 011369 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-S-SFDFWSIAICRMLVGVGEASFISLAAPF 194 (487)
Q Consensus 117 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-~-a~~~~~l~~~r~l~G~g~g~~~~~~~~~ 194 (487)
+..+.+.....+...++.+++++++||+|+|+.+.++.++..++.+... . .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566667788888999999999999999999888876665433222 2 3577788888999999999999999999
Q ss_pred hhhcCCC-------CchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 195 IDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 195 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
++|..+. ++.|...+.......+|..+|+.+++.+.+..|+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998862 3346778899999999999999999988766555
No 227
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.66 E-value=3.1e-08 Score=89.43 Aligned_cols=149 Identities=12% Similarity=0.110 Sum_probs=124.4
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC--CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
+.+.+..+..++|+..--..+.+.++..+.|.++||++ |-.....++++.++.+....+++++.++++-++..|++.+
T Consensus 297 m~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~ 376 (464)
T KOG3764|consen 297 MLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIG 376 (464)
T ss_pred HHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHH
Confidence 55667766778998888899999999999999999999 5444555666677777777889999999999999999998
Q ss_pred hhhhhhhhhhhhcCCCC------chhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 186 SFISLAAPFIDDNAPVP------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
...........+....+ --|...++...++++|..+||.++|.+.+..|++|.-.+.++..++...+..++
T Consensus 377 ~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 377 LADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777777766666543 346889999999999999999999999999999999999999888877766555
No 228
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.65 E-value=1.5e-07 Score=92.92 Aligned_cols=140 Identities=11% Similarity=0.095 Sum_probs=107.1
Q ss_pred cchhhhHHHHHHHHHHHHH----HHhhhhcCCCeEehhHHHHHHHHHHHhhcchh---------HHHHHHHHHHhhhhhh
Q 011369 119 DGVLSSAFMVGLLVASPIF----ASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---------FWSIAICRMLVGVGEA 185 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~----g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~---------~~~l~~~r~l~G~g~g 185 (487)
.+++.++..+...+..++. +++.+|++.++.+.+|.++.+++.+..+++.+ .++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4566666776666666666 55666666667788899999999888776655 5689999999999999
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc----------ccchHHHHHHHHHHHHHHHHHHhh
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
...|...+++.+..|++.||+++|++.....+|..++..+.+.... ..+..+.|...++..++.+++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888888777766643221 123678888888877666655555
Q ss_pred ccc
Q 011369 256 IKP 258 (487)
Q Consensus 256 ~~p 258 (487)
..|
T Consensus 478 ~~~ 480 (500)
T PRK09584 478 TAP 480 (500)
T ss_pred HHH
Confidence 444
No 229
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.64 E-value=3.1e-09 Score=102.69 Aligned_cols=153 Identities=14% Similarity=-0.014 Sum_probs=106.4
Q ss_pred cchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhh-cccchhhhHHHHH
Q 011369 328 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSA 405 (487)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~ 405 (487)
..+.++......+...+.+++...++|.|+++..|++.... .+.........++.+++|+++||+ ||| +.+.+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~ili 81 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVML 81 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHH
Confidence 34556666666667777888888899999988888887666 444555677788999999999999 998 67777
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCC--chhHHHHHHHHHHHhhcCCCccceeee
Q 011369 406 ATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGV 482 (487)
Q Consensus 406 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~r~~~~g~~~~~~~~~g~~~~p~~~g~ 482 (487)
+.++..+..++..... +.........+..++.+...+....++.+.+|++ .|.++.++.....+ +|+.++|.+.|+
T Consensus 82 G~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~n-lG~~iap~l~g~ 160 (493)
T PRK15462 82 GALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGN-VGSIIAPIACGY 160 (493)
T ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHH-HHHHHHHHHHHH
Confidence 7776666654443222 1122233333344445555565667788888874 79999999855555 688899999998
Q ss_pred eecc
Q 011369 483 LQVC 486 (487)
Q Consensus 483 l~~~ 486 (487)
+.+.
T Consensus 161 L~~~ 164 (493)
T PRK15462 161 AQEE 164 (493)
T ss_pred HHhh
Confidence 8653
No 230
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.62 E-value=2.1e-07 Score=89.47 Aligned_cols=130 Identities=9% Similarity=-0.098 Sum_probs=100.7
Q ss_pred ccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhh
Q 011369 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 192 (487)
Q Consensus 113 ~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~ 192 (487)
+.+....+...+.+..+..++.++++++.||+++|+++.++..+..+..++..+.++... ..+-++.|++.+..+|...
T Consensus 265 ~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~i~ 343 (410)
T TIGR00885 265 GMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPTIY 343 (410)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHH
Confidence 333344455667777888999999999999999999999999988888888888777544 5777788899999999999
Q ss_pred hhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc------chHHHHHHHHHH
Q 011369 193 PFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL------NWRYAFWGEAIL 245 (487)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------~wr~~f~~~~~~ 245 (487)
++..+..+++.+ .+.+...++ .+|..+.|++.|.+.|.. +.+..|++..++
T Consensus 344 sl~~~~~g~~~~-~~s~~l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 344 GIALKGLGQDTK-YGAAGLVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred HHHHhhhhhhhh-hhHHHHHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 999999986543 333333333 399999999999999854 477888876444
No 231
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.60 E-value=8.3e-09 Score=98.17 Aligned_cols=143 Identities=17% Similarity=0.102 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHH
Q 011369 332 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 410 (487)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 410 (487)
++..++..+........+..+.|.++++.++.+..+. .+.....++..++.++.|+++||+||| +.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 77 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLLL 77 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 4555666666666677777888877777789887776 566677788999999999999999999 7777777777
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceee
Q 011369 411 AISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 481 (487)
Q Consensus 411 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g 481 (487)
.+..+.....+ +.+.+++..++.+++.+ .+.+...++.+..|+++|+.+.++. .....+|..+++.+.+
T Consensus 78 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 78 AIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLA-AGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHH-HHHhHHHHHHHHHHHH
Confidence 77777666666 77766666666666643 4455666778888889999999986 4444445555554443
No 232
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.57 E-value=6e-06 Score=74.36 Aligned_cols=352 Identities=9% Similarity=-0.038 Sum_probs=184.7
Q ss_pred hhHHHHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhh---
Q 011369 66 LLVIFCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK--- 142 (487)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d--- 142 (487)
-+..+.+.+.+.+...+..+. +|.+-+.=|.|..+.+...-++. -...-+.|.++.|
T Consensus 32 ~illLl~LYllQGiP~GL~~~------------------iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y 91 (510)
T KOG3574|consen 32 SILLLLFLYLLQGIPLGLIGA------------------IPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVY 91 (510)
T ss_pred hHHHHHHHHHHcCCchhHhhh------------------hHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHH
Confidence 455555666776666665552 37777777777776655433322 1234678888999
Q ss_pred --hcCCCeEeh-hHHHHHHHHHHHhhc-----------chhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHH
Q 011369 143 --SHNPFRLIG-VGLSVWTFATAGCGS-----------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (487)
Q Consensus 143 --r~Grr~~l~-~~~~~~~~~~~~~~~-----------a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~ 208 (487)
|+||||.-+ -+..+.+....+.+. .++...+...-++.-+..+..-.+.-.+.-.+..+++.|-+.
T Consensus 92 ~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaS 171 (510)
T KOG3574|consen 92 SKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYAS 171 (510)
T ss_pred HHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchh
Confidence 999998643 344444444444332 345555555556666777777777777877888888887777
Q ss_pred HHHHhhhhhhhhhHHHHHHhhcc-------ccchH---------HHHHHHHHHHHHHHHHHhhccccccCCCCCCCcccc
Q 011369 209 SMFYMCIPTGVALGYVYGGVVGS-------HLNWR---------YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 272 (487)
Q Consensus 209 ~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr---------~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 272 (487)
.....+...|..++..+--.+.+ ..+|. ...++.+.+.++.-.+..+.-.|......++++
T Consensus 172 T~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~--- 248 (510)
T KOG3574|consen 172 TCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELE--- 248 (510)
T ss_pred HHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhh---
Confidence 66666666666665543222221 01121 223333344344334433332221100000000
Q ss_pred hhhcccccCcccCCCcccccccchhhhhhhhhccccccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeec
Q 011369 273 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 352 (487)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (487)
.+..+..+.++.+++-|.....+......-.++.+-...
T Consensus 249 -----------------------------------------~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~ 287 (510)
T KOG3574|consen 249 -----------------------------------------LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADAL 287 (510)
T ss_pred -----------------------------------------cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhc
Confidence 112223345566677676666666666666666666665
Q ss_pred ccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccchhh---hHHHHHHHHHHHHHHHHHHHHHH-------
Q 011369 353 GPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNA---FKLLSAATFLGAISCLTAFCLSS------- 422 (487)
Q Consensus 353 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------- 422 (487)
.+.-+.+ .|.+...... ..+..++..++.++...|+-...++. .+-+..=.........+.+..++
T Consensus 288 t~LkLle-~Gv~ke~Lal---~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~ 363 (510)
T KOG3574|consen 288 TSLKLLE-HGVPKEELAL---IAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGT 363 (510)
T ss_pred cchHHHH-cCCChhHhee---eeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCc
Confidence 5665655 5666544422 22455556666666666654321110 00111111111111122222111
Q ss_pred -----HHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 423 -----LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 423 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
....+....+.+.+....+...++..++..+|...|+-+.+.|...+. |+-.-..+++++.|.
T Consensus 364 ~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 364 FPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADG 431 (510)
T ss_pred eeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhccc
Confidence 112222234445555555555677788889999999999998555455 554444444555553
No 233
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.56 E-value=5.3e-07 Score=88.56 Aligned_cols=139 Identities=17% Similarity=0.179 Sum_probs=109.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCCCeE-------ehhHHHHHHHHHHHh-----hc-----chhHHHHHHHHHHhhh
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRL-------IGVGLSVWTFATAGC-----GS-----SFDFWSIAICRMLVGV 182 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~-------l~~~~~~~~~~~~~~-----~~-----a~~~~~l~~~r~l~G~ 182 (487)
+++.+...+...+..++.+++.||+|+|+. +.+|.++.+++.+.. .+ ..++++++..-++.|+
T Consensus 312 ~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~ 391 (489)
T PRK10207 312 VSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSL 391 (489)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 556666777888899999999999999985 777777776665422 11 1357888899999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc----------ccchHHHHHHHHHHHHHHHHH
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFAVL 252 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~~wr~~f~~~~~~~~~~~~~ 252 (487)
|.+...+....++.+..|++.++.++|++....++|..+|..++..... .-...+.|...++..++..++
T Consensus 392 Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~ 471 (489)
T PRK10207 392 GELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVV 471 (489)
T ss_pred HHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988865531 112567788777777776666
Q ss_pred Hhhccc
Q 011369 253 AFVIKP 258 (487)
Q Consensus 253 ~~~~~p 258 (487)
.++..|
T Consensus 472 ~~~~~~ 477 (489)
T PRK10207 472 MALMVP 477 (489)
T ss_pred HHHHHH
Confidence 665544
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.54 E-value=3.1e-09 Score=104.14 Aligned_cols=153 Identities=12% Similarity=0.041 Sum_probs=106.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh--c--ch------hHHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--S--SF------DFWSIAI 175 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--a~------~~~~l~~ 175 (487)
+.+.++.+.+.. -+......+...++.+....+.||+|||++++.+..+.+++.+..+ . .+ +...+..
T Consensus 277 ~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 354 (451)
T PF00083_consen 277 PSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVF 354 (451)
T ss_pred cccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 666777777666 2222233344556666777999999999999999999888877765 1 11 1222222
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
.....-.......+....+..|.+|.+.|.+..++......++..+++.+...+.+..+-...+++.+++.++..+..++
T Consensus 355 ~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~ 434 (451)
T PF00083_consen 355 LALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYF 434 (451)
T ss_pred eeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeE
Confidence 22221122223456677889999999999999999999999999988888777776655345667777777777777788
Q ss_pred ccccc
Q 011369 256 IKPLQ 260 (487)
Q Consensus 256 ~~p~~ 260 (487)
+.||+
T Consensus 435 ~lpET 439 (451)
T PF00083_consen 435 FLPET 439 (451)
T ss_pred EEeeC
Confidence 88884
No 235
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.53 E-value=1.4e-06 Score=83.85 Aligned_cols=128 Identities=10% Similarity=0.032 Sum_probs=97.5
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHH-HHHHHHHHhhc--chhHHHHHHHHHHhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS-VWTFATAGCGS--SFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~-~~~~~~~~~~~--a~~~~~l~~~r~l~G~g~ 184 (487)
+.+.+|.++.+.+++.....++..++.++.+++.||++++........ +..+....... ..+.+.+.+..++.|++.
T Consensus 234 ~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 234 MGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 444588899999999999999999999999999999984332222222 22222222222 346677888899999999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchH
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWR 236 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr 236 (487)
+...+....+..|.+| ++++.+.++.+....+|..+++.+++.+.....+.
T Consensus 314 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 314 GMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHH
Confidence 9999999999999987 58899999999999999999999999887654443
No 236
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.52 E-value=8.6e-07 Score=71.28 Aligned_cols=115 Identities=9% Similarity=0.096 Sum_probs=96.8
Q ss_pred cCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 114 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 114 ~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
+++..--.-.++.+....+..++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..+++...
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ 112 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT 112 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH
Confidence 344343444567777888899999999999999999999999988655443 5678899999999999999999999999
Q ss_pred hhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhh
Q 011369 194 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (487)
Q Consensus 194 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 229 (487)
++.+..++++|++..+++......+.++|.++...+
T Consensus 113 ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 113 YLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888888776544
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.49 E-value=2.4e-06 Score=78.60 Aligned_cols=148 Identities=20% Similarity=0.183 Sum_probs=124.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhh-hcCCCeEehhHHHHHHHHHHH---hhcchhHHHHHHHHHHhh
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-SHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVG 181 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~---~~~a~~~~~l~~~r~l~G 181 (487)
|.=.+-||++..+...++.....|..++....|++.. |.++|+...+++....++..+ .+...+.+.+...-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 5555668999999999999999999999999999988 677788777888877766655 345568899999999999
Q ss_pred hhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc----------ccchHHHHHHHHHHHHHHHH
Q 011369 182 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 182 ~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~----------~~~wr~~f~~~~~~~~~~~~ 251 (487)
++.|.+.....+.+.+...+++.|..+|.+.....++..++..+++.+.| ..+|-.+|.+.++..++..+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987653 23577888888776555544
Q ss_pred HH
Q 011369 252 LA 253 (487)
Q Consensus 252 ~~ 253 (487)
+.
T Consensus 393 ll 394 (403)
T PF03209_consen 393 LL 394 (403)
T ss_pred HH
Confidence 43
No 238
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.43 E-value=7e-07 Score=86.09 Aligned_cols=150 Identities=9% Similarity=0.059 Sum_probs=102.0
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCC---------eEehhHHHHHHHHHHHhhcchhHHH-HHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF---------RLIGVGLSVWTFATAGCGSSFDFWS-IAIC 176 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr---------~~l~~~~~~~~~~~~~~~~a~~~~~-l~~~ 176 (487)
.+.+-+|.+-.+.|++.++..+...+..+++|.++||.-+| ..-.++....+++.+..++.++-.. +.+.
T Consensus 284 Y~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~ 363 (466)
T KOG2532|consen 284 YLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVI 363 (466)
T ss_pred HHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHH
Confidence 35667899999999999999999999999999999998553 2233444455555555666553111 1111
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc---ccchHHHHHHHHHHHHHHHHHH
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
-+..+.+..+....+...-.....+++-+..+|+.+....+..+++|.+.+.+.+ ...||++|++.+++.++..++.
T Consensus 364 ~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f 443 (466)
T KOG2532|consen 364 LLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIF 443 (466)
T ss_pred HHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhe
Confidence 1112222222222222222222145789999999999999999999999999984 2479999999999877766554
Q ss_pred hhc
Q 011369 254 FVI 256 (487)
Q Consensus 254 ~~~ 256 (487)
.++
T Consensus 444 ~~f 446 (466)
T KOG2532|consen 444 LFF 446 (466)
T ss_pred eEe
Confidence 444
No 239
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.42 E-value=1e-07 Score=76.66 Aligned_cols=109 Identities=14% Similarity=0.117 Sum_probs=85.5
Q ss_pred ceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEee
Q 011369 372 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (487)
....++..++.+..+++.||++|| +.+........+..+.....++.+......++.+++.+...+....+..+.
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 455677888999999999999998 666666666666655555556666677777788888777777778888899
Q ss_pred cCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 452 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 452 ~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
.|+++|+++.++. .....+|..++|.+.|++.+.
T Consensus 80 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~ 113 (141)
T TIGR00880 80 YPPEERGVALGLM-SAGIALGPLLGPPLGGVLAQF 113 (141)
T ss_pred CChhhhhHHHHHH-HHhHHHHHHHhHHhHHHHhcc
Confidence 9999999999997 667777888999998887653
No 240
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.38 E-value=4.8e-06 Score=78.89 Aligned_cols=125 Identities=17% Similarity=0.105 Sum_probs=102.9
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA 185 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g 185 (487)
..--+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++.-+.+ +.+.+++..++.++|.+
T Consensus 263 ~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~ 342 (467)
T COG2211 263 VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTG 342 (467)
T ss_pred EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhh
Confidence 3334566666677778888888888899999999999999999999999999999888776 78899999999999999
Q ss_pred hhhhhhhhhhhhcCCC-------CchhHHHHHHHhhhhhhhhhHHHHHHhhccc
Q 011369 186 SFISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 232 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 232 (487)
...+...++++|..+. ++-|...+......=+|..++..+.++..+.
T Consensus 343 ~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 343 IANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred ccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988753 3346777777777778888888777666543
No 241
>PRK11462 putative transporter; Provisional
Probab=98.34 E-value=3.5e-06 Score=82.42 Aligned_cols=120 Identities=10% Similarity=0.022 Sum_probs=83.3
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch--hHHHHHHHHHHhhhhhhhhhhhhhh
Q 011369 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAP 193 (487)
Q Consensus 116 ~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~G~g~g~~~~~~~~ 193 (487)
+...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.+ +...+++.-++.|++.+...+...+
T Consensus 262 ~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~ 341 (460)
T PRK11462 262 PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWV 341 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456677788888999999999999999999887655554444333333322 2334455556778888777777777
Q ss_pred hhhhcCC-------CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 194 FIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 194 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
+++|..+ +++.|..++......-+|..+++.+++.+.+..|+
T Consensus 342 m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 342 MMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8887766 33446666777788888888888888877654333
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.31 E-value=6.2e-06 Score=81.07 Aligned_cols=110 Identities=15% Similarity=0.056 Sum_probs=88.8
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhhhcCCC-eEehhHHHHHHHHHHHhhc--chhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 011369 118 QDGVLSSAFMVGLLVASPIFASLAKSHNPF-RLIGVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVGEASFISLAAPF 194 (487)
Q Consensus 118 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr-~~l~~~~~~~~~~~~~~~~--a~~~~~l~~~r~l~G~g~g~~~~~~~~~ 194 (487)
..++....+.++..+++.+.|.+..+++|- +.++++.++..++..+++. .+|....+..-++.|++.|.........
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~ 429 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVI 429 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHe
Confidence 578888899999999999999999988864 4556776666654433333 3466667788899999999998888888
Q ss_pred hhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHH
Q 011369 195 IDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 227 (487)
Q Consensus 195 i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 227 (487)
+.-..|+++-+.+.++..+.-.+|+.+|..+..
T Consensus 430 ~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 430 AQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred eEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 888899999999999999999998888877653
No 243
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.29 E-value=2.9e-06 Score=77.41 Aligned_cols=142 Identities=15% Similarity=0.117 Sum_probs=116.3
Q ss_pred Cccccc-cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
+.+..| .|.++.+.+...+.+..+..+|.+++.++..|+...|.+.+..++..+-++..+++++...+ .+-++.|+..
T Consensus 260 ~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~~-~~l~~ig~F~ 338 (422)
T COG0738 260 VSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVAL-YALFLIGLFN 338 (422)
T ss_pred HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHHH-HHHHHHHHHh
Confidence 334444 78899999999999999999999999999999999999999999988888999999985544 4557789999
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHH
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 250 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~ 250 (487)
+..+|...+...+..| +.....|..-....+|..+-|.+-|++.+..|-...+.+...++.+..
T Consensus 339 simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 339 SIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999998 333445555666778999999999999999998888775544444433
No 244
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.28 E-value=9.7e-06 Score=78.37 Aligned_cols=141 Identities=15% Similarity=0.028 Sum_probs=114.2
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCC-CeEehhHHHHHHHHHHHhhcchh---------------------HHHHHHHH
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFD---------------------FWSIAICR 177 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~a~~---------------------~~~l~~~r 177 (487)
.|....+.+...+.+++.-++.+|+|+ |++..++.++.+++.+...+.++ .+..++.-
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 344455666666778888899999995 66668898888888777765443 37788888
Q ss_pred HHhhhhhhhhhhhhhhhhhhcCCC--CchhHHHHHHHhhhhhhhhhHHHHHHhhccccc--hHHHHHHHHHHHHHHHHHH
Q 011369 178 MLVGVGEASFISLAAPFIDDNAPV--PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 178 ~l~G~g~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~ 253 (487)
.+.|+..+..+..-++++++..++ ++.|..+|+++.+..+.+++..+..|.+.+.+| -.+.+.+.++..++.++..
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999995 456999999999999999999987777554433 5678899999999999999
Q ss_pred hhccccc
Q 011369 254 FVIKPLQ 260 (487)
Q Consensus 254 ~~~~p~~ 260 (487)
++.+|+.
T Consensus 468 ~~~~~~~ 474 (477)
T TIGR01301 468 LILLPRP 474 (477)
T ss_pred HHhCCCC
Confidence 9998874
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.22 E-value=1.5e-05 Score=79.29 Aligned_cols=154 Identities=11% Similarity=-0.037 Sum_probs=103.9
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhH-------------HH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF-------------WS 172 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~-------------~~ 172 (487)
+.+-+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.++.+..... ..
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLA 397 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHH
Confidence 5666666766444 555566667777788888999999999999999999999999887754221 12
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHH-
Q 011369 173 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV- 251 (487)
Q Consensus 173 l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~- 251 (487)
+...-+..........+....+.+|.+|.+-|+++.++......+...+-...-..+....++...|...+..+.+..+
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 2222223333333355666778999999999999999887766655544333333333333346677777777666666
Q ss_pred HHhhccccc
Q 011369 252 LAFVIKPLQ 260 (487)
Q Consensus 252 ~~~~~~p~~ 260 (487)
..++..||+
T Consensus 478 fv~~~~pET 486 (513)
T KOG0254|consen 478 FVFFFVPET 486 (513)
T ss_pred HheEEcccC
Confidence 677777874
No 246
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.21 E-value=3.3e-07 Score=86.41 Aligned_cols=123 Identities=12% Similarity=-0.014 Sum_probs=104.3
Q ss_pred ccceeeecccccccc-e-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 353 GPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 430 (487)
Q Consensus 353 ~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (487)
...++.+.+|++..+ . .+......+..+..+.+|++.||+|.| +++..+.+.-.+..++.....+...+.+.-
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333555578888777 5 566677788999999999999999999 888888888888888888888888899999
Q ss_pred HHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeee
Q 011369 431 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 482 (487)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~ 482 (487)
++.|++.+..+ ....++.+.+|+++|+++.|+. .....+|.++++++.++
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~-~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYS-RAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999999888 8899999999999999999997 66777788888888776
No 247
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.13 E-value=3.4e-05 Score=74.52 Aligned_cols=142 Identities=15% Similarity=-0.010 Sum_probs=94.3
Q ss_pred Ccc-ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh-----cchhHHHHHHHHHH
Q 011369 106 SGI-QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG-----SSFDFWSIAICRML 179 (487)
Q Consensus 106 ~~i-~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~-----~a~~~~~l~~~r~l 179 (487)
|.+ ++.+|.++.+.++.......+..++..+.+++.++.++++.+.....+..++.++.. ..++++.+++..++
T Consensus 242 P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l 321 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSL 321 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHH
Confidence 544 455689999999998888888888888888877555444443322222223322222 23344456788888
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHH
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 249 (487)
.|+|.+...|......-+ -....+|++.++.+.....+..+++..++++.++ +=++.|...+++..+.
T Consensus 322 ~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 322 YAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 999999888877753321 1223579999999888888888888888888765 4466666665554443
No 248
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.09 E-value=0.00073 Score=63.92 Aligned_cols=152 Identities=8% Similarity=0.026 Sum_probs=82.9
Q ss_pred hhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHhhhcccc
Q 011369 317 SQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATI 396 (487)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 396 (487)
++..+.+.+++|-|.+..+++.....-.++.+...-...=+.+ .|++..... +..+..+...++.++++.|+-+.+
T Consensus 265 ~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LA---l~~li~~P~qii~~~~~~Kws~g~ 340 (544)
T PF13000_consen 265 KDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLA---LLVLIDFPFQIILPYYIGKWSAGS 340 (544)
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhH---HHHHHhhhHHHHHHHHhhhhhcCC
Confidence 3444556667788887777777777666665554444444444 466655542 223455566777777777764433
Q ss_pred hhh--------------------------hHHHHHHHHHHHHHHHHH----HHHH--------HHHHHHHHHHHHHHHHh
Q 011369 397 SNA--------------------------FKLLSAATFLGAISCLTA----FCLS--------SLYGFLALFTVGELLVF 438 (487)
Q Consensus 397 ~~~--------------------------~~~~~~~~~~~~~~~~~~----~~~~--------~~~~~~~~~~~~~~~~~ 438 (487)
++. .+..+.+...-.+..++. ...+ -...+++...+..+...
T Consensus 341 ~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~st 420 (544)
T PF13000_consen 341 PPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMST 420 (544)
T ss_pred CccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 210 011111111111111111 1111 11223333445555555
Q ss_pred ccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhc
Q 011369 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (487)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (487)
..+....+.-++..+|..-|+.+.+.|+..|..|
T Consensus 421 vmFVai~AFharISDP~IGGTYMTLLNTvSNLGG 454 (544)
T PF13000_consen 421 VMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGG 454 (544)
T ss_pred HHHHHHHHHHhhccCcccchHHHHHHHHHHhcCC
Confidence 6667778888888999999999999866656544
No 249
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.06 E-value=3.7e-06 Score=78.06 Aligned_cols=121 Identities=11% Similarity=0.111 Sum_probs=97.5
Q ss_pred cccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011369 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (487)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (487)
.++.++... .+.....+...+++++.|++.||++|+ .++..+..+-.+..+........|.++++=.+.|++.+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeA 136 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEA 136 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 356665555 566677788899999999999999999 66777766666666666666888888899999999999
Q ss_pred ccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeeeecc
Q 011369 439 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQVC 486 (487)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l~~~ 486 (487)
...+..+.++.+.+|.+.|++.+++.+ ...-.|.++|-+.++.+.++
T Consensus 137 s~~~ia~s~IaD~f~~~~Rs~~~~ify-~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 137 SYSPIAPSLIADSFPDDKRSRVLGIFY-FAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred hhcccchhHhhhcCcchhhhHHHHHhh-hhcccccceeEEeeeeeccC
Confidence 999999999999999999999999984 45555777777776666554
No 250
>PTZ00207 hypothetical protein; Provisional
Probab=98.05 E-value=2e-05 Score=77.98 Aligned_cols=150 Identities=5% Similarity=-0.127 Sum_probs=109.3
Q ss_pred Ccccccc-ccCc-cccch-hhhHHHHHHHHHHHHHHHhhhhcCCC--------eE-ehhHHHHHHHHHHHhhcchhHHHH
Q 011369 106 SGIQGDF-KLNN-FQDGV-LSSAFMVGLLVASPIFASLAKSHNPF--------RL-IGVGLSVWTFATAGCGSSFDFWSI 173 (487)
Q Consensus 106 ~~i~~~~-~~s~-~~~~~-~~s~~~~~~~i~~~~~g~l~dr~Grr--------~~-l~~~~~~~~~~~~~~~~a~~~~~l 173 (487)
.+|.+.+ |.+. .+.+. +.+++.++..+|-+..|.+....-+| ++ +.+..+ ..++.++.+++-.-..+
T Consensus 377 ~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L 455 (591)
T PTZ00207 377 RFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAAL 455 (591)
T ss_pred HHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHh
Confidence 6677888 6523 32233 78999999999999999887222222 22 222223 45555555555433689
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhH-HHHHHhhcccc----------c---hHHHH
Q 011369 174 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG-YVYGGVVGSHL----------N---WRYAF 239 (487)
Q Consensus 174 ~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g-~~~~~~l~~~~----------~---wr~~f 239 (487)
++.-++.|++.|..++.....++|.|. |+-|+-..+...+..+|..+- ..+.|.++++. | .|.+|
T Consensus 456 ~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~ 534 (591)
T PTZ00207 456 PLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPL 534 (591)
T ss_pred HHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHH
Confidence 999999999999999999999999999 899999999999999998775 55667666431 2 78899
Q ss_pred HHHHHHHHHHHHHHhhcc
Q 011369 240 WGEAILMLPFAVLAFVIK 257 (487)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~ 257 (487)
++.+.+++...+....+.
T Consensus 535 ~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 535 AFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHHHHHHHHHHhhee
Confidence 999988888777665554
No 251
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.04 E-value=4e-05 Score=75.77 Aligned_cols=151 Identities=14% Similarity=0.095 Sum_probs=119.0
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHHHHHHHHHhhcchh---------------
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD--------------- 169 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a~~--------------- 169 (487)
..+.++++.+.....-..+.+.-...+..+.++.++|-| ||-+++.++.++..++.++..++..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 456777888877777778888888888999999999986 8999999999998888655433211
Q ss_pred ----------HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCC---C-C--chhHHHHHHHhhhhhhhhhHHHHHHhhcccc
Q 011369 170 ----------FWSIAICRMLVGVGEASFISLAAPFIDDNAP---V-P--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL 233 (487)
Q Consensus 170 ----------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~---~-~--~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~ 233 (487)
...++.+.-+..+|.|+.-+...+.-+|-++ + + ++...+.++....++|..++..+-.+.-+..
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~ 221 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV 221 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 2356777788888999999999999999998 2 2 2337788889999999999888888887889
Q ss_pred chHHHHHHHHHHHHHHHHHHhhc
Q 011369 234 NWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 234 ~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+|.+-|.+..+..++..++.+..
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred cceeeccHHHHHHHHHHHHHHcC
Confidence 99999999988766655544433
No 252
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.03 E-value=1.6e-06 Score=87.83 Aligned_cols=124 Identities=10% Similarity=-0.006 Sum_probs=95.3
Q ss_pred eeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH-------------
Q 011369 356 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 421 (487)
Q Consensus 356 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 421 (487)
-+++.++++..+. .+.+...++..++.++.+++.||.+|| +++.++.++.+++.++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 3455688887666 666777899999999999999999998 667666666666665554331
Q ss_pred --------------------------------------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHH
Q 011369 422 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 463 (487)
Q Consensus 422 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~ 463 (487)
....+++.-++.|++.+..++....++.+.+|++.|+...|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 122345667778888888888889999999999999999999
Q ss_pred HHHHHHhhcCCCccceeeeeec
Q 011369 464 STVSIHIFGDVPSSPLVGVLQV 485 (487)
Q Consensus 464 ~~~~~~~~g~~~~p~~~g~l~~ 485 (487)
. .....+|.++|+.++|++.+
T Consensus 213 ~-~~~~~iG~~lG~llgg~l~~ 233 (633)
T TIGR00805 213 L-ESIAVFGPAFGYLLGSFCLQ 233 (633)
T ss_pred H-HHHHHhhhHHHHHHHHHHHh
Confidence 6 67778888899988887654
No 253
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.91 E-value=4.6e-06 Score=77.24 Aligned_cols=127 Identities=11% Similarity=-0.016 Sum_probs=96.8
Q ss_pred HHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchh-H---HHHHHHHHHhhh-hhhhhhhhhhhhhhhcCCCCchhHH
Q 011369 133 ASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-F---WSIAICRMLVGV-GEASFISLAAPFIDDNAPVPQKTAW 207 (487)
Q Consensus 133 ~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~-~---~~l~~~r~l~G~-g~g~~~~~~~~~i~~~~~~~~r~~~ 207 (487)
+-.+...+.|++|||++.+.|.+++++..+..+...| . ..+++.-.+..+ +.-+-......+-+|.+|.+-|+..
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~ 443 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTC 443 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhh
Confidence 5556677899999999999999999999999988876 1 112222222222 2222344566777999999999999
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhcc-----ccchHHHHHHHHHHHHHHHHHHhhccccc
Q 011369 208 LSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQ 260 (487)
Q Consensus 208 ~~~~~~~~~~G~~~g~~~~~~l~~-----~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 260 (487)
-|+.....-.|+++|...-..+.+ ..+.|++|++.+.+.++..+..+++ ||+
T Consensus 444 hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~-pEt 500 (538)
T KOG0252|consen 444 HGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI-PET 500 (538)
T ss_pred hhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe-ecc
Confidence 999999999999999988888887 6789999999999877666555544 564
No 254
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.88 E-value=0.00013 Score=70.25 Aligned_cols=123 Identities=11% Similarity=0.039 Sum_probs=110.4
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHH-HhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhh
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFA-SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 185 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g 185 (487)
.+...++.++.+.+...+...+...+++++.. .+...+|-|+++..|++.-.+...+.+++++.|+++....+.++..
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~- 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG- 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-
Confidence 47778999999999999888888888888888 7777889999999999999999999999999999999999887754
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 230 (487)
...|...+.++.+..++++|+++++.+..-++..+++|.+-+.+.
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 488999999999999999999999999999999999998876654
No 255
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.87 E-value=4.9e-05 Score=68.90 Aligned_cols=124 Identities=16% Similarity=0.119 Sum_probs=113.0
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC--CCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 186 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~ 186 (487)
.+.||.++.|.|-+.+...++..+.+....+..||.. -+-.+..++.+..-..++.+.++....++++-.+-.+..+.
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~ 368 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTAS 368 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999987 77777888888777788888899999999999999999999
Q ss_pred hhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc
Q 011369 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 232 (487)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~ 232 (487)
..+....++....|.++||.++|+..+..+++-.+||+++|.+..+
T Consensus 369 ~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 369 VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 9999999999999999999999999999999999999999887753
No 256
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.82 E-value=0.0007 Score=65.65 Aligned_cols=244 Identities=14% Similarity=0.092 Sum_probs=134.2
Q ss_pred CccccchhhhHHHH-HHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc---------h----------------
Q 011369 115 NNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------F---------------- 168 (487)
Q Consensus 115 s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------~---------------- 168 (487)
.++.+.++=....+ ...+......+++++++|.+++-+.+..+.....++++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34455555554444 445668889999999999998877776666655555542 1
Q ss_pred ------hHHHHHHHHHHhhhhhhhhhh-hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcc---------c
Q 011369 169 ------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------H 232 (487)
Q Consensus 169 ------~~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---------~ 232 (487)
+.|.+.+.-+..-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+...+.+ .
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~ 215 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGV 215 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Confidence 122222233333333333333 457788999999999999999999999999999888877776 2
Q ss_pred cchHHHHHHHHHHHHHHHH---HHhhccccccCCCCCC-CcccchhhcccccCcccCCCcccccccchhhhhhhhhcccc
Q 011369 233 LNWRYAFWGEAILMLPFAV---LAFVIKPLQLKGFAPA-ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIG 308 (487)
Q Consensus 233 ~~wr~~f~~~~~~~~~~~~---~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (487)
..|...+.......++..+ .......+.....+.. ++.++..
T Consensus 216 ~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~k---------------------------------- 261 (491)
T PF03219_consen 216 DAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKK---------------------------------- 261 (491)
T ss_pred ccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhccc----------------------------------
Confidence 2465443322211111111 1122222111000000 0000000
Q ss_pred ccchhhhhhhhhHHHHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeecccccccce-e---eeceeecccchhhhh
Q 011369 309 ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M---FGGVTIVCGIVGTIS 384 (487)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~ 384 (487)
..+...+..+.++.++++|.+..+++....++.....+....-...++.+..+..-. . +....++..++..++
T Consensus 262 ---k~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l 338 (491)
T PF03219_consen 262 ---KKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFL 338 (491)
T ss_pred ---ccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001222344677888899999988888777776655444333333333332221111 1 112334444555577
Q ss_pred hhhhHhhhccc
Q 011369 385 GGFILDQMGAT 395 (487)
Q Consensus 385 ~g~l~d~~~~~ 395 (487)
++.+.+|+|-+
T Consensus 339 ~~~iir~~GW~ 349 (491)
T PF03219_consen 339 SSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHhhHH
Confidence 78888888876
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.75 E-value=0.00033 Score=67.40 Aligned_cols=57 Identities=14% Similarity=0.024 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccc
Q 011369 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 478 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~ 478 (487)
.+.+..++.+++.++..|-.....+.+..+.+++++|..+..+. ...-.+|-.+|..
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~-~~~l~~Gl~~Gs~ 426 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALM-VIFLLVGLALGAV 426 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 35566677788888887766666777788888888887777775 4444445444443
No 258
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.74 E-value=8.5e-05 Score=70.69 Aligned_cols=108 Identities=19% Similarity=0.207 Sum_probs=86.9
Q ss_pred eEehhHHHHHHHHHHHhhcc---hh------HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCC---chhHHHHHHHhhh
Q 011369 148 RLIGVGLSVWTFATAGCGSS---FD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 215 (487)
Q Consensus 148 ~~l~~~~~~~~~~~~~~~~a---~~------~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 215 (487)
|+++++.+++.+|.++..++ .+ .+.++++-.+.++|.|+.-|...++++|.++++ +|...+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 34567888888888874433 22 367899999999999999999999999999875 4778888999999
Q ss_pred hhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhh
Q 011369 216 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 216 ~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 255 (487)
++|..++..+.+++-+++||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999998876665554443
No 259
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.67 E-value=0.0001 Score=68.79 Aligned_cols=114 Identities=12% Similarity=0.062 Sum_probs=82.8
Q ss_pred cccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHH--HHHHH---HHHhhcchhHHHHHHHHHHhhhhhhh
Q 011369 112 FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS--VWTFA---TAGCGSSFDFWSIAICRMLVGVGEAS 186 (487)
Q Consensus 112 ~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~--~~~~~---~~~~~~a~~~~~l~~~r~l~G~g~g~ 186 (487)
+.-..++..+....|.+|..++.--...+ |+ |++.+.+.+ +..+. ..+.-+.++.|.+++.-+..|+..|.
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa 351 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGA 351 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhH
Confidence 33345677788888888776654432221 33 333333322 22222 22333568999999999999999999
Q ss_pred hhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhh
Q 011369 187 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (487)
Q Consensus 187 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 229 (487)
.++.....+.|-.++++|-.+++....+-++|.+++.+++-.+
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887554
No 260
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.00013 Score=70.94 Aligned_cols=139 Identities=14% Similarity=0.059 Sum_probs=92.3
Q ss_pred Cccccc-cccCccccchhhhHHHHHHHHHHHHHHHhhhh----cCCCeEehhHHHHHHHHH-HHhhcchhHHHHHHHHHH
Q 011369 106 SGIQGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFRLIGVGLSVWTFAT-AGCGSSFDFWSIAICRML 179 (487)
Q Consensus 106 ~~i~~~-~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr----~Grr~~l~~~~~~~~~~~-~~~~~a~~~~~l~~~r~l 179 (487)
|.+.++ .|.|..+.+.+.+.+.++.+++.+..|.++|| ..+|......+.++.+.. +......+......+-+.
T Consensus 297 pl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~ 376 (495)
T KOG2533|consen 297 PLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLI 376 (495)
T ss_pred HHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHh
Confidence 555555 56899999999999999999999999999999 677777666665554444 444444445555555555
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCch-hHHHHHHHhhhhhhhh-hHHHHHHhhccccchHHHHHHHHH
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQK-TAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAI 244 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r-~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~~wr~~f~~~~~ 244 (487)
.+.+.....+......++...++.| -...+....+.+.+.. .+++.-+...+.++|-+.|.....
T Consensus 377 ~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~~ 443 (495)
T KOG2533|consen 377 GPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLVA 443 (495)
T ss_pred cchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHHH
Confidence 5555666677777888887765443 3344444444444443 344444555666889988844433
No 261
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.65 E-value=3e-05 Score=54.16 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=46.3
Q ss_pred CccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHH
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 157 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~ 157 (487)
|...++.|+++.++|.+.++..+...++.+++|.++||+++++.++....+.
T Consensus 24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 6667789999999999999999999999999999999999998877665543
No 262
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.00039 Score=69.56 Aligned_cols=138 Identities=12% Similarity=-0.064 Sum_probs=103.0
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHH---HHHHHHHhhhhhhhhhhhhhhhhhhcCCC
Q 011369 125 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS---IAICRMLVGVGEASFISLAAPFIDDNAPV 201 (487)
Q Consensus 125 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~---l~~~r~l~G~g~g~~~~~~~~~i~~~~~~ 201 (487)
.............+.+.|++|||.....+.++..++.++.++..+... ..+...+..++.+..+.....+..|.+|.
T Consensus 358 ~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt 437 (521)
T KOG0255|consen 358 LSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPT 437 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH
Confidence 333344555555688999999999999999999999999998875443 56666666666776777779999999999
Q ss_pred CchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCC
Q 011369 202 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 263 (487)
Q Consensus 202 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 263 (487)
..|..+.+.......+|.+++|.+...... ......+.+.+....+.+.+..++.||+...
T Consensus 438 ~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 438 VVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 999999999999999999999988765544 2222222334556666666666777885443
No 263
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.27 E-value=0.00081 Score=59.17 Aligned_cols=135 Identities=10% Similarity=-0.093 Sum_probs=89.6
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcC
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 199 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~ 199 (487)
|.+.-+-.+...+..+....+.||+---.=..+..++.+.+.++-+++++.++=+++-.+..++.|.-...-..+-+.+
T Consensus 65 g~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~Y- 143 (409)
T KOG3880|consen 65 GAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSRY- 143 (409)
T ss_pred chhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhccC-
Confidence 3444444455556666666778886443334566777888889999999999999998888888886655544444433
Q ss_pred CCCchhHHHHHHHhhhhhhhhhHHHHHHhhccc--cchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 200 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 200 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~--~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
++ ...+.+..+.+.++++|..--..+.+. ..-|...+++..+.++.+...++.+++
T Consensus 144 ~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 144 PS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 32 235556666666666666544445542 456888888888777777777777654
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.25 E-value=0.013 Score=55.65 Aligned_cols=126 Identities=10% Similarity=0.089 Sum_probs=88.9
Q ss_pred CccccccccC---ccccchhhhHHHH-HHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc---------hh---
Q 011369 106 SGIQGDFKLN---NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------FD--- 169 (487)
Q Consensus 106 ~~i~~~~~~s---~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---------~~--- 169 (487)
..+++.+.++ +..+.++=+...+ +..+..++.+++.+++.|.+++-+-+..+....+++++. ++
T Consensus 47 R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 47 RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 4466666554 5566777777777 677899999999999999999888877777777777652 11
Q ss_pred --------------------HHHHHHHHHHhhhhhhhhhh-hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh
Q 011369 170 --------------------FWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (487)
Q Consensus 170 --------------------~~~l~~~r~l~G~g~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 228 (487)
.|...+.-++.=+=.+.... .-.....|.+..+|-.|..++++.+.+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222222222222222 345667888888999999999999999999999888888
Q ss_pred hcc
Q 011369 229 VGS 231 (487)
Q Consensus 229 l~~ 231 (487)
+.+
T Consensus 207 ~~k 209 (509)
T COG3202 207 LSK 209 (509)
T ss_pred Hhh
Confidence 876
No 265
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.13 E-value=0.0035 Score=59.58 Aligned_cols=142 Identities=16% Similarity=0.221 Sum_probs=107.9
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhhhcCCC---eE----ehhHHHHHHHHHHHhhcc----------hhHHHHHHHHHHh
Q 011369 118 QDGVLSSAFMVGLLVASPIFASLAKSHNPF---RL----IGVGLSVWTFATAGCGSS----------FDFWSIAICRMLV 180 (487)
Q Consensus 118 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr---~~----l~~~~~~~~~~~~~~~~a----------~~~~~l~~~r~l~ 180 (487)
..+|..+...+...+.+++..++-.+.++| +. +-+|+.+.+.+.++.... .+.++++..-+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 447778888888888888888888885544 21 345555555555544332 3689999999999
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh------hccccchHHHHHHHHHHHHHHHHHHh
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~~wr~~f~~~~~~~~~~~~~~~ 254 (487)
++|.=+..|++.+++....|+.-.+.+++.+......|..++..+++. ..+...-...|+..+...++..+...
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999889999999998888888888777763 23344566778888888777777666
Q ss_pred hcccc
Q 011369 255 VIKPL 259 (487)
Q Consensus 255 ~~~p~ 259 (487)
...|+
T Consensus 485 ~~~~~ 489 (498)
T COG3104 485 LLSPK 489 (498)
T ss_pred HhhHH
Confidence 65554
No 266
>PRK03612 spermidine synthase; Provisional
Probab=97.09 E-value=0.006 Score=60.30 Aligned_cols=136 Identities=10% Similarity=-0.072 Sum_probs=81.8
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHH--HH-HHHHHh----hcchhH-HHHHHHHHH
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV--WT-FATAGC----GSSFDF-WSIAICRML 179 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~--~~-~~~~~~----~~a~~~-~~l~~~r~l 179 (487)
+.--+|.+..+.+.+.+++.+|.++|+..++++.++.-++ ...+-+.+ .+ +...+. ++...+ ..++..-++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444677888889999999999999999999887432222 21111111 11 111111 111111 223444556
Q ss_pred hhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc-cccchHHHHHHHHHH
Q 011369 180 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAIL 245 (487)
Q Consensus 180 ~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~~wr~~f~~~~~~ 245 (487)
.|+..|+..|....+..+... ++-+...|-.+....+|.++|.++.+++. +..|-....++.+.+
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l 185 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSL 185 (521)
T ss_pred HHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 788888888877776665432 24567788889999999999999887654 455543333333333
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.05 E-value=0.014 Score=54.41 Aligned_cols=58 Identities=19% Similarity=0.026 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccc
Q 011369 420 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 478 (487)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~ 478 (487)
..+.++.+....+.++..|-.....+.+.++.++++++..+-.+. ...-..|-..|..
T Consensus 340 ~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m-~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 340 FESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLM-VFFLVGGLALGSL 397 (406)
T ss_pred ecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHH-HHHHHHHHHHhhH
Confidence 456677788888888888777777788888998887776666664 4444445444433
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.68 E-value=0.018 Score=49.97 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=34.7
Q ss_pred CchhHHHHHHHhhhhhhhhhHHHHHHhh---c--cccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 202 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 202 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~--~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
|+|+....+-..+.++|.++.-..--.- . -.-.|++++.+.+++.++.+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5666666666777788877654331111 0 11359999999998877666655555
No 269
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.68 E-value=0.0043 Score=60.13 Aligned_cols=145 Identities=13% Similarity=0.020 Sum_probs=105.6
Q ss_pred cCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhc----------chhHHHHHHHHHHhhhh
Q 011369 114 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRMLVGVG 183 (487)
Q Consensus 114 ~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------a~~~~~l~~~r~l~G~g 183 (487)
.++...|.+..+..++..++.....+..-+..-|+++....++.++..+.-.. .++.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888888888888888889888888877888888888888777666554221 12233344455667777
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc--------hHHHHHHHHHHHHHHHHHHhh
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLPFAVLAFV 255 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--------wr~~f~~~~~~~~~~~~~~~~ 255 (487)
....+-....+++|..|+..-|...+++.+..++|..++..++..+.+.++ -.+..++..+..++..++..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 777777888999999999999999999999999999999999988876544 224455555555444444444
Q ss_pred ccc
Q 011369 256 IKP 258 (487)
Q Consensus 256 ~~p 258 (487)
++|
T Consensus 412 Lp~ 414 (433)
T PF03092_consen 412 LPP 414 (433)
T ss_pred cCC
Confidence 433
No 270
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.59 E-value=0.00098 Score=46.54 Aligned_cols=60 Identities=15% Similarity=0.206 Sum_probs=48.9
Q ss_pred HHHHHHHHhhheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccc
Q 011369 336 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI 396 (487)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 396 (487)
-..+++...+...+..|+|.|+++ .|.+..+. .+.++..+..+++.++.|+++||.++++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 345566667777788899999997 67887777 6667777889999999999999999983
No 271
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.29 E-value=0.13 Score=49.88 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=53.8
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh
Q 011369 168 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (487)
Q Consensus 168 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 228 (487)
++-+..++..++.|+..|-....+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667778889999999999999999999999999999999999999999999888877543
No 272
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.20 E-value=0.0012 Score=57.95 Aligned_cols=120 Identities=13% Similarity=0.172 Sum_probs=73.4
Q ss_pred hheeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH--
Q 011369 345 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-- 421 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 421 (487)
..+.+..|.| .+++..+++..+. .+.....++..+| +..|.+.|+++.+ ..+.++.+....+....+..-
T Consensus 17 t~Y~Fs~yS~-~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~~ 89 (250)
T PF06813_consen 17 TTYTFSAYSP-QLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVSG 89 (250)
T ss_pred cccchhhhhH-HHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHhC
Confidence 3445555555 4556688887776 5555556777665 7889999999998 777777777777776665431
Q ss_pred -----HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhc
Q 011369 422 -----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 472 (487)
Q Consensus 422 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g 472 (487)
+.|......++.+.+.+...........+.+ |++||++.|+.....+.-+
T Consensus 90 ~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GLSa 144 (250)
T PF06813_consen 90 RIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGLSA 144 (250)
T ss_pred ccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHhHH
Confidence 2333333334443333333233333344566 4689999999744444433
No 273
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.16 E-value=0.15 Score=48.97 Aligned_cols=105 Identities=14% Similarity=0.213 Sum_probs=78.8
Q ss_pred hhhHHHHHHHH----HHHHHHHhh---hhcCCCeEehhHHHHHHHHHHHhhcc------------------hhHHHHHHH
Q 011369 122 LSSAFMVGLLV----ASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAIC 176 (487)
Q Consensus 122 ~~s~~~~~~~i----~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~a------------------~~~~~l~~~ 176 (487)
+..++.++..+ ++.+.+.+. +++||++.+.++..+..++.++.-.. +++...++.
T Consensus 280 ~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 280 LIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHH
Confidence 34444444444 444555555 45899999999999888887775442 256677888
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHH
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 227 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 227 (487)
-+++|++.+......+.++.+.+ +++|..+.++.-.-..++..++-....
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 89999999999999999999999 478999999988888887776555443
No 274
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.10 E-value=0.01 Score=55.73 Aligned_cols=150 Identities=10% Similarity=-0.060 Sum_probs=95.6
Q ss_pred cccccCccccchhhhHHHHHHHHHHHHHHHhhhhcC-CCeEehhHHHHHHHHHHHhh-c---chhHHHHHHHHHHhhhhh
Q 011369 110 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCG-S---SFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 110 ~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~-~---a~~~~~l~~~r~l~G~g~ 184 (487)
..-|.+....|++.....++..+++...|.+.||.. -|.+.++......++..... + ....+.++....+.|++.
T Consensus 294 ~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~ 373 (480)
T KOG2563|consen 294 CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFG 373 (480)
T ss_pred ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhh
Confidence 344556678899999999999999999999999985 35555555555555532211 1 123455677778888888
Q ss_pred hhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc---hHH-HHHHHHHHHHHHHHHHhhcccc
Q 011369 185 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRY-AFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~---wr~-~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
....|...-+-.|..-|..-+.-.|+.....++=.++-..+-+.+.+..+ |.+ .-+......++..++..++.|+
T Consensus 374 ~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 374 TGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred cCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 88999999998888655555555666665555544444455555555444 333 3333333334444555555444
No 275
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.88 E-value=0.028 Score=53.86 Aligned_cols=120 Identities=16% Similarity=-0.005 Sum_probs=91.2
Q ss_pred ccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhh------cch----hHHHHHHHHHHh
Q 011369 111 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG------SSF----DFWSIAICRMLV 180 (487)
Q Consensus 111 ~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~a~----~~~~l~~~r~l~ 180 (487)
.-|+++..+|..-+...+....+.....++.+|+|..|.-+.+......+..++. -.+ +...++.+-++.
T Consensus 287 ~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~S 366 (432)
T PF06963_consen 287 SQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALS 366 (432)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHH
Confidence 3499999999999999999999999999999999999888887765444333332 222 344445555555
Q ss_pred hhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc
Q 011369 181 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 181 G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 230 (487)
=+|-=.+--...-++.|..|+++||...|.-.+..++-.++-..++-.+.
T Consensus 367 R~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 367 RIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 55555566778889999999999999999999988888777776655444
No 276
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.81 E-value=0.0016 Score=60.05 Aligned_cols=58 Identities=21% Similarity=0.065 Sum_probs=3.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccce
Q 011369 421 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 479 (487)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~ 479 (487)
.+.+..++.++++++..|-.....+.+.++.+++++|..+..+. ...-..|-.+|..+
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~-~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVM-SFFLSFGLFIGSVL 303 (309)
T ss_dssp ---------------------HHHH----------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 45566777788888888777777788888999888887777765 44455566666555
No 277
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=95.44 E-value=0.042 Score=52.89 Aligned_cols=83 Identities=11% Similarity=0.030 Sum_probs=65.6
Q ss_pred HHHHHHH-HHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHH
Q 011369 171 WSIAICR-MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (487)
Q Consensus 171 ~~l~~~r-~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 249 (487)
+.+++.. ++.|.+.-.......++-+|...+++++.+.++++.....+..+||++........|.|+...+.+...++.
T Consensus 388 ~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~ 467 (488)
T KOG2325|consen 388 ILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVV 467 (488)
T ss_pred hhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHH
Confidence 3444443 456777776777788899999999999999999999999999999999998888888888877776665544
Q ss_pred HHHH
Q 011369 250 AVLA 253 (487)
Q Consensus 250 ~~~~ 253 (487)
..+.
T Consensus 468 ~~l~ 471 (488)
T KOG2325|consen 468 AALW 471 (488)
T ss_pred HHHH
Confidence 4333
No 278
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.91 E-value=0.0071 Score=60.07 Aligned_cols=127 Identities=12% Similarity=0.057 Sum_probs=0.0
Q ss_pred CccccccccCccccchhhhHHHH-HHHHHHHHHHHhhhhcC--CCeEehhHHHHHHHHHHHhh---c-------------
Q 011369 106 SGIQGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCG---S------------- 166 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~~s~~~~-~~~i~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~---~------------- 166 (487)
-.++.+|++++++.+++.++..+ +.++|.+++|.+..|+. .|..+....+...+..+... +
T Consensus 330 KylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~ 409 (539)
T PF03137_consen 330 KYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTV 409 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecC
Confidence 45778899999999999876666 66789999999999985 45554444444433333200 0
Q ss_pred --------------------------------------chhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHH
Q 011369 167 --------------------------------------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 208 (487)
Q Consensus 167 --------------------------------------a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~ 208 (487)
.+++..+++..++.-+..+...+.....+-+.+|+++|..++
T Consensus 410 ~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~Al 489 (539)
T PF03137_consen 410 PYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFAL 489 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhh
Confidence 011333445555555555555566666777889999999999
Q ss_pred HHHHhhhh-hhhhhHHHHHHhhccc
Q 011369 209 SMFYMCIP-TGVALGYVYGGVVGSH 232 (487)
Q Consensus 209 ~~~~~~~~-~G~~~g~~~~~~l~~~ 232 (487)
|+...... +|.+-||++-|.++|.
T Consensus 490 Gv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 490 GVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------
T ss_pred hHHHHHHHhhcCcchHHHHhHHHhh
Confidence 99976655 5778899998888874
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=94.04 E-value=0.22 Score=47.19 Aligned_cols=133 Identities=11% Similarity=0.029 Sum_probs=95.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhc
Q 011369 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 198 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~ 198 (487)
-.|-..++.+...+.+....++.+|+|-|+.+..+...+.++..+.+..++.+....-|-..|+-.+.....-...++++
T Consensus 334 G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 334 GCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 35556788888999999999999999988888888888899999999999999999999988866665555544444443
Q ss_pred CCC-----------------------CchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-hHHHHHHHHHHHHHHHH
Q 011369 199 APV-----------------------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAV 251 (487)
Q Consensus 199 ~~~-----------------------~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~ 251 (487)
.-. ..+|...|+.+....+-+++..+..|.+.+.+| =+.+-...+++++....
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~ 490 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGG 490 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHH
Confidence 211 134677777888888888777766666665543 34444444444444433
No 280
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=93.51 E-value=0.022 Score=57.87 Aligned_cols=133 Identities=11% Similarity=-0.064 Sum_probs=80.6
Q ss_pred heeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhh-cccchhhhHHHHHHHHHHHHHHHHHHHHH--
Q 011369 346 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAATFLGAISCLTAFCLS-- 421 (487)
Q Consensus 346 ~~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 421 (487)
++++...+..|+.+..+++...+ .+.........+..+++|+++|++ |++ +.+.++.++..++..++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence 34444555556666566665444 333334444556778899999975 555 566666666665555443321
Q ss_pred ------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCC---chhHHHHHHHHHHHhhcCCCccceeeeee
Q 011369 422 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQ 484 (487)
Q Consensus 422 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~r~~~~g~~~~~~~~~g~~~~p~~~g~l~ 484 (487)
.....+..+.+..++.++.-++..+...+.++++ .+.....++... ..+|+.+++.+.+++.
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~-iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFA-INAGSLISTIITPILR 148 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 1123455667777888888888888888888653 355666665333 3346666766666554
No 281
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.47 E-value=0.043 Score=44.34 Aligned_cols=100 Identities=6% Similarity=-0.114 Sum_probs=72.0
Q ss_pred ceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEee
Q 011369 372 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 451 (487)
Q Consensus 372 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (487)
++......++.++.+.+.+++|.| +.++++.+...+..... ...+.+.++....+.|++.+..|...-.++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 444556677888889999999998 67777666665444443 345567777888889999999888887777777
Q ss_pred cCCCchhHHHHHHHHHHHhhcCCCccc
Q 011369 452 VKPSLRALSMAISTVSIHIFGDVPSSP 478 (487)
Q Consensus 452 ~~~~~r~~~~g~~~~~~~~~g~~~~p~ 478 (487)
..++.+++..++.+.. ...+.++|..
T Consensus 118 s~~~~~~~~~~ifw~i-~~~s~i~G~~ 143 (156)
T PF05978_consen 118 STEETIGRNTGIFWAI-FQSSLIFGNL 143 (156)
T ss_pred CCHHHHhhHHHHHHHH-HHHHHHHHHH
Confidence 7778999999987444 3345555543
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=93.01 E-value=0.16 Score=47.96 Aligned_cols=99 Identities=10% Similarity=0.003 Sum_probs=74.8
Q ss_pred CccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeE--ehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhh
Q 011369 115 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL--IGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 192 (487)
Q Consensus 115 s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~--l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~ 192 (487)
+...-|.+-++..+..+++.+..|.+..++.+-.- +.+..++.+...++++..+|+|..+++-++.+...-...+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455888889999999999999999777766433 3333455566667788889999999999998888888888888
Q ss_pred hhhhhcCCCCchhHHHHHHHh
Q 011369 193 PFIDDNAPVPQKTAWLSMFYM 213 (487)
Q Consensus 193 ~~i~~~~~~~~r~~~~~~~~~ 213 (487)
.-++....+++-+..+|+...
T Consensus 363 ~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHhccccceeeeeeeHHH
Confidence 888877777777766665543
No 283
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.32 E-value=0.42 Score=43.18 Aligned_cols=75 Identities=7% Similarity=0.123 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCC
Q 011369 125 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 200 (487)
Q Consensus 125 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 200 (487)
...+..+...++.+.+..++|-|++++++...+...- ..=+=+.+..++-+-.+.|+|.+..+..--+|+++.-.
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3445556666677789999999999998888775432 23334678899999999999999999888888777654
No 284
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=92.31 E-value=0.021 Score=52.28 Aligned_cols=98 Identities=14% Similarity=0.083 Sum_probs=59.8
Q ss_pred cccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011369 360 IYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVF 438 (487)
Q Consensus 360 ~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (487)
.+|++..+. .+.....+...+...+.|.+.||+||| +..+...++..+.++. -..++.+.+++.=++.|+...
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATS 136 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHH
Confidence 477776565 333444566677778889999999999 6777766666666653 334556666666666666666
Q ss_pred ccCCCeeEEEE-----eecCCCchhHHHHH
Q 011369 439 ATQAPVNYVCL-----HSVKPSLRALSMAI 463 (487)
Q Consensus 439 ~~~~~~~~~~~-----~~~~~~~r~~~~g~ 463 (487)
..+...-++.. +.+|++..+...+.
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~ 166 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSL 166 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 55554433332 23444444444443
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.96 E-value=2 Score=37.85 Aligned_cols=135 Identities=15% Similarity=0.055 Sum_probs=84.4
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhcCCCe--EehhHHHHHHHHHHHh----hcch---hHHHHHHHHHHhhhhhhhhhh
Q 011369 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGC----GSSF---DFWSIAICRMLVGVGEASFIS 189 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~----~~a~---~~~~l~~~r~l~G~g~g~~~~ 189 (487)
.|.+.+.+++...+|+-+..++..|-..|- .+.+..++.+....+. ..+| +...=+++-++.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 488999999999999999988888765542 3333333333322222 2222 122224555555677888999
Q ss_pred hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
....+=+++.|++.|...+.++..-.++=..++-..--.-....+=|..|-++.+...+..+..
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 9999999999999999999888766554333322110000011345788888887766654443
No 286
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=91.87 E-value=0.052 Score=50.05 Aligned_cols=107 Identities=15% Similarity=0.081 Sum_probs=3.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhhh-cCCCeEehhHH--HHHHHHHHHhh----------cchhHHHHHHHHHHhhhhhhhhh
Q 011369 122 LSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGL--SVWTFATAGCG----------SSFDFWSIAICRMLVGVGEASFI 188 (487)
Q Consensus 122 ~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~~----------~a~~~~~l~~~r~l~G~g~g~~~ 188 (487)
....|.++-.+|....++.-=+ -.+|++.+.+. +++....++|. .-+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 3456777878888777654211 13444443321 22322233331 23456777888999999999999
Q ss_pred hhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh
Q 011369 189 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (487)
Q Consensus 189 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 228 (487)
+....+..+..++++|..+-.+......+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888888888876543
No 287
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.69 E-value=0.071 Score=37.70 Aligned_cols=72 Identities=17% Similarity=0.149 Sum_probs=48.1
Q ss_pred eeeeecccceeeecccccccce-eeeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011369 347 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 424 (487)
Q Consensus 347 ~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (487)
+.+...+|...++ .+++..+. .+.+...++..+|.+...++.++.+++ +.+..+.+...+..+.....++.+
T Consensus 9 FayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 9 FAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred HHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhchH
Confidence 3444566766655 67776666 666777788888888888777775544 566666666666666666555544
No 288
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=89.21 E-value=0.05 Score=49.77 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=63.3
Q ss_pred eeceeecccchhhhhhhhhHhhhcccchhhhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCeeEE
Q 011369 370 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYV 447 (487)
Q Consensus 370 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (487)
......+...++.+..|.+.||.||| +.+...........+...... ..+..++.....+++.+...+....+
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 118 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASAL 118 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 33445566666779999999999887 344443332222222222222 24444444444566666666666777
Q ss_pred EEeecCC-CchhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 448 CLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 448 ~~~~~~~-~~r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
..+..++ +.|+...+.........|..++|.+.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T COG0477 119 LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLL 155 (338)
T ss_pred HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766 57888888763334555666666554443
No 289
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=87.99 E-value=2.5 Score=39.17 Aligned_cols=122 Identities=16% Similarity=0.045 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH------HHhhcc------hhHHHHHHHHHHhhhhhhh--hhhhhh
Q 011369 127 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT------AGCGSS------FDFWSIAICRMLVGVGEAS--FISLAA 192 (487)
Q Consensus 127 ~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~------~~~~~a------~~~~~l~~~r~l~G~g~g~--~~~~~~ 192 (487)
.....+..++.|...|+..|+|++...+.+.=+.. ++..+. .++..+..+-++.-.-.+. ....+.
T Consensus 73 sgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~ 152 (503)
T KOG2601|consen 73 SGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAG 152 (503)
T ss_pred HhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34456677788888999999998877766532222 222222 2455544444333222111 111111
Q ss_pred h--hhhhcC----CCCchhHHH---HHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHH
Q 011369 193 P--FIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 248 (487)
Q Consensus 193 ~--~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 248 (487)
. +-.||. ..+.+.... +.....-..-..+.|.+.|.+....+-|..-.+.++..++
T Consensus 153 ~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 153 TILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred eEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 1 223332 233344333 5555556667789999999999888877765555555554
No 290
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=85.26 E-value=11 Score=36.93 Aligned_cols=74 Identities=14% Similarity=0.073 Sum_probs=58.1
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHH
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 249 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~ 249 (487)
.-++.|+........--..+.+.+| +++|+..+|-++...++..++..++++.+.+.+||+....+.-++.++.
T Consensus 272 ~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 272 LVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3345677777777777788888887 4578999999999888888777878899999999998887776665553
No 291
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.21 E-value=2.5 Score=38.10 Aligned_cols=115 Identities=10% Similarity=0.054 Sum_probs=79.7
Q ss_pred cccccC-ccccchhhhHHHHHHHHHHHHHHHhhhhcCCCe---E---ehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhh
Q 011369 110 GDFKLN-NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR---L---IGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 182 (487)
Q Consensus 110 ~~~~~s-~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~---~---l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~ 182 (487)
+.+..+ +.|.-|....|.+|..+..-- -++=+-+ . +-.-.+++.+...+..+.++++..++.-+..|+
T Consensus 280 ~g~sls~~sqYRwyqvlYQlGVFiSRSS-----~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGL 354 (409)
T KOG3880|consen 280 HGFSLSKDSQYRWYQVLYQLGVFISRSS-----INLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGL 354 (409)
T ss_pred cCCccchhhcchhhheeeeeeEEEEecc-----ceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 444444 345778888888776442211 1111111 1 111223344455566778999999999999999
Q ss_pred hhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhh
Q 011369 183 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (487)
Q Consensus 183 g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 229 (487)
-.|..++...--+.+-.++++|-.+++....+-++|..++.+++-.+
T Consensus 355 lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 355 LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 99999998888888888889999999999999999988887776443
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=83.95 E-value=4.5 Score=38.28 Aligned_cols=106 Identities=19% Similarity=0.121 Sum_probs=74.3
Q ss_pred chhhhH-HHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH--HH-h------hcchhHHHHHHHHHHhhhhhhhhhh
Q 011369 120 GVLSSA-FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AG-C------GSSFDFWSIAICRMLVGVGEASFIS 189 (487)
Q Consensus 120 ~~~~s~-~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~-~------~~a~~~~~l~~~r~l~G~g~g~~~~ 189 (487)
-.+..+ +.+.-.+|.+.+.++-+. +||+. .+..++-.+.- +. | .+-.+-++++..-.+.|+..|-...
T Consensus 285 ~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYlts 362 (406)
T KOG1479|consen 285 LLLVFLSFNVFDLIGSILAALLTWP-DPRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYLTS 362 (406)
T ss_pred HHHHHHHhHHHHHhhhhhhhcccCC-CCcee-hHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchHhh
Confidence 344455 777778886666665443 34443 33433322222 21 1 2345778889999999999999999
Q ss_pred hhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHH
Q 011369 190 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 227 (487)
Q Consensus 190 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~ 227 (487)
..+.+..+-++++++-.+-.+.......|...|..++.
T Consensus 363 l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~ 400 (406)
T KOG1479|consen 363 LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSW 400 (406)
T ss_pred heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999999999999988888888888888888877653
No 293
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=83.25 E-value=16 Score=31.31 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=26.4
Q ss_pred hcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHH
Q 011369 197 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 243 (487)
Q Consensus 197 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~ 243 (487)
|+...+++.+.-.......-++..+|..+++.+.+..+.+ ..++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~ 198 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPA 198 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 3333344433444555556667777778888888777753 334333
No 294
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=81.42 E-value=21 Score=35.20 Aligned_cols=75 Identities=12% Similarity=0.109 Sum_probs=55.7
Q ss_pred HHHhhhhhhhhhhhhhhhhhhcCC-CCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 011369 177 RMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 251 (487)
Q Consensus 177 r~l~G~g~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~ 251 (487)
-+..|+........--..+.+.+| ++++...+|-++...++-.++-..+++.+.+.+||+..-.+.=++.++..+
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 344567777777777777888887 456788888888888777777778889999999999888877555444443
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=81.11 E-value=1.3 Score=41.23 Aligned_cols=143 Identities=12% Similarity=0.065 Sum_probs=73.4
Q ss_pred hhHHHHHHHHHHHHhhheeeeecccceeeecccccccceeeeceeecccchhhhhhhhhHh-----hhcccchhhhHHHH
Q 011369 330 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILD-----QMGATISNAFKLLS 404 (487)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~~~~~ 404 (487)
+.+......+..++....... .+|.+++. .+.|-.+..+...... -.--.++...++| |+|||+. ++.-
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~-P~sLKllWaPiVDs~y~k~~Grrks---Wvvp 104 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYW-PFSLKLLWAPIVDSVYSKRFGRRKS---WVVP 104 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhh-HHHHHHHHHhhhHHHHHHhhccccc---eeee
Confidence 556666677788887766555 78988885 4555333211111111 1223456777888 9999964 2223
Q ss_pred HHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCC
Q 011369 405 AATFLGAISCLTAFCLS----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 474 (487)
Q Consensus 405 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~ 474 (487)
....++..+.++....+ +.......+++..+..+.-=..+-.+..+...++..|-++.. +......|.+
T Consensus 105 ~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~-q~Vg~~~Gyf 183 (510)
T KOG3574|consen 105 CQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTC-QSVGQTAGYF 183 (510)
T ss_pred hHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHH-HHHHHhhhHH
Confidence 33333333333333221 111121223333443332223345566666777777766665 3556666666
Q ss_pred Cccce
Q 011369 475 PSSPL 479 (487)
Q Consensus 475 ~~p~~ 479 (487)
+|-.+
T Consensus 184 L~~~i 188 (510)
T KOG3574|consen 184 LGNVV 188 (510)
T ss_pred hhcce
Confidence 55444
No 296
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=80.14 E-value=5.9 Score=40.63 Aligned_cols=62 Identities=16% Similarity=0.011 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhh-hhhhhHHHHHHhhcc
Q 011369 170 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP-TGVALGYVYGGVVGS 231 (487)
Q Consensus 170 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~G~~~g~~~~~~l~~ 231 (487)
+..+++..++.-+..+...+..+.++-+.+++|+|..++|+...... +|.+-+|++-|+++|
T Consensus 586 ~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 586 FLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred hHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHh
Confidence 34455555555555555667778888899999999999999977765 688889999999885
No 297
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=76.73 E-value=47 Score=31.68 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=17.4
Q ss_pred hHHHHhhhcchhHHHHHHHHHHHHh
Q 011369 320 SQDTKVLLQEKVYVVNVLGYIAYNF 344 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (487)
.+..++.+++|.++...++......
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 4455677888988887777655554
No 298
>PRK03612 spermidine synthase; Provisional
Probab=73.84 E-value=0.47 Score=47.16 Aligned_cols=54 Identities=11% Similarity=0.018 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhccCCCeeEEEEeecCCCchhHHHHHHHHHHHhhcCCCccceeeee
Q 011369 428 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 483 (487)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~g~~~~~~~~~g~~~~p~~~g~l 483 (487)
...++.++..|...|...-+..+.. .+..+...|-. ...+.+|+++|+.+.|.+
T Consensus 115 ~~~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~l-y~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 115 VLVLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATV-LAADYLGALVGGLAFPFL 168 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhh-HhHHhHHHHHHHHHHHHH
Confidence 3344556666766665444333222 11234445553 566777777777766653
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=73.54 E-value=10 Score=35.07 Aligned_cols=132 Identities=14% Similarity=0.052 Sum_probs=89.3
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhcCCCe--EehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhh
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 197 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~ 197 (487)
|-.-.+..+..+++.+..|.+--.+.|.. .+.++.+..+...++++.++++|..+++-++.+.--....+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 55666778888899999999987776653 4455556666667778888999999888888888777788888888888
Q ss_pred cCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccc-----------hHHHHHHHHHHHHHHHHHHh
Q 011369 198 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-----------WRYAFWGEAILMLPFAVLAF 254 (487)
Q Consensus 198 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-----------wr~~f~~~~~~~~~~~~~~~ 254 (487)
....+.-|..+|+.... +.++-.++.-.+.+.-| +-.-|.+.+.+.++.....+
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~ 418 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEY 418 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHH
Confidence 88888888888776543 22333333333333211 22346666666555544333
No 300
>COG4769 Predicted membrane protein [Function unknown]
Probab=72.57 E-value=11 Score=30.18 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhh
Q 011369 125 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 184 (487)
Q Consensus 125 ~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~ 184 (487)
++.+..++.+...-++..++|+|.+-.+|.-.. .++.+|+.++.+++++.|--.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcch
Confidence 455566677777778889999999877666443 567899999999999986543
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.88 E-value=9.6 Score=28.02 Aligned_cols=37 Identities=5% Similarity=-0.109 Sum_probs=24.5
Q ss_pred chhhhHHHHHHHHHHHHHHHhhhhc-CCCeEehhHHHH
Q 011369 120 GVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSV 156 (487)
Q Consensus 120 ~~~~s~~~~~~~i~~~~~g~l~dr~-Grr~~l~~~~~~ 156 (487)
.+-.+.-+++..+.....||+.||| |-++..++..++
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 3344566677777888889999997 555554444333
No 302
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=71.51 E-value=11 Score=36.69 Aligned_cols=64 Identities=6% Similarity=-0.006 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccch
Q 011369 172 SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 172 ~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
.+++.-++.-+..-..+++..+.-+.+..|.-=|+.|.+.++..++|+---..+.-.+++.+.+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~ 470 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTV 470 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccc
Confidence 3455566777777888888999999999999999999999999999865444444444444333
No 303
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=71.23 E-value=16 Score=31.41 Aligned_cols=123 Identities=16% Similarity=0.101 Sum_probs=79.1
Q ss_pred HHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHH
Q 011369 75 MLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGL 154 (487)
Q Consensus 75 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~ 154 (487)
.+..+.|-.++...-. +=.|.+..+.+.+|++..+--=+.+.|.+|..+|.++.+.++--+
T Consensus 106 llLGlkREaIGat~SI---------~REp~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~---------- 166 (241)
T PF11299_consen 106 LLLGLKREAIGATFSI---------GREPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLL---------- 166 (241)
T ss_pred HHhcccHHhhcceeec---------ccCcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHH----------
Confidence 4455666666643211 113555667788888877777777788888888887776654321
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHh
Q 011369 155 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 228 (487)
Q Consensus 155 ~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 228 (487)
.-+..+.| ...-.-.|+|.|..+.++..-+.+.+| +......++....+.+..+.|-.+.-+
T Consensus 167 ------a~~~~fhP-----~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 167 ------ASLGIFHP-----YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred ------HhccCCCH-----HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111 344455799999999999999999997 577777777777776666666544433
No 304
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=70.48 E-value=24 Score=32.64 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=57.3
Q ss_pred ccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHH-------HHhh--cchhHHHHHHHHHHhhhh
Q 011369 113 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT-------AGCG--SSFDFWSIAICRMLVGVG 183 (487)
Q Consensus 113 ~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~-------~~~~--~a~~~~~l~~~r~l~G~g 183 (487)
|-+--|.+.+.+.|...+.+|+...-++.|.--.-+.+.+-.++..++. +.++ ..++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4455688999999999999999988877775322222222222211111 1111 235678889999999999
Q ss_pred hhhhhhhhhhhhhh
Q 011369 184 EASFISLAAPFIDD 197 (487)
Q Consensus 184 ~g~~~~~~~~~i~~ 197 (487)
.|...|..+.++..
T Consensus 119 VG~EiPL~mrml~~ 132 (508)
T COG4262 119 VGAEIPLLMRMLQR 132 (508)
T ss_pred HhcchHHHHHHHHH
Confidence 99999999988877
No 305
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=60.51 E-value=1.4e+02 Score=27.46 Aligned_cols=35 Identities=9% Similarity=0.148 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhh-hhhhhhhcCCCCc
Q 011369 169 DFWSIAICRMLVGVGEASFISL-AAPFIDDNAPVPQ 203 (487)
Q Consensus 169 ~~~~l~~~r~l~G~g~g~~~~~-~~~~i~~~~~~~~ 203 (487)
+...-.+--.+++++.|.+.-+ ..-++.|....++
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~~ 294 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNKH 294 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 3444555666777777754433 3335555554443
No 306
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=56.83 E-value=41 Score=29.51 Aligned_cols=21 Identities=5% Similarity=-0.013 Sum_probs=12.1
Q ss_pred hhcchhHHHHHHHHHHHHhhh
Q 011369 326 LLQEKVYVVNVLGYIAYNFVI 346 (487)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~ 346 (487)
.+..|.++-.....|+.-++-
T Consensus 203 ~ffspifikaFsltF~aEwGD 223 (294)
T KOG2881|consen 203 LFFSPIFIKAFSLTFLAEWGD 223 (294)
T ss_pred HhccHHHHHHHHHHHHHHhcc
Confidence 345566766666666555443
No 307
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=56.62 E-value=0.79 Score=39.94 Aligned_cols=42 Identities=10% Similarity=-0.036 Sum_probs=26.8
Q ss_pred HHhhhcchhHHHHHHHHHHHHhhheeeeecccceeeeccccc
Q 011369 323 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 364 (487)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 364 (487)
+...+++-.+.-..+.+.+.-...+.-..|+|.|..+..+++
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~ 235 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQME 235 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHH
Confidence 334456666666666766666666666677777776655554
No 308
>PRK10263 DNA translocase FtsK; Provisional
Probab=55.83 E-value=59 Score=36.03 Aligned_cols=20 Identities=15% Similarity=0.243 Sum_probs=10.6
Q ss_pred hhhhhHHHHHHhhccccchH
Q 011369 217 TGVALGYVYGGVVGSHLNWR 236 (487)
Q Consensus 217 ~G~~~g~~~~~~l~~~~~wr 236 (487)
.|+++|.+++.++...+|.-
T Consensus 142 gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHH
Confidence 45555555555555544443
No 309
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=54.54 E-value=72 Score=28.39 Aligned_cols=92 Identities=10% Similarity=0.078 Sum_probs=50.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhhh-cCCCeEeh----hHHHHHHHHHHHhh-cc----hhHHHHHHHHHHhhhhhhhhhhhh
Q 011369 122 LSSAFMVGLLVASPIFASLAKS-HNPFRLIG----VGLSVWTFATAGCG-SS----FDFWSIAICRMLVGVGEASFISLA 191 (487)
Q Consensus 122 ~~s~~~~~~~i~~~~~g~l~dr-~Grr~~l~----~~~~~~~~~~~~~~-~a----~~~~~l~~~r~l~G~g~g~~~~~~ 191 (487)
..-++..|..+|....|+.... +.||+.+. .+.+++.+..+..+ .. .++..+++.-++.|+..=+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3445666667777777877654 45555443 23334444333321 11 146778888888888765566655
Q ss_pred hhhhhhc--CCCCchhHHHHHHHh
Q 011369 192 APFIDDN--APVPQKTAWLSMFYM 213 (487)
Q Consensus 192 ~~~i~~~--~~~~~r~~~~~~~~~ 213 (487)
..+=.|+ ..|++-|...|+...
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWG 249 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWG 249 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHH
Confidence 5554554 234455555554433
No 310
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=51.15 E-value=3.3e+02 Score=28.93 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=22.2
Q ss_pred HHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHH
Q 011369 210 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 246 (487)
Q Consensus 210 ~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~ 246 (487)
+...+..++.++..+++.++....+|..++++.++++
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3344445555555555555545577888777776654
No 311
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=49.08 E-value=71 Score=20.67 Aligned_cols=43 Identities=23% Similarity=0.269 Sum_probs=30.2
Q ss_pred hhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhc
Q 011369 214 CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 214 ~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
+.-+|.++|.+.+..-...++++....+..+++++..++....
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i 52 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVI 52 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3446777777777777677888888777777776666665544
No 312
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=48.80 E-value=2.8e+02 Score=27.44 Aligned_cols=76 Identities=17% Similarity=0.144 Sum_probs=53.7
Q ss_pred HHhhhhhhhhhhhhhhhhhhcCCC-CchhHHHHHHHhhhhhh-hhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 178 MLVGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTG-VALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 178 ~l~G~g~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G-~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
...|++.......--+-+.+.+|. +++...+|-++...++- .++.-.+++-+....||-+.-.+.=++.++.+++.
T Consensus 292 l~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lF 369 (509)
T COG3202 292 LAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLF 369 (509)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 445666666666666777778774 45788888888877776 55666778889999999887777666655554443
No 313
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=48.35 E-value=1.5e+02 Score=28.83 Aligned_cols=98 Identities=9% Similarity=-0.143 Sum_probs=66.2
Q ss_pred cccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcc---hhHHHHHHHHHHhhhhh
Q 011369 108 IQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGE 184 (487)
Q Consensus 108 i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a---~~~~~l~~~r~l~G~g~ 184 (487)
+..++|++.++...+.+.-.+...++.++--....++|-|-....+.-...++.+..... ......+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 667899999999999999999999999887664444555655555555555555444433 23667777777777665
Q ss_pred hhhhhhhhhhhhhcCCCCchh
Q 011369 185 ASFISLAAPFIDDNAPVPQKT 205 (487)
Q Consensus 185 g~~~~~~~~~i~~~~~~~~r~ 205 (487)
-...+.....+...+||---|
T Consensus 120 ~li~~~~~~~l~rlfPPvVtG 140 (451)
T COG2233 120 FLISPIVKIRLARLFPPVVTG 140 (451)
T ss_pred HHHHHHHHHHHHHhCCCceEE
Confidence 544443333788888885544
No 314
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.79 E-value=23 Score=28.40 Aligned_cols=51 Identities=8% Similarity=0.059 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhh
Q 011369 168 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 221 (487)
Q Consensus 168 ~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 221 (487)
+++..+++.-.+.|+|. ....+.+++--..+++-|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 45555555555555543 3456777777788888999999888877776554
No 315
>COG2119 Predicted membrane protein [Function unknown]
Probab=44.35 E-value=62 Score=26.84 Aligned_cols=73 Identities=11% Similarity=0.033 Sum_probs=45.2
Q ss_pred HHHHHHHHHhhhcccccccccCCccccCCCCcccCCCccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeE
Q 011369 70 FCVINMLNYVDRGAIASNGVNGSQRTCDDKGICTSGSGIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRL 149 (487)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~p~l~~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~ 149 (487)
+...+....-|++-++.. .+..+.+......-=......+...++-..+.++++|+..|++
T Consensus 106 fi~~FlaE~GDKTQiATI-------------------aLaA~~~~~~~V~~Gt~lg~~l~s~laVl~G~~ia~ki~~r~l 166 (190)
T COG2119 106 FITFFLAELGDKTQIATI-------------------ALAADYHSPWAVFAGTTLGMILASVLAVLLGKLIAGKLPERLL 166 (190)
T ss_pred HHHHHHHHhccHHHHHHH-------------------HHhhcCCCceeeehhhHHHHHHHHHHHHHHHHHHHccCCHHHH
Confidence 344445566778777653 3556666432222112234455667777888889999999988
Q ss_pred ehhHHHHHHHHH
Q 011369 150 IGVGLSVWTFAT 161 (487)
Q Consensus 150 l~~~~~~~~~~~ 161 (487)
-.++.+++.+..
T Consensus 167 ~~~aallFl~fa 178 (190)
T COG2119 167 RFIAALLFLIFA 178 (190)
T ss_pred HHHHHHHHHHHH
Confidence 777777665544
No 316
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=43.44 E-value=55 Score=24.26 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=13.6
Q ss_pred cccchhhhhhhhhHhhhcccc
Q 011369 376 VCGIVGTISGGFILDQMGATI 396 (487)
Q Consensus 376 ~~~~~~~~~~g~l~d~~~~~~ 396 (487)
+.+++-....||+.||+-...
T Consensus 53 IsGilVGa~iG~llD~~agTs 73 (116)
T COG5336 53 ISGILVGAGIGWLLDKFAGTS 73 (116)
T ss_pred HHHHHHHHHHHHHHHHhcCCC
Confidence 334444556789999986654
No 317
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.36 E-value=45 Score=24.69 Aligned_cols=52 Identities=19% Similarity=0.070 Sum_probs=42.4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch
Q 011369 117 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 168 (487)
Q Consensus 117 ~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 168 (487)
+..|-+..+|.-.+.+.++.+++..|+.-+-+.=.+|..+..++..+..+.|
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 4567788899999999999999999999888887788887777776655543
No 318
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=42.14 E-value=92 Score=25.00 Aligned_cols=26 Identities=23% Similarity=0.413 Sum_probs=22.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCe
Q 011369 123 SSAFMVGLLVASPIFASLAKSHNPFR 148 (487)
Q Consensus 123 ~s~~~~~~~i~~~~~g~l~dr~Grr~ 148 (487)
+.-|.+|+.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 35788999999999999999988875
No 319
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=39.64 E-value=70 Score=32.07 Aligned_cols=25 Identities=4% Similarity=0.098 Sum_probs=16.2
Q ss_pred eeecccchhhhhhhhhHhhhcccch
Q 011369 373 VTIVCGIVGTISGGFILDQMGATIS 397 (487)
Q Consensus 373 ~~~~~~~~~~~~~g~l~d~~~~~~~ 397 (487)
...+.+.++...++++-..++.++.
T Consensus 305 ~y~~~~~iaGy~S~~~yk~~~g~~W 329 (521)
T PF02990_consen 305 LYALTSFIAGYVSARLYKSFGGKKW 329 (521)
T ss_pred HHHHHhhHHHHHHHHHHHHcCCCce
Confidence 3446666777777777777766543
No 320
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=39.17 E-value=1.3e+02 Score=20.86 Aligned_cols=51 Identities=10% Similarity=0.129 Sum_probs=26.4
Q ss_pred HHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 208 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 208 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
--+.+....++.+++-++|. +.+ +.+.++++.++-.++. .+..+|+++...
T Consensus 10 e~l~~~il~~~~iisfi~Gy-~~q--~~~~~~~~~~~g~~~~---~lv~vP~Wp~y~ 60 (76)
T PF06645_consen 10 EKLMQYILIISAIISFIVGY-ITQ--SFSYTFYIYGAGVVLT---LLVVVPPWPFYN 60 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHH--HHHHHHHHHHHHHHHH---HhheeCCcHhhc
Confidence 34445555555555555443 333 2566776665443333 333457776543
No 321
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=39.13 E-value=1e+02 Score=24.67 Aligned_cols=52 Identities=13% Similarity=0.170 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcchhHHHHHHHHHHh
Q 011369 123 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 180 (487)
Q Consensus 123 ~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~ 180 (487)
.-.++++..+.+...-.+..|..||+.=.++.-+ ..+.++|..|+.++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 3567788888888888899999888876665543 356689999988888764
No 322
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=37.58 E-value=1.4e+02 Score=27.31 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=19.6
Q ss_pred hhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHH
Q 011369 204 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYA 238 (487)
Q Consensus 204 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~ 238 (487)
....-+++....-.-+-+|.++++.+....+|.|.
T Consensus 153 lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 153 LNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWL 187 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33334444443333334556666777777788874
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=36.67 E-value=1.9e+02 Score=26.16 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHhhcc-hhHHHHHHHHHHhhhhhhhh
Q 011369 151 GVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 151 ~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~g~g~~ 187 (487)
+++++++++.+++..++ ++.|.+.+.-++.+++.++.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 34455554555555544 45556666666666666544
No 324
>PRK02237 hypothetical protein; Provisional
Probab=35.49 E-value=83 Score=23.44 Aligned_cols=51 Identities=14% Similarity=0.023 Sum_probs=41.3
Q ss_pred ccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHhhcch
Q 011369 118 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF 168 (487)
Q Consensus 118 ~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 168 (487)
..|-+..+|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.|
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 467888899999999999999999999887777778777777766554443
No 325
>PRK10720 uracil transporter; Provisional
Probab=35.21 E-value=2.3e+02 Score=27.64 Aligned_cols=30 Identities=17% Similarity=-0.201 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhccccccCCC
Q 011369 235 WRYAFWGEAILMLPFAVLAFVIKPLQLKGF 264 (487)
Q Consensus 235 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 264 (487)
++..+......+.+.+++.-++.|.+.+++
T Consensus 383 ~~~~~~~gi~~g~~~ai~Lnlll~~~~~~~ 412 (428)
T PRK10720 383 IGAAELKGMALATIVGIGLSLIFKLISKLR 412 (428)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHhccccccc
Confidence 344444444444555555555556544443
No 326
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=34.86 E-value=1.2e+02 Score=25.35 Aligned_cols=25 Identities=16% Similarity=0.425 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhcCCC
Q 011369 123 SSAFMVGLLVASPIFASLAKSHNPF 147 (487)
Q Consensus 123 ~s~~~~~~~i~~~~~g~l~dr~Grr 147 (487)
+.-|.+++.+...+.|++.||.-+|
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~~ 112 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRKR 112 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcc
Confidence 4578899999999999999998753
No 327
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=32.96 E-value=91 Score=31.66 Aligned_cols=81 Identities=22% Similarity=0.265 Sum_probs=65.0
Q ss_pred ehhHHHHHHHHHHHhhcc-----------------hhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHH
Q 011369 150 IGVGLSVWTFATAGCGSS-----------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFY 212 (487)
Q Consensus 150 l~~~~~~~~~~~~~~~~a-----------------~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 212 (487)
+-+|+++..+.....+.. -|+++++---++.|++.........-+.-+-+|++-|..+.+++.
T Consensus 421 ig~G~~~si~sm~~aa~vE~krl~~~~~~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l 500 (571)
T KOG1237|consen 421 IGIGLVLSILSMAVAGIVEAKRLKTAVSLLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWL 500 (571)
T ss_pred eeccchHHHHHHHHHHHHHHHHhhhhhhccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHH
Confidence 445666666665554431 257778888899999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHhhc
Q 011369 213 MCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 213 ~~~~~G~~~g~~~~~~l~ 230 (487)
...++|..+...+.....
T Consensus 501 ~t~a~G~~lss~Lv~~v~ 518 (571)
T KOG1237|consen 501 LTVAVGNYLSSVLVSLVQ 518 (571)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999888875543
No 328
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=32.55 E-value=1.1e+02 Score=28.67 Aligned_cols=14 Identities=14% Similarity=0.154 Sum_probs=9.8
Q ss_pred hhhcCCCeEehhHH
Q 011369 141 AKSHNPFRLIGVGL 154 (487)
Q Consensus 141 ~dr~Grr~~l~~~~ 154 (487)
.||+.-.|++.+.+
T Consensus 208 ~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 208 VERFTLSKLLAVFV 221 (416)
T ss_pred cchhhHHHHHHHHH
Confidence 79998888754433
No 329
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=32.19 E-value=59 Score=24.26 Aligned_cols=30 Identities=20% Similarity=0.224 Sum_probs=22.5
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHhhcccc
Q 011369 230 GSHLNWRYAFWGEAILMLPFAVLAFVIKPL 259 (487)
Q Consensus 230 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 259 (487)
.+..+|+.+|++...++++.+.+.+.+.|+
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD 83 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPD 83 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 355689999998877777777777766665
No 330
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=31.15 E-value=5.5e+02 Score=27.94 Aligned_cols=55 Identities=7% Similarity=-0.060 Sum_probs=28.8
Q ss_pred ccccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHH
Q 011369 107 GIQGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 163 (487)
Q Consensus 107 ~i~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 163 (487)
.+...+|+++...|+..-+ +|..+.-++....+-|-|.-.+.+..++..-++.++
T Consensus 958 ~IG~vlGIse~VmGlTfLA--~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnIl 1012 (1096)
T TIGR00927 958 QVGETIGISEEIMGLTILA--AGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDIT 1012 (1096)
T ss_pred HhhhhcCCChhhhhhhhhh--hhcccHHHHHHHHHHHccCCcceeeeccccchheee
Confidence 3555566666555544332 355555555555555656555555444444444443
No 331
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=29.89 E-value=1.4e+02 Score=18.46 Aligned_cols=37 Identities=14% Similarity=0.103 Sum_probs=17.7
Q ss_pred hhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 217 TGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 217 ~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
+|+.+|..+.+.+....++.+.-++.++++.+..+..
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 3444444444444333334555556665555544443
No 332
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=29.32 E-value=2.3e+02 Score=27.68 Aligned_cols=50 Identities=20% Similarity=0.130 Sum_probs=31.8
Q ss_pred CCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHHHHHHHHHH
Q 011369 199 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 253 (487)
Q Consensus 199 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 253 (487)
+.+++.+..+++++++.+.|.+.-|+..+. +|=++..+..+++.+.....
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p~m~~s 66 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYPIAFYC 66 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHHHHHHH
Confidence 345677888899998888888877766543 34455555554444443333
No 333
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=28.12 E-value=5.5e+02 Score=24.74 Aligned_cols=96 Identities=15% Similarity=-0.042 Sum_probs=59.2
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHHHHHHHHh-hcchhHHHHHHHHHHhhhhhhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC-GSSFDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~-~~a~~~~~l~~~r~l~G~g~g~~ 187 (487)
.+..|+++++...+.+...+..+++.++-.+-.-++|.|..+..+.....+..... .....+...+.+-++.|+-.-..
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~ill 99 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILL 99 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 34568888888888888888888888876432225677766665554433333322 22345566666666667654433
Q ss_pred hhhhhhhhhhcCCCCchh
Q 011369 188 ISLAAPFIDDNAPVPQKT 205 (487)
Q Consensus 188 ~~~~~~~i~~~~~~~~r~ 205 (487)
. .....+.+.+|+.-.|
T Consensus 100 g-~~~~~l~~~iPp~v~G 116 (406)
T TIGR03173 100 A-PFFSKLVRFFPPVVTG 116 (406)
T ss_pred H-HHHHHHHHHCCcHHHH
Confidence 3 3555678888874444
No 334
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=27.75 E-value=4.7e+02 Score=23.80 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=38.1
Q ss_pred HHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhh
Q 011369 160 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 229 (487)
Q Consensus 160 ~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 229 (487)
.+++..+.++.. --..|.+.|+-.- ....+++++.-.||++++--..--...+.+++.++-+++|-.+
T Consensus 10 ~~~~~~~~~~~~-~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 10 LALLAILVPDLN-IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred HHHHHHHhhhcc-hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344333 5678888888765 4456899999999965543222222333344445555555443
No 335
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=27.66 E-value=6e+02 Score=25.13 Aligned_cols=33 Identities=9% Similarity=-0.180 Sum_probs=22.6
Q ss_pred CCCeEehhHHHHHHHHHHHhhcchhHHHHHHHH
Q 011369 145 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICR 177 (487)
Q Consensus 145 Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r 177 (487)
|.|+...-..+.+.++.++.++.+++....+.-
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~~ 371 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQS 371 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 444445555677778899999998877665433
No 336
>PRK11588 hypothetical protein; Provisional
Probab=27.31 E-value=6.4e+02 Score=25.21 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=23.5
Q ss_pred HHHhhhhcCCCeEehh--HHHHHHHHHHHhhcchhHHHHHH
Q 011369 137 FASLAKSHNPFRLIGV--GLSVWTFATAGCGSSFDFWSIAI 175 (487)
Q Consensus 137 ~g~l~dr~Grr~~l~~--~~~~~~~~~~~~~~a~~~~~l~~ 175 (487)
.+++.+|++.|..+++ .+++++++....+++.....++-
T Consensus 136 i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~p 176 (506)
T PRK11588 136 ILALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAI 176 (506)
T ss_pred HHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 4677888877654443 44556666666677665444433
No 337
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=27.21 E-value=31 Score=26.91 Aligned_cols=21 Identities=14% Similarity=0.385 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 011369 236 RYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 236 r~~f~~~~~~~~~~~~~~~~~ 256 (487)
||++++..++.+++++++++.
T Consensus 1 RW~l~~iii~~i~l~~~~~~~ 21 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFYC 21 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHHH
Confidence 566665555544444443333
No 338
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=26.87 E-value=2.6e+02 Score=20.64 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=16.4
Q ss_pred hhhhhhhHHHHHHhhccccc----hHHHHHHHHHHH
Q 011369 215 IPTGVALGYVYGGVVGSHLN----WRYAFWGEAILM 246 (487)
Q Consensus 215 ~~~G~~~g~~~~~~l~~~~~----wr~~f~~~~~~~ 246 (487)
..+..++|..+|-++-.+++ |..+|++.|+..
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~ 87 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVI 87 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH
Confidence 33444455555555555443 555666555543
No 339
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=25.77 E-value=2.8e+02 Score=29.18 Aligned_cols=54 Identities=19% Similarity=0.186 Sum_probs=34.7
Q ss_pred HHHHHHhhhhc----CCCeEehhHHHHHHHHHHHhhcchh-HHHHHHHHHHhhhhhhhh
Q 011369 134 SPIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEASF 187 (487)
Q Consensus 134 ~~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~a~~-~~~l~~~r~l~G~g~g~~ 187 (487)
+.+.+-++|.= ||.+-++++.++++++++...+... .+.+..+-++.+++.++.
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 33444566654 4467788888888888887776544 455566666666665543
No 340
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=25.36 E-value=1.5e+02 Score=26.72 Aligned_cols=35 Identities=11% Similarity=-0.047 Sum_probs=21.2
Q ss_pred hHHHHhhhcchhHHHHHHHHHHHHhhheeeeeccc
Q 011369 320 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 354 (487)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 354 (487)
++..+++.++|+.+............+.....|.|
T Consensus 59 ~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 59 WRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 34555677888776666665555555555555554
No 341
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=25.35 E-value=3.8e+02 Score=23.88 Aligned_cols=14 Identities=14% Similarity=-0.054 Sum_probs=6.5
Q ss_pred ccCccccchhhhHH
Q 011369 113 KLNNFQDGVLSSAF 126 (487)
Q Consensus 113 ~~s~~~~~~~~s~~ 126 (487)
+.|...+.++.+-+
T Consensus 214 ~as~~~ldYvFs~f 227 (254)
T PF07857_consen 214 GASQNGLDYVFSHF 227 (254)
T ss_pred CCCCcchheeHHHH
Confidence 34444555554433
No 342
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=25.34 E-value=3.9e+02 Score=22.61 Aligned_cols=15 Identities=7% Similarity=-0.232 Sum_probs=9.3
Q ss_pred hheeeeecccceeee
Q 011369 345 VIGAYSYWGPKAGYN 359 (487)
Q Consensus 345 ~~~~~~~~~p~~~~~ 359 (487)
+---+..|.|.+...
T Consensus 109 GgDNigIYiP~Fa~~ 123 (191)
T PF03596_consen 109 GGDNIGIYIPLFASL 123 (191)
T ss_pred CCCeEEEeehhhhcC
Confidence 344466778877654
No 343
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=25.02 E-value=2.9e+02 Score=29.05 Aligned_cols=53 Identities=15% Similarity=0.110 Sum_probs=33.1
Q ss_pred HHHHHhhhhc----CCCeEehhHHHHHHHHHHHhhcc-hhHHHHHHHHHHhhhhhhhh
Q 011369 135 PIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASF 187 (487)
Q Consensus 135 ~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~a-~~~~~l~~~r~l~G~g~g~~ 187 (487)
.+.+-++|.= ||.+-++++.+++.++++...+. +..|.+..+-++.+++.++.
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 3345566753 45566778888888777776655 44556666666666665543
No 344
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=24.99 E-value=3e+02 Score=20.64 Aligned_cols=47 Identities=9% Similarity=0.000 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhhhhcCC
Q 011369 154 LSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 200 (487)
Q Consensus 154 ~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~ 200 (487)
.++..+++++.++......---.|.+.+.|..+..+.-.++..|...
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 34556666665544321100113444555555566777777777765
No 345
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=24.89 E-value=4.3e+02 Score=22.41 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=24.0
Q ss_pred CCchhHHHHHHHhhhhhhhhhHHHHHHhhcc
Q 011369 201 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 231 (487)
Q Consensus 201 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 231 (487)
.++.+++.++--.+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888888888877654
No 346
>COG3619 Predicted membrane protein [Function unknown]
Probab=24.83 E-value=4.7e+02 Score=22.82 Aligned_cols=119 Identities=13% Similarity=0.136 Sum_probs=53.6
Q ss_pred ccccchhhhHHHHHHHHHHHHHHHhhhhcCC-Ce-E-ehhHHHHHHHHHHHhhc----chhHHHHHHHHHHhh-------
Q 011369 116 NFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FR-L-IGVGLSVWTFATAGCGS----SFDFWSIAICRMLVG------- 181 (487)
Q Consensus 116 ~~~~~~~~s~~~~~~~i~~~~~g~l~dr~Gr-r~-~-l~~~~~~~~~~~~~~~~----a~~~~~l~~~r~l~G------- 181 (487)
+...........+...++......+..|..| .. . ...+.++.....+..++ +++....+..-+..|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3344555566777777776666555555554 11 1 12222222333333333 235555444444444
Q ss_pred ----hhhhhhhhh-----hhhhhhhcCCCC-chhHHHHHHHhhhhhhhhhHHHHHHhhccccc
Q 011369 182 ----VGEASFISL-----AAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 234 (487)
Q Consensus 182 ----~g~g~~~~~-----~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 234 (487)
.+.+..+.. ...-+.++...| +.-..-...+...-++.++|...++++...+|
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 222222211 112234444432 22222334444455666666666666665444
No 347
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=24.77 E-value=1.5e+02 Score=21.13 Aligned_cols=46 Identities=15% Similarity=0.045 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhhhhcCC-------CeEehhHHHHHHHHHHHhhcchhH
Q 011369 125 AFMVGLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFDF 170 (487)
Q Consensus 125 ~~~~~~~i~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~a~~~ 170 (487)
....+.....+.++++.+|..+ ++.+.++.++...+.++++..+|.
T Consensus 26 ~~~a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 26 AIWAGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556677777888888765 677777777777788877776553
No 348
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=24.55 E-value=7.7e+02 Score=25.21 Aligned_cols=23 Identities=26% Similarity=0.339 Sum_probs=9.9
Q ss_pred hhhhhhhhhHHHHHHhhccccch
Q 011369 213 MCIPTGVALGYVYGGVVGSHLNW 235 (487)
Q Consensus 213 ~~~~~G~~~g~~~~~~l~~~~~w 235 (487)
..+.+|.++...+.|.+....||
T Consensus 213 l~y~lG~~~ty~~lG~~a~~~G~ 235 (571)
T PRK00293 213 FVYVQGMALTYTLLGLVVAAAGL 235 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445554444444444333333
No 349
>COG3771 Predicted membrane protein [Function unknown]
Probab=24.02 E-value=1.2e+02 Score=21.37 Aligned_cols=30 Identities=27% Similarity=0.473 Sum_probs=20.0
Q ss_pred ccccccCccccchhhhHHHHHHHHHHHHHHHhhh
Q 011369 109 QGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK 142 (487)
Q Consensus 109 ~~~~~~s~~~~~~~~s~~~~~~~i~~~~~g~l~d 142 (487)
+.||.+| .++.+.|.+|.+++-++.|.+--
T Consensus 36 qgef~LS----TLla~lF~~G~~lgwli~g~fy~ 65 (97)
T COG3771 36 QGEFRLS----TLLATLFAAGFALGWLICGLFYL 65 (97)
T ss_pred cchhhHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456655 45667788888888777776543
No 350
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=23.45 E-value=2.5e+02 Score=23.47 Aligned_cols=58 Identities=9% Similarity=-0.085 Sum_probs=32.9
Q ss_pred hhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHHH
Q 011369 186 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 245 (487)
Q Consensus 186 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~ 245 (487)
.-+....+++.+..|+++|.++.-+-..+..+--.+.-.++.++.+. |++..++.|+.
T Consensus 12 ~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 12 IDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred hhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 35556677788889987776655433333333334444555566654 45566666543
No 351
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=23.41 E-value=5.4e+02 Score=22.98 Aligned_cols=59 Identities=5% Similarity=-0.169 Sum_probs=33.5
Q ss_pred hhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHH
Q 011369 184 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 244 (487)
Q Consensus 184 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~ 244 (487)
-|.-+....+++.+..|+++|.++.=+--.+..+=-.+--..+.++.+. |.+.+.+.+.
T Consensus 30 L~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l--~~~l~~~fg~ 88 (254)
T COG0861 30 LGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL--TQPLLYIFGL 88 (254)
T ss_pred HHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 4456777888999999988877755332222222222333344455554 6666666443
No 352
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=22.81 E-value=4.5e+02 Score=25.42 Aligned_cols=51 Identities=8% Similarity=0.078 Sum_probs=32.0
Q ss_pred HHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHH
Q 011369 176 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (487)
Q Consensus 176 ~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 226 (487)
.-++.|+..|........++.+...-++---+.++...+.-+|.++.++++
T Consensus 281 ~A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 281 GAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 334556655655555555566666555555577888777777777766665
No 353
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=22.67 E-value=1.7e+02 Score=24.14 Aligned_cols=35 Identities=9% Similarity=0.082 Sum_probs=21.0
Q ss_pred Ccccccc-ccC------ccccchhhhHHHHHHHHHHHHHHHh
Q 011369 106 SGIQGDF-KLN------NFQDGVLSSAFMVGLLVASPIFASL 140 (487)
Q Consensus 106 ~~i~~~~-~~s------~~~~~~~~s~~~~~~~i~~~~~g~l 140 (487)
|.+..|+ |++ .+...|......+..+..++..|..
T Consensus 43 pY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~~ 84 (168)
T PF07099_consen 43 PYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGFL 84 (168)
T ss_pred hHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677765 444 3344566666666666666666644
No 354
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=21.98 E-value=2.9e+02 Score=25.57 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhc
Q 011369 170 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 230 (487)
Q Consensus 170 ~~~l~~~r~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~ 230 (487)
...+.++-++.|++.+.........-.|.+.. ......=++....+.|...||++|..+.
T Consensus 208 l~aF~isa~~AGiAGaL~a~~~~~v~p~~f~~-~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 208 LLAFVISAAIAGIAGALYALYLGFVSPESFSF-TLSIEVLAMVVLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhceeChhhccH-HHHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 34456666777776664433333333333332 2333333444555677888888887765
No 355
>KOG1397 consensus Ca2+/H+ antiporter VCX1 and related proteins [Inorganic ion transport and metabolism]
Probab=21.86 E-value=86 Score=29.46 Aligned_cols=17 Identities=12% Similarity=0.221 Sum_probs=11.9
Q ss_pred CccccccccCccccchh
Q 011369 106 SGIQGDFKLNNFQDGVL 122 (487)
Q Consensus 106 ~~i~~~~~~s~~~~~~~ 122 (487)
....+++++|..-+|++
T Consensus 314 d~~~ds~~ls~~Figli 330 (441)
T KOG1397|consen 314 DDVSDSWGLSVKFIGLI 330 (441)
T ss_pred HHHHHhcCCChhhheee
Confidence 56777888887766554
No 356
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=21.69 E-value=6.8e+02 Score=23.54 Aligned_cols=122 Identities=12% Similarity=0.084 Sum_probs=67.0
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhhhcCCCeEehhHHHHH---HHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhhhhhhh
Q 011369 119 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW---TFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFI 195 (487)
Q Consensus 119 ~~~~~s~~~~~~~i~~~~~g~l~dr~Grr~~l~~~~~~~---~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~~~~~i 195 (487)
.|....+..+... -.++.+++.+.+|.-+.+..+.++. +.-.+...+++|......+-.+.|.-.|....-....-
T Consensus 49 ~GI~~laP~la~~-l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPVa 127 (354)
T PF04346_consen 49 AGIMALAPVLAAF-LSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPVA 127 (354)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhhh
Confidence 4444455555543 4556678899999999988887773 44556667777777777776666665554443333333
Q ss_pred hhcCCC-CchhHHHHHHHhhhhhhhhhHHHHHHhhccccchHHHHHHHHH
Q 011369 196 DDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 244 (487)
Q Consensus 196 ~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~ 244 (487)
-...++ +++-.+.|+...... .-+|.++++.+. .++|...+.-...
T Consensus 128 Lgii~k~D~~y~a~Gil~Giit--IPiG~~vggl~~-g~~~~~il~Nl~P 174 (354)
T PF04346_consen 128 LGIIEKEDHKYLAKGILAGIIT--IPIGCFVGGLIA-GFDIGMILINLIP 174 (354)
T ss_pred hhhcChhhhHHHHHHHHHHHhh--hCHHHHHHHHHH-hCCHHHHHHHHHH
Confidence 333333 344445555443322 123334444433 2455555544433
No 357
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=21.63 E-value=7.4e+02 Score=23.96 Aligned_cols=48 Identities=10% Similarity=0.118 Sum_probs=27.9
Q ss_pred HHhhhhhhhhhhhhhhhhhhcCCCCchhHHHHHHHhhhhhhhhhHHHHH
Q 011369 178 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 226 (487)
Q Consensus 178 ~l~G~g~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 226 (487)
++.|+-.|........++ |...-++---+.++...+...|.++.++++
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344555554544444444 455555555677777777766766666554
No 358
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=21.48 E-value=2.7e+02 Score=18.73 Aligned_cols=28 Identities=11% Similarity=0.113 Sum_probs=15.3
Q ss_pred chHHHHHHHHHHHHHHHHHHhhcccccc
Q 011369 234 NWRYAFWGEAILMLPFAVLAFVIKPLQL 261 (487)
Q Consensus 234 ~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 261 (487)
||-.++.+...+.++..-.+=.++||..
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s 56 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERS 56 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhc
Confidence 4666666555554444444445567743
No 359
>PRK10263 DNA translocase FtsK; Provisional
Probab=20.96 E-value=1.3e+03 Score=26.48 Aligned_cols=21 Identities=10% Similarity=0.284 Sum_probs=16.4
Q ss_pred ecccchhhhhhhhhHhhhccc
Q 011369 375 IVCGIVGTISGGFILDQMGAT 395 (487)
Q Consensus 375 ~~~~~~~~~~~g~l~d~~~~~ 395 (487)
..++++|.+++..+...+|..
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHH
Confidence 458888888888888888764
No 360
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.61 E-value=5e+02 Score=23.18 Aligned_cols=18 Identities=6% Similarity=-0.330 Sum_probs=8.2
Q ss_pred hhheeeeecccceeeecc
Q 011369 344 FVIGAYSYWGPKAGYNIY 361 (487)
Q Consensus 344 ~~~~~~~~~~p~~~~~~~ 361 (487)
..+++..+.=..|.++..
T Consensus 192 GvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 192 GVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHhcccchHHHHHhCc
Confidence 334444443344555543
No 361
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=20.42 E-value=1.9e+02 Score=23.81 Aligned_cols=60 Identities=8% Similarity=-0.037 Sum_probs=34.7
Q ss_pred hcCCCCchhHHHHHHHhhhhhhhhhHHHHHHhhcccc------chHHHHHHHHHHHHHHHHHHhhc
Q 011369 197 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL------NWRYAFWGEAILMLPFAVLAFVI 256 (487)
Q Consensus 197 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~------~wr~~f~~~~~~~~~~~~~~~~~ 256 (487)
..++.+++.+..+.+.++.-.+...=-.+=+.+.... .+...+++.++++.+..+++-.+
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 3455555666666555554444333333333333322 58889999998887777665444
No 362
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=20.24 E-value=9.8e+02 Score=25.37 Aligned_cols=37 Identities=16% Similarity=0.131 Sum_probs=24.4
Q ss_pred eEehhHHHHHHHHHHHhhcchhHHHHHHHHHHhhhhhhhhhhh
Q 011369 148 RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 190 (487)
Q Consensus 148 ~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G~g~g~~~~~ 190 (487)
+++.+|.++..+|..+..+.. +=|.+|.++---+.|.
T Consensus 497 wVi~IGsFlST~GAgLQsLtg------APRLLQAIAkD~IiPf 533 (1075)
T KOG2082|consen 497 WVIVIGSFLSTCGAGLQSLTG------APRLLQAIAKDDIIPF 533 (1075)
T ss_pred eeeehhHHHHHhHHHHhhhcC------cHHHHHHHhhcCccch
Confidence 677888888888887777653 3466666655544443
Done!