Your job contains 1 sequence.
>011370
MVLEPNGAVWMEGEEEQPLSVSWTTAAAATATTTARATTEPKEDEMHVNAVSLSGFKSIL
DTDWFLNSTLNNPPQDFTNTTGLLETHQELRAFNAFQETNLFFQPIESHPFTLNPTHSLL
PPNNNDNNSNSHLPFVSGFDLGGEAAGFIQPASGFMGLTTTQICATNDSDFHGFGSSYSN
CFDNLEGLFFNSNSKAKVCSQSQPTLFEKRAALRQSSGKLENLEILGGNLLLENIKCRKN
EEASVDISSLNYESDEYNNNNNNNNASNDNNVNGKVDESVKNWNAGGSATVGDNKGKRKG
LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNEL
ESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFC
ARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLLDT
AGFHDVM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011370
(487 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 819 2.9e-92 3
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 783 2.0e-83 3
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 363 2.5e-33 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 356 1.4e-32 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 242 7.6e-32 2
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 343 3.3e-31 1
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 303 2.8e-26 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 203 3.3e-17 2
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 199 4.5e-14 2
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 187 5.3e-14 1
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 195 3.7e-13 1
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 192 2.4e-12 1
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 169 4.9e-12 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 189 6.1e-12 2
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 181 2.2e-11 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 182 2.4e-11 2
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 178 3.0e-11 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 174 3.8e-11 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 185 3.9e-11 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 183 4.6e-11 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 182 5.0e-11 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 164 1.2e-10 2
UNIPROTKB|Q5Z988 - symbol:P0548E04.5 "Os06g0724800 protei... 156 1.3e-10 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 160 2.0e-10 2
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 161 2.1e-10 2
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 171 2.2e-10 1
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 172 8.3e-10 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 172 8.4e-10 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 164 1.3e-09 1
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 167 1.9e-09 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 162 4.3e-09 1
TAIR|locus:2009537 - symbol:AT1G22490 "AT1G22490" species... 159 5.4e-09 1
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 155 8.6e-09 1
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 162 1.0e-08 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 160 1.1e-08 1
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 162 1.2e-08 1
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 156 1.5e-08 1
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 150 1.6e-08 3
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 156 1.8e-08 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 157 2.4e-08 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 134 2.6e-08 2
TAIR|locus:2042486 - symbol:AT2G31220 "AT2G31220" species... 143 3.1e-08 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 150 6.8e-08 1
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 150 1.5e-07 1
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 112 1.6e-07 2
UNIPROTKB|Q8LII5 - symbol:OJ1167_G06.116 "Putative unchar... 93 1.8e-07 2
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 139 4.0e-07 2
UNIPROTKB|Q7XLY9 - symbol:OSJNBa0086O06.20 "OSJNBa0086O06... 118 6.6e-07 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 140 8.9e-07 1
TAIR|locus:2207061 - symbol:AT1G72210 "AT1G72210" species... 138 1.5e-06 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 135 2.5e-06 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 112 2.9e-06 2
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 119 3.6e-06 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 137 4.0e-06 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 136 4.1e-06 1
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 135 4.2e-06 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 133 4.8e-06 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 135 6.2e-06 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 134 8.4e-06 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 133 8.7e-06 2
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 110 1.3e-05 1
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 131 1.3e-05 1
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 126 1.3e-05 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 131 1.5e-05 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 130 1.6e-05 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 125 1.6e-05 1
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 128 1.7e-05 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 128 1.9e-05 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 131 1.9e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 129 2.2e-05 1
TAIR|locus:2168235 - symbol:AT5G65320 "AT5G65320" species... 126 3.0e-05 1
TAIR|locus:2038510 - symbol:AT1G06170 "AT1G06170" species... 127 4.5e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 127 6.4e-05 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 121 7.3e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 125 8.3e-05 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 117 0.00011 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 123 0.00012 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 123 0.00012 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 121 0.00013 1
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 124 0.00013 2
UNIPROTKB|Q8S0C6 - symbol:B1112D09.6 "Uncharacterized pro... 123 0.00014 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 114 0.00022 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 109 0.00026 2
UNIPROTKB|Q7XVB7 - symbol:OSJNBa0072D21.7 "OSJNBa0072D21.... 93 0.00030 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 118 0.00032 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 120 0.00033 1
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 119 0.00037 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 110 0.00039 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 120 0.00042 1
UNIPROTKB|Q10LR1 - symbol:Os03g0338400 "BHLH transcriptio... 107 0.00046 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 117 0.00046 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 113 0.00063 1
TAIR|locus:2828302 - symbol:AT2G40435 species:3702 "Arabi... 105 0.00066 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 110 0.00088 1
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 819 (293.4 bits), Expect = 2.9e-92, Sum P(3) = 2.9e-92
Identities = 163/212 (76%), Positives = 182/212 (85%)
Query: 277 DESVKNWNAGGSATVGDN-KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
DE ++ A S +G KGK+KG+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR
Sbjct: 279 DEINESGKAAESVQIGGGGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 338
Query: 336 ASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISR 395
ASILGDAIDYLKELLQRINDLHNELESTP GSL S+S P+TPTP TL CRVKEE+
Sbjct: 339 ASILGDAIDYLKELLQRINDLHNELESTPPGSLPPTSSSFHPLTPTPQTLSCRVKEELCP 398
Query: 396 S----PTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
S P G+ ARVEVR+REGRAVNIHMFC RRPGLLL+TM+ALD+LGLD+QQAVISCFNG
Sbjct: 399 SSLPSPKGQQARVEVRLREGRAVNIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNG 458
Query: 452 FALDVFRAEQCREGQDVLPKQIKSVLLDTAGF 483
FALDVFRAEQC+EGQ++LP QIK+VL DTAG+
Sbjct: 459 FALDVFRAEQCQEGQEILPDQIKAVLFDTAGY 490
Score = 77 (32.2 bits), Expect = 2.9e-92, Sum P(3) = 2.9e-92
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 161 TQICA--TNDSDFHGFGSSYSNCFDNLEGLFFNSNSKAKVCSQSQPTLFEKRAALRQSS 217
T +C T + GFGS + F + S +QPTLF+KRAA+RQSS
Sbjct: 186 TMLCGGFTAPLELEGFGSPANGGFVGNRAKVLKP-LEVLASSGAQPTLFQKRAAMRQSS 243
Score = 56 (24.8 bits), Expect = 2.9e-92, Sum P(3) = 2.9e-92
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 54 SGFKSILDTDWFLNSTLNNP-PQDFTNTTGLLETHQELRAFNAF 96
S FK +L+ DWF + N P PQD +L+ + R F F
Sbjct: 37 SQFKPMLEGDWFSS---NQPHPQDLQ----MLQNQPDFRYFGGF 73
Score = 47 (21.6 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 15/37 (40%), Positives = 17/37 (45%)
Query: 167 NDSDFHGFGSSYSNCFDNLEGLFFNSNSKAKVCSQSQ 203
N DF FG N DNL L +S + CS SQ
Sbjct: 63 NQPDFRYFGGFPFNPNDNL--LLQHSIDSSSSCSPSQ 97
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 783 (280.7 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 153/219 (69%), Positives = 180/219 (82%)
Query: 274 GKVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKM 333
G D K + S GD KGK+KG+PAKNLMAERRRRKKLNDRLYMLRSVVPKISKM
Sbjct: 306 GGEDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDRLYMLRSVVPKISKM 365
Query: 334 DRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPS-TSIQPMTPTPPTLPCRVKEE 392
DRASILGDAI+YLKELLQ+INDL NELES+P S + P+ TS P+TPT PTLP R+KEE
Sbjct: 366 DRASILGDAIEYLKELLQKINDLQNELESSPATSSLPPTPTSFHPLTPTLPTLPSRIKEE 425
Query: 393 ISRS----PTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISC 448
I S PTG+ RVEVR+REGRAVNIHMFCARRPGLLLS MRA++ LGLD+QQAVISC
Sbjct: 426 ICPSALPSPTGQQPRVEVRLREGRAVNIHMFCARRPGLLLSAMRAVEGLGLDVQQAVISC 485
Query: 449 FNGFALDVFRAEQCREGQDVLPKQIKSVLLDTAGFHDVM 487
FNGF LD+F+AEQC++G +LP++IK+VL+ +AGFH ++
Sbjct: 486 FNGFTLDIFKAEQCKDGPGLLPEEIKAVLMQSAGFHTMI 524
Score = 47 (21.6 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 202 SQPTLFEKRAALRQS 216
+QPTLF+KRA R +
Sbjct: 238 AQPTLFQKRALRRNA 252
Score = 38 (18.4 bits), Expect = 2.0e-83, Sum P(3) = 2.0e-83
Identities = 21/64 (32%), Positives = 28/64 (43%)
Query: 136 VSGFDLG---GEAAGFIQPASGFMG---LTTTQICATNDSDF----HGFGSSYSNC--FD 183
VSGFDLG G G S F+G + T + ++ F GFG++ S F
Sbjct: 119 VSGFDLGIACGGVGGGGDVVS-FLGGGNASNTALLPVGNAGFLGTFGGFGTAASQMPEFG 177
Query: 184 NLEG 187
L G
Sbjct: 178 GLAG 181
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 91/209 (43%), Positives = 122/209 (58%)
Query: 277 DESVKNWNAG--GSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 334
D+S K+++ G G T K +G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMD
Sbjct: 150 DQS-KSFSVGYCGGETNKKKSKKLEGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMD 208
Query: 335 RASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEIS 394
R SILGDAIDY+KELL +IN L +E + + S + P +
Sbjct: 209 RTSILGDAIDYMKELLDKINKLQDEEQELGNSNNSHHSKLFGDLKDLNANEPL-----VR 263
Query: 395 RSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
SP E R + E V+I C+ +PGLLLST+ L++LGL+I+Q VISCF+ F+L
Sbjct: 264 NSPKFEIDRRD----EDTRVDI--CCSPKPGLLLSTVNTLETLGLEIEQCVISCFSDFSL 317
Query: 455 DVFRAEQCREGQDVLPKQIKSVLLDTAGF 483
+E + + + IK L AG+
Sbjct: 318 QASCSEGAEQRDFITSEDIKQALFRNAGY 346
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 90/207 (43%), Positives = 126/207 (60%)
Query: 286 GGSATVGDNKGK--RKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 343
G +A+V + + G P+KNLMAERRRRK+LNDRL MLRSVVP+ISKMDR SILGD I
Sbjct: 176 GAAASVRPRSCRPPQPGAPSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTI 235
Query: 344 DYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPT--PPTLPCRVKEEISRSPTGEA 401
Y+KEL+ RI +L E + + S + S+ + PP+ + + R+ T
Sbjct: 236 GYVKELMDRIKNLQVEAATGDSSSSSTENLSMLKLNTLKPPPSSSSGEETPLIRNST--- 292
Query: 402 ARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDV--FRA 459
R EV RE + I M CA P LL ST+ AL++LG++I+Q VISCF+ FA+ +
Sbjct: 293 -RFEVERRENGSTRIEMACAAIPELLPSTLAALEALGVEIEQCVISCFDDFAMQASCLQD 351
Query: 460 EQCRE-GQDVLPKQIKSVLLDTAGFHD 485
++ RE +D ++IK L +AG+ D
Sbjct: 352 DKKREMTRDT--EEIKQTLFRSAGYGD 376
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 242 (90.2 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 52/92 (56%), Positives = 67/92 (72%)
Query: 276 VDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
++ES + G + NK K +G P+KNLMAERRRRK+LNDRL +LRS+VPKI+KMDR
Sbjct: 124 MEESKSFISIGETNKKRSNK-KLEGQPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDR 182
Query: 336 ASILGDAIDYLKELLQRINDLHNELESTPTGS 367
SILGDAIDY+KELL +IN L + + + S
Sbjct: 183 TSILGDAIDYMKELLDKINKLQEDEQELGSNS 214
Score = 130 (50.8 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 412 RAVNIHM--FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVL 469
R VN H+ C +PGL++ST+ L++LGL+I+Q VISCF+ F+L E + V
Sbjct: 237 REVNTHIDICCPTKPGLVVSTVSTLETLGLEIEQCVISCFSDFSLQASCFEVGEQRYMVT 296
Query: 470 PKQIKSVLLDTAGF 483
+ K L+ AG+
Sbjct: 297 SEATKQALIRNAGY 310
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 81/189 (42%), Positives = 110/189 (58%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
+ K G P+KNLMAERRRRK+LNDRL MLRS+VPKISKMDR SILGD IDY+KEL +RI
Sbjct: 173 RSKLHGTPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIK 232
Query: 355 DLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAV 414
L E+ TP + + + E + R+ T + +V R
Sbjct: 233 TLEEEIGVTPE--------ELDLLNTMKDSSSGNNNEMLVRNST----KFDVENRGSGNT 280
Query: 415 NIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIK 474
I + C PG+LLST+ AL+ LGL+I+Q V+SCF+ F + ++ + Q V +IK
Sbjct: 281 RIEICCPANPGVLLSTVSALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQVVSTDEIK 340
Query: 475 SVLLDTAGF 483
L +AG+
Sbjct: 341 QTLFRSAGY 349
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 303 (111.7 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 80/201 (39%), Positives = 114/201 (56%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
K KG AKNLMAERRRRKKLNDRLY LRS+VP+I+K+DRASILGDAI+Y+KEL
Sbjct: 305 KKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAK 364
Query: 355 DLHNELES---TPTGSLM-QPSTSIQPMTPTP--PTLPCR-----VKEEISRSPTGEAAR 403
+L +ELE T GS Q S+ T P L C VK+++ + + +
Sbjct: 365 ELQDELEENSETEDGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQ 424
Query: 404 -----VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFR 458
V+V +GR + + C +PG M ALDSLGL++ A + + +VF+
Sbjct: 425 EMEPQVDVAQLDGREFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFK 484
Query: 459 AEQCREGQDVLPKQIKSVLLD 479
E+ + + V + +++ LL+
Sbjct: 485 VEK-NDNEMVQAEHVRNSLLE 504
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 203 (76.5 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 292 GDNKGKRKGLP---AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKE 348
GD +G+ G KNL AER+RRKKLN LY LRS+VP I+KMDRASILGDAIDY+
Sbjct: 270 GDGEGRSGGAKRQQCKNLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVG 329
Query: 349 LLQRINDLHNELE 361
L +++ +L +ELE
Sbjct: 330 LQKQVKELQDELE 342
Score = 79 (32.9 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 27/129 (20%), Positives = 57/129 (44%)
Query: 356 LHNELESTPTGSLMQPSTSIQPMTPTPPTL-PCRVKEEISRSPTGE---AARVEVRIREG 411
L N+ S P QP ++ + P +++ G ++EVR +G
Sbjct: 366 LDNDDASPPNSHQQQPPLAVSGSSSRRSNKDPAMTDDKVGGGGGGGHRMEPQLEVRQVQG 425
Query: 412 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQ-DVLP 470
+ + + +PG + M A+++LGL++ ++ + L+VFR R+ + V
Sbjct: 426 NELFVQVLWEHKPGGFVRLMDAMNALGLEVINVNVTTYKTLVLNVFRV-MVRDSEVAVQA 484
Query: 471 KQIKSVLLD 479
+++ LL+
Sbjct: 485 DRVRDSLLE 493
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 199 (75.1 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 46/153 (30%), Positives = 79/153 (51%)
Query: 304 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 363
++++AER+RR+KL+ R L +VP + KMD+AS+LGDAI Y+K+L ++ L E
Sbjct: 181 EHILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRR 240
Query: 364 PTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARR 423
P + + S Q C + + G +E R+ E R V + + C R
Sbjct: 241 PVEAAVLVKKS-QLSADDDDGSSCDENFDGGEATAG-LPEIEARVSE-RTVLVKIHCENR 297
Query: 424 PGLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
G L++ + ++++GL I + F +LD+
Sbjct: 298 KGALITALSEVETIGLTIMNTNVLPFTSSSLDI 330
Score = 44 (20.5 bits), Expect = 4.5e-14, Sum P(2) = 4.5e-14
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 62 TDWFLNSTLNNPPQDFT-NTTGLLETHQELRAFNAF 96
T WF N ++ P + GLLE + E + AF
Sbjct: 3 TQWFSNMVMDEPSFFHQWQSDGLLEQYTEQQIAVAF 38
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 187 (70.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 54/179 (30%), Positives = 86/179 (48%)
Query: 299 KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 358
K +KNL AERRRR +LN ++ LR+VVPKI+KM + + L DAI+++K L + +L
Sbjct: 60 KEFKSKNLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNEVLELQR 119
Query: 359 ELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHM 418
+L +P G + S PT + ++ G + N+ +
Sbjct: 120 QLGDSP-GEAWEKQGSASCSESFVPTENAHYQGQVELISLGSSK-----------YNLKI 167
Query: 419 FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVL 477
F +R GL + AL S + + F G+A F E E QDV+ +++S+L
Sbjct: 168 FWTKRAGLFTKVLEALCSYKVQVLSLNTISFYGYAESFFTIEVKGE-QDVVMVELRSLL 225
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 195 (73.7 bits), Expect = 3.7e-13, P = 3.7e-13
Identities = 55/178 (30%), Positives = 94/178 (52%)
Query: 274 GKVDESVKNWNAGGSATVGDNKGKRKGLP--AKNLMAERRRRKKLNDRLYMLRSVVPKIS 331
G+ DE N SAT +N G RK ++ L++ERRRR ++ D+LY LRS+VP I+
Sbjct: 99 GEEDEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNIT 158
Query: 332 KMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTP-TPPTLPCRVK 390
KMD+ASI+GDA+ Y++EL + L +++ + + Q P T P R
Sbjct: 159 KMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEAS--LNSTGGYQEHAPDAQKTQPFR-- 214
Query: 391 EEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSL-GLDIQQAVIS 447
I+ + + +++V E + + + C + G+ S ++L+SL +Q + +S
Sbjct: 215 -GINPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLS 271
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 49/146 (33%), Positives = 83/146 (56%)
Query: 297 KRKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
K K PA ++ AE++RR+KLN R Y LR++VPK+S+MD+AS+L DA+ Y++ L +I+
Sbjct: 240 KEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKID 299
Query: 355 DLHNELES---TPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRI-RE 410
DL E++ T T L S++ +P ++ +V ++ S+S G V+V+I E
Sbjct: 300 DLETEIKKMKMTETDKLDNSSSNT-----SPSSVEYQVNQKPSKSNRGSDLEVQVKIVGE 354
Query: 411 GRAVNIHMFCARRP-GLLLSTMRALD 435
+ + P L+S + +D
Sbjct: 355 EAIIRVQTENVNHPTSALMSALMEMD 380
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 169 (64.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 60/192 (31%), Positives = 96/192 (50%)
Query: 291 VGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELL 350
V K + + + NL AERRRR+KL+ RL LRS VP ++ M +ASI+ DAI Y+ EL
Sbjct: 19 VTKEKEEDENFKSPNLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQ 78
Query: 351 QRINDL---HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVR 407
+ +L +E+E P + + T PM P + EE+ + E ++ +
Sbjct: 79 NNVKNLLETFHEMEEAPP-EIDEEQTD--PMIK-PEVETSDLNEEMKKLGIEENVQL-CK 133
Query: 408 IREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQD 467
I E R + + +R G+ M + LG +I ++ NG A+ + + Q +E D
Sbjct: 134 IGE-RKFWLKIITEKRDGIFTKFMEVMRFLGFEIIDISLTTSNG-AILISASVQTQELCD 191
Query: 468 VLPKQIKSVLLD 479
V +Q K LL+
Sbjct: 192 V--EQTKDFLLE 201
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 189 (71.6 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 52/154 (33%), Positives = 78/154 (50%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 413 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKE 472
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIRE---GRAVNIHM 418
+ + + R KE S + A+ +E+ I G V I +
Sbjct: 473 E-----IQKKLDGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRV 527
Query: 419 FCARR--PGLLLSTMRALDSLGLDIQQAVISCFN 450
C ++ PG M AL L L++ A +S N
Sbjct: 528 QCGKKDHPGARF--MEALKELDLEVNHASLSVVN 559
Score = 45 (20.9 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 54 SGFKSILDTDWFLNSTLNNPPQDFTNTTGL 83
S + + DT+WF L + Q F N GL
Sbjct: 139 SNDEEVTDTEWFF---LVSMTQSFVNGVGL 165
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 52/174 (29%), Positives = 87/174 (50%)
Query: 279 SVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASI 338
+VK GGS++ G +++AERRRR+K+N R L +V+P + KMD+A+I
Sbjct: 146 AVKKGGGGGSSS----SAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATI 201
Query: 339 LGDAIDYLKELLQRINDLHNELES-TPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSP 397
LGDA+ Y+KEL +++ L E P +++ S+ C ++ +
Sbjct: 202 LGDAVKYVKELQEKVKTLEEEDGGGRPAAMVVRKSS-------------CSGRQSAAGDG 248
Query: 398 TGEAA--RVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCF 449
GE +EVR+ E R+V + + C GLL+ + ++ L L I + F
Sbjct: 249 DGEGRVPEIEVRVWE-RSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPF 301
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 182 (69.1 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 57/185 (30%), Positives = 88/185 (47%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ ++ E
Sbjct: 414 PLNHVEAERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKE 473
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKE-EISRSPTGEAARVEVRIRE-GRAVNIHMF 419
+Q + M VK+ + + +EV ++ G I +
Sbjct: 474 E------LQKQIDV--MNKEAGNAKSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQ 525
Query: 420 CARR--PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVL 477
C++R PG M AL L L++ A +S N + +A Q Q+K L
Sbjct: 526 CSKRNHPGAKF--MEALKELDLEVNHASLSVVNDLMIQ--QATVKMGNQFFTQDQLKVAL 581
Query: 478 LDTAG 482
+ G
Sbjct: 582 TEKVG 586
Score = 47 (21.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 54 SGFKSILDTDWFLNSTLNNPPQDFTNTTGL 83
+G + + DT+WF L + Q F TGL
Sbjct: 154 AGDEEVTDTEWFF---LVSMTQSFVKGTGL 180
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 178 (67.7 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 43/145 (29%), Positives = 75/145 (51%)
Query: 282 NWN-AGGSATVGDNKGKRKGLPA-----KNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
+W+ + S V ++ G G A ++++AER+RR+K+N R L +V+PK+ KMD+
Sbjct: 102 SWDFSAASVAVQEDLGAHGGAAAAYAQLEHVVAERKRREKINQRFMELSAVIPKLKKMDK 161
Query: 336 ASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMT--PTPPTLPCRVKEEI 393
A+IL DA Y++EL +++ L + + T + M + + M P PP + E+
Sbjct: 162 ATILSDAASYIRELQEKLKALEEQAAARVTEAAMATPSPARAMNHLPVPPEI------EV 215
Query: 394 SRSPTGEAARVEVRIREGRAVNIHM 418
SPT V + G V + +
Sbjct: 216 RCSPTNNVVMVRIHCENGEGVIVRI 240
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 174 (66.3 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 303 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLH---NE 359
+KN+++ER RR+KLN RL+ LRSVVP ISK+D+AS++ D+IDY++EL+ + L E
Sbjct: 53 SKNVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRE 112
Query: 360 LESTPTGSLMQP---------STSIQPMTPTPPTLPCRVKE-----EISRSPTGEAARVE 405
LES T L P T +Q + + K+ + P E ++
Sbjct: 113 LESRST-LLENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPI-EVLEMK 170
Query: 406 VRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCF 449
V + V + + C+++ ++ + L+SL L+I S F
Sbjct: 171 VTWMGEKTVVVCITCSKKRETMVQLCKVLESLNLNILTTNFSSF 214
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 185 (70.2 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 51/146 (34%), Positives = 73/146 (50%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ L + E
Sbjct: 522 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELRGKLTALETDKE 581
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCA 421
+ L S++ P P + A +E +I G I + C
Sbjct: 582 T-----LQSQMESLKKERDARPPAPSGGGGD--GGARCHAVEIEAKIL-GLEAMIRVQCH 633
Query: 422 RRPGLLLSTMRALDSLGLDIQQAVIS 447
+R M AL L LD+ A +S
Sbjct: 634 KRNHPAARLMTALRELDLDVYHASVS 659
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 183 (69.5 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 361
P ++ AER+RR+KLN R Y LRSVVP ISKMD+AS+LGDAI Y+KEL +++ + +E
Sbjct: 393 PLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDERV 452
Query: 362 STPTGSLMQPST 373
T SL + +T
Sbjct: 453 GTDK-SLSESNT 463
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 182 (69.1 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 58/183 (31%), Positives = 88/183 (48%)
Query: 278 ESVKNWNAGGSATVGDNKGKRKGL--------PAKNLMAERRRRKKLNDRLYMLRSVVPK 329
+ ++N + + KGK++G P ++ AER RR+KLN R Y LR+VVP
Sbjct: 309 DQIQNVVPHATVMLEKKKGKKRGRKPAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPN 368
Query: 330 ISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRV 389
+SKMD+ S+L DA+ Y+ EL + ++ ELE I P++ C+
Sbjct: 369 VSKMDKTSLLEDAVCYINELKSKAENV--ELEKHAIEIQFNELKEIAGQRNAIPSV-CKY 425
Query: 390 KEEISRSPTGEAARVEVRIREG--RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVIS 447
+E+ S E ++EV+I E V + PG L M AL L L++ A IS
Sbjct: 426 EEKAS-----EMMKIEVKIMESDDAMVRVESRKDHHPGARL--MNALMDLELEVNHASIS 478
Query: 448 CFN 450
N
Sbjct: 479 VMN 481
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 164 (62.8 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/85 (45%), Positives = 52/85 (61%)
Query: 286 GGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDY 345
GG GD+ G KN++ ER RR+KLN++LY LRSVVP I+KMD+ASI+ DAI+Y
Sbjct: 79 GGGGGGGDDAGGAN----KNILMERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEY 134
Query: 346 LKELLQRINDLHNE---LESTPTGS 367
++ L + E LES S
Sbjct: 135 IQRLQAEEQQMLREVAALESAAAAS 159
Score = 48 (22.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 405 EVRIRE-G-RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
E+R+ E G R + + + C++R + RAL+ L L + A I+ G
Sbjct: 221 ELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAG 269
>UNIPROTKB|Q5Z988 [details] [associations]
symbol:P0548E04.5 "Os06g0724800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 eggNOG:NOG245311
EMBL:AP003685 EMBL:AP007231 EMBL:AK063523 RefSeq:NP_001175006.1
UniGene:Os.11409 EnsemblPlants:LOC_Os06g50900.1 GeneID:9271931
KEGG:osa:9271931 Uniprot:Q5Z988
Length = 213
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 34/49 (69%), Positives = 41/49 (83%)
Query: 288 SATVGDNKGKR-KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
+A +K KR +G+P+KNLMAERRRRK+LNDRL MLRSVVPKISK+ R
Sbjct: 138 AAAAPASKKKRVEGMPSKNLMAERRRRKRLNDRLSMLRSVVPKISKVYR 186
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 160 (61.4 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 39/105 (37%), Positives = 68/105 (64%)
Query: 303 AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 362
+KN+ ER RRK+LN++L+ LR+VVPKI+KMD+ASI+ DAI ++++L + L +E+
Sbjct: 96 SKNIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQEEERQLLDEISV 155
Query: 363 TPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPT---GEAARV 404
+ + + +T+++ + + T+P +K+ S P G A RV
Sbjct: 156 LQSAAAVA-ATAVEDVDDSGVTMPS-MKKLRSTPPLDGGGGALRV 198
Score = 49 (22.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 412 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
+ V + + CA+ G + A++SL L + A ++ +G
Sbjct: 242 KTVAVSIRCAKTRGAMAKVCHAVESLYLKVVSASVAAVDG 281
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 161 (61.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 35/69 (50%), Positives = 50/69 (72%)
Query: 293 DNKGKRKGLPAKNL---MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 349
DN K K LP ++L +AERRRR+KLN++ LRS+VP ++KMD+ SILGD I Y+ L
Sbjct: 350 DNT-KDKRLPREDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHL 408
Query: 350 LQRINDLHN 358
+R+++L N
Sbjct: 409 RKRVHELEN 417
Score = 59 (25.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 404 VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLD 440
VEV I E + + M C R GLLL ++ L LG++
Sbjct: 438 VEVSIIENDVL-LEMRCEYRDGLLLDILQVLHELGIE 473
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 171 (65.3 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 364
+++AER+RR+KL R L +++P + KMD+AS+LGDAI ++K L + + + + +
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEKT 186
Query: 365 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 424
S++ S + + S + +EVR+ G+ V I + C ++
Sbjct: 187 MESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRV-SGKDVLIKILCEKQK 245
Query: 425 GLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
G ++ M ++ LGL I + + F G D+
Sbjct: 246 GNVIKIMGEIEKLGLSITNSNVLPF-GPTFDI 276
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 172 (65.6 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 40/88 (45%), Positives = 58/88 (65%)
Query: 283 W-NAGGSATVGDNKGKRKGL-PAK-------NLMAERRRRKKLNDRLYMLRSVVPKISKM 333
W +A G+ G+N+ +++G PA ++ AER+RR+KLN R Y LRSVVP ISKM
Sbjct: 403 WADAVGADESGNNRPRKRGRRPANGRAEALNHVEAERQRREKLNQRFYALRSVVPNISKM 462
Query: 334 DRASILGDAIDYLKELLQRINDLHNELE 361
D+AS+LGDA+ Y+ EL ++ + E E
Sbjct: 463 DKASLLGDAVSYINELHAKLKVMEAERE 490
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 172 (65.6 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 51/157 (32%), Positives = 79/157 (50%)
Query: 307 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 366
++E++RR+KLN+R LRS++P ISK+D+ SIL D I+YL++L +R+ +L + ES T
Sbjct: 408 LSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESCRESADTE 467
Query: 367 SLMQPSTSIQPMTPTP-PTLPC-RVKEEISRSPTGEAARVEV---------RIRE-GRAV 414
+ + +P + C K + S GE ++ RI G V
Sbjct: 468 TRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRISSLGNEV 527
Query: 415 NIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
I + CA R G+LL M + L LD S +G
Sbjct: 528 VIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDG 564
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 41/162 (25%), Positives = 81/162 (50%)
Query: 296 GKRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
G R + AK +++AER+RR+KL+++ L +++P + K D+ +IL DAI +K+L +++
Sbjct: 110 GTRSPVLAKEHVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLR 169
Query: 355 DLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAV 414
L E E+T M + P L C I +E +I + +
Sbjct: 170 TLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQA--LPEIEAKISQNDIL 227
Query: 415 NIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
I + C + G +++ + +++ L I+ +++ F LD+
Sbjct: 228 -IRILCEKSKGCMINILNTIENFQLRIENSIVLPFGDSTLDI 268
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 55/176 (31%), Positives = 85/176 (48%)
Query: 284 NAGGSATVGDNKGKRKGLPAKN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 342
NA GSA +G KN +M+ERRRR+KL + +L+SVVP I K+D+ASIL +
Sbjct: 226 NADGSAATMTTD---QGSSIKNHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAET 282
Query: 343 IDYLKELLQRINDLHNELESTPTGSLMQPSTS-IQPMTPTPPTLPCRVKEEIS--RSPTG 399
I YLKEL +R+ +L E S P+ M+ + T + R K + G
Sbjct: 283 IAYLKELEKRVEEL--ESSSQPSPRPMETTRRRCCKSTGKKVSAGARAKRKAPAPEDTDG 340
Query: 400 E----AARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
E + V V I + + + + + C + L+ A+ + LD+ S +G
Sbjct: 341 ERRHCVSNVNVTIMDNKELLLELQCQWKELLMTRVFDAIKGVSLDVLSVQASTSDG 396
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 56/186 (30%), Positives = 90/186 (48%)
Query: 304 KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELES 362
KN +M+ERRRR+KLN+ +L+S+VP I K+D+ASIL + I YLKEL +R+ +L + +
Sbjct: 187 KNHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKKV 246
Query: 363 TPTGSLMQPSTSIQPMTPTPPTLPCRVKEE----ISRSPTGEAARVEVRIREGRAVNIHM 418
+ S +I VKE +S S G + V V + + +++ +
Sbjct: 247 SRPAKRKPCSETIIGGGGGGGGAGA-VKEHHHWVLSESQEGTPSDVRVIVMDKDELHLEV 305
Query: 419 FCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQCREGQDVLPKQIKSVLL 478
C + ++ A+ SL LD+ S +G RA+ V+P I L
Sbjct: 306 QCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLLGLKIRAKYASSAA-VVPAMISETLR 364
Query: 479 DT-AGF 483
AG+
Sbjct: 365 TAVAGY 370
>TAIR|locus:2009537 [details] [associations]
symbol:AT1G22490 "AT1G22490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006551
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AY088234 EMBL:AF488622 IPI:IPI00545534 PIR:B86358
RefSeq:NP_564171.1 UniGene:At.19247 ProteinModelPortal:Q9SK91
SMR:Q9SK91 EnsemblPlants:AT1G22490.1 GeneID:838855
KEGG:ath:AT1G22490 TAIR:At1g22490 eggNOG:NOG281753
InParanoid:Q8L9T3 OMA:ESHANIK PhylomeDB:Q9SK91
ProtClustDB:CLSN2679534 Genevestigator:Q9SK91 Uniprot:Q9SK91
Length = 304
Score = 159 (61.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 46/154 (29%), Positives = 79/154 (51%)
Query: 294 NKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQ 351
NK + + ++ ER RRK++N+ L +LRS++P + D+ASI+G AI+Y+KEL
Sbjct: 106 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELEH 165
Query: 352 RINDLHNELEST--PTGSLMQPSTSIQPMTP--TPPTLPCRVKEEISRSPTGEAARVEVR 407
+ + + T P G S+ + P T + P + ++ S + A +EV
Sbjct: 166 ILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDVPES-SSSPAEIEVT 224
Query: 408 IREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 441
+ E A NI + ++P LL + +L SL L +
Sbjct: 225 VAESHA-NIKIMTKKKPRQLLKLITSLQSLRLTL 257
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 155 (59.6 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 32/73 (43%), Positives = 45/73 (61%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G G P ++ AER+RR+KLN R LR+ VP +S+MD+AS+L DA+DY+ EL +
Sbjct: 82 GPRSGGGGAPPIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRR 141
Query: 352 RINDLHNELESTP 364
R+ L E P
Sbjct: 142 RVERLEAEARRAP 154
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 162 (62.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 67/208 (32%), Positives = 99/208 (47%)
Query: 289 ATVGDNKGKRKGLPA----KN-LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 343
A + +G R L KN +++ERRRR+KLN+ +L+S+VP I K+D+ASIL + I
Sbjct: 372 ARMSTGRGSRAALTQESGIKNHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETI 431
Query: 344 DYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRV--KE---EISRSPT 398
YLK L +R+ ELES+ +PS Q T T C + KE EI S
Sbjct: 432 AYLKVLEKRVK----ELESSS-----EPSH--QRATETGQQRRCEITGKELVSEIGVSGG 480
Query: 399 GEAAR----VEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
G+A R V V + + + V + + C + ++ A+ SL LD+ S +G
Sbjct: 481 GDAGREHHHVNVTVTD-KVVLLEVQCRWKELVMTRVFDAIKSLCLDVLSVQASAPDGLLG 539
Query: 455 DVFRAEQCREGQDVLPKQIKSVLLDTAG 482
+A+ G V P I L G
Sbjct: 540 LKIQAKFACSGS-VAPGMISEALQKAIG 566
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 293 DNKGKRKGLP-----AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLK 347
D+K +K LP +KNL +ER+RR+++N +Y LR+VVPKI+K+++ I DA+DY+
Sbjct: 248 DSKANKKLLPTENFKSKNLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYIN 307
Query: 348 ELLQRINDLHNELE 361
ELL L +EL+
Sbjct: 308 ELLVEKQKLEDELK 321
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 302 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNE 359
P ++ AER+RR+KLN R Y LR+VVP +SKMD+AS+LGDAI Y+ EL ++ +E
Sbjct: 450 PLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESE 507
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 156 (60.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 43/152 (28%), Positives = 78/152 (51%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 364
+++AER+RR+KL R L ++VP + KMD+AS+LGDA+ ++K L +R+ +L + +
Sbjct: 153 HIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKERR 212
Query: 365 TGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRP 424
S++ S + + ++ S E +EVR + V I + C ++
Sbjct: 213 LESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPE---IEVRFSD-EDVLIKILCEKQK 268
Query: 425 GLLLSTMRALDSLGLDIQQAVISCFNGFALDV 456
G L M ++ L + I + + F G LD+
Sbjct: 269 GHLAKIMAEIEKLHILITNSSVLNF-GPTLDI 299
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 150 (57.9 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 28/57 (49%), Positives = 43/57 (75%)
Query: 309 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPT 365
E++RR+KLN+R LR ++P I+K+D+ SIL D I+YL+EL +R+ +L + EST T
Sbjct: 446 EKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESCRESTDT 502
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 23/70 (32%), Positives = 30/70 (42%)
Query: 411 GRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGF-ALDVFRAEQCR-EGQDV 468
G V I + CA R G+LL M + L LD S +G L V C+ +G +
Sbjct: 565 GNEVVIELRCAWREGVLLEIMDVISDLHLDSHSVQSSTGDGLLCLTV----NCKHKGSKI 620
Query: 469 L-PKQIKSVL 477
P IK L
Sbjct: 621 ATPGMIKEAL 630
Score = 37 (18.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 40 EPKEDEMHVNAVSLSGFKS 58
+P+ D++H +V + FK+
Sbjct: 351 DPRNDDVHYQSVISTIFKT 369
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/179 (26%), Positives = 84/179 (46%)
Query: 279 SVKNWNAGGSATVGDNKGKRKGLP--AKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
S + A G G P ++++AER+RR+K+N R L +V+P + KMD+A
Sbjct: 165 SAQTRRASSKGNGGGGSGSSSAAPYAQEHIIAERKRREKINQRFIELSTVIPGLKKMDKA 224
Query: 337 SILGDAIDYLKELLQRINDLHNELESTPTGSLM--QPSTSIQPMTPTPPTLPCRVKEEIS 394
+IL DA+ Y+KE+ +++++L +++ +P + P V S
Sbjct: 225 TILSDAVRYVKEMQEKLSELEQHQNGGVESAILLKKPCIATSSSDGGCPAASSAVAGS-S 283
Query: 395 RSPTGEAA--RVEVRIREGRA-VNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFN 450
S T ++ +E +I G V IH + G L+ + A++ L L I + F+
Sbjct: 284 SSGTARSSLPEIEAKISHGNVMVRIHGENNGK-GSLVRLLAAVEGLHLGITHTNVMPFS 341
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 157 (60.3 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 49/188 (26%), Positives = 83/188 (44%)
Query: 276 VDESVKNWNAGGSATVGDNKGKRKGLPAKN----LMAERRRRKKLNDRLYMLRSVVPKIS 331
+D S + W V +R+ P N ++AER+RR+KL + L ++VP +
Sbjct: 255 LDFSGRGWQQDDGVGVFQQPPERRSRPPANAQEHVIAERKRREKLQQQFVALATIVPGLK 314
Query: 332 KMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQP---MTPTPPTLPCR 388
K D+ S+LG IDY+K+L +++ L T +P+T+ + +T
Sbjct: 315 KTDKISLLGSTIDYVKQLEEKVKALEEGSRRTA-----EPTTAFESKCRITVDDDDGGSA 369
Query: 389 VKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISC 448
S + + VE I G V + + C R GLL+ + L+ GL I +
Sbjct: 370 SSGTDDGSSSSSSPTVEASIH-GNTVLLKICCKERRGLLVMILSELEKQGLSIINTSVVP 428
Query: 449 FNGFALDV 456
F L++
Sbjct: 429 FTDSCLNI 436
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 134 (52.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 36/116 (31%), Positives = 62/116 (53%)
Query: 277 DESVKNWNAGGSATVGDNK--GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVP--KISK 332
+E + + G A DNK G++K ++ ER RRK++N+ L +LRS++P + +
Sbjct: 78 EEDEEEEDGDGEAEE-DNKQDGQQK---MSHVTVERNRRKQMNEHLTVLRSLMPCFYVKR 133
Query: 333 MDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCR 388
D+ASI+G ++Y+ EL Q + L + + ++ P P P+PP L R
Sbjct: 134 GDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPR-PSPPVLSPR 188
Score = 63 (27.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 389 VKEEISRSPTGEAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISC 448
+ E ++ S + A VEV+ G V + + PG ++ + AL+ L L+I Q I+
Sbjct: 274 INELVANSKSA-LADVEVKF-SGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINT 331
Query: 449 FNGFALDVFRAE---QCREGQDVLPKQIK 474
+ L+ F + +C+ + L +QI+
Sbjct: 332 VDETMLNSFTIKIGIECQLSAEELAQQIQ 360
>TAIR|locus:2042486 [details] [associations]
symbol:AT2G31220 "AT2G31220" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT005711 EMBL:BT008608 EMBL:AK228592
EMBL:AF251695 IPI:IPI00521500 PIR:A84718 RefSeq:NP_180680.2
UniGene:At.28314 ProteinModelPortal:Q84TK1 SMR:Q84TK1
EnsemblPlants:AT2G31220.1 GeneID:817679 KEGG:ath:AT2G31220
TAIR:At2g31220 eggNOG:NOG254981 HOGENOM:HOG000083787
InParanoid:Q84TK1 OMA:NTKICEG PhylomeDB:Q84TK1
ProtClustDB:CLSN2716481 Genevestigator:Q84TK1 Uniprot:Q84TK1
Length = 458
Score = 143 (55.4 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 36/94 (38%), Positives = 53/94 (56%)
Query: 278 ESVKNWNAGGSATVGD-NKG-KRKGLPAKNLMA---ERRRRKKLNDRLYMLRSVVPKISK 332
E N N G + + N G RKG ++ ER RR NDR + L++++P +K
Sbjct: 216 EGANNNNGGFENEILEFNNGVTRKGRGSRKSRTSPTERERRVHFNDRFFDLKNLIPNPTK 275
Query: 333 MDRASILGDAIDYLKELLQRINDLHNELESTPTG 366
+DRASI+G+AIDY+KELL+ I + +E G
Sbjct: 276 IDRASIVGEAIDYIKELLRTIEEFKMLVEKKRCG 309
Score = 56 (24.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 400 EAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRA 459
+ V+VRI + V I + ++ LL T + LD L LD+ +F
Sbjct: 366 KVTEVDVRIIDDE-VTIKLVQKKKINCLLFTTKVLDQLQLDLHHVAGGQIGEHYSFLFNT 424
Query: 460 EQCREGQDVLPKQIKSVLLD 479
+ C EG V I L++
Sbjct: 425 KIC-EGSCVYASGIADTLME 443
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 150 (57.9 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 293 DNKGKRKG-LPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
+N G+R+ L ++++AER+RR+KLN+RL L +++P + K D+A++L DAI +LK+L +
Sbjct: 120 NNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQE 179
Query: 352 RINDLHNELESTPTGS----LMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAA----- 402
R+ L E T L++ S + + C +S S + E +
Sbjct: 180 RVKKLEEERVVTKKMDQSIILVKRSQVYLDDDSSSYSSTCSAASPLSSS-SDEVSIFKQT 238
Query: 403 --RVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 441
+E R+ + R + I + C + G ++ + +L+ L++
Sbjct: 239 MPMIEARVSD-RDLLIRVHCEKNKGCMIKILSSLEKFRLEV 278
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 296 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 355
G+ + L ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+L DAI Y+ ++ ++I
Sbjct: 314 GREEAL--NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKIRV 371
Query: 356 LHNE 359
E
Sbjct: 372 YETE 375
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 112 (44.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL 356
++ ER RR+++N+ L +LRS++P+ + + D+ASI+G AI+++KEL Q++ L
Sbjct: 92 HIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSL 145
Score = 80 (33.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 357 HNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI 416
H+ +ST T + S S + +P T+ ++ E RS G A +EV + E A ++
Sbjct: 218 HSPRDSTTTTTAASASASASASSSSPATVAAALQSE-HRS--G-LADIEVSLVETHA-SV 272
Query: 417 HMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
+ RRPG LL + L +L L + ++ + L
Sbjct: 273 RVMSPRRPGQLLKMIAGLQALRLTVLHLNVTTLDSLVL 310
>UNIPROTKB|Q8LII5 [details] [associations]
symbol:OJ1167_G06.116 "Putative uncharacterized protein
OJ1167_G06.116" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 EMBL:AP003817 EMBL:AK242001
EnsemblPlants:LOC_Os07g47960.1 OMA:HAESETS Uniprot:Q8LII5
Length = 157
Score = 93 (37.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 309 ERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGSL 368
ER++ L+++L +LRS+ + + SI+ DA +Y+KEL Q++ L+ E+ +L
Sbjct: 5 ERKKAAALHEKLQILRSITHSHA-LSNTSIITDASEYIKELKQKVVRLNKEIACAEAAAL 63
Query: 369 MQPS 372
Q S
Sbjct: 64 RQNS 67
Score = 83 (34.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 411 GRAVNIHMFCARR-PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE 460
G I++F + PGLL+S + A D LGL++ +A SC + F L+ E
Sbjct: 77 GHGFLINVFSDKSCPGLLVSILEAFDELGLNVLEATASCDDTFRLEAVGGE 127
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 139 (54.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 35/106 (33%), Positives = 56/106 (52%)
Query: 288 SATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDY 345
+A VGD G K ++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY
Sbjct: 120 AAAVGDGDGAAK---MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDY 176
Query: 346 LKELLQRINDLHNELESTPTGSLM-----QPSTSIQPMTPTPPTLP 386
+KEL Q + L + + P+ + + PTPP P
Sbjct: 177 IKELQQVLRSLEAKKNRKAYADQVLSPRPSPAAAALMVKPTPPISP 222
Score = 48 (22.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 422 RRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE---QCREGQDVLPKQIKSVLL 478
R PG L + AL+SL L+I I + + F + +C + L ++I+ L
Sbjct: 356 RAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKIGIECELSAEELVQEIQQTFL 415
>UNIPROTKB|Q7XLY9 [details] [associations]
symbol:OSJNBa0086O06.20 "OSJNBa0086O06.20 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL662981 UniGene:Os.52382 HOGENOM:HOG000238962
ProteinModelPortal:Q7XLY9 EnsemblPlants:LOC_Os04g50090.1
Gramene:Q7XLY9 OMA:RFFTYPQ Uniprot:Q7XLY9
Length = 362
Score = 118 (46.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 362
++ ER RR+++N+ L +LRS++P+ + + D+ASI+G AID++KEL Q L LE+
Sbjct: 97 HIAVERNRRRQMNEYLAVLRSLMPESYVHRGDQASIVGGAIDFVKELEQ----LLQSLEA 152
Query: 363 TPTGSLMQP 371
LMQP
Sbjct: 153 QKRTLLMQP 161
Score = 67 (28.6 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 402 ARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFAL 454
A +EV + E A +I + ARRPG LL + L +L L + ++ AL
Sbjct: 235 ADIEVSLVETHA-SIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLAL 286
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 47/183 (25%), Positives = 87/183 (47%)
Query: 294 NKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQ 351
NK + + ++ ER RR+++N+ L LRS++P + + D+ASI+G AID++KEL Q
Sbjct: 106 NKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQ 165
Query: 352 RINDLHNE-----LESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEIS-RSPTGEAARVE 405
+ L E + TP + S+S+ + ++ + + R G+ VE
Sbjct: 166 LLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTARFGGGDTTEVE 225
Query: 406 VRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQ---C 462
+ + V++ + C R +L + +++ L L I IS F + F + C
Sbjct: 226 ATVIQNH-VSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMEDGC 284
Query: 463 REG 465
+ G
Sbjct: 285 KLG 287
>TAIR|locus:2207061 [details] [associations]
symbol:AT1G72210 "AT1G72210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005634 GO:GO:0009536
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC067754 HOGENOM:HOG000238962 eggNOG:NOG281753
ProtClustDB:CLSN2679534 EMBL:AJ459771 EMBL:BT003871 EMBL:BT006086
IPI:IPI00538709 PIR:F96745 RefSeq:NP_177366.1 UniGene:At.35130
ProteinModelPortal:Q9C7T4 SMR:Q9C7T4 EnsemblPlants:AT1G72210.1
GeneID:843553 KEGG:ath:AT1G72210 TAIR:At1g72210 InParanoid:Q9C7T4
OMA:PQDPFSY PhylomeDB:Q9C7T4 Genevestigator:Q9C7T4 Uniprot:Q9C7T4
Length = 320
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 45/156 (28%), Positives = 74/156 (47%)
Query: 294 NKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKI--SKMDRASILGDAIDYLKELLQ 351
NK + + ++ ER RRK++N+ L +LRS++P + D+ASI+G AI+YLKEL
Sbjct: 116 NKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAINYLKELEH 175
Query: 352 RINDLHNEL----ESTPTGSLMQPSTSIQPMTPTPP--TLPCRVKEEISRSPTGEAARVE 405
+ + + E T G +TS P P S + A +E
Sbjct: 176 HLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPTSAAAAEGMAEIE 235
Query: 406 VRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 441
V + E A ++ + +RP LL + ++ SL L +
Sbjct: 236 VTMVESHA-SLKILAKKRPRQLLKLVSSIQSLRLTL 270
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 292 GDNKGKRKGLPA-KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELL 350
G G R P ++ AER+RR+KLN R LR+ VP +S+MD+AS+L DA Y+ EL
Sbjct: 98 GRKPGPRPDGPTVSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELR 157
Query: 351 QRINDLHNELESTPTGSLMQPST 373
R+ L ++ + +PS+
Sbjct: 158 ARVARLESDARQA-AAARFEPSS 179
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 112 (44.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 274 GKVDESVKNWNAGGSATVGDNKG-----KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVP 328
G+ D + K + TV N+ K + +K+ + E+RRR K+N+R +LR ++P
Sbjct: 14 GEEDFNSKREGPSSNTTVHSNRDSKENDKASAIRSKHSVTEQRRRSKINERFQILRELIP 73
Query: 329 KIS-KMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQP 377
K D AS L + IDY++ L +++ + E + G +P T + P
Sbjct: 74 NSEQKRDTASFLLEVIDYVQYLQEKVQ----KYEGSYPGWSQEP-TKLTP 118
Score = 65 (27.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 370 QPSTSIQPMTPTPPTLPCRVKEEISRSP-TGEA-ARVEVRIREGRAVNIHMFCARRPGLL 427
QP + + P P LP E+ + P T + + + EG ++I + LL
Sbjct: 185 QPELDDKGLPPLQPILPMVQGEQANECPATSDGLGQSNDLVIEGGTISISSAYSHE--LL 242
Query: 428 LSTMRALDSLGLDIQQAVIS 447
S +AL + G+D+ QA +S
Sbjct: 243 SSLTQALQNAGIDLSQAKLS 262
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 119 (46.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 297 KRKGLPA--KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
++ G PA + AER+RR+++N L LR++VP S+MD+A++LG+ + +++EL R +
Sbjct: 13 RKGGSPAVRSHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCRAD 72
Query: 355 D 355
D
Sbjct: 73 D 73
Score = 49 (22.3 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 412 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
R V + CA RPGL+ RA+ S+ +A ++ G
Sbjct: 117 RRVRAWVCCADRPGLMSDLGRAVRSVSARPVRAEVATVGG 156
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 25/54 (46%), Positives = 42/54 (77%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHN 358
++M+ERRRR+KLN+ +L+S++P + K+D+ASIL + I YLK L +R+ +L +
Sbjct: 379 HVMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITYLKVLEKRVKELES 432
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/111 (30%), Positives = 63/111 (56%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELE- 361
++ ER RRK++N+ L +LRS++P + + D+ASI+G +DY+KEL Q ++ L + +
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQR 198
Query: 362 STPTGSLMQP----STSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRI 408
T ++ P + + +P PP L R+ ++ +S + R+ V I
Sbjct: 199 KVYTDQVLSPRPPATVAASCCSPRPPQLSPRLPPQLLKSTPPLSPRLAVPI 249
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 135 (52.6 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
+GKRK P ER RR LN+R L+ ++P SK DRASIL D IDY+ EL +R++
Sbjct: 208 RGKRKNKP---FTTERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVS 264
Query: 355 DLHNELESTPTG 366
+L +E G
Sbjct: 265 ELKYLVERKRCG 276
Score = 43 (20.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 400 EAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDI 441
+ V+VRI + V I + ++ LL + LD L LD+
Sbjct: 336 KVTEVDVRIVDDE-VTIKVVQKKKINCLLLVSKVLDQLQLDL 376
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 133 (51.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL-LQ-R 352
+GKR + ++E+RRR ++N+++ L+S++P SK D+AS+L DAI+YLK+L LQ +
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQ 86
Query: 353 INDLHNELESTP 364
+ + N L P
Sbjct: 87 MLSMRNGLYLPP 98
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 135 (52.6 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 277 DESVKNWNAGGSATVGDNKGKRKGLPAK-NLMAERRRRKKLNDRLYMLRSVVPKISKMDR 335
DESV +A G+ + + R+ A+ + ++ERRRR ++N+R+ L+ ++P SK D+
Sbjct: 233 DESVSLSDAIGNKSNQRSGSNRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDK 292
Query: 336 ASILGDAIDYLKEL 349
ASIL +AIDYLK L
Sbjct: 293 ASILDEAIDYLKSL 306
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 134 (52.2 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G KR + +AERRRR+K+N+++ L+ ++P+ +K + S L DAI+Y+K L
Sbjct: 247 GSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQS 306
Query: 352 RINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLP 386
+I + + + + P ++ P PP +P
Sbjct: 307 QIQGMMSPMMNAGNTQQFMPHMAMDMNRP-PPFIP 340
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 133 (51.9 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 31/96 (32%), Positives = 59/96 (61%)
Query: 285 AGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAID 344
A G+ G + KR + ++E+RRR K+N+++ L+S++P +K D+AS+L +AI+
Sbjct: 88 AAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIE 147
Query: 345 YLKEL-LQ-RINDLHNELESTPT--GSLMQPSTSIQ 376
YLK+L LQ ++ + N + P+ ++P+ + Q
Sbjct: 148 YLKQLQLQVQMLSMRNGVYLNPSYLSGALEPAQASQ 183
Score = 37 (18.1 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 140 DLGGEAAGFIQPASG 154
D GGE GF +G
Sbjct: 66 DCGGELGGFCDSEAG 80
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 293 DNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQR 352
+ KG +K ++ + ER RR NDR + L++++P +K ASI+ D I Y+ EL +
Sbjct: 15 EGKGSKK---SRTFLTERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRL 71
Query: 353 INDLHNELESTPTGS 367
+++L +E G+
Sbjct: 72 VSELKYLVEKKKCGA 86
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 48/182 (26%), Positives = 89/182 (48%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELES 362
++ ER RR+++N L LRS++P I + D+ASI+G AID++K L Q++ L + S
Sbjct: 195 HIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQKRS 254
Query: 363 TPTGSLMQ--PS-TSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMF 419
+ + P S++ ++ L KEE S ++E + E VN+ +
Sbjct: 255 QQSDDNKEQIPEDNSLRNISSNK--LRASNKEEQSSK-----LKIEATVIESH-VNLKIQ 306
Query: 420 CARRPGLLLSTMRALDSLGLDIQQA-VISCFN---GFALDVFRAEQCREGQ-DVLPKQIK 474
C R+ G LL ++ L+ L + + S N ++ ++ ++C G D + I+
Sbjct: 307 CTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAAIR 366
Query: 475 SV 476
+
Sbjct: 367 QI 368
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNELE- 361
++ ER RR+++ND L +LRS+ P I + D+ASI+G AID++KEL + L + +
Sbjct: 3 HIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQKKR 62
Query: 362 -STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEA 401
P L+ P++ +P P S SPT A
Sbjct: 63 RQQPQAHLISPASISASGGGSPSPTPSPRSLITSCSPTAAA 103
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 277 DESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
DE K AGG ++V KR A + +ER+RR K+N R+ L+ +VP SK D+A
Sbjct: 195 DEEEKK--AGGKSSVST---KRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSKTDKA 249
Query: 337 SILGDAIDYLKELLQRINDLHN-ELESTPTGSLMQPSTSIQ 376
S+L + I+YLK+L +++ + + S MQ +Q
Sbjct: 250 SMLDEVIEYLKQLQAQVSMMSRMNMPSMMLPMAMQQQQQLQ 290
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/154 (29%), Positives = 74/154 (48%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN---------DLHN 358
AERRRR+++N L LRS++P +K D+AS+L + I+++KEL ++ D H
Sbjct: 113 AERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAGDYHG 172
Query: 359 ELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGR-AVNIH 417
E + + S + Q + PT +E++ +A EG+ V
Sbjct: 173 NDEDDDDAVVGRRSAAAQQLLPTEA-------DELAVDAAVDA--------EGKLVVRAS 217
Query: 418 MFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
+ C RP L+ RAL +L L ++A I+ G
Sbjct: 218 LCCEDRPDLIPDIARALAALRLRARRAEITTLGG 251
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 125 (49.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/101 (34%), Positives = 58/101 (57%)
Query: 289 ATVGDNKGKRKGLPAKN---LMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDY 345
ATV K KR+ + + +A R RR+++++R+ +L+ +VP +KMD AS+L +AI Y
Sbjct: 113 ATV--KKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRY 170
Query: 346 LKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLP 386
+K L ++I L+N TP Q S ++ +PP P
Sbjct: 171 VKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTSWVSPPPPP 211
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDLHNEL-E 361
++ ER RR+ +ND L LRS++P I + D+A+++G AIDY+K+L Q++ L E
Sbjct: 119 HIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAAAE 178
Query: 362 STPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNIHMFCA 421
+ G + +T+ P S + G VE G V + +
Sbjct: 179 RSGVGVVAAAATAASDGVFVSPQYT-----SYSEARGGSGVDVEATAAVGGHVRVRVAGR 233
Query: 422 RRPGLLLSTMRALDSLGLDI---------QQAVISCFN 450
R G L+ + A++ L L + AV+ CFN
Sbjct: 234 RWTGRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFN 271
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G KR + +AERRRR+K+N+R+ L+ ++P+ +K + S+L D I+Y+K L
Sbjct: 142 GSTSRKRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVSMLEDVIEYVKSLEM 201
Query: 352 RINDL--HNELE-STPTGSLMQPSTS----IQPMTPTPPTLP 386
+IN H + + P + PS + + P P PP P
Sbjct: 202 QINQFMPHMAMGMNQPPAYIPFPSQAHMAGVGPSYP-PPRYP 242
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 56/197 (28%), Positives = 89/197 (45%)
Query: 296 GKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIND 355
GK KG N ER RR++LN + LR + P +K DRASI+GDAI+Y+ EL + + +
Sbjct: 259 GKGKG--KANFATERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKE 316
Query: 356 LHNELESTPTGS-------LMQP------STSIQPMTPTPPT-LPCRVKEEISRSPTGEA 401
L +E G+ L Q S+S++P+ L ++ + + E
Sbjct: 317 LKILVEQKRHGNNRRKVLKLDQEAAADGESSSMRPVRDDQDNQLHGAIRSSWVQRRSKEC 376
Query: 402 ARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQ 461
V+VRI + VNI + ++ LL + LD L++ V + +F +
Sbjct: 377 -HVDVRIVDDE-VNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIFMFNTK- 433
Query: 462 CREGQDVLPKQIKSVLL 478
EG V + LL
Sbjct: 434 VSEGSAVYACAVAKKLL 450
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 36/106 (33%), Positives = 65/106 (61%)
Query: 276 VDESVKNWNAGGSATVGDNKGKR-KGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 334
VDE+ + +G S+ + KR + NL +E+RRR ++N+++ L+S++P +K D
Sbjct: 177 VDEAPSS-KSGPSSR---SSSKRCRAAEVHNL-SEKRRRSRINEKMKALQSLIPNSNKTD 231
Query: 335 RASILGDAIDYLKEL-LQ-RINDLHNELESTPTGSLMQPSTSIQPM 378
+AS+L +AI+YLK+L LQ ++ + N + P L P T++ P+
Sbjct: 232 KASMLDEAIEYLKQLQLQVQMLTMRNGINLHP---LCLPGTTLHPL 274
>TAIR|locus:2168235 [details] [associations]
symbol:AT5G65320 "AT5G65320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB011479 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 EMBL:AY070095 EMBL:AY096704
EMBL:AF488625 IPI:IPI00548412 RefSeq:NP_201335.1 UniGene:At.28395
ProteinModelPortal:Q9FKQ6 SMR:Q9FKQ6 EnsemblPlants:AT5G65320.1
GeneID:836657 KEGG:ath:AT5G65320 TAIR:At5g65320 eggNOG:NOG237691
InParanoid:Q9FKQ6 OMA:PNDQASI PhylomeDB:Q9FKQ6
ProtClustDB:CLSN2916276 Genevestigator:Q9FKQ6 Uniprot:Q9FKQ6
Length = 296
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 49/160 (30%), Positives = 73/160 (45%)
Query: 290 TVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVP-KISKM-DRASILGDAIDYLK 347
T+ D + +R ++ ER RRK++N L +L+S++P S+ D+ASI+ I YLK
Sbjct: 93 TIVDKENQRMN----HIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLK 148
Query: 348 ELLQRINDLHNELESTPTGS--------LMQPSTSIQPMTPTPPTLPCRVKEEISRSPTG 399
+L QR+ L +L++T M P S T T T
Sbjct: 149 KLEQRLQSLEAQLKATKLNQSPNIFSDFFMFPQYSTATATATA-TASSSSSSHHHHKRLE 207
Query: 400 EAARVEVRIREGRAVNIHMFCARRPGLLLSTMRALDSLGL 439
A VEV + E R NI + +P LL + +SLGL
Sbjct: 208 VVADVEVTMVE-RHANIKVLTKTQPRLLFKIINEFNSLGL 246
>TAIR|locus:2038510 [details] [associations]
symbol:AT1G06170 "AT1G06170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P61244 HOGENOM:HOG000083787 ProtClustDB:CLSN2716481
EMBL:AF488619 EMBL:AC025290 EMBL:BT004262 IPI:IPI00518401
PIR:C86197 RefSeq:NP_172107.1 RefSeq:NP_973769.1 UniGene:At.42353
ProteinModelPortal:Q9LND0 SMR:Q9LND0 EnsemblPlants:AT1G06170.1
EnsemblPlants:AT1G06170.2 GeneID:837126 KEGG:ath:AT1G06170
TAIR:At1g06170 eggNOG:NOG264433 InParanoid:Q9LND0 OMA:YASAIAD
PhylomeDB:Q9LND0 Genevestigator:Q9LND0 Uniprot:Q9LND0
Length = 420
Score = 127 (49.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 277 DESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
DE N + G + G KRK P ER RR DR L++++P +K DRA
Sbjct: 195 DEENNNLDDGLNRK-GRGSKKRKIFPT-----ERERRVHFKDRFGDLKNLIPNPTKNDRA 248
Query: 337 SILGDAIDYLKELLQRIND 355
SI+G+AIDY+KELL+ I++
Sbjct: 249 SIVGEAIDYIKELLRTIDE 267
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 127 (49.8 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 30/101 (29%), Positives = 54/101 (53%)
Query: 277 DESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
+ES G + G + + NL +ERRRR ++N+++ L+ ++P +K+D+A
Sbjct: 321 EESGDGRKEAGPSRTGLGSKRSRSAEVHNL-SERRRRDRINEKMRALQELIPNCNKVDKA 379
Query: 337 SILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQP 377
S+L +AI+YLK L L ++ S +G + P+ P
Sbjct: 380 SMLDEAIEYLKSL-----QLQVQIMSMASGYYLPPAVMFPP 415
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 286 GGSATVGDNKG---KRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDA 342
GG+ D G K + L + +AE+RRR ++N L LR +VP K+D+A++L
Sbjct: 45 GGNFPADDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATV 104
Query: 343 IDYLKELLQRIND--LHNELESTPTGSLMQPST 373
I+ +KEL Q+ + + +L + +QP T
Sbjct: 105 IEQVKELKQKAAESPIFQDLPTEADEVTVQPET 137
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 125 (49.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 290 TVGDNKGKRKGLPAKNLMAE------RRRRKKLNDRLYMLRSVVPKISKMDRASILGDAI 343
T+G+ +R G ++ AE RRRR ++N+R+ L+ ++P S+ D+ASIL +AI
Sbjct: 240 TMGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAI 299
Query: 344 DYLKELLQRI 353
DYLK L ++
Sbjct: 300 DYLKSLQMQL 309
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
Identities = 28/89 (31%), Positives = 52/89 (58%)
Query: 307 MAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTG 366
++E++RR K+N+++ L+ ++P +K D+AS+L +AI+YLK+L ++ L + G
Sbjct: 100 LSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL-----AVMNG 154
Query: 367 SLMQPSTSIQPMTPTPPTLPCRVKEEISR 395
+ P P P PPT R+ E + +
Sbjct: 155 LGLNPMRL--PQVP-PPT-HTRINETLEQ 179
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 275 KVDESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMD 334
K E N G KR + ++ERRRR+K+N+ + L+ ++P+ +K D
Sbjct: 252 KTREETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTD 311
Query: 335 RASILGDAIDYLKELLQRI 353
R+S+L D I+Y+K L +I
Sbjct: 312 RSSMLDDVIEYVKSLQSQI 330
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 295 KGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRIN 354
K + + NL +ERRRR ++N++L L+ +VP +K D+ASIL +AI+YLK L ++
Sbjct: 224 KRRTRAAEVHNL-SERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQ 282
Query: 355 DLHNELESTPTGSLMQPSTSIQPMTP 380
+ P +M P T Q M P
Sbjct: 283 IMWMTTGIVP---MMFPGTH-QLMPP 304
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 33/89 (37%), Positives = 51/89 (57%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPK--ISKMDRASILGDAIDYLKELLQRINDL-----H 357
++ ER RR+++N L +LRS++P+ K D+ASI+G AID++KEL ++ L H
Sbjct: 90 HIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQKHH 149
Query: 358 N-ELESTPTGSLMQPSTSIQPMTPTPPTL 385
N +L + T S Q S Q P +L
Sbjct: 150 NAKLNQSVTSSTSQDSNGEQENPHQPSSL 178
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 124 (48.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/60 (43%), Positives = 41/60 (68%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGS 367
AERRRR+++N+ L LRS++P +K D+AS+L + I ++KEL +R + +E PT S
Sbjct: 181 AERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKEL-KRETSVISETNLVPTES 239
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 456 VFRAEQCREGQ-DVLPKQIKSV 476
V +A C E + D+LP IK++
Sbjct: 258 VIKASLCCEDRSDLLPDMIKTL 279
>UNIPROTKB|Q8S0C6 [details] [associations]
symbol:B1112D09.6 "Uncharacterized protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
HSSP:P01106 EMBL:AP003432 EMBL:AK106333
EnsemblPlants:LOC_Os01g39330.1 eggNOG:NOG273636 OMA:LNDSFHT
Uniprot:Q8S0C6
Length = 454
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTP 364
++M+ER+RR+KLND + LRS++P SK D+ ++L +A YLK L I ELE T
Sbjct: 267 HMMSERKRREKLNDSFHTLRSLLPPCSKKDKTTVLINAAKYLKSLETEIT----ELEGTN 322
Query: 365 T 365
T
Sbjct: 323 T 323
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 48/194 (24%), Positives = 86/194 (44%)
Query: 305 NLMAERRRRKKLNDRLYMLRSVVP--KISKMDRASILGDAIDYLKELLQRINDLHNELE- 361
++ ER RR+++N+ L LRS+ P I + D+ASI+G I+++KEL Q + L ++
Sbjct: 3 HIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKKRR 62
Query: 362 ---STPT----GSLMQPS-----TSIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIR 409
+ P+ ++PS T+ P + + +E+ A VE +I
Sbjct: 63 KTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAKI- 121
Query: 410 EGRAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAE---QCREGQ 466
G V + + R G L+ + L+ L + IS L F + +C
Sbjct: 122 SGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLSL 181
Query: 467 DVLPKQI-KSVLLD 479
+ L ++ KS + D
Sbjct: 182 EELTLEVQKSFVSD 195
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 109 (43.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 349
AER+RR+++N L LR +VP S+MD+A++LG+ + Y+++L
Sbjct: 35 AERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKL 76
Score = 42 (19.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 412 RAVNIHMFCARRPGLLLSTMRALDSLGLDIQQAVISCFNG 451
R V + CA RPGL+ A S+ +A I+ G
Sbjct: 117 RRVKASVCCADRPGLMSELGDAERSVSARAVRAEIATVGG 156
>UNIPROTKB|Q7XVB7 [details] [associations]
symbol:OSJNBa0072D21.7 "OSJNBa0072D21.7 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG236355 EMBL:AL662977 ProteinModelPortal:Q7XVB7
Gramene:Q7XVB7 Uniprot:Q7XVB7
Length = 383
Score = 93 (37.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 292 GDNKGKRKGLP-AKNLMAERRRRKKLNDRLYMLRSVVPKISKM 333
GDN RK +K +++ER+RR ++ ++LY LR++VP I+K+
Sbjct: 121 GDNSATRKRRDRSKTIVSERKRRVRMKEKLYELRALVPNITKV 163
Score = 69 (29.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 332 KMDRASILGDAIDYLKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKE 391
+MD+ASI+ DA+ Y+K+L L E+ + +P+ P PP+ + +
Sbjct: 193 QMDKASIIADAVVYVKDLQAHARKLKEEVAALEEA---------RPIRPPPPSAAAQRPQ 243
Query: 392 EISRSPTGEAARVEVRIREGRAV 414
R AA++ R + AV
Sbjct: 244 RQPRRVAAAAAQL-ARAADAAAV 265
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPT 365
AERRRR+++N L LRS++P +K D+AS+L + I ++KEL ++ + + + + PT
Sbjct: 139 AERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQ-VPT 195
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 120 (47.3 bits), Expect = 0.00033, P = 0.00033
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 277 DESVKNWNAGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRA 336
DE+ A V KR + ++ER+RR ++N+R+ L+ ++P+ +K D+A
Sbjct: 261 DETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKA 320
Query: 337 SILGDAIDYLKELLQRI 353
S+L +AI+Y+K L +I
Sbjct: 321 SMLDEAIEYMKSLQLQI 337
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 119 (46.9 bits), Expect = 0.00037, P = 0.00037
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 285 AGGSATVGDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAID 344
A +A+ + G +++++ER+RR+KLND L++V+P SK D+ SIL A +
Sbjct: 235 AAAAASASAAEAPPSGNQLQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRARE 294
Query: 345 YLKELLQRINDL---HNELES 362
Y+K L ++++L + ELE+
Sbjct: 295 YVKSLESKLSELEEKNRELEA 315
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 110 (43.8 bits), Expect = 0.00039, P = 0.00039
Identities = 20/42 (47%), Positives = 32/42 (76%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKEL 349
+ERRRR ++N++L L+ ++P +K D+ S+L +AIDYLK L
Sbjct: 21 SERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSL 62
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 31/95 (32%), Positives = 54/95 (56%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G KR + ++ERRRR ++N+++ L+ ++P +K+D+AS+L +AI+YLK L
Sbjct: 304 GTRSTKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTL-- 361
Query: 352 RINDLHNELESTPTGSLMQPS---TSIQPMTPTPP 383
L ++ S TG + P T++Q + PP
Sbjct: 362 ---QLQVQMMSMGTGLCIPPMLLPTAMQHLQ-IPP 392
>UNIPROTKB|Q10LR1 [details] [associations]
symbol:Os03g0338400 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 SMART:SM00353 GO:GO:0005634
EMBL:DP000009 EMBL:AP008209 Gene3D:4.10.280.10 EMBL:CM000140
EMBL:GU120349 EMBL:AK073378 RefSeq:NP_001050055.1 UniGene:Os.53575
EnsemblPlants:LOC_Os03g21970.1 GeneID:4332778 KEGG:osa:4332778
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 Uniprot:Q10LR1
Length = 163
Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
Identities = 38/125 (30%), Positives = 59/125 (47%)
Query: 346 LKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTLPCRVKEEISRSPTG-EAARV 404
L+E LQ + + + + T LM S I+ + R+ +EI+ + RV
Sbjct: 13 LQEKLQILRSITHSHALSNTSILMDASKYIKELKQKV----VRLNQEIACAQDALRQNRV 68
Query: 405 EVR-IREGRAVNIHMFCARR-PGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQC 462
V +R G VN+ F + PGLL+S + A D LGL + +A SC + F L+ +E
Sbjct: 69 TVETLRHGFLVNV--FSGKSCPGLLVSILEAFDELGLSVLEATASCTDTFRLEAIGSENL 126
Query: 463 REGQD 467
E D
Sbjct: 127 MEKVD 131
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 117 (46.2 bits), Expect = 0.00046, P = 0.00046
Identities = 24/62 (38%), Positives = 40/62 (64%)
Query: 292 GDNKGKRKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQ 351
G + G+R A + +ERRRR ++N R+ L+ ++P SK D+ SIL D I++LK+L
Sbjct: 158 GRSNGRRGRAAAIHNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQA 217
Query: 352 RI 353
++
Sbjct: 218 QV 219
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 113 (44.8 bits), Expect = 0.00063, P = 0.00063
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 308 AERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPTGS 367
AERRRR+++N L LR ++P +MD+A++L +D +K+L ++ +++ + TP
Sbjct: 72 AERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEI---TQRTP--- 125
Query: 368 LMQPST---SIQPMTPTPPTLPCRVKEEISRSPTGEAARVEVRIREGRAVNI-HMFCARR 423
+ P T SI+ T T V + A + R I H F
Sbjct: 126 -LPPETNEVSIECFTGDAATAATTVAG--NHKTLYIKASISCDDRPDLIAGITHAF---- 178
Query: 424 PGLLLSTMRA-LDSLGLDIQQAVISC 448
GL L T+RA + SLG +Q I C
Sbjct: 179 HGLRLRTVRAEMTSLGGRVQHVFILC 204
>TAIR|locus:2828302 [details] [associations]
symbol:AT2G40435 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC002336 EMBL:AC007020
eggNOG:NOG299058 OMA:MDASKYI ProtClustDB:CLSN2693906 EMBL:AY227635
EMBL:AY649272 EMBL:AK220685 IPI:IPI00531488 RefSeq:NP_565932.1
UniGene:At.37051 ProteinModelPortal:Q8RUZ5 SMR:Q8RUZ5 PRIDE:Q8RUZ5
EnsemblPlants:AT2G40435.1 GeneID:818637 KEGG:ath:AT2G40435
TAIR:At2g40435 HOGENOM:HOG000241360 InParanoid:Q8RUZ5
PhylomeDB:Q8RUZ5 ArrayExpress:Q8RUZ5 Genevestigator:Q8RUZ5
Uniprot:Q8RUZ5
Length = 158
Score = 105 (42.0 bits), Expect = 0.00066, P = 0.00066
Identities = 33/137 (24%), Positives = 63/137 (45%)
Query: 346 LKELLQRINDLHNELESTPTGSLMQPSTSIQPMTPTPPTL-PCRVKEEISRSPTG-EAAR 403
L+E Q + + N T +M S IQ + E+ S PT +
Sbjct: 11 LQEKFQLLRSITNSHAENDTSIIMDASKYIQKLKQKVERFNQDPTAEQSSSEPTDPKTPM 70
Query: 404 VEVRIREGRAVNIHMFCAR-RPGLLLSTMRALDSLGLDIQQAVISCFNGFALDVFRAEQC 462
V V + + I++F + +PG+L+S + A + +GL++ +A SC + F+L E
Sbjct: 71 VTVETLD-KGFMINVFSGKNQPGMLVSVLEAFEDIGLNVLEARASCTDSFSLHAMGLEN- 128
Query: 463 REGQDVLPKQIKSVLLD 479
+G+++ + +K + D
Sbjct: 129 EDGENMDAEAVKQAVTD 145
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 110 (43.8 bits), Expect = 0.00088, P = 0.00088
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 286 GGSATVGDNKGKRKGLPAK-----NLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILG 340
G S G G R+ AK +A R RR +++DR +LRS+VP SKMD S+L
Sbjct: 33 GDSRVRGGGSGARRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVSMLE 92
Query: 341 DAIDYLKELLQRINDLH 357
AI Y+K L +I+ LH
Sbjct: 93 QAIHYVKFLKTQIS-LH 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 487 411 0.00080 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 94
No. of states in DFA: 615 (65 KB)
Total size of DFA: 257 KB (2137 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.52u 0.12s 34.64t Elapsed: 00:00:02
Total cpu time: 34.52u 0.12s 34.64t Elapsed: 00:00:02
Start: Fri May 10 06:28:01 2013 End: Fri May 10 06:28:03 2013