Query 011375
Match_columns 487
No_of_seqs 288 out of 1424
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 06:50:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qvo_A NMRA family protein; st 94.8 0.023 7.8E-07 53.2 4.5 31 447-477 22-53 (236)
2 3e8x_A Putative NAD-dependent 94.5 0.033 1.1E-06 51.9 4.9 29 449-477 22-50 (236)
3 3ppi_A 3-hydroxyacyl-COA dehyd 93.0 0.078 2.7E-06 50.9 4.6 30 448-477 30-59 (281)
4 3rkr_A Short chain oxidoreduct 93.0 0.079 2.7E-06 50.5 4.6 29 449-477 30-58 (262)
5 3orf_A Dihydropteridine reduct 92.7 0.08 2.7E-06 50.2 4.2 30 448-477 22-51 (251)
6 3ctm_A Carbonyl reductase; alc 92.6 0.053 1.8E-06 51.9 2.7 38 440-477 26-63 (279)
7 1vl8_A Gluconate 5-dehydrogena 92.6 0.1 3.5E-06 50.1 4.7 30 448-477 21-50 (267)
8 3o38_A Short chain dehydrogena 92.6 0.093 3.2E-06 49.8 4.4 30 448-477 22-52 (266)
9 1xu9_A Corticosteroid 11-beta- 92.4 0.1 3.5E-06 50.2 4.6 29 449-477 29-57 (286)
10 3sju_A Keto reductase; short-c 92.3 0.11 3.9E-06 50.1 4.7 29 449-477 25-53 (279)
11 2b4q_A Rhamnolipids biosynthes 92.3 0.11 3.9E-06 50.1 4.7 30 448-477 29-58 (276)
12 2rhc_B Actinorhodin polyketide 92.3 0.12 4E-06 49.9 4.7 30 448-477 22-51 (277)
13 1xg5_A ARPG836; short chain de 92.3 0.12 4E-06 49.6 4.7 29 449-477 33-61 (279)
14 4dyv_A Short-chain dehydrogena 92.2 0.11 3.7E-06 50.3 4.4 30 448-477 28-57 (272)
15 2nwq_A Probable short-chain de 92.2 0.092 3.1E-06 50.8 3.9 29 449-477 22-50 (272)
16 1ae1_A Tropinone reductase-I; 92.2 0.12 4.2E-06 49.5 4.8 29 449-477 22-50 (273)
17 2c07_A 3-oxoacyl-(acyl-carrier 92.1 0.13 4.3E-06 49.7 4.8 29 449-477 45-73 (285)
18 3tjr_A Short chain dehydrogena 92.1 0.12 4.1E-06 50.6 4.7 30 448-477 31-60 (301)
19 1yb1_A 17-beta-hydroxysteroid 92.1 0.13 4.3E-06 49.3 4.7 29 449-477 32-60 (272)
20 4dry_A 3-oxoacyl-[acyl-carrier 92.1 0.11 3.9E-06 50.3 4.4 30 448-477 33-62 (281)
21 3r1i_A Short-chain type dehydr 92.0 0.17 6E-06 48.9 5.6 36 442-477 26-61 (276)
22 2nm0_A Probable 3-oxacyl-(acyl 92.0 0.11 3.6E-06 49.7 4.0 30 448-477 21-50 (253)
23 3grp_A 3-oxoacyl-(acyl carrier 91.9 0.13 4.4E-06 49.5 4.6 30 448-477 27-56 (266)
24 3ftp_A 3-oxoacyl-[acyl-carrier 91.9 0.13 4.3E-06 49.7 4.5 30 448-477 28-57 (270)
25 3gvc_A Oxidoreductase, probabl 91.9 0.12 4.2E-06 50.1 4.4 30 448-477 29-58 (277)
26 4iin_A 3-ketoacyl-acyl carrier 91.8 0.12 4.2E-06 49.4 4.3 31 447-477 28-58 (271)
27 4ibo_A Gluconate dehydrogenase 91.6 0.14 4.7E-06 49.4 4.5 31 447-477 25-55 (271)
28 3rih_A Short chain dehydrogena 91.6 0.15 5E-06 50.0 4.6 30 448-477 41-70 (293)
29 4e3z_A Putative oxidoreductase 91.6 0.14 4.8E-06 48.9 4.4 30 448-477 26-55 (272)
30 1w6u_A 2,4-dienoyl-COA reducta 91.6 0.16 5.3E-06 49.0 4.7 29 449-477 27-55 (302)
31 4imr_A 3-oxoacyl-(acyl-carrier 91.5 0.14 4.7E-06 49.6 4.2 31 447-477 32-62 (275)
32 4dqx_A Probable oxidoreductase 91.4 0.2 6.9E-06 48.4 5.3 31 447-477 26-56 (277)
33 3gem_A Short chain dehydrogena 91.3 0.11 3.8E-06 49.8 3.4 29 449-477 28-56 (260)
34 3ruf_A WBGU; rossmann fold, UD 91.3 0.14 4.9E-06 50.1 4.2 31 447-477 24-54 (351)
35 3cxt_A Dehydrogenase with diff 91.3 0.17 5.9E-06 49.3 4.7 30 448-477 34-63 (291)
36 4fc7_A Peroxisomal 2,4-dienoyl 91.2 0.19 6.3E-06 48.4 4.8 29 449-477 28-56 (277)
37 3gk3_A Acetoacetyl-COA reducta 91.2 0.13 4.4E-06 49.2 3.7 30 448-477 25-54 (269)
38 3v8b_A Putative dehydrogenase, 91.2 0.18 6.3E-06 48.9 4.8 30 448-477 28-57 (283)
39 4iiu_A 3-oxoacyl-[acyl-carrier 91.1 0.17 5.8E-06 48.2 4.4 29 449-477 27-55 (267)
40 1xhl_A Short-chain dehydrogena 91.0 0.17 6E-06 49.4 4.5 29 449-477 27-55 (297)
41 1ja9_A 4HNR, 1,3,6,8-tetrahydr 91.0 0.15 5.3E-06 48.0 3.9 30 448-477 21-50 (274)
42 3uf0_A Short-chain dehydrogena 90.9 0.2 6.7E-06 48.4 4.6 30 448-477 31-60 (273)
43 4dmm_A 3-oxoacyl-[acyl-carrier 90.7 0.23 8E-06 47.7 5.0 31 447-477 27-57 (269)
44 3un1_A Probable oxidoreductase 90.7 0.17 6E-06 48.3 4.1 30 448-477 28-57 (260)
45 4fgs_A Probable dehydrogenase 90.7 0.21 7.3E-06 49.1 4.8 35 449-483 30-67 (273)
46 3ijr_A Oxidoreductase, short c 90.5 0.2 6.9E-06 48.7 4.4 29 449-477 48-76 (291)
47 3ic5_A Putative saccharopine d 90.4 0.23 7.8E-06 40.5 4.0 28 449-477 6-34 (118)
48 3uxy_A Short-chain dehydrogena 90.4 0.19 6.5E-06 48.3 4.1 30 448-477 28-57 (266)
49 2q1w_A Putative nucleotide sug 90.2 0.21 7.1E-06 48.9 4.2 29 449-477 22-50 (333)
50 2x9g_A PTR1, pteridine reducta 90.1 0.21 7.1E-06 48.2 4.1 29 449-477 24-52 (288)
51 3v2g_A 3-oxoacyl-[acyl-carrier 90.1 0.25 8.7E-06 47.6 4.7 32 446-477 29-60 (271)
52 3kvo_A Hydroxysteroid dehydrog 90.1 0.19 6.5E-06 50.7 3.9 30 448-477 45-74 (346)
53 3v2h_A D-beta-hydroxybutyrate 90.1 0.2 6.8E-06 48.5 3.9 30 448-477 25-54 (281)
54 1sny_A Sniffer CG10964-PA; alp 89.8 0.21 7.1E-06 47.1 3.8 30 448-477 21-53 (267)
55 2b69_A UDP-glucuronate decarbo 89.7 0.24 8.4E-06 48.4 4.3 30 448-477 27-56 (343)
56 4egb_A DTDP-glucose 4,6-dehydr 89.6 0.21 7.1E-06 48.8 3.7 31 447-477 23-55 (346)
57 3u5t_A 3-oxoacyl-[acyl-carrier 89.5 0.24 8.2E-06 47.6 4.0 30 448-477 27-56 (267)
58 4da9_A Short-chain dehydrogena 89.5 0.3 1E-05 47.2 4.7 30 448-477 29-58 (280)
59 1n7h_A GDP-D-mannose-4,6-dehyd 89.5 0.25 8.5E-06 49.1 4.2 29 449-477 29-57 (381)
60 1g0o_A Trihydroxynaphthalene r 89.4 0.26 8.7E-06 47.5 4.1 30 448-477 29-58 (283)
61 3slg_A PBGP3 protein; structur 89.4 0.27 9.4E-06 48.6 4.4 29 449-477 25-54 (372)
62 1sb8_A WBPP; epimerase, 4-epim 89.3 0.26 9.1E-06 48.4 4.2 29 449-477 28-56 (352)
63 2qhx_A Pteridine reductase 1; 89.2 0.25 8.5E-06 49.1 3.9 29 449-477 47-75 (328)
64 2c5a_A GDP-mannose-3', 5'-epim 89.1 0.33 1.1E-05 48.5 4.8 31 447-477 28-58 (379)
65 1lu9_A Methylene tetrahydromet 89.0 0.33 1.1E-05 47.2 4.6 30 448-477 119-148 (287)
66 1t2a_A GDP-mannose 4,6 dehydra 89.0 0.28 9.7E-06 48.6 4.2 29 449-477 25-53 (375)
67 3r3s_A Oxidoreductase; structu 88.9 0.3 1E-05 47.5 4.2 29 449-477 50-78 (294)
68 2p91_A Enoyl-[acyl-carrier-pro 88.9 0.28 9.6E-06 47.2 3.9 29 449-477 22-52 (285)
69 3nzo_A UDP-N-acetylglucosamine 88.6 0.34 1.2E-05 49.4 4.6 29 449-477 36-65 (399)
70 2gn4_A FLAA1 protein, UDP-GLCN 88.4 0.3 1E-05 48.6 3.9 29 449-477 22-52 (344)
71 3t7c_A Carveol dehydrogenase; 88.4 0.34 1.2E-05 47.1 4.2 30 448-477 28-57 (299)
72 3k31_A Enoyl-(acyl-carrier-pro 88.3 0.37 1.3E-05 46.9 4.4 30 448-477 30-61 (296)
73 3grk_A Enoyl-(acyl-carrier-pro 88.1 0.39 1.3E-05 46.7 4.4 30 448-477 31-62 (293)
74 3oec_A Carveol dehydrogenase ( 87.9 0.36 1.2E-05 47.6 4.1 30 448-477 46-75 (317)
75 2q1s_A Putative nucleotide sug 87.5 0.4 1.4E-05 47.8 4.2 29 449-477 33-62 (377)
76 4f6c_A AUSA reductase domain p 87.4 0.37 1.3E-05 49.0 4.0 31 447-477 68-98 (427)
77 2x6t_A ADP-L-glycero-D-manno-h 87.2 0.34 1.2E-05 47.7 3.4 29 449-477 47-76 (357)
78 3rku_A Oxidoreductase YMR226C; 87.0 0.4 1.4E-05 46.7 3.8 29 449-477 34-65 (287)
79 3qlj_A Short chain dehydrogena 86.9 0.43 1.5E-05 47.0 3.9 30 448-477 27-56 (322)
80 3nrc_A Enoyl-[acyl-carrier-pro 86.8 0.44 1.5E-05 45.8 3.9 29 449-477 27-57 (280)
81 3oh8_A Nucleoside-diphosphate 86.5 0.47 1.6E-05 50.0 4.2 29 449-477 148-176 (516)
82 2g1u_A Hypothetical protein TM 85.1 1.1 3.9E-05 39.0 5.4 36 447-483 18-56 (155)
83 3s8m_A Enoyl-ACP reductase; ro 84.1 0.75 2.6E-05 48.2 4.3 32 446-477 59-91 (422)
84 4dqv_A Probable peptide synthe 83.8 0.48 1.6E-05 49.4 2.7 31 447-477 72-105 (478)
85 3zu3_A Putative reductase YPO4 83.8 0.8 2.7E-05 47.8 4.3 33 445-477 44-77 (405)
86 4f6l_B AUSA reductase domain p 82.7 0.67 2.3E-05 48.4 3.3 31 447-477 149-179 (508)
87 3u0b_A Oxidoreductase, short c 82.2 0.96 3.3E-05 47.3 4.3 30 448-477 213-242 (454)
88 4eue_A Putative reductase CA_C 80.8 1.2 4.1E-05 46.5 4.4 32 446-477 58-91 (418)
89 1nvt_A Shikimate 5'-dehydrogen 80.4 1.4 4.8E-05 42.9 4.4 42 433-477 109-155 (287)
90 3t4e_A Quinate/shikimate dehyd 79.3 1.5 5E-05 44.0 4.3 46 431-477 131-177 (312)
91 1nyt_A Shikimate 5-dehydrogena 79.3 1.7 5.8E-05 42.0 4.6 30 447-477 118-147 (271)
92 1p77_A Shikimate 5-dehydrogena 78.3 1.4 4.6E-05 42.8 3.6 32 445-477 116-147 (272)
93 4ggo_A Trans-2-enoyl-COA reduc 77.9 1.6 5.6E-05 45.4 4.2 32 446-477 48-80 (401)
94 1z7e_A Protein aRNA; rossmann 77.7 2.3 7.9E-05 46.0 5.6 29 449-477 316-345 (660)
95 1pqw_A Polyketide synthase; ro 77.3 2.8 9.7E-05 37.6 5.2 31 447-477 38-68 (198)
96 3oj0_A Glutr, glutamyl-tRNA re 75.9 1.3 4.4E-05 38.2 2.4 29 448-477 21-49 (144)
97 2egg_A AROE, shikimate 5-dehyd 75.8 2.5 8.4E-05 41.7 4.7 33 444-477 137-170 (297)
98 2et6_A (3R)-hydroxyacyl-COA de 75.7 1.8 6.3E-05 46.9 4.1 30 448-477 322-351 (604)
99 2fr1_A Erythromycin synthase, 75.0 1.6 5.6E-05 45.9 3.4 30 448-477 226-256 (486)
100 3jyo_A Quinate/shikimate dehyd 74.9 2.6 8.9E-05 41.4 4.6 30 447-477 126-156 (283)
101 2z5l_A Tylkr1, tylactone synth 74.6 2.2 7.4E-05 45.4 4.2 30 448-477 259-289 (511)
102 3tnl_A Shikimate dehydrogenase 74.2 2.7 9.4E-05 42.1 4.6 33 444-477 150-183 (315)
103 3o8q_A Shikimate 5-dehydrogena 73.5 3.1 0.00011 40.8 4.8 32 445-477 123-155 (281)
104 4gx0_A TRKA domain protein; me 73.1 1.8 6.1E-05 46.0 3.1 92 377-483 281-385 (565)
105 3mje_A AMPHB; rossmann fold, o 72.0 3.1 0.00011 44.1 4.7 29 449-477 240-269 (496)
106 3pwz_A Shikimate dehydrogenase 71.3 3.3 0.00011 40.4 4.3 30 447-477 119-149 (272)
107 1p9o_A Phosphopantothenoylcyst 71.1 9.8 0.00033 38.2 7.8 68 375-477 15-84 (313)
108 3c85_A Putative glutathione-re 70.1 3.1 0.00011 37.0 3.6 34 449-483 40-77 (183)
109 3qp9_A Type I polyketide synth 68.5 2.8 9.5E-05 44.7 3.4 30 448-477 251-280 (525)
110 1u7z_A Coenzyme A biosynthesis 68.4 3.2 0.00011 39.8 3.4 21 457-477 33-53 (226)
111 3don_A Shikimate dehydrogenase 67.9 3.2 0.00011 40.7 3.4 32 445-477 114-146 (277)
112 2vns_A Metalloreductase steap3 67.0 4.3 0.00015 37.6 4.0 30 447-477 27-56 (215)
113 4eye_A Probable oxidoreductase 66.0 15 0.00051 36.2 7.9 83 394-483 100-198 (342)
114 3hu5_A Isochorismatase family 66.0 27 0.00091 32.1 9.2 36 440-477 120-156 (204)
115 3fbt_A Chorismate mutase and s 65.8 4.9 0.00017 39.6 4.3 34 443-477 117-151 (282)
116 1v3u_A Leukotriene B4 12- hydr 65.7 9.3 0.00032 37.3 6.3 32 446-477 144-175 (333)
117 2eih_A Alcohol dehydrogenase; 65.6 6.8 0.00023 38.5 5.3 37 447-483 166-205 (343)
118 2o7s_A DHQ-SDH PR, bifunctiona 64.8 3.5 0.00012 43.8 3.2 28 449-477 365-392 (523)
119 3jyn_A Quinone oxidoreductase; 64.8 7.4 0.00025 38.0 5.4 38 446-483 139-179 (325)
120 1wly_A CAAR, 2-haloacrylate re 64.4 7 0.00024 38.2 5.1 31 447-477 145-175 (333)
121 1jvb_A NAD(H)-dependent alcoho 62.7 17 0.00059 35.6 7.7 67 416-483 127-210 (347)
122 2j3h_A NADP-dependent oxidored 62.6 9.3 0.00032 37.4 5.6 37 447-483 155-194 (345)
123 1qor_A Quinone oxidoreductase; 61.6 9.4 0.00032 37.1 5.4 31 447-477 140-170 (327)
124 3hdj_A Probable ornithine cycl 61.5 12 0.00042 37.1 6.3 77 394-477 64-151 (313)
125 4b7c_A Probable oxidoreductase 61.4 11 0.00036 36.9 5.8 38 446-483 148-188 (336)
126 1yb5_A Quinone oxidoreductase; 60.8 16 0.00054 36.2 7.0 31 447-477 170-200 (351)
127 1iz0_A Quinone oxidoreductase; 60.3 17 0.00057 34.9 6.9 75 396-477 69-155 (302)
128 3qwb_A Probable quinone oxidor 60.1 25 0.00087 34.1 8.3 31 447-477 148-178 (334)
129 3d6n_B Aspartate carbamoyltran 58.9 21 0.00072 35.4 7.4 92 392-483 56-184 (291)
130 3jx9_A Putative phosphoheptose 58.8 7.3 0.00025 35.7 3.8 70 371-444 79-158 (170)
131 2hk9_A Shikimate dehydrogenase 58.8 14 0.00047 35.5 6.0 33 444-477 125-157 (275)
132 2qgz_A Helicase loader, putati 58.6 11 0.00037 37.0 5.3 39 439-477 142-186 (308)
133 3nx4_A Putative oxidoreductase 58.2 22 0.00076 34.3 7.4 72 412-483 95-185 (324)
134 2hcy_A Alcohol dehydrogenase 1 58.2 20 0.00069 35.2 7.2 62 416-477 126-199 (347)
135 4dup_A Quinone oxidoreductase; 57.4 23 0.00078 35.0 7.5 67 417-483 124-206 (353)
136 2i99_A MU-crystallin homolog; 57.3 26 0.00089 34.3 7.8 83 394-477 70-165 (312)
137 3gms_A Putative NADPH:quinone 56.8 12 0.0004 36.8 5.2 37 447-483 144-183 (340)
138 2j8z_A Quinone oxidoreductase; 56.8 13 0.00046 36.7 5.7 31 447-477 162-192 (354)
139 3slk_A Polyketide synthase ext 56.5 6.7 0.00023 43.9 3.7 30 448-477 530-561 (795)
140 1xa0_A Putative NADPH dependen 56.2 23 0.00078 34.3 7.2 62 416-477 102-179 (328)
141 1jw9_B Molybdopterin biosynthe 55.9 7.4 0.00025 37.1 3.5 32 449-481 32-65 (249)
142 2zb4_A Prostaglandin reductase 55.8 9.2 0.00032 37.7 4.3 29 449-477 162-191 (357)
143 2axq_A Saccharopine dehydrogen 55.4 8.5 0.00029 40.5 4.1 29 448-477 23-52 (467)
144 1j2r_A Hypothetical isochorism 54.3 94 0.0032 28.0 10.6 36 440-477 126-162 (199)
145 1omo_A Alanine dehydrogenase; 54.1 36 0.0012 33.6 8.3 83 394-477 61-155 (322)
146 3lns_A Benzaldehyde dehydrogen 53.5 16 0.00055 38.0 5.8 48 426-477 188-235 (457)
147 1tt7_A YHFP; alcohol dehydroge 52.8 24 0.00081 34.2 6.6 34 444-477 147-180 (330)
148 2c0c_A Zinc binding alcohol de 52.7 11 0.00038 37.5 4.3 30 448-477 164-193 (362)
149 2pff_A Fatty acid synthase sub 52.1 7 0.00024 47.2 3.1 54 424-477 445-506 (1688)
150 2eez_A Alanine dehydrogenase; 51.4 13 0.00045 37.3 4.6 28 449-477 167-194 (369)
151 2uv9_A Fatty acid synthase alp 50.6 10 0.00035 46.6 4.2 30 448-477 652-682 (1878)
152 2uv8_A Fatty acid synthase sub 50.4 10 0.00034 46.7 4.1 30 448-477 675-705 (1887)
153 1npy_A Hypothetical shikimate 50.3 10 0.00034 37.0 3.4 29 448-477 119-148 (271)
154 3zen_D Fatty acid synthase; tr 49.4 11 0.00038 48.5 4.4 30 448-477 2136-2166(3089)
155 3u62_A Shikimate dehydrogenase 48.4 14 0.00049 35.5 4.1 27 450-477 110-137 (253)
156 1pjc_A Protein (L-alanine dehy 48.0 14 0.00049 37.0 4.3 28 449-477 168-195 (361)
157 3pi7_A NADH oxidoreductase; gr 47.5 25 0.00087 34.4 6.0 87 393-483 102-203 (349)
158 1iuk_A Hypothetical protein TT 46.9 14 0.00049 32.1 3.6 34 447-480 12-49 (140)
159 1zud_1 Adenylyltransferase THI 46.6 12 0.00039 35.9 3.2 33 449-482 29-63 (251)
160 3ond_A Adenosylhomocysteinase; 46.4 16 0.00055 38.9 4.5 29 448-477 265-293 (488)
161 4gel_A Mitochondrial cardiolip 46.3 36 0.0012 31.0 6.5 73 383-457 84-172 (220)
162 3phh_A Shikimate dehydrogenase 45.2 18 0.00063 35.3 4.4 29 448-477 118-146 (269)
163 1vq2_A DCMP deaminase, deoxycy 45.0 18 0.00063 33.3 4.2 70 387-481 108-178 (193)
164 3gqv_A Enoyl reductase; medium 44.7 83 0.0028 31.1 9.3 72 412-483 104-202 (371)
165 2w58_A DNAI, primosome compone 43.9 31 0.0011 30.6 5.5 29 449-477 55-87 (202)
166 3irv_A Cysteine hydrolase; str 42.3 1.3E+02 0.0044 28.2 9.8 32 446-477 137-169 (233)
167 3fbg_A Putative arginate lyase 42.0 49 0.0017 32.4 7.0 36 448-483 151-189 (346)
168 3gaz_A Alcohol dehydrogenase s 41.6 34 0.0012 33.5 5.8 71 413-483 103-188 (343)
169 2duw_A Putative COA-binding pr 41.2 16 0.00054 31.9 3.0 33 448-480 13-49 (145)
170 2ef0_A Ornithine carbamoyltran 41.0 30 0.001 34.4 5.3 92 392-483 67-190 (301)
171 2d59_A Hypothetical protein PH 40.8 22 0.00076 30.9 3.8 30 448-477 22-54 (144)
172 1y81_A Conserved hypothetical 40.7 24 0.00083 30.6 4.1 30 448-477 14-46 (138)
173 4f3x_A Putative aldehyde dehyd 40.5 43 0.0015 35.3 6.7 53 422-477 215-268 (498)
174 4huj_A Uncharacterized protein 40.3 19 0.00067 33.1 3.6 28 449-477 24-51 (220)
175 1lnq_A MTHK channels, potassiu 40.1 19 0.00065 35.2 3.7 33 448-482 115-150 (336)
176 4ekn_B Aspartate carbamoyltran 40.1 71 0.0024 31.8 7.8 92 392-483 62-190 (306)
177 2d5c_A AROE, shikimate 5-dehyd 39.7 22 0.00074 33.7 3.9 27 450-477 118-144 (263)
178 1gpj_A Glutamyl-tRNA reductase 39.6 22 0.00076 36.2 4.2 30 447-477 166-196 (404)
179 2vz8_A Fatty acid synthase; tr 39.6 17 0.00057 46.1 3.8 29 449-477 1885-1914(2512)
180 3tum_A Shikimate dehydrogenase 39.5 26 0.00089 34.1 4.5 46 431-477 108-154 (269)
181 2od4_A Hypothetical protein; m 39.3 1.2 4.2E-05 36.0 -4.2 48 395-451 35-83 (101)
182 1js1_X Transcarbamylase; alpha 39.3 49 0.0017 33.3 6.5 90 392-483 58-208 (324)
183 2vn8_A Reticulon-4-interacting 39.2 41 0.0014 33.4 6.0 37 447-483 183-221 (375)
184 3ros_A NAD-dependent aldehyde 39.2 42 0.0014 35.2 6.4 52 423-477 179-230 (484)
185 3ih5_A Electron transfer flavo 38.7 18 0.00061 34.1 3.1 83 383-470 23-112 (217)
186 2kjq_A DNAA-related protein; s 38.4 33 0.0011 29.7 4.6 44 432-477 22-69 (149)
187 3sza_A Aldehyde dehydrogenase, 38.3 27 0.00093 36.5 4.7 47 427-477 179-225 (469)
188 4a8p_A Putrescine carbamoyltra 37.9 1.1E+02 0.0036 31.3 8.8 92 392-483 63-189 (355)
189 3r31_A BADH, betaine aldehyde 37.9 44 0.0015 35.4 6.3 52 423-477 206-257 (517)
190 2pv7_A T-protein [includes: ch 37.9 26 0.00088 33.9 4.2 29 449-477 22-50 (298)
191 1ml4_A Aspartate transcarbamoy 37.6 97 0.0033 30.8 8.4 92 392-483 66-193 (308)
192 1im5_A 180AA long hypothetical 37.4 2.1E+02 0.0073 25.1 10.4 36 440-477 114-150 (180)
193 4a0s_A Octenoyl-COA reductase/ 37.0 38 0.0013 34.4 5.5 37 447-483 220-259 (447)
194 3tqh_A Quinone oxidoreductase; 36.8 48 0.0016 32.0 6.0 69 413-481 106-188 (321)
195 2i6u_A Otcase, ornithine carba 36.7 41 0.0014 33.5 5.5 92 392-483 61-185 (307)
196 2vhw_A Alanine dehydrogenase; 35.9 29 0.00098 35.1 4.3 28 449-477 169-196 (377)
197 4e4g_A Methylmalonate-semialde 35.7 52 0.0018 34.9 6.5 52 423-477 218-269 (521)
198 3tg2_A Vibriobactin-specific i 35.5 1.8E+02 0.0063 27.0 9.6 31 447-477 137-168 (223)
199 3i44_A Aldehyde dehydrogenase; 35.5 54 0.0018 34.5 6.5 52 423-477 217-269 (497)
200 1x7d_A Ornithine cyclodeaminas 35.4 84 0.0029 31.5 7.6 83 394-477 65-159 (350)
201 3ggo_A Prephenate dehydrogenas 35.3 34 0.0012 33.6 4.7 29 448-477 33-63 (314)
202 1vlv_A Otcase, ornithine carba 35.1 80 0.0027 31.7 7.3 92 392-483 80-204 (325)
203 1a4s_A ALDH, betaine aldehyde 34.7 55 0.0019 34.5 6.4 52 423-477 211-262 (503)
204 3goh_A Alcohol dehydrogenase, 34.6 98 0.0034 29.6 7.8 85 394-483 81-179 (315)
205 1pq3_A Arginase II, mitochondr 34.1 84 0.0029 30.6 7.3 98 377-477 68-195 (306)
206 3v4c_A Aldehyde dehydrogenase 33.8 48 0.0016 35.1 5.8 49 426-477 234-285 (528)
207 1t90_A MMSDH, probable methylm 32.8 57 0.002 34.1 6.1 52 423-477 197-248 (486)
208 4h7n_A Aldehyde dehydrogenase; 32.7 47 0.0016 34.6 5.4 47 426-477 185-231 (474)
209 3k6j_A Protein F01G10.3, confi 32.6 41 0.0014 35.3 4.9 33 444-477 50-82 (460)
210 1jzt_A Hypothetical 27.5 kDa p 32.1 45 0.0015 32.0 4.8 29 449-477 60-90 (246)
211 4ggj_A Mitochondrial cardiolip 32.1 29 0.001 31.7 3.3 52 383-434 72-134 (196)
212 1win_A Flotillin 2; BAND 7 dom 32.1 30 0.001 30.1 3.2 30 377-406 91-121 (143)
213 3ek1_A Aldehyde dehydrogenase; 31.9 68 0.0023 33.8 6.5 53 423-477 224-276 (504)
214 2o8n_A APOA-I binding protein; 31.8 48 0.0016 32.3 5.0 29 449-477 81-111 (265)
215 2imp_A Lactaldehyde dehydrogen 31.7 64 0.0022 33.6 6.2 52 423-477 198-250 (479)
216 2uyy_A N-PAC protein; long-cha 31.5 45 0.0016 32.0 4.8 29 448-477 30-58 (316)
217 2j6l_A Aldehyde dehydrogenase 31.5 63 0.0022 34.0 6.2 52 423-477 217-268 (500)
218 3iwj_A Putative aminoaldehyde 31.5 59 0.002 34.2 6.0 53 423-477 207-259 (503)
219 3krt_A Crotonyl COA reductase; 31.4 53 0.0018 33.6 5.5 37 447-483 228-267 (456)
220 1zcj_A Peroxisomal bifunctiona 31.3 48 0.0017 34.4 5.2 31 446-477 35-65 (463)
221 2cdc_A Glucose dehydrogenase g 31.2 33 0.0011 33.9 3.8 29 448-477 181-209 (366)
222 4a8t_A Putrescine carbamoyltra 31.1 1.1E+02 0.0037 30.9 7.6 92 392-483 85-211 (339)
223 1dxh_A Ornithine carbamoyltran 30.4 70 0.0024 32.3 6.0 92 392-483 67-192 (335)
224 3u4j_A NAD-dependent aldehyde 30.1 72 0.0025 33.8 6.4 52 423-477 217-269 (528)
225 3d4o_A Dipicolinate synthase s 29.6 45 0.0016 32.1 4.4 29 448-477 155-183 (293)
226 3r7f_A Aspartate carbamoyltran 29.5 1.3E+02 0.0046 29.8 7.8 92 392-483 58-185 (304)
227 1pvv_A Otcase, ornithine carba 29.5 92 0.0032 31.1 6.7 92 392-483 68-191 (315)
228 1pg5_A Aspartate carbamoyltran 29.4 65 0.0022 31.9 5.5 92 392-483 60-188 (299)
229 1leh_A Leucine dehydrogenase; 29.3 44 0.0015 33.9 4.4 29 448-477 173-201 (364)
230 2rir_A Dipicolinate synthase, 29.2 47 0.0016 32.1 4.4 29 448-477 157-185 (300)
231 3rh9_A Succinate-semialdehyde 29.2 72 0.0025 33.7 6.2 52 423-477 203-255 (506)
232 3b4w_A Aldehyde dehydrogenase; 29.0 61 0.0021 34.1 5.5 52 423-477 202-253 (495)
233 3jz4_A Succinate-semialdehyde 29.0 71 0.0024 33.3 6.0 53 423-477 201-253 (481)
234 3ifg_A Succinate-semialdehyde 28.9 74 0.0025 33.3 6.2 53 423-477 204-256 (484)
235 1wnd_A Putative betaine aldehy 28.9 84 0.0029 33.0 6.6 52 423-477 214-266 (495)
236 1duv_G Octase-1, ornithine tra 28.8 1.3E+02 0.0045 30.2 7.7 92 392-483 66-192 (333)
237 3k2w_A Betaine-aldehyde dehydr 28.6 65 0.0022 33.8 5.7 52 423-477 204-256 (497)
238 2d4e_A 5-carboxymethyl-2-hydro 28.6 89 0.003 33.0 6.8 51 423-477 218-270 (515)
239 3d3k_A Enhancer of mRNA-decapp 28.5 64 0.0022 31.1 5.2 29 449-477 87-117 (259)
240 3fgn_A Dethiobiotin synthetase 28.4 39 0.0013 32.4 3.6 37 441-477 18-60 (251)
241 3etf_A Putative succinate-semi 28.3 59 0.002 33.7 5.2 52 423-477 182-233 (462)
242 1ez0_A ALDH, aldehyde dehydrog 27.9 71 0.0024 33.6 5.8 49 426-477 201-252 (510)
243 3uog_A Alcohol dehydrogenase; 27.9 77 0.0026 31.2 5.8 36 447-483 189-227 (363)
244 2fq1_A Isochorismatase; ENTB, 27.6 4E+02 0.014 25.3 11.0 36 440-477 139-175 (287)
245 1efp_A ETF, protein (electron 27.5 65 0.0022 31.9 5.1 95 377-477 9-111 (307)
246 4h17_A Hydrolase, isochorismat 27.4 2.1E+02 0.0073 25.9 8.4 96 378-477 45-153 (197)
247 1bxs_A Aldehyde dehydrogenase; 27.0 95 0.0033 32.6 6.6 52 423-477 215-268 (501)
248 1rjw_A ADH-HT, alcohol dehydro 27.0 54 0.0018 32.0 4.4 35 448-483 165-202 (339)
249 1y8q_A Ubiquitin-like 1 activa 26.6 36 0.0012 34.1 3.1 33 448-481 36-70 (346)
250 2dq4_A L-threonine 3-dehydroge 26.5 50 0.0017 32.2 4.1 34 449-483 166-203 (343)
251 3qxc_A Dethiobiotin synthetase 26.5 44 0.0015 31.9 3.6 32 446-477 19-55 (242)
252 4f2g_A Otcase 1, ornithine car 26.4 88 0.003 31.2 5.9 92 392-483 67-190 (309)
253 3ju8_A Succinylglutamic semial 26.4 77 0.0026 33.2 5.7 50 423-475 195-244 (490)
254 3mcw_A Putative hydrolase; iso 26.2 2.7E+02 0.0092 25.1 8.8 94 380-477 36-143 (198)
255 3ecs_A Translation initiation 26.0 33 0.0011 34.4 2.6 51 425-477 173-228 (315)
256 3tpf_A Otcase, ornithine carba 25.9 1E+02 0.0034 30.7 6.2 92 392-483 58-182 (307)
257 1x9g_A Putative MAR1; structur 25.9 3.2E+02 0.011 24.9 9.3 31 447-477 106-137 (200)
258 3gd5_A Otcase, ornithine carba 25.9 94 0.0032 31.2 6.0 92 392-483 70-193 (323)
259 1o04_A Aldehyde dehydrogenase, 25.9 97 0.0033 32.6 6.4 52 423-477 214-267 (500)
260 2b34_A F35G2.2, MAR1 ribonucle 25.9 1.6E+02 0.0056 26.7 7.3 88 379-477 34-131 (199)
261 3kl2_A Putative isochorismatas 25.8 2.3E+02 0.0079 26.2 8.5 32 446-477 149-181 (226)
262 2aeb_A Arginase 1; hydrolase, 25.2 1.1E+02 0.0036 30.2 6.2 98 377-477 72-199 (322)
263 3d3j_A Enhancer of mRNA-decapp 25.2 62 0.0021 32.1 4.5 29 449-477 134-164 (306)
264 4hv4_A UDP-N-acetylmuramate--L 25.2 39 0.0013 35.4 3.2 33 444-477 18-51 (494)
265 4gim_A Pseudouridine-5'-phosph 25.0 34 0.0012 34.6 2.5 26 371-398 263-288 (335)
266 4ep1_A Otcase, ornithine carba 25.0 82 0.0028 31.9 5.4 92 392-483 92-215 (340)
267 3h5n_A MCCB protein; ubiquitin 24.9 35 0.0012 34.3 2.7 33 448-481 118-152 (353)
268 3ff4_A Uncharacterized protein 24.5 49 0.0017 28.3 3.2 31 447-477 3-36 (122)
269 3iup_A Putative NADPH:quinone 24.4 51 0.0017 32.9 3.8 83 393-483 113-210 (379)
270 2g0t_A Conserved hypothetical 24.4 1.1E+02 0.0037 31.0 6.2 87 381-477 104-203 (350)
271 4eqp_A Thermonuclease; staphyl 24.4 27 0.00091 30.7 1.5 53 426-483 14-80 (143)
272 4gx0_A TRKA domain protein; me 24.3 54 0.0019 34.5 4.1 35 448-483 127-164 (565)
273 3k96_A Glycerol-3-phosphate de 24.2 55 0.0019 32.8 4.0 29 448-477 29-57 (356)
274 1oth_A Protein (ornithine tran 24.0 70 0.0024 32.0 4.6 92 392-483 68-191 (321)
275 4dng_A Uncharacterized aldehyd 24.0 77 0.0026 33.0 5.2 52 423-477 200-252 (485)
276 4dll_A 2-hydroxy-3-oxopropiona 23.7 69 0.0024 31.2 4.5 29 448-477 31-59 (320)
277 1g5t_A COB(I)alamin adenosyltr 23.6 56 0.0019 30.4 3.6 28 450-477 31-61 (196)
278 3r64_A NAD dependent benzaldeh 23.6 1.2E+02 0.0041 31.8 6.7 52 423-477 205-259 (508)
279 3m1r_A Formimidoylglutamase; s 23.6 83 0.0028 31.2 5.1 99 375-477 97-213 (322)
280 3n70_A Transport activator; si 23.0 45 0.0015 28.3 2.7 32 446-477 22-57 (145)
281 2f5t_X Archaeal transcriptiona 23.0 1.5E+02 0.0053 28.0 6.6 54 383-436 36-92 (233)
282 3pzl_A Agmatine ureohydrolase; 22.9 51 0.0017 32.8 3.3 95 376-477 94-201 (313)
283 2gks_A Bifunctional SAT/APS ki 22.8 1.5E+02 0.005 31.6 7.2 89 392-482 294-411 (546)
284 3rui_A Ubiquitin-like modifier 22.6 52 0.0018 33.3 3.4 33 448-481 34-68 (340)
285 1zq6_A Otcase, ornithine carba 22.6 1.6E+02 0.0055 30.0 7.0 92 392-483 80-233 (359)
286 3qks_C DNA double-strand break 22.6 17 0.00057 24.7 -0.2 24 371-394 2-25 (34)
287 3ug7_A Arsenical pump-driving 22.4 52 0.0018 32.6 3.4 34 447-480 24-63 (349)
288 4e21_A 6-phosphogluconate dehy 22.2 76 0.0026 31.9 4.6 28 449-477 23-50 (358)
289 1gu7_A Enoyl-[acyl-carrier-pro 21.7 1.6E+02 0.0056 28.6 6.8 34 444-477 164-197 (364)
290 2q9u_A A-type flavoprotein; fl 21.6 70 0.0024 31.9 4.1 24 454-477 267-290 (414)
291 3h8v_A Ubiquitin-like modifier 21.5 47 0.0016 32.7 2.8 36 448-484 36-73 (292)
292 2oqb_A Histone-arginine methyl 21.5 46 0.0016 28.8 2.3 56 395-462 11-73 (117)
293 4fvg_A Stomatin; mixed alpha-b 21.0 66 0.0023 27.5 3.3 38 366-404 76-114 (133)
294 2o2p_A Formyltetrahydrofolate 20.9 1.4E+02 0.0047 31.6 6.4 51 423-477 234-287 (517)
295 4ezb_A Uncharacterized conserv 20.9 91 0.0031 30.4 4.7 28 449-477 25-53 (317)
296 3eef_A N-carbamoylsarcosine am 20.8 4.3E+02 0.015 23.2 10.2 95 379-477 25-140 (182)
297 4dik_A Flavoprotein; TM0755, e 20.7 40 0.0014 34.6 2.2 24 454-477 276-299 (410)
298 3bfv_A CAPA1, CAPB2, membrane 20.7 1.1E+02 0.0037 29.2 5.1 33 445-477 79-116 (271)
299 2d8a_A PH0655, probable L-thre 20.7 1.3E+02 0.0045 29.2 5.9 34 449-483 169-206 (348)
300 3rss_A Putative uncharacterize 20.6 80 0.0027 33.5 4.5 39 439-477 42-84 (502)
301 3dfz_A SIRC, precorrin-2 dehyd 20.3 72 0.0025 30.1 3.7 30 447-477 30-59 (223)
302 3iwh_A Rhodanese-like domain p 20.2 1.2E+02 0.004 24.7 4.5 36 441-477 50-85 (103)
303 2h6e_A ADH-4, D-arabinose 1-de 20.2 2.8E+02 0.0097 26.7 8.2 62 418-483 125-210 (344)
304 2gpj_A Siderophore-interacting 20.2 1.4E+02 0.0046 27.9 5.6 94 372-474 115-217 (252)
305 3ed6_A Betaine aldehyde dehydr 20.1 1.5E+02 0.005 31.4 6.4 52 423-477 226-278 (520)
306 3s3t_A Nucleotide-binding prot 20.0 72 0.0025 26.2 3.3 27 381-407 18-44 (146)
No 1
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.76 E-value=0.023 Score=53.23 Aligned_cols=31 Identities=23% Similarity=0.403 Sum_probs=28.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
..|.|++||++|.+|++||..|.++| .+|..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~ 53 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQTL 53 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceEEE
Confidence 45789999999999999999999999 88887
No 2
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=94.53 E-value=0.033 Score=51.85 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||.+|+++|..|.++|.+|..
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~ 50 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVA 50 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEE
Confidence 56999999999999999999999999988
No 3
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=93.03 E-value=0.078 Score=50.90 Aligned_cols=30 Identities=20% Similarity=0.250 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+|+|..|+++|.+|.+
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~ 59 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVI 59 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999998
No 4
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=92.98 E-value=0.079 Score=50.49 Aligned_cols=29 Identities=34% Similarity=0.383 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|+++|..|+++|.+|.+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~ 58 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVL 58 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999998
No 5
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=92.71 E-value=0.08 Score=50.20 Aligned_cols=30 Identities=17% Similarity=0.402 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~ 51 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTIS 51 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999999999999999998
No 6
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=92.58 E-value=0.053 Score=51.85 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=32.1
Q ss_pred hhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 440 ILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.+..+-.-|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 26 ~~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~ 63 (279)
T 3ctm_A 26 VLDLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAI 63 (279)
T ss_dssp GGGGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEE
T ss_pred cccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 34444444578999999999999999999999999988
No 7
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=92.56 E-value=0.1 Score=50.10 Aligned_cols=30 Identities=27% Similarity=0.298 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+++|..|.++|.+|.+
T Consensus 21 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~ 50 (267)
T 1vl8_A 21 GRVALVTGGSRGLGFGIAQGLAEAGCSVVV 50 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999988
No 8
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=92.55 E-value=0.093 Score=49.82 Aligned_cols=30 Identities=23% Similarity=0.183 Sum_probs=27.3
Q ss_pred cceEEEeCCcc-hHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATS-KLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~-k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++| -+|+++|..|+++|.+|.+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~ 52 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVI 52 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEE
Confidence 36789999985 6999999999999999998
No 9
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=92.43 E-value=0.1 Score=50.24 Aligned_cols=29 Identities=34% Similarity=0.557 Sum_probs=27.7
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|+++|.+|.+
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~ 57 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVV 57 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999998
No 10
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=92.34 E-value=0.11 Score=50.11 Aligned_cols=29 Identities=31% Similarity=0.501 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|+|||..|+++|.+|.+
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~ 53 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYG 53 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999998
No 11
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=92.33 E-value=0.11 Score=50.12 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|++||..|.++|.+|.+
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~ 58 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFI 58 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 12
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.28 E-value=0.12 Score=49.90 Aligned_cols=30 Identities=37% Similarity=0.468 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|++||..|.++|.+|.+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~ 51 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFV 51 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 13
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.27 E-value=0.12 Score=49.56 Aligned_cols=29 Identities=28% Similarity=0.495 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~ 61 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVG 61 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999988
No 14
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=92.24 E-value=0.11 Score=50.32 Aligned_cols=30 Identities=37% Similarity=0.378 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+|||..|+++|.+|.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~ 57 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVAL 57 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 366899999999999999999999999998
No 15
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=92.21 E-value=0.092 Score=50.80 Aligned_cols=29 Identities=31% Similarity=0.410 Sum_probs=28.1
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~ 50 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVL 50 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 78999999999999999999999999998
No 16
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=92.19 E-value=0.12 Score=49.53 Aligned_cols=29 Identities=28% Similarity=0.361 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~ 50 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYT 50 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEE
Confidence 67899999999999999999999999988
No 17
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=92.13 E-value=0.13 Score=49.68 Aligned_cols=29 Identities=34% Similarity=0.470 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|+++|.+|.+
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~ 73 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVIC 73 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEE
Confidence 67999999999999999999999999998
No 18
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=92.13 E-value=0.12 Score=50.55 Aligned_cols=30 Identities=27% Similarity=0.393 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+++|..|+++|.+|.+
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~ 60 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVL 60 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 19
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.10 E-value=0.13 Score=49.34 Aligned_cols=29 Identities=24% Similarity=0.424 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|.++|.+|..
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~ 60 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVL 60 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999988
No 20
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=92.10 E-value=0.11 Score=50.31 Aligned_cols=30 Identities=27% Similarity=0.348 Sum_probs=27.9
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+|||..|+++|.+|.+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~G~~V~~ 62 (281)
T 4dry_A 33 GRIALVTGGGTGVGRGIAQALSAEGYSVVI 62 (281)
T ss_dssp -CEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999998
No 21
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=92.01 E-value=0.17 Score=48.85 Aligned_cols=36 Identities=22% Similarity=0.356 Sum_probs=30.7
Q ss_pred hcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 442 NELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 442 ~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+...-.-|-|++||++|=+|+++|..|+++|.+|.+
T Consensus 26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~ 61 (276)
T 3r1i_A 26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAV 61 (276)
T ss_dssp GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 333334478999999999999999999999999998
No 22
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=91.98 E-value=0.11 Score=49.72 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 21 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~ 50 (253)
T 2nm0_A 21 SRSVLVTGGNRGIGLAIARAFADAGDKVAI 50 (253)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 23
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=91.95 E-value=0.13 Score=49.54 Aligned_cols=30 Identities=30% Similarity=0.323 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+++|..|.++|.+|.+
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~ 56 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGL 56 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 24
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=91.90 E-value=0.13 Score=49.71 Aligned_cols=30 Identities=40% Similarity=0.568 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|++||..|+++|.+|..
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~ 57 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIG 57 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999998
No 25
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.88 E-value=0.12 Score=50.06 Aligned_cols=30 Identities=33% Similarity=0.357 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|++||..|+++|.+|.+
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~ 58 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLC 58 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999999999999999998
No 26
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=91.82 E-value=0.12 Score=49.39 Aligned_cols=31 Identities=32% Similarity=0.423 Sum_probs=28.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-|-|++||++|-+|+++|..|+++|.+|++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~ 58 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWI 58 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999988
No 27
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=91.64 E-value=0.14 Score=49.42 Aligned_cols=31 Identities=32% Similarity=0.435 Sum_probs=28.7
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-|-|++||++|-+|+++|..|.++|.+|.+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~ 55 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILI 55 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999998
No 28
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=91.60 E-value=0.15 Score=50.05 Aligned_cols=30 Identities=33% Similarity=0.519 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|++||..|.++|.+|.+
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~ 70 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAV 70 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 29
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=91.59 E-value=0.14 Score=48.90 Aligned_cols=30 Identities=27% Similarity=0.346 Sum_probs=27.8
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+++|..|+++|.+|.+
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGV 55 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999966
No 30
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=91.56 E-value=0.16 Score=49.02 Aligned_cols=29 Identities=24% Similarity=0.436 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|+++|.+|.+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~ 55 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVI 55 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999998
No 31
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=91.47 E-value=0.14 Score=49.57 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=28.8
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-|-|++||++|-+|+|+|..|+++|.+|.+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~ 62 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVIL 62 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999998
No 32
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=91.40 E-value=0.2 Score=48.44 Aligned_cols=31 Identities=26% Similarity=0.390 Sum_probs=28.9
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-|-|++||++|=+|+|+|..|+++|.+|.+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~ 56 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVV 56 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 4467999999999999999999999999998
No 33
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=91.35 E-value=0.11 Score=49.83 Aligned_cols=29 Identities=31% Similarity=0.473 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|+|||..|+++|.+|.+
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~ 56 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVII 56 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 67899999999999999999999999998
No 34
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=91.31 E-value=0.14 Score=50.12 Aligned_cols=31 Identities=19% Similarity=0.233 Sum_probs=28.9
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|++||+||-+|++++..|.++|.+|..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 54 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIG 54 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 4578999999999999999999999999988
No 35
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=91.28 E-value=0.17 Score=49.34 Aligned_cols=30 Identities=27% Similarity=0.280 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|+++|..|.++|.+|.+
T Consensus 34 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~ 63 (291)
T 3cxt_A 34 GKIALVTGASYGIGFAIASAYAKAGATIVF 63 (291)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 36
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=91.19 E-value=0.19 Score=48.45 Aligned_cols=29 Identities=31% Similarity=0.403 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|=+|+|||..|.++|.+|.+
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~ 56 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVI 56 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999998
No 37
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=91.17 E-value=0.13 Score=49.17 Aligned_cols=30 Identities=30% Similarity=0.360 Sum_probs=28.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+++|..|+++|.+|.+
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~ 54 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAV 54 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 366899999999999999999999999988
No 38
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=91.15 E-value=0.18 Score=48.87 Aligned_cols=30 Identities=40% Similarity=0.426 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|||..|.++|.+|.+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~ 57 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAADGVTVGA 57 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999998
No 39
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=91.13 E-value=0.17 Score=48.21 Aligned_cols=29 Identities=34% Similarity=0.482 Sum_probs=27.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|-+|+++|..|+++|.+|.+
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i 55 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGV 55 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999965
No 40
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.97 E-value=0.17 Score=49.37 Aligned_cols=29 Identities=28% Similarity=0.541 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++|=+|+++|..|.++|.+|.+
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~ 55 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTI 55 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999998
No 41
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=90.96 E-value=0.15 Score=48.05 Aligned_cols=30 Identities=37% Similarity=0.454 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|+++|..|.++|.+|..
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~G~~v~~ 50 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRRGASVVV 50 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 42
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=90.85 E-value=0.2 Score=48.41 Aligned_cols=30 Identities=40% Similarity=0.460 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+|||..|+++|.+|.+
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~~V~~ 60 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARAGAHVLA 60 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999998
No 43
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=90.71 E-value=0.23 Score=47.69 Aligned_cols=31 Identities=35% Similarity=0.460 Sum_probs=28.8
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-|-|++||++|-+|++||..|+++|.+|.+
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~ 57 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAV 57 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 4577999999999999999999999999987
No 44
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=90.70 E-value=0.17 Score=48.33 Aligned_cols=30 Identities=27% Similarity=0.389 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|+|..|+++|.+|.+
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~ 57 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDRNYRVVA 57 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999998
No 45
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.67 E-value=0.21 Score=49.09 Aligned_cols=35 Identities=31% Similarity=0.336 Sum_probs=30.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
|-++.||++|=+|+|||..|++.|.+|.+ ++|+-+
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~ 67 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLD 67 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 56899999999999999999999999999 444433
No 46
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.50 E-value=0.2 Score=48.71 Aligned_cols=29 Identities=28% Similarity=0.574 Sum_probs=27.7
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|+|||..|.++|.+|.+
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~ 76 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAI 76 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999988
No 47
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.40 E-value=0.23 Score=40.45 Aligned_cols=28 Identities=29% Similarity=0.353 Sum_probs=26.1
Q ss_pred ceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
+.|+++|+ |.+|+++|..|.++| .+|..
T Consensus 6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 6 WNICVVGA-GKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSEEEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCceEEE
Confidence 57999999 999999999999999 88877
No 48
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=90.38 E-value=0.19 Score=48.29 Aligned_cols=30 Identities=30% Similarity=0.323 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|+|..|+++|.+|.+
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~G~~V~~ 57 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAAGARVAV 57 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 49
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=90.18 E-value=0.21 Score=48.92 Aligned_cols=29 Identities=34% Similarity=0.550 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||-+|+++|..|.++|.+|..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~ 50 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVG 50 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999988
No 50
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=90.15 E-value=0.21 Score=48.23 Aligned_cols=29 Identities=38% Similarity=0.563 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|=+|+|||..|.++|.+|.+
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~ 52 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVI 52 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEE
Confidence 56899999999999999999999999988
No 51
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.14 E-value=0.25 Score=47.55 Aligned_cols=32 Identities=31% Similarity=0.334 Sum_probs=29.2
Q ss_pred CccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-.-|-|++||++|=+|+|||..|+++|.+|.+
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~ 60 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVAL 60 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 34577999999999999999999999999987
No 52
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=90.11 E-value=0.19 Score=50.68 Aligned_cols=30 Identities=33% Similarity=0.514 Sum_probs=28.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|-+|+|||..|.++|.+|++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl 74 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVI 74 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEE
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 53
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=90.07 E-value=0.2 Score=48.47 Aligned_cols=30 Identities=33% Similarity=0.454 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+++|..|+++|.+|.+
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~G~~V~~ 54 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKAGANIVL 54 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 54
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=89.84 E-value=0.21 Score=47.12 Aligned_cols=30 Identities=17% Similarity=0.330 Sum_probs=27.9
Q ss_pred cceEEEeCCcchHHHHHHHHhhccC---cEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKR---VRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~---~~v~~ 477 (487)
-|.|++||++|-+|+++|..|.++| .+|.+
T Consensus 21 ~k~vlITGasggIG~~la~~L~~~G~~~~~V~~ 53 (267)
T 1sny_A 21 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFT 53 (267)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEE
Confidence 3679999999999999999999999 99988
No 55
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.73 E-value=0.24 Score=48.45 Aligned_cols=30 Identities=20% Similarity=0.237 Sum_probs=28.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|++||+||-+|++++..|.++|.+|..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 56 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDGHEVTV 56 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999987
No 56
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=89.62 E-value=0.21 Score=48.83 Aligned_cols=31 Identities=13% Similarity=0.445 Sum_probs=27.7
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccC--cEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKR--VRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~--~~v~~ 477 (487)
.-+.|++||+||-+|++++.+|.++| ++|..
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEE
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEE
Confidence 34679999999999999999999999 88877
No 57
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=89.53 E-value=0.24 Score=47.61 Aligned_cols=30 Identities=33% Similarity=0.391 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|||..|+++|.+|.+
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGFTVVI 56 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEE
Confidence 467899999999999999999999999987
No 58
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=89.50 E-value=0.3 Score=47.16 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=28.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+++|..|+++|.+|.+
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~ 58 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAI 58 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEE
Confidence 366899999999999999999999999988
No 59
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.48 E-value=0.25 Score=49.13 Aligned_cols=29 Identities=28% Similarity=0.316 Sum_probs=27.7
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||-||+++|..|.++|.+|..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~ 57 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHG 57 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999987
No 60
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=89.44 E-value=0.26 Score=47.46 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|=+|+++|..|.++|.+|.+
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~ 58 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGCKVIV 58 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999988
No 61
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.38 E-value=0.27 Score=48.57 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=27.3
Q ss_pred ceEEEeCCcchHHHHHHHHhhcc-CcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRK-RVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~-~~~v~~ 477 (487)
+.|++||+||-+|++++.+|.++ |.+|..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~ 54 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFG 54 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEE
Confidence 57999999999999999999998 999888
No 62
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=89.31 E-value=0.26 Score=48.38 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||-+|+++|..|.++|.+|..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 56 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLDQKVVG 56 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999988
No 63
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=89.21 E-value=0.25 Score=49.10 Aligned_cols=29 Identities=34% Similarity=0.377 Sum_probs=27.7
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|++||..|+++|.+|.+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~ 75 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCL 75 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999988
No 64
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=89.08 E-value=0.33 Score=48.53 Aligned_cols=31 Identities=23% Similarity=0.205 Sum_probs=28.5
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|++||+||-+|++++..|.++|.+|..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 58 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIA 58 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEE
Confidence 3467999999999999999999999999987
No 65
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.05 E-value=0.33 Score=47.19 Aligned_cols=30 Identities=20% Similarity=0.201 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|++||++|-+|+|+|..|+++|.+|.+
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i 148 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVL 148 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEE
Confidence 378999999999999999999999999887
No 66
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=89.03 E-value=0.28 Score=48.62 Aligned_cols=29 Identities=28% Similarity=0.335 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||-+|+++|..|.++|.+|..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~ 53 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHG 53 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999987
No 67
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=88.88 E-value=0.3 Score=47.52 Aligned_cols=29 Identities=31% Similarity=0.489 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++|-+|+++|..|.++|.+|.+
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~ 78 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAI 78 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEE
Confidence 67999999999999999999999999988
No 68
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=88.86 E-value=0.28 Score=47.21 Aligned_cols=29 Identities=21% Similarity=0.313 Sum_probs=27.4
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||++ |-+|+++|..|+++|.+|.+
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~ 52 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAF 52 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEE
Confidence 568999999 89999999999999999998
No 69
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=88.63 E-value=0.34 Score=49.38 Aligned_cols=29 Identities=10% Similarity=0.353 Sum_probs=27.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
+.|++||+||-+|+++|..|+++| .+|..
T Consensus 36 k~vLVTGatG~IG~~l~~~L~~~g~~~V~~ 65 (399)
T 3nzo_A 36 SRFLVLGGAGSIGQAVTKEIFKRNPQKLHV 65 (399)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTCCSEEEE
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCCEEEE
Confidence 679999999999999999999999 68887
No 70
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.44 E-value=0.3 Score=48.60 Aligned_cols=29 Identities=14% Similarity=0.437 Sum_probs=27.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhcc-Cc-EEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRK-RV-RVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~-~~-~v~~ 477 (487)
+.|++||+||-+|+++|..|.++ |. +|..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~ 52 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIV 52 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEE
Confidence 67999999999999999999999 98 8887
No 71
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=88.37 E-value=0.34 Score=47.15 Aligned_cols=30 Identities=33% Similarity=0.504 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|+|..|+++|.+|.+
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~ 57 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIA 57 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 367999999999999999999999999998
No 72
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.29 E-value=0.37 Score=46.91 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=27.7
Q ss_pred cceEEEeCCcc--hHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATS--KLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~--k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++| =+|++||..|+++|.+|.+
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~ 61 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVAL 61 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEE
Confidence 46799999997 7999999999999999998
No 73
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.07 E-value=0.39 Score=46.75 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=27.6
Q ss_pred cceEEEeCCcch--HHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k--~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|- +|+|+|..|.++|.+|.+
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~ 62 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAF 62 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEE
Confidence 367999999976 999999999999999998
No 74
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.93 E-value=0.36 Score=47.58 Aligned_cols=30 Identities=30% Similarity=0.434 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|++||..|.++|.+|++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~ 75 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVA 75 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEE
Confidence 367899999999999999999999999988
No 75
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.50 E-value=0.4 Score=47.78 Aligned_cols=29 Identities=17% Similarity=0.213 Sum_probs=27.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
+.|++||+||-+|+++|..|.++| .+|..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~ 62 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHV 62 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEE
Confidence 579999999999999999999999 99887
No 76
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=87.44 E-value=0.37 Score=48.98 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=28.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|++||+||-+|+++|..|.++|.+|..
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~ 98 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYC 98 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEE
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEE
Confidence 4568999999999999999999999999987
No 77
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=87.18 E-value=0.34 Score=47.68 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=26.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
+.|++||+||-+|+++|..|.++| .+|..
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~ 76 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILV 76 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEE
Confidence 569999999999999999999999 88877
No 78
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=86.98 E-value=0.4 Score=46.67 Aligned_cols=29 Identities=31% Similarity=0.497 Sum_probs=27.0
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc---EEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV---RVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~---~v~~ 477 (487)
|-|++||++|=+|+|+|..|+++|. +|.+
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~ 65 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLIL 65 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEE
Confidence 6799999999999999999999987 8888
No 79
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=86.88 E-value=0.43 Score=47.00 Aligned_cols=30 Identities=37% Similarity=0.471 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|=+|+|||..|+++|.+|.+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~ 56 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVV 56 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999998
No 80
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=86.79 E-value=0.44 Score=45.79 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=26.8
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
|-|++||++ +=+|++||..|.++|.+|.+
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~ 57 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAF 57 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEE
Confidence 679999999 55999999999999999998
No 81
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=86.51 E-value=0.47 Score=50.00 Aligned_cols=29 Identities=28% Similarity=0.362 Sum_probs=27.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++||+||-||++++..|.++|.+|..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~ 176 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQ 176 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 57999999999999999999999999988
No 82
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=85.15 E-value=1.1 Score=39.05 Aligned_cols=36 Identities=22% Similarity=0.312 Sum_probs=30.0
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|.+.|+ |.+|+.+|..|.++|.+|.+ ++++.+
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~ 56 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFH 56 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGG
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 3468999996 99999999999999999988 455544
No 83
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=84.09 E-value=0.75 Score=48.20 Aligned_cols=32 Identities=25% Similarity=0.223 Sum_probs=29.2
Q ss_pred CccceEEEeCCcchHHHHHHHHhhc-cCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCR-KRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~-~~~~v~~ 477 (487)
++-|-|+.||++|=+|+|||..|++ .|.+|++
T Consensus 59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~ 91 (422)
T 3s8m_A 59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLG 91 (422)
T ss_dssp SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEE
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEE
Confidence 4457789999999999999999999 9999987
No 84
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=83.82 E-value=0.48 Score=49.45 Aligned_cols=31 Identities=42% Similarity=0.621 Sum_probs=28.8
Q ss_pred ccceEEEeCCcchHHHHHHHHhhcc---CcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRK---RVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~---~~~v~~ 477 (487)
.-+.|++||+||-+|++++..|.++ |.+|..
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~ 105 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLIC 105 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEE
Confidence 4578999999999999999999999 899988
No 85
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=83.76 E-value=0.8 Score=47.76 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.4
Q ss_pred CCccceEEEeCCcchHHHHHHHHhhc-cCcEEEe
Q 011375 445 PKDVKEVFLTGATSKLGRAIALYLCR-KRVRVLK 477 (487)
Q Consensus 445 p~~~~~v~l~g~~~k~~~a~a~~lc~-~~~~v~~ 477 (487)
.++-|-++.||++|=+|+|||..|++ .|.+|+.
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~ 77 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLG 77 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEE
Confidence 45778899999999999999999999 9999987
No 86
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=82.68 E-value=0.67 Score=48.45 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=28.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.+.|++||+||-||++++..|.++|.+|..
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~ 179 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYC 179 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEE
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEE
Confidence 3478999999999999999999999999988
No 87
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=82.22 E-value=0.96 Score=47.32 Aligned_cols=30 Identities=30% Similarity=0.380 Sum_probs=28.2
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-+++||++|-+|++||..|+++|.+|++
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl 242 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVA 242 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEE
Confidence 467999999999999999999999999988
No 88
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=80.81 E-value=1.2 Score=46.46 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=29.0
Q ss_pred CccceEEEeCCcchHHHH--HHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRA--IALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a--~a~~lc~~~~~v~~ 477 (487)
.+-|-|+.||++|=+|+| ||++|.++|.+|++
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~ 91 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIG 91 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEE
Confidence 456789999999999999 99999999999977
No 89
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=80.40 E-value=1.4 Score=42.91 Aligned_cols=42 Identities=24% Similarity=0.278 Sum_probs=32.5
Q ss_pred CchhhHHhhhcC-----CCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 433 NTCTAAVILNEL-----PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 433 ~~l~~a~v~~~i-----p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|| +.+.+.+.+ +-.-+.|+++|++ -+|+|+|.+|+++| +|.+
T Consensus 109 nT-d~~G~~~~L~~~~~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v 155 (287)
T 1nvt_A 109 NT-DGIGARMALEEEIGRVKDKNIVIYGAG-GAARAVAFELAKDN-NIII 155 (287)
T ss_dssp CC-HHHHHHHHHHHHHCCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEE
T ss_pred cC-CHHHHHHHHHHhCCCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEE
Confidence 55 444444443 3344789999996 99999999999999 9998
No 90
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=79.31 E-value=1.5 Score=44.04 Aligned_cols=46 Identities=17% Similarity=0.142 Sum_probs=33.0
Q ss_pred cCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 431 HGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 431 ~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
||..+..+.--+.+.-.-|.|+++|+ |-.|||+|.+|++.|+ +|.+
T Consensus 131 D~~Gf~~~L~~~~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v 177 (312)
T 3t4e_A 131 DGTGHIRAIKESGFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKL 177 (312)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHhcCCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEE
Confidence 33344444322234445578999998 7899999999999999 7877
No 91
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=79.29 E-value=1.7 Score=42.00 Aligned_cols=30 Identities=23% Similarity=0.197 Sum_probs=27.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+++|+ |-+|+|+|.+|++.|.+|.+
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v 147 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTI 147 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEE
Confidence 4578999998 67999999999999999988
No 92
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=78.32 E-value=1.4 Score=42.77 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=27.9
Q ss_pred CCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 445 PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 445 p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-.-+.|.++|+ |.+|||+|.+|++.|.+|.+
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v 147 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVL 147 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEE
Confidence 334578999998 67999999999999999988
No 93
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=77.85 E-value=1.6 Score=45.36 Aligned_cols=32 Identities=19% Similarity=0.223 Sum_probs=28.4
Q ss_pred CccceEEEeCCcchHHHHHHHHhh-ccCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLC-RKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc-~~~~~v~~ 477 (487)
.+-|.|+.||++|.+|+|+|.+|. +.|-.|+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~ 80 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIG 80 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEE
Confidence 356889999999999999999998 67888877
No 94
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=77.69 E-value=2.3 Score=46.04 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=27.0
Q ss_pred ceEEEeCCcchHHHHHHHHhhcc-CcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRK-RVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~-~~~v~~ 477 (487)
+.|++||+||-+|++++..|.++ |.+|..
T Consensus 316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~ 345 (660)
T 1z7e_A 316 TRVLILGVNGFIGNHLTERLLREDHYEVYG 345 (660)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSSSEEEEE
T ss_pred ceEEEEcCCcHHHHHHHHHHHhcCCCEEEE
Confidence 57999999999999999999998 899887
No 95
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=77.31 E-value=2.8 Score=37.62 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=28.0
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|++++..+.++|.+|..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~ 68 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYT 68 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEE
Confidence 3467999999999999999999999999987
No 96
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=75.89 E-value=1.3 Score=38.18 Aligned_cols=29 Identities=24% Similarity=0.375 Sum_probs=26.6
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|.+.|+ |.+|+++|.+|+++|.+|.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v 49 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTV 49 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence 678999996 99999999999999999777
No 97
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=75.85 E-value=2.5 Score=41.67 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=28.2
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
+.-.-+.|.+.|+ |.+|+++|.+|++.|+ +|.+
T Consensus 137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v 170 (297)
T 2egg_A 137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDM 170 (297)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEE
Confidence 4434578999998 6799999999999998 8888
No 98
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=75.73 E-value=1.8 Score=46.90 Aligned_cols=30 Identities=30% Similarity=0.472 Sum_probs=28.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|-++.||+++=+|+|+|..|.++|.+|.+
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~ 351 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVV 351 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEE
Confidence 367899999999999999999999999998
No 99
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=75.04 E-value=1.6 Score=45.93 Aligned_cols=30 Identities=33% Similarity=0.520 Sum_probs=26.9
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcE-EEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVR-VLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~-v~~ 477 (487)
-+.|++||++|-+|+++|..|.++|.+ |++
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl 256 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLL 256 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEE
Confidence 467999999999999999999999996 665
No 100
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=74.91 E-value=2.6 Score=41.42 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=26.8
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.-|.|+++|+ |-+|||+|.+|++.|+ +|.+
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE
Confidence 4578999998 7899999999999999 6887
No 101
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=74.61 E-value=2.2 Score=45.39 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=26.8
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcE-EEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVR-VLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~-v~~ 477 (487)
-+.|++||++|-+|+++|..|.++|.+ |++
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl 289 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVL 289 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEE
Confidence 467999999999999999999999994 665
No 102
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=74.25 E-value=2.7 Score=42.08 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=28.2
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
+.-.-|.|+++|+ |-+|||||.+|++.|+ +|.+
T Consensus 150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i 183 (315)
T 3tnl_A 150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISI 183 (315)
T ss_dssp CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEE
T ss_pred CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEE
Confidence 3334578999998 7999999999999999 8887
No 103
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=73.45 E-value=3.1 Score=40.84 Aligned_cols=32 Identities=16% Similarity=0.144 Sum_probs=27.5
Q ss_pred CCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 445 PKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 445 p~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.-.-+.|+++|+ |-.|||+|.+|++.|+ +|.+
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v 155 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITV 155 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEE
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEE
Confidence 334578999998 6799999999999997 8887
No 104
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=73.09 E-value=1.8 Score=46.00 Aligned_cols=92 Identities=22% Similarity=0.334 Sum_probs=30.1
Q ss_pred hhhhhHHHHHHHHHHHhhcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHHhhhcC----------CC
Q 011375 377 AQTGINKQIEDAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNEL----------PK 446 (487)
Q Consensus 377 ~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v~~~i----------p~ 446 (487)
...-+++-+.+.=+ -++.|+.|+++- ++|+.. .|+-..++--|++|....=-+++ ++
T Consensus 281 ~s~l~G~~l~el~~-~~~~~~~vi~i~---------r~g~~~---~p~~~~~l~~GD~L~v~g~~~~l~~~~~~~~~~~~ 347 (565)
T 4gx0_A 281 GTPFAGKTIGESGI-RQRTGLSIIGVW---------ERGSLT---TPQRETVLTEQSLLVLAGTKSQLAALEYLIGEAPE 347 (565)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred CCccCCCCHHHcCc-chhcCCEEEEEE---------ECCEEe---CCCCCcEeCCCCEEEEEeCHHHHHHHHHHhcCCCC
Confidence 34444555555422 234577776552 345554 56666666677777654322222 22
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
. +.|.+.|. |++|+.+|..|.++|+.|.+ ++|+.+
T Consensus 348 ~-~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 348 D-ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVC 385 (565)
T ss_dssp C-CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSC
T ss_pred C-CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHh
Confidence 3 78999998 89999999999999999999 555443
No 105
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=72.03 E-value=3.1 Score=44.12 Aligned_cols=29 Identities=24% Similarity=0.399 Sum_probs=26.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
+.|++||++|-+|+++|..|.++|. +|++
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl 269 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVL 269 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEE
Confidence 6799999999999999999999999 5555
No 106
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=71.30 E-value=3.3 Score=40.45 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=26.7
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.-|.|+++|+ |-.|||+|.+|++.|+ +|.+
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i 149 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVI 149 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEE
Confidence 4578999998 6899999999999997 8887
No 107
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=71.07 E-value=9.8 Score=38.19 Aligned_cols=68 Identities=22% Similarity=0.275 Sum_probs=40.5
Q ss_pred cchhhhhHHHHHHHHHHHhhcCCe-EEEecccccccccccCce-eeeecCCCCceEEecCCchhhHHhhhcCCCccceEE
Q 011375 375 PFAQTGINKQIEDAILRADRLGVK-VLSLAALNKNESLNGGGT-LFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVF 452 (487)
Q Consensus 375 ~~~~~~in~~ie~ai~~a~~~g~k-v~sl~~ln~~~~ln~~g~-l~~~~~p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~ 452 (487)
|.+.+.|=..|++.+...+..|-| |+ .-.||| -.++++| ||.++-
T Consensus 15 p~~~~~i~~~i~~~~~~~~l~gk~~VL----------ITaGgT~EpID~Dp---VRfItN-------------------- 61 (313)
T 1p9o_A 15 PPGAARWAEVMARFAARLGAQGRRVVL----------VTSGGTKVPLEARP---VRFLDN-------------------- 61 (313)
T ss_dssp -----CHHHHHHHHHHHHHHTTCCEEE----------EEESBCEEESSSSC---SEEEEE--------------------
T ss_pred cccHHHHHHHHHHHhhhhhhcCCeEEE----------EeCCCcccccCCCc---eeEecC--------------------
Confidence 556666667777776655555655 32 123343 2333344 554332
Q ss_pred EeCCcchHHHHHHHHhhccCcEEEe
Q 011375 453 LTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 453 l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+|||.|.|+|.++.++|.+|..
T Consensus 62 --~SSGkmG~aiAe~~~~~Ga~V~l 84 (313)
T 1p9o_A 62 --FSSGRRGATSAEAFLAAGYGVLF 84 (313)
T ss_dssp --CCCCHHHHHHHHHHHHTTCEEEE
T ss_pred --CCCcHHHHHHHHHHHHCCCEEEE
Confidence 23499999999999999999998
No 108
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.13 E-value=3.1 Score=37.00 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=28.3
Q ss_pred ceEEEeCCcchHHHHHHHHhhcc-CcEEEe---chhhhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRK-RVRVLK---DSRKFR 483 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~-~~~v~~---~~~~~~ 483 (487)
+.|.+.| .|++|+.+|..|.++ |.+|.+ ++++.+
T Consensus 40 ~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~ 77 (183)
T 3c85_A 40 AQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQ 77 (183)
T ss_dssp CSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHH
T ss_pred CcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHH
Confidence 4789999 599999999999999 999988 555443
No 109
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=68.48 E-value=2.8 Score=44.67 Aligned_cols=30 Identities=27% Similarity=0.203 Sum_probs=26.5
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+-|++||++|-||+++|.+|.++|.++++
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vv 280 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLL 280 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEE
Confidence 367999999999999999999999998443
No 110
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=68.39 E-value=3.2 Score=39.78 Aligned_cols=21 Identities=33% Similarity=0.363 Sum_probs=19.8
Q ss_pred cchHHHHHHHHhhccCcEEEe
Q 011375 457 TSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 457 ~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+||+|+|||.+|.++|.+|.+
T Consensus 33 Sg~iG~aiA~~~~~~Ga~V~l 53 (226)
T 1u7z_A 33 SGKMGFAIAAAAARRGANVTL 53 (226)
T ss_dssp CSHHHHHHHHHHHHTTCEEEE
T ss_pred ccHHHHHHHHHHHHCCCEEEE
Confidence 489999999999999999987
No 111
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=67.88 E-value=3.2 Score=40.74 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=27.4
Q ss_pred CCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 445 PKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 445 p~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.-.-|.|+++|+ |-.|||+|.+|.+.|+ +|.+
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEE
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEE
Confidence 334578999997 7899999999999999 7887
No 112
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=67.00 E-value=4.3 Score=37.58 Aligned_cols=30 Identities=20% Similarity=0.345 Sum_probs=25.9
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
..+.|.+.| +|.+|+++|..|.+.|.+|..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~ 56 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVV 56 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEE
Confidence 445789999 899999999999999999888
No 113
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=65.99 E-value=15 Score=36.16 Aligned_cols=83 Identities=17% Similarity=0.145 Sum_probs=54.2
Q ss_pred hcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHHh-----------h-hcC-CCccceEEEeCCcchH
Q 011375 394 RLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVI-----------L-NEL-PKDVKEVFLTGATSKL 460 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v-----------~-~~i-p~~~~~v~l~g~~~k~ 460 (487)
+-|=+|+.++ .+|+=.=|+.-.++.=+++=++-+...|+. + +.. .+.-+.|+.+|++|=+
T Consensus 100 ~vGDrV~~~~-------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~i 172 (342)
T 4eye_A 100 KPGDRVMAFN-------FIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGI 172 (342)
T ss_dssp CTTCEEEEEC-------SSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHH
T ss_pred CCCCEEEEec-------CCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHH
Confidence 4566776652 234434466555555566667777654421 2 222 2344679999999999
Q ss_pred HHHHHHHhhccCcEEEe---chhhhh
Q 011375 461 GRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 461 ~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
|.+.+..+...|.+|.. ++++-+
T Consensus 173 G~~~~~~a~~~Ga~Vi~~~~~~~~~~ 198 (342)
T 4eye_A 173 GTAAIQIAKGMGAKVIAVVNRTAATE 198 (342)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 99999999999999988 455443
No 114
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=65.97 E-value=27 Score=32.13 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=29.2
Q ss_pred hhhcCCCccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 440 ILNELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 v~~~ip~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|++ .++++|+++|-. +=-=.+.|+.+.++|++|.+
T Consensus 120 ~L~~--~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~v 156 (204)
T 3hu5_A 120 LLRR--RGVDTLLVSGTQYPNCIRGTAVDAFALDYDVVV 156 (204)
T ss_dssp HHHH--TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHh--CCCCeEEEeeeccchHHHHHHHHHHHCCCEEEE
Confidence 4444 389999999988 44457888999999999998
No 115
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=65.81 E-value=4.9 Score=39.61 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=28.8
Q ss_pred cCCCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 443 ELPKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 443 ~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.++..-+.|++.|+ |-.|||+|.+|.+.|+ +|.+
T Consensus 117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v 151 (282)
T 3fbt_A 117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYV 151 (282)
T ss_dssp TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEE
T ss_pred CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEE
Confidence 45555678999998 5789999999999999 8887
No 116
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=65.68 E-value=9.3 Score=37.26 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=28.7
Q ss_pred CccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.-+.|+.+|++|-+|++++..+.++|.+|..
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~ 175 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVG 175 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEE
Confidence 34467999999999999999999999999988
No 117
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=65.57 E-value=6.8 Score=38.55 Aligned_cols=37 Identities=22% Similarity=0.162 Sum_probs=30.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+|++|-+|.+++..+.++|.+|.. ++++-+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~ 205 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR 205 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3467999999999999999999999999987 444433
No 118
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=64.76 E-value=3.5 Score=43.83 Aligned_cols=28 Identities=32% Similarity=0.386 Sum_probs=24.5
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.|++||+ |-+|||+|.+|+++|.+|.+
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i 392 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKGAKVVI 392 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHCC-CEE
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEE
Confidence 57999999 59999999999999999988
No 119
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=64.76 E-value=7.4 Score=37.96 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=31.0
Q ss_pred CccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
+.-+.|+.+|++|-+|.+.+..+..+|.+|.. ++++-+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 179 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA 179 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 34467999999999999999999999999987 444433
No 120
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=64.42 E-value=7 Score=38.22 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=28.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|.+++..+.++|.+|..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~ 175 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIG 175 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999988
No 121
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=62.75 E-value=17 Score=35.64 Aligned_cols=67 Identities=10% Similarity=0.087 Sum_probs=45.1
Q ss_pred eeeeecCC-CCceEEecCCchhhHHh--------hh---cC-CCccceEEEeCCcchHHHHHHHHhhcc-CcEEEe---c
Q 011375 416 TLFVDKHP-NLKVRVVHGNTCTAAVI--------LN---EL-PKDVKEVFLTGATSKLGRAIALYLCRK-RVRVLK---D 478 (487)
Q Consensus 416 ~l~~~~~p-~l~~rvv~g~~l~~a~v--------~~---~i-p~~~~~v~l~g~~~k~~~a~a~~lc~~-~~~v~~---~ 478 (487)
.=|+.-.. +.=+++ ++-+...|+- ++ .. .+.-+.|+.+|++|-+|.+++..+.++ |.+|.. +
T Consensus 127 aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~ 205 (347)
T 1jvb_A 127 AEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR 205 (347)
T ss_dssp BSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS
T ss_pred eeEEEecCccceEEe-CCCCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC
Confidence 33554445 556777 8766653331 11 11 233467999999999999999999999 999987 4
Q ss_pred hhhhh
Q 011375 479 SRKFR 483 (487)
Q Consensus 479 ~~~~~ 483 (487)
+++-+
T Consensus 206 ~~~~~ 210 (347)
T 1jvb_A 206 EEAVE 210 (347)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 122
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=62.62 E-value=9.3 Score=37.39 Aligned_cols=37 Identities=14% Similarity=0.232 Sum_probs=30.6
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+|++|-+|.+++..+.++|.+|.. ++++-+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~ 194 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVD 194 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3467999999999999999999999999987 444443
No 123
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=61.64 E-value=9.4 Score=37.12 Aligned_cols=31 Identities=6% Similarity=0.132 Sum_probs=28.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|.+++..+.++|.+|..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~ 170 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIG 170 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence 3468999999999999999999999999988
No 124
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=61.46 E-value=12 Score=37.08 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=52.9
Q ss_pred hcCCeEEEecccccccccccCceeeeec-CCCCceEEecCCchhh-------HHhhhcC-CCccceEEEeCCcchHHHHH
Q 011375 394 RLGVKVLSLAALNKNESLNGGGTLFVDK-HPNLKVRVVHGNTCTA-------AVILNEL-PKDVKEVFLTGATSKLGRAI 464 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~~ln~~g~l~~~~-~p~l~~rvv~g~~l~~-------a~v~~~i-p~~~~~v~l~g~~~k~~~a~ 464 (487)
-.|+|+++-.- + |..|.+.+.- .-..-.=++||+.||+ |+-...+ +++.+.|.+.| +|..|++.
T Consensus 64 ~~g~K~~~~~p---~---n~~~~v~L~d~~tG~p~a~ld~~~lT~~RTaA~s~laa~~La~~~~~~v~iIG-aG~~a~~~ 136 (313)
T 3hdj_A 64 VAGAKVYTTIK---G---QFQFVILLFSAADGRPLATCDAGTLTRKRTAACTVLAAGALARPRSSVLGLFG-AGTQGAEH 136 (313)
T ss_dssp EEEEEEEEEET---T---EEEEEEEEEETTTCCEEEEECSHHHHHHHHHHHHHHHHHHHSCTTCCEEEEEC-CSHHHHHH
T ss_pred eeEEEEeecCC---C---CceEEEEEEECCCCCEEEEEcCchhhhHHHHHHHHHHHHhhccCCCcEEEEEC-ccHHHHHH
Confidence 46999988642 1 3445555432 3344566899999985 2233333 78899999999 67899999
Q ss_pred HHHhhc-cCc-EEEe
Q 011375 465 ALYLCR-KRV-RVLK 477 (487)
Q Consensus 465 a~~lc~-~~~-~v~~ 477 (487)
+.+|++ +++ +|.+
T Consensus 137 ~~al~~~~~~~~V~v 151 (313)
T 3hdj_A 137 AAQLSARFALEAILV 151 (313)
T ss_dssp HHHHHHHSCCCEEEE
T ss_pred HHHHHHhCCCcEEEE
Confidence 999996 344 5666
No 125
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=61.38 E-value=11 Score=36.88 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=31.5
Q ss_pred CccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
+.-+.|+.+|++|-+|.+++..+.++|.+|.. ++++-+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 188 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCR 188 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 34468999999999999999999999999988 455444
No 126
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=60.80 E-value=16 Score=36.25 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=28.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|.+++..+.++|.+|..
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~ 200 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILG 200 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEE
Confidence 3467999999999999999999999999987
No 127
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=60.28 E-value=17 Score=34.93 Aligned_cols=75 Identities=21% Similarity=0.212 Sum_probs=47.4
Q ss_pred CCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHH-h----------hh-cCCCccceEEEeCCcchHHHH
Q 011375 396 GVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAV-I----------LN-ELPKDVKEVFLTGATSKLGRA 463 (487)
Q Consensus 396 g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~-v----------~~-~ip~~~~~v~l~g~~~k~~~a 463 (487)
|=+|.... -+|+=.=|+.-..+.=+++=++-+...|+ + +. ...+.-+.|+.+|++|-+|.+
T Consensus 69 GdrV~~~~-------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~G~vG~~ 141 (302)
T 1iz0_A 69 GRRYAALV-------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTA 141 (302)
T ss_dssp TEEEEEEC-------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHH
T ss_pred CcEEEEec-------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCEEEEECCCcHHHHH
Confidence 77787653 12332334433334445565665554221 1 11 114445689999999999999
Q ss_pred HHHHhhccCcEEEe
Q 011375 464 IALYLCRKRVRVLK 477 (487)
Q Consensus 464 ~a~~lc~~~~~v~~ 477 (487)
++..+..+|.+|..
T Consensus 142 ~~~~a~~~Ga~Vi~ 155 (302)
T 1iz0_A 142 AVQVARAMGLRVLA 155 (302)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHHCCCEEEE
Confidence 99988899999988
No 128
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=60.12 E-value=25 Score=34.14 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=28.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|.+.+..+..+|.+|..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~ 178 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIA 178 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 4467999999999999999999999999988
No 129
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=58.88 E-value=21 Score=35.42 Aligned_cols=92 Identities=23% Similarity=0.272 Sum_probs=68.6
Q ss_pred HhhcCCeEEEec----cccccccc-------ccCc-eeeeecCCC-----------CceEEec-CCch--------h-hH
Q 011375 392 ADRLGVKVLSLA----ALNKNESL-------NGGG-TLFVDKHPN-----------LKVRVVH-GNTC--------T-AA 438 (487)
Q Consensus 392 a~~~g~kv~sl~----~ln~~~~l-------n~~g-~l~~~~~p~-----------l~~rvv~-g~~l--------~-~a 438 (487)
+.+.|..|+.|+ -++|+|.+ ++.| -..|-|||+ .+|-|++ |++- + ..
T Consensus 56 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~~D~iviR~~~~~~~~~~la~~~~vPVINAG~g~~~HPtQaLaDl~ 135 (291)
T 3d6n_B 56 ARELGIETYLVSGSESSTVKGESFFDTLKTFEGLGFDYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFF 135 (291)
T ss_dssp HHHTTCEEEEEETTTTSCCTTCCHHHHHHHHHHTTCSEEEEEESSCCCSCHHHHHTCSSEEEEEEETTTBCHHHHHHHHH
T ss_pred HHHhCCeEEEECCccCcccCCCcHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHhCCCCEEeCccCCCcCcHHHHHHHH
Confidence 567899999996 45788875 6777 888888873 4788999 7642 2 12
Q ss_pred HhhhcCCC-ccceEEEeCC--cchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 439 VILNELPK-DVKEVFLTGA--TSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 439 ~v~~~ip~-~~~~v~l~g~--~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.|..+..+ +=..|-+.|. .|-+++..+..|++-|++|.+ +.+.|+
T Consensus 136 Ti~e~~g~l~gl~va~vGDl~~~rva~Sl~~~~~~~g~~v~~~~P~~~~ 184 (291)
T 3d6n_B 136 TIKEHFGEVKDLRVLYVGDIKHSRVFRSGAPLLNMFGAKIGVCGPKTLI 184 (291)
T ss_dssp HHHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGS
T ss_pred HHHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEECCchhC
Confidence 34444432 2246888999 699999999999999999999 777764
No 130
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=58.81 E-value=7.3 Score=35.72 Aligned_cols=70 Identities=16% Similarity=0.117 Sum_probs=47.4
Q ss_pred cccccchhhhhHHHHHHHHHHHhhcCCeEEEeccccccccc--------c--cCceeeeecCCCCceEEecCCchhhHHh
Q 011375 371 QYFLPFAQTGINKQIEDAILRADRLGVKVLSLAALNKNESL--------N--GGGTLFVDKHPNLKVRVVHGNTCTAAVI 440 (487)
Q Consensus 371 ~y~~~~~~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~~~l--------n--~~g~l~~~~~p~l~~rvv~g~~l~~a~v 440 (487)
+=++=+...+.|..+-+..++|+++|++|+++-.+-..++. | ..|.+ -.|+-. |+.-.+|+|++.|
T Consensus 79 D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~~~~~~L~d~an~~p~gll---~~e~g~-r~g~~Sti~~~~i 154 (170)
T 3jx9_A 79 DRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAPLALKFDKGLL---PAEDGS-RHGLPSLALGAFL 154 (170)
T ss_dssp CEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEESSCCCTTGGGSSSCEECCCCSCSE---ECTTSC-EECCCHHHHHHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeCcchhccccCcHHHHHhCCCCCce---ECCCCC-EechhHHHHHHHH
Confidence 33444556677998899999999999999999884444442 1 12221 123333 8888888888888
Q ss_pred hhcC
Q 011375 441 LNEL 444 (487)
Q Consensus 441 ~~~i 444 (487)
+|.|
T Consensus 155 ~~~i 158 (170)
T 3jx9_A 155 LTHI 158 (170)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8766
No 131
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=58.81 E-value=14 Score=35.55 Aligned_cols=33 Identities=21% Similarity=0.313 Sum_probs=27.8
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.-.-+.|.+.|+ |.+|+++|..|.+.|++|.+
T Consensus 125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v 157 (275)
T 2hk9_A 125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFL 157 (275)
T ss_dssp TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEE
T ss_pred CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEE
Confidence 3334568999996 78999999999999999888
No 132
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=58.57 E-value=11 Score=37.02 Aligned_cols=39 Identities=28% Similarity=0.340 Sum_probs=32.0
Q ss_pred HhhhcCCCc-cceEEEeCCc--ch--HHHHHHHHhh-ccCcEEEe
Q 011375 439 VILNELPKD-VKEVFLTGAT--SK--LGRAIALYLC-RKRVRVLK 477 (487)
Q Consensus 439 ~v~~~ip~~-~~~v~l~g~~--~k--~~~a~a~~lc-~~~~~v~~ 477 (487)
..+++.|++ -+-|+|+|.+ || +++|||..+| ++|.+|..
T Consensus 142 ~~i~~~~~~~~~~lll~G~~GtGKT~La~aia~~~~~~~g~~v~~ 186 (308)
T 2qgz_A 142 DFVEQYPSAEQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTL 186 (308)
T ss_dssp HHHHHCSCSSCCEEEEECSTTSSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred HHHHhccccCCceEEEECCCCCCHHHHHHHHHHHHHHhcCCcEEE
Confidence 355666654 5789999998 88 8999999999 99999875
No 133
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=58.21 E-value=22 Score=34.30 Aligned_cols=72 Identities=18% Similarity=0.165 Sum_probs=46.6
Q ss_pred ccCceeeeecCCCCceEEecCCchhhH-----------Hhhhc-----CCCccceEEEeCCcchHHHHHHHHhhccCcEE
Q 011375 412 NGGGTLFVDKHPNLKVRVVHGNTCTAA-----------VILNE-----LPKDVKEVFLTGATSKLGRAIALYLCRKRVRV 475 (487)
Q Consensus 412 n~~g~l~~~~~p~l~~rvv~g~~l~~a-----------~v~~~-----ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v 475 (487)
+|+=.=|+.-..+.=+++=++-+...| .-++. +.++-.+|+.+|++|-+|.+.+..+..+|.+|
T Consensus 95 ~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga~V 174 (324)
T 3nx4_A 95 WGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQV 174 (324)
T ss_dssp CCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCE
T ss_pred CCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCCEE
Confidence 343344555455556677677664433 22332 22232249999999999999998888999999
Q ss_pred Ee---chhhhh
Q 011375 476 LK---DSRKFR 483 (487)
Q Consensus 476 ~~---~~~~~~ 483 (487)
.. ++++-+
T Consensus 175 i~~~~~~~~~~ 185 (324)
T 3nx4_A 175 AAVSGRESTHG 185 (324)
T ss_dssp EEEESCGGGHH
T ss_pred EEEeCCHHHHH
Confidence 88 555544
No 134
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=58.18 E-value=20 Score=35.16 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=42.9
Q ss_pred eeeeecCCCCceEEecCCchhhHHh-----------hhcC-CCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 416 TLFVDKHPNLKVRVVHGNTCTAAVI-----------LNEL-PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 416 ~l~~~~~p~l~~rvv~g~~l~~a~v-----------~~~i-p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.=|+.-..+.=+|+=++-+...|+. ++.. .+.-+.|+.+|++|-+|++++..+.++|.+|..
T Consensus 126 aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~ 199 (347)
T 2hcy_A 126 QQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLG 199 (347)
T ss_dssp BSEEEEETTTSEEECTTCCHHHHGGGGTHHHHHHHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEE
T ss_pred eeEEEeccccEEECCCCCCHHHHHHHhhhHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEE
Confidence 3455444555677777766553321 2222 223467999999999999999999999999987
No 135
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=57.35 E-value=23 Score=34.96 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=44.5
Q ss_pred eeeecCCCCceEEecCCchhhHH-----------hhhcC--CCccceEEEeCCcchHHHHHHHHhhccCcEEEe---chh
Q 011375 417 LFVDKHPNLKVRVVHGNTCTAAV-----------ILNEL--PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSR 480 (487)
Q Consensus 417 l~~~~~p~l~~rvv~g~~l~~a~-----------v~~~i--p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~ 480 (487)
=|+.-..+.=+++=++-+...|+ -+.+. .+.-+.|+.+|++|-+|.+++..+..+|.+|.. +++
T Consensus 124 ey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~ 203 (353)
T 4dup_A 124 EYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTG 203 (353)
T ss_dssp SEEEEEGGGEEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHH
T ss_pred eEEEEcHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 34444444456666666554332 12222 234467999999999999999999999999988 555
Q ss_pred hhh
Q 011375 481 KFR 483 (487)
Q Consensus 481 ~~~ 483 (487)
+-+
T Consensus 204 ~~~ 206 (353)
T 4dup_A 204 KCE 206 (353)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 136
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=57.30 E-value=26 Score=34.32 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=53.7
Q ss_pred hcCCeEEEeccccccc-ccc-cCceeee-ecCCCCceEEecCCchhhH-------Hhhhc-CCCccceEEEeCCcchHHH
Q 011375 394 RLGVKVLSLAALNKNE-SLN-GGGTLFV-DKHPNLKVRVVHGNTCTAA-------VILNE-LPKDVKEVFLTGATSKLGR 462 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~-~ln-~~g~l~~-~~~p~l~~rvv~g~~l~~a-------~v~~~-ip~~~~~v~l~g~~~k~~~ 462 (487)
-.|+|+++.=-=|..+ .|= -.|.+.+ +..-..-.=++||+.||+. +-... -+++.+.|-+.|. |.+|+
T Consensus 70 ~~g~K~~~~~p~N~~~~glp~~~~~~~l~d~~tG~p~a~~d~~~lt~~rT~a~~~la~~~la~~~~~~igiIG~-G~~g~ 148 (312)
T 2i99_A 70 ALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGA-GVQAY 148 (312)
T ss_dssp EEEEEEEEEECCCSSSSCSSSEEEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-SHHHH
T ss_pred EEEEEEEEecCCCccccCCCceEEEEEEEECCCCCEEEEEcchhHHHHHHHHHHHHHHHHhCCCCCcEEEEECC-cHHHH
Confidence 4699998875555433 221 1233332 2233445668899988752 11122 2567788999996 89999
Q ss_pred HHHHHhhcc-Cc-EEEe
Q 011375 463 AIALYLCRK-RV-RVLK 477 (487)
Q Consensus 463 a~a~~lc~~-~~-~v~~ 477 (487)
++|.+|++. |+ +|.+
T Consensus 149 ~~a~~l~~~~g~~~V~v 165 (312)
T 2i99_A 149 SHYEIFTEQFSFKEVRI 165 (312)
T ss_dssp HHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHhCCCcEEEE
Confidence 999999976 87 7877
No 137
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=56.80 E-value=12 Score=36.77 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=30.4
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+|++|-+|.+.+..+...|.+|.. ++++-+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 183 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE 183 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3468999999999999999988889999988 444433
No 138
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=56.78 E-value=13 Score=36.70 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=28.0
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|+.+|++|-+|.+++..+..+|.+|..
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~ 192 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 192 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEE
Confidence 3467999999999999999999999999988
No 139
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=56.47 E-value=6.7 Score=43.94 Aligned_cols=30 Identities=33% Similarity=0.501 Sum_probs=26.4
Q ss_pred cceEEEeCCcchHHHHHHHHhh-ccCcE-EEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLC-RKRVR-VLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc-~~~~~-v~~ 477 (487)
-+.+++||++|-+|+++|..|+ ++|.+ |++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl 561 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVL 561 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEE
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEE
Confidence 4678999999999999999999 89997 555
No 140
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=56.16 E-value=23 Score=34.32 Aligned_cols=62 Identities=26% Similarity=0.308 Sum_probs=41.1
Q ss_pred eeeeecCCCCceEEecCCch-----------hhHHhhh-----cCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 416 TLFVDKHPNLKVRVVHGNTC-----------TAAVILN-----ELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 416 ~l~~~~~p~l~~rvv~g~~l-----------~~a~v~~-----~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.=|+.-..+.=+|+=++-+. ||+..++ .+.++-+.|+.+|++|=+|.+.+..+..+|.+|..
T Consensus 102 aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~ 179 (328)
T 1xa0_A 102 SEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA 179 (328)
T ss_dssp BSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEE
T ss_pred eeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEE
Confidence 33444444444666666554 3333333 24444335999999999999999988889999887
No 141
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=55.93 E-value=7.4 Score=37.13 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=26.9
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc-EEEe-chhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLK-DSRK 481 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~-~~~~ 481 (487)
+.|++.|+ |-+|.++|.+|++.|+ ++.+ +.+.
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 57999997 6899999999999999 6666 5555
No 142
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=55.80 E-value=9.2 Score=37.73 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=27.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
+.|+.+|++|-+|.+++..+.++|. +|..
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~ 191 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVG 191 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEE
Confidence 7899999999999999999999999 9987
No 143
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=55.40 E-value=8.5 Score=40.46 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=26.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhcc-CcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRK-RVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~-~~~v~~ 477 (487)
-+.|+++|+ |.+|+++|.+|+++ |.+|.+
T Consensus 23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v 52 (467)
T 2axq_A 23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTV 52 (467)
T ss_dssp CEEEEEECC-STTHHHHHHHHHTSTTEEEEE
T ss_pred CCEEEEECC-hHHHHHHHHHHHhCCCCeEEE
Confidence 367999998 99999999999998 888887
No 144
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=54.33 E-value=94 Score=28.00 Aligned_cols=36 Identities=11% Similarity=0.103 Sum_probs=29.8
Q ss_pred hhhcCCCccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 440 ILNELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 v~~~ip~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|++ .++++|+++|-. +=-=.+.|+.+.++|.+|.+
T Consensus 126 ~L~~--~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~v 162 (199)
T 1j2r_A 126 QLRR--RGIDTIVLCGISTNIGVESTARNAWELGFNLVI 162 (199)
T ss_dssp HHHH--TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHH--CCCCEEEEEeeeccHHHHHHHHHHHHCCCEEEE
Confidence 4554 489999999988 55558889999999999998
No 145
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=54.14 E-value=36 Score=33.60 Aligned_cols=83 Identities=13% Similarity=0.043 Sum_probs=53.9
Q ss_pred hcCCeEEEecccccccccccC-ceeee-ecCCCCceEEecCCchhhH-------H-hhhcCCCccceEEEeCCcchHHHH
Q 011375 394 RLGVKVLSLAALNKNESLNGG-GTLFV-DKHPNLKVRVVHGNTCTAA-------V-ILNELPKDVKEVFLTGATSKLGRA 463 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~~ln~~-g~l~~-~~~p~l~~rvv~g~~l~~a-------~-v~~~ip~~~~~v~l~g~~~k~~~a 463 (487)
-.|+|+++.=-=|..+.|-.- |.+.+ +..-..-.=++||+.||+. + ...--+++.+.|.+.|+ |..|++
T Consensus 61 ~~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lt~~RTaa~s~laa~~la~~~~~~v~iIGa-G~~a~~ 139 (322)
T 1omo_A 61 YAGLKWVNSHPGNPDKGLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGC-GTQAYF 139 (322)
T ss_dssp EEEEEEEEECTTTGGGTSCSCCEEEEEECTTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-SHHHHH
T ss_pred ceEEEEEecCCCccccCCCceeEEEEEEECCCCCEEEEEcCchHHHHHHHHHHHHHHHhccCCCCCEEEEEcC-cHHHHH
Confidence 479999997655655544332 33332 2223445668899988752 1 11122568889999996 799999
Q ss_pred HHHHhhc-cC-cEEEe
Q 011375 464 IALYLCR-KR-VRVLK 477 (487)
Q Consensus 464 ~a~~lc~-~~-~~v~~ 477 (487)
++.+|++ ++ -+|.+
T Consensus 140 ~~~al~~~~~~~~V~v 155 (322)
T 1omo_A 140 QLEALRRVFDIGEVKA 155 (322)
T ss_dssp HHHHHHHHSCCCEEEE
T ss_pred HHHHHHHhCCccEEEE
Confidence 9999997 44 45555
No 146
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=53.52 E-value=16 Score=38.03 Aligned_cols=48 Identities=19% Similarity=0.333 Sum_probs=37.3
Q ss_pred ceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 426 KVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 426 ~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.||.|+.=+++.+++ | +++.|.+||++ ++|+.|+....++..+|.+
T Consensus 188 vv~vv~g~~~~~~~L~~--~-~vd~V~fTGS~-~~G~~i~~~aa~~l~pv~l 235 (457)
T 3lns_A 188 YVAVIQGGRDENSHLLS--L-PFDFIFFTGSP-NVGKVVMQAAAKHLTPVVL 235 (457)
T ss_dssp TEEECCCCHHHHHHHTT--S-CCSEEEEESCH-HHHHHHHHHHHTTTCCEEE
T ss_pred hEEEecCCHHHHHHHhc--C-CCCEEEEECCH-HHHHHHHHHHhhccCceEE
Confidence 47788886544445554 5 79999999986 6899999988888888876
No 147
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=52.81 E-value=24 Score=34.24 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=28.2
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.++-+.|+.+|++|=+|.+.+..+..+|.+|..
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~ 180 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVA 180 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEE
Confidence 4444336999999999999999988889999877
No 148
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=52.72 E-value=11 Score=37.48 Aligned_cols=30 Identities=20% Similarity=0.233 Sum_probs=27.4
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|+.+|++|-+|.+++..+..+|.+|..
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~ 193 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIG 193 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEE
Confidence 367999999999999999999999999987
No 149
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=52.12 E-value=7 Score=47.19 Aligned_cols=54 Identities=15% Similarity=0.103 Sum_probs=40.1
Q ss_pred CCceEEecCCchhhHH--hhhcCCC-----ccceEEEeCCcch-HHHHHHHHhhccCcEEEe
Q 011375 424 NLKVRVVHGNTCTAAV--ILNELPK-----DVKEVFLTGATSK-LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 424 ~l~~rvv~g~~l~~a~--v~~~ip~-----~~~~v~l~g~~~k-~~~a~a~~lc~~~~~v~~ 477 (487)
....|--+++.+|..- .+.++.+ .-|-|++||++|- +|+|||..|.++|.+|++
T Consensus 445 ~~~~~~~~~~klT~~y~~~L~~~a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL 506 (1688)
T 2pff_A 445 XXXXXXXXXXXXXXXXXXXXXXXXXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVV 506 (1688)
T ss_dssp CSSSCCCCCHHHHHHHHHHHHTTSSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEE
T ss_pred ccccccccccccccccccccccccccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEE
Confidence 3455666777777653 2333322 2356999999987 999999999999999988
No 150
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=51.40 E-value=13 Score=37.34 Aligned_cols=28 Identities=18% Similarity=0.176 Sum_probs=26.6
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|.++|+ |.+|+++|..|.+.|.+|..
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~ 194 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMGAQVTI 194 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence 67999999 99999999999999999988
No 151
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=50.63 E-value=10 Score=46.60 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=28.1
Q ss_pred cceEEEeCCcch-HHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSK-LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k-~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|= +|++||..|.++|.+|++
T Consensus 652 gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl 682 (1878)
T 2uv9_A 652 GKHALMTGAGAGSIGAEVLQGLLSGGAKVIV 682 (1878)
T ss_dssp TCEEEEESCCTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999998 999999999999999988
No 152
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=50.41 E-value=10 Score=46.72 Aligned_cols=30 Identities=27% Similarity=0.318 Sum_probs=27.7
Q ss_pred cceEEEeCCcch-HHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSK-LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k-~~~a~a~~lc~~~~~v~~ 477 (487)
-|-|++||++|= +|++||..|.++|.+|++
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl 705 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVV 705 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEE
Confidence 367999999987 999999999999999988
No 153
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=50.29 E-value=10 Score=36.96 Aligned_cols=29 Identities=10% Similarity=0.217 Sum_probs=25.3
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
-+.|++.|+ |..|||+|.+|++.|+ +|.+
T Consensus 119 ~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v 148 (271)
T 1npy_A 119 NAKVIVHGS-GGMAKAVVAAFKNSGFEKLKI 148 (271)
T ss_dssp TSCEEEECS-STTHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEE
Confidence 378999996 6789999999999998 6877
No 154
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=49.43 E-value=11 Score=48.51 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=27.7
Q ss_pred cceEEEeCCcch-HHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSK-LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k-~~~a~a~~lc~~~~~v~~ 477 (487)
-|-++.||+++= +|+|||..|.++|.+|++
T Consensus 2136 gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi 2166 (3089)
T 3zen_D 2136 DEVAVVTGASKGSIAASVVGQLLDGGATVIA 2166 (3089)
T ss_dssp CCEEEEESCCTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCChhHHHHHHHHHHHHCCCEEEE
Confidence 367899999977 999999999999999998
No 155
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=48.42 E-value=14 Score=35.47 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=24.6
Q ss_pred eEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 450 EVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 450 ~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.|.+.|+ |..|||++.+|++.|+ +|.+
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v 137 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGVKDIWV 137 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCEEE
T ss_pred eEEEECc-HHHHHHHHHHHHHcCCCEEEE
Confidence 7889997 7899999999999999 7887
No 156
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=48.03 E-value=14 Score=36.98 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=26.7
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|++.|+ |-+|+++|..|.+.|.+|.+
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v 195 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLGAQVQI 195 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence 78999999 99999999999999999988
No 157
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=47.50 E-value=25 Score=34.43 Aligned_cols=87 Identities=13% Similarity=0.117 Sum_probs=50.4
Q ss_pred hhcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHH-----------hhhcC-CCccceEEEeCCcchH
Q 011375 393 DRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAV-----------ILNEL-PKDVKEVFLTGATSKL 460 (487)
Q Consensus 393 ~~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~-----------v~~~i-p~~~~~v~l~g~~~k~ 460 (487)
=+-|=+|+...-. ..+|+=.=|+.-..+.=+|+=++-+...|+ .++.. .++-+.|+++|++|=+
T Consensus 102 ~~vGdrV~~~~g~----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~g~~~vli~gg~g~v 177 (349)
T 3pi7_A 102 SLVGKRVAFATGL----SNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQEGEKAFVMTAGASQL 177 (349)
T ss_dssp HHTTCEEEEECTT----SSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHHHHHHHHCCSEEEESSTTSHH
T ss_pred CCCCCEEEEeccC----CCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHHHHHhhCCCCEEEEeCCCcHH
Confidence 3567788766321 122332334433333344454554433322 22222 2233678899999999
Q ss_pred HHHHHHHhhccCcEEEe---chhhhh
Q 011375 461 GRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 461 ~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
|.+.+..+...|.+|.. ++++-+
T Consensus 178 G~~a~qla~~~Ga~Vi~~~~~~~~~~ 203 (349)
T 3pi7_A 178 CKLIIGLAKEEGFRPIVTVRRDEQIA 203 (349)
T ss_dssp HHHHHHHHHHHTCEEEEEESCGGGHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 99999999999999988 455544
No 158
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=46.88 E-value=14 Score=32.07 Aligned_cols=34 Identities=29% Similarity=0.442 Sum_probs=28.3
Q ss_pred ccceEEEeCCc---chHHHHHHHHhhccCcEEEe-chh
Q 011375 447 DVKEVFLTGAT---SKLGRAIALYLCRKRVRVLK-DSR 480 (487)
Q Consensus 447 ~~~~v~l~g~~---~k~~~a~a~~lc~~~~~v~~-~~~ 480 (487)
..+.|-+.|++ +|+|++++.+|-+.|.+|.- +.+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~ 49 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCC
Confidence 35678999998 79999999999999999665 443
No 159
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=46.59 E-value=12 Score=35.85 Aligned_cols=33 Identities=33% Similarity=0.507 Sum_probs=26.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEE-e-chhhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVL-K-DSRKF 482 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~-~-~~~~~ 482 (487)
+.|++.|+.+ +|.++|.+|++-|+.-+ + +.+..
T Consensus 29 ~~VlvvG~Gg-lG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGG-LGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCST-THHHHHHHHHHTTCSEEEEECCCBC
T ss_pred CcEEEEccCH-HHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 5799999976 99999999999999543 3 54443
No 160
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=46.38 E-value=16 Score=38.90 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=26.8
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|.+||+. .+|+++|..|.+.|.+|.+
T Consensus 265 GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv 293 (488)
T 3ond_A 265 GKVAVVAGYG-DVGKGCAAALKQAGARVIV 293 (488)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC-HHHHHHHHHHHHCCCEEEE
Confidence 4679999987 9999999999999999998
No 161
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=46.34 E-value=36 Score=30.99 Aligned_cols=73 Identities=18% Similarity=0.194 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhhcCCeEEEecccccc----------cccccCceeeeecCCC---CceEEecCCchhhHHhhh---cCCC
Q 011375 383 KQIEDAILRADRLGVKVLSLAALNKN----------ESLNGGGTLFVDKHPN---LKVRVVHGNTCTAAVILN---ELPK 446 (487)
Q Consensus 383 ~~ie~ai~~a~~~g~kv~sl~~ln~~----------~~ln~~g~l~~~~~p~---l~~rvv~g~~l~~a~v~~---~ip~ 446 (487)
+.|-+|+.+|-++||+|==|- +.. +.++.++.......+. .|.-|+||..-....-.. .+.-
T Consensus 84 ~~I~~aL~~Aa~RGV~VRii~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v 161 (220)
T 4gel_A 84 LFLADSIKRALQRGVIIRIIS--DGEMVYSKGSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMR 161 (220)
T ss_dssp HHHHHHHHHHHHHTCEEEEEC--CTTTTTSTTCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCC
T ss_pred HHHHHHHHHHHHcCCeEEEEE--echhhhhhHHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccc
Confidence 457889999999999987652 211 1233444444443333 388899986543322211 1222
Q ss_pred ccceEEEeCCc
Q 011375 447 DVKEVFLTGAT 457 (487)
Q Consensus 447 ~~~~v~l~g~~ 457 (487)
.-.++.+||+.
T Consensus 162 ~D~~~v~~GS~ 172 (220)
T 4gel_A 162 PCYSIVISGSV 172 (220)
T ss_dssp CCCCEEEEESC
T ss_pred cccceEEecCc
Confidence 23467788876
No 162
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=45.21 E-value=18 Score=35.26 Aligned_cols=29 Identities=21% Similarity=0.289 Sum_probs=26.7
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|++.|+ |-.|||+|.+|.+.|.+|.+
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V 146 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSV 146 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEE
Confidence 678999997 88999999999999988888
No 163
>1vq2_A DCMP deaminase, deoxycytidylate deaminase; hydrolase; HET: DDN; 2.20A {Enterobacteria phage T4} SCOP: c.97.1.2
Probab=45.05 E-value=18 Score=33.28 Aligned_cols=70 Identities=21% Similarity=0.267 Sum_probs=48.1
Q ss_pred HHHHHHhhcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHH
Q 011375 387 DAILRADRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIAL 466 (487)
Q Consensus 387 ~ai~~a~~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~ 466 (487)
.||++|.+.|.. + .|++|||--.|= .+-|..|++. +.++|+.--...|.+-....
T Consensus 108 ~AI~~a~~~g~~------------~-~g~tLYvT~ePC---------~~Ca~aIi~a---GI~rVvy~~~~~~~~~~~~~ 162 (193)
T 1vq2_A 108 NAILFAAENGSS------------I-EGATMYVTLSPC---------PDCAKAIAQS---GIKKLVYCETYDKNKPGWDD 162 (193)
T ss_dssp HHHHHHHHHTCC------------C-TTCEEEEEECCC---------HHHHHHHHHH---TCCEEEEEECCTTCCTTTTH
T ss_pred HHHHHHHhcCCC------------c-CCeEEEEeCCCc---------HHHHHHHHHh---CCCEEEEecCCCCcchHHHH
Confidence 578888887742 2 579999998886 3556666665 88888886444555411135
Q ss_pred HhhccCcEEEe-chhh
Q 011375 467 YLCRKRVRVLK-DSRK 481 (487)
Q Consensus 467 ~lc~~~~~v~~-~~~~ 481 (487)
.|.+.||+|.. .+++
T Consensus 163 ~l~~aGI~v~~~~~~~ 178 (193)
T 1vq2_A 163 ILRNAGIEVFNVPKKN 178 (193)
T ss_dssp HHHHTTCEEEECCGGG
T ss_pred HHHHCCCEEEEeCHHH
Confidence 68899999987 4443
No 164
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=44.66 E-value=83 Score=31.11 Aligned_cols=72 Identities=13% Similarity=0.148 Sum_probs=48.0
Q ss_pred ccCceeeeecCCCCceEEecCCchhhHH-----------hh-hc-CC------------CccceEEEeCCcchHHHHHHH
Q 011375 412 NGGGTLFVDKHPNLKVRVVHGNTCTAAV-----------IL-NE-LP------------KDVKEVFLTGATSKLGRAIAL 466 (487)
Q Consensus 412 n~~g~l~~~~~p~l~~rvv~g~~l~~a~-----------v~-~~-ip------------~~~~~v~l~g~~~k~~~a~a~ 466 (487)
+|+=.=|+.-..+.=+++=++-+...|+ -+ +. +. +.-+.|+..|++|-+|.+.+.
T Consensus 104 ~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~q 183 (371)
T 3gqv_A 104 QGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQ 183 (371)
T ss_dssp CCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHH
T ss_pred CCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHH
Confidence 4444446655556666666776643332 12 32 21 444679999999999999998
Q ss_pred HhhccCcEEEe--chhhhh
Q 011375 467 YLCRKRVRVLK--DSRKFR 483 (487)
Q Consensus 467 ~lc~~~~~v~~--~~~~~~ 483 (487)
.+..+|.+|+. |+++-+
T Consensus 184 la~~~Ga~Vi~~~~~~~~~ 202 (371)
T 3gqv_A 184 MLRLSGYIPIATCSPHNFD 202 (371)
T ss_dssp HHHHTTCEEEEEECGGGHH
T ss_pred HHHHCCCEEEEEeCHHHHH
Confidence 88899999987 655544
No 165
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=43.89 E-value=31 Score=30.56 Aligned_cols=29 Identities=38% Similarity=0.443 Sum_probs=25.8
Q ss_pred ceEEEeCCc--ch--HHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k--~~~a~a~~lc~~~~~v~~ 477 (487)
+-|+++|.+ || ++++||..++++|.+|..
T Consensus 55 ~~~~l~G~~GtGKT~la~~i~~~~~~~~~~~~~ 87 (202)
T 2w58_A 55 KGLYLHGSFGVGKTYLLAAIANELAKRNVSSLI 87 (202)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 679999987 78 899999999999998875
No 166
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=42.31 E-value=1.3e+02 Score=28.16 Aligned_cols=32 Identities=13% Similarity=0.218 Sum_probs=27.6
Q ss_pred CccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.++++|+++|-. +=-=.+.|+-+.++|++|.+
T Consensus 137 ~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~v 169 (233)
T 3irv_A 137 RDVDTIIVCGTVTNVCCETTIRDGVHREYKVIA 169 (233)
T ss_dssp TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEeecccHHHHHHHHHHHHCCCEEEE
Confidence 389999999988 44458889999999999998
No 167
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=42.04 E-value=49 Score=32.39 Aligned_cols=36 Identities=11% Similarity=0.179 Sum_probs=29.9
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
-+.|+.+|++|-+|.+.+..+..+|.+|.. ++++-+
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~ 189 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIE 189 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 457999999999999999998899999998 354433
No 168
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=41.62 E-value=34 Score=33.55 Aligned_cols=71 Identities=17% Similarity=0.189 Sum_probs=45.1
Q ss_pred cCceeeeecCCCCceEEecCCchhhHH-----------hh-hcC-CCccceEEEeCCcchHHHHHHHHhhccCcEEEe--
Q 011375 413 GGGTLFVDKHPNLKVRVVHGNTCTAAV-----------IL-NEL-PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK-- 477 (487)
Q Consensus 413 ~~g~l~~~~~p~l~~rvv~g~~l~~a~-----------v~-~~i-p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-- 477 (487)
|+=.=|+.-..+.=+++-++-+...|+ -+ +.. .+.-+.|+.+|++|=+|.+.+..+..+|.+|..
T Consensus 103 G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~~ 182 (343)
T 3gaz_A 103 GTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA 182 (343)
T ss_dssp CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 333334444444455555665543332 12 222 233467999999999999999999999999988
Q ss_pred chhhhh
Q 011375 478 DSRKFR 483 (487)
Q Consensus 478 ~~~~~~ 483 (487)
++++-+
T Consensus 183 ~~~~~~ 188 (343)
T 3gaz_A 183 RGSDLE 188 (343)
T ss_dssp CHHHHH
T ss_pred CHHHHH
Confidence 555443
No 169
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=41.21 E-value=16 Score=31.95 Aligned_cols=33 Identities=18% Similarity=0.368 Sum_probs=27.5
Q ss_pred cceEEEeCCc---chHHHHHHHHhhccCcEEEe-chh
Q 011375 448 VKEVFLTGAT---SKLGRAIALYLCRKRVRVLK-DSR 480 (487)
Q Consensus 448 ~~~v~l~g~~---~k~~~a~a~~lc~~~~~v~~-~~~ 480 (487)
.+.|-+.|++ +|+|++++.+|.+.|.+|.- +.+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~ 49 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPK 49 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCc
Confidence 4567899998 79999999999999999776 443
No 170
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=41.05 E-value=30 Score=34.39 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=68.6
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++.+-..|-|||+ .+|-|++|-+- + ...|.
T Consensus 67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 146 (301)
T 2ef0_A 67 MVHLGGHAVYLDQKQVGIGEREPVRDVAKNLERFVEGIAARVFRHETVEALARHAKVPVVNALSDRAHPLQALADLLTLK 146 (301)
T ss_dssp HHHTTCEEEEEEGGGSCTTTCCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCcccccCCCCchHHHHHHHHHhCCEEEEecCChHHHHHHHHHCCCCEEeCCCCccCchHHHHHHHHHH
Confidence 5678999999974 5688774 6778889999984 47899998651 1 12444
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+..+ +-..|-+.|..|-+++..+..|++-|++|.+ +.+.|+
T Consensus 147 e~~g~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~ 190 (301)
T 2ef0_A 147 EVFGGLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGYE 190 (301)
T ss_dssp HHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCC
T ss_pred HHhCCcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchhc
Confidence 44432 2245888999999999999999999999999 666653
No 171
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=40.81 E-value=22 Score=30.91 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=26.4
Q ss_pred cceEEEeCCc---chHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGAT---SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~---~k~~~a~a~~lc~~~~~v~~ 477 (487)
.+.|-+.|++ +|+|++++.+|.+.|.+|.-
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~ 54 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYP 54 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEE
Confidence 4678999998 79999999999999999665
No 172
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=40.74 E-value=24 Score=30.57 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=26.4
Q ss_pred cceEEEeCCc---chHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGAT---SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~---~k~~~a~a~~lc~~~~~v~~ 477 (487)
.+.|-+.|++ +|+|++++.+|.+.|.+|.-
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~ 46 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLP 46 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEE
Confidence 4668899997 89999999999999999766
No 173
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=40.52 E-value=43 Score=35.32 Aligned_cols=53 Identities=19% Similarity=0.220 Sum_probs=39.2
Q ss_pred CCCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 422 HPNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 422 ~p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|.=-+.||.|+.- +.+.++ +- ++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 215 lP~gv~nvv~g~~~~~g~~L~-~~-p~v~~V~FTGS~-~~G~~i~~~aa~~~k~v~l 268 (498)
T 4f3x_A 215 LPEGVVNVITGRGETVGNALI-NH-PKVGMVSITGDI-ATGKKVLAAAAKTVKRTHL 268 (498)
T ss_dssp SCTTSEEECCCCTTTHHHHHH-TC-TTCCEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CCcCeEEEEeCCchHHHHHHH-hC-CCcCEEEEECCH-HHHHHHHHHHHhhCCceee
Confidence 46666888988654 223333 33 379999999987 7899999988888888877
No 174
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=40.34 E-value=19 Score=33.10 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=25.3
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
..|-+.| +|++|+++|..|.++|.+|..
T Consensus 24 mkI~IIG-~G~mG~~la~~l~~~g~~V~~ 51 (220)
T 4huj_A 24 TTYAIIG-AGAIGSALAERFTAAQIPAII 51 (220)
T ss_dssp CCEEEEE-CHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCEEEE
Confidence 5688899 799999999999999998887
No 175
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=40.12 E-value=19 Score=35.24 Aligned_cols=33 Identities=15% Similarity=0.075 Sum_probs=27.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKF 482 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~ 482 (487)
.+.|.++|. |++|+.+|..|.++|. |.+ ++|+.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~ 150 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK 150 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh
Confidence 357999996 8999999999999999 777 55544
No 176
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=40.10 E-value=71 Score=31.78 Aligned_cols=92 Identities=22% Similarity=0.378 Sum_probs=66.5
Q ss_pred HhhcCCeEEEecc-----ccccccc-------ccCceeeeecCCC----------CceEEecC-Cc--------hh-hHH
Q 011375 392 ADRLGVKVLSLAA-----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHG-NT--------CT-AAV 439 (487)
Q Consensus 392 a~~~g~kv~sl~~-----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g-~~--------l~-~a~ 439 (487)
+.+.|..|+.|+. ++|+|.+ .+.+-..|-|||. .+|=|++| ++ |+ .-.
T Consensus 62 ~~~LGg~~i~l~~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~g~~~HPtQ~LaDl~T 141 (306)
T 4ekn_B 62 MKRLGGEVITMTDLKSSSVAKGESLIDTIRVISGYADIIVLRHPSEGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYT 141 (306)
T ss_dssp HHHTTCEEEEECCCTTTTSSSSCCHHHHHHHHHHHCSEEEEECSSTTHHHHHHHHCSSCEEESCSSSSCCHHHHHHHHHH
T ss_pred HHHcCCEEEEcCCcccccCCCCCCHHHHHHHHHHhCcEEEEEcCChHHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHH
Confidence 4568999999975 7778764 5667788888885 36778887 42 11 223
Q ss_pred hhhcCCC-ccceEEEeCCc--chHHHHHHHHhhcc-CcEEEe-chhhhh
Q 011375 440 ILNELPK-DVKEVFLTGAT--SKLGRAIALYLCRK-RVRVLK-DSRKFR 483 (487)
Q Consensus 440 v~~~ip~-~~~~v~l~g~~--~k~~~a~a~~lc~~-~~~v~~-~~~~~~ 483 (487)
|..+... +=..|-+.|.. |-+++..+..+++- |++|.+ +.+.|+
T Consensus 142 i~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~~G~~v~~~~P~~~~ 190 (306)
T 4ekn_B 142 IMREIGRIDGIKIAFVGDLKYGRTVHSLVYALSLFENVEMYFVSPKELR 190 (306)
T ss_dssp HHHHHSCSTTCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGGC
T ss_pred HHHHhCCcCCCEEEEEcCCCCCcHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 4444332 33468889987 78999999999998 999998 776664
No 177
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=39.69 E-value=22 Score=33.71 Aligned_cols=27 Identities=30% Similarity=0.399 Sum_probs=24.7
Q ss_pred eEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 450 EVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 450 ~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|.+.|+ |.+|+++|..|.+.|.+|.+
T Consensus 118 ~v~iiG~-G~~g~~~a~~l~~~g~~v~v 144 (263)
T 2d5c_A 118 PALVLGA-GGAGRAVAFALREAGLEVWV 144 (263)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEECC-cHHHHHHHHHHHHCCCEEEE
Confidence 7999996 67999999999999998888
No 178
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=39.62 E-value=22 Score=36.23 Aligned_cols=30 Identities=33% Similarity=0.517 Sum_probs=26.9
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
.-+.|.+.|+ |.+|+++|.+|...|. +|.+
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v 196 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLV 196 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEE
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEE
Confidence 3467999998 9999999999999999 8888
No 179
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=39.56 E-value=17 Score=46.08 Aligned_cols=29 Identities=21% Similarity=0.359 Sum_probs=26.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcE-EEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVR-VLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~-v~~ 477 (487)
|-+++||++|=+|++||..|.++|.+ |++
T Consensus 1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl 1914 (2512)
T 2vz8_A 1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVL 1914 (2512)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEE
Confidence 56899999999999999999999998 544
No 180
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=39.49 E-value=26 Score=34.06 Aligned_cols=46 Identities=20% Similarity=0.249 Sum_probs=32.0
Q ss_pred cCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCc-EEEe
Q 011375 431 HGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRV-RVLK 477 (487)
Q Consensus 431 ~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~ 477 (487)
||..+..+.--+.+...-+.|++.|+.| -+|||+.+|.+.|+ +|.+
T Consensus 108 D~~Gf~~~L~~~g~~~~~~~~lilGaGG-aarai~~aL~~~g~~~i~i 154 (269)
T 3tum_A 108 DGAGFLGAAHKHGFEPAGKRALVIGCGG-VGSAIAYALAEAGIASITL 154 (269)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCSH-HHHHHHHHHHHTTCSEEEE
T ss_pred ChHHHHHHHHHhCCCcccCeEEEEecHH-HHHHHHHHHHHhCCCeEEE
Confidence 4444444443344555567899999976 58999999999998 4555
No 181
>2od4_A Hypothetical protein; metagenomics target, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Uncultured marine organism} SCOP: d.58.4.20
Probab=39.28 E-value=1.2 Score=35.99 Aligned_cols=48 Identities=25% Similarity=0.414 Sum_probs=35.7
Q ss_pred cCCeEEEecccccc-cccccCceeeeecCCCCceEEecCCchhhHHhhhcCCCccceE
Q 011375 395 LGVKVLSLAALNKN-ESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVKEV 451 (487)
Q Consensus 395 ~g~kv~sl~~ln~~-~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v~~~ip~~~~~v 451 (487)
...||+|||+.... -+-|.+..+|+..+|+ .-||-.|...|-++++||
T Consensus 35 wspkvislgaisaefvqsnensgmyiihypd---------kqtaisvfdkikpevdev 83 (101)
T 2od4_A 35 WSPKVISLGAISAEFVQSNENSGMYIIHYPD---------KQTAISVFDKIKPEVDEV 83 (101)
T ss_dssp HHHHHHHHTCSEEEEEEEETTEEEEEEEESS---------HHHHHHHHHHHHHHHHHH
T ss_pred CCccEEEecceeHhhhccCcCCceEEEECCC---------ccceeehhhccCcchhhh
Confidence 34689999998643 3557778889988886 457888988887666654
No 182
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=39.25 E-value=49 Score=33.29 Aligned_cols=90 Identities=12% Similarity=0.061 Sum_probs=68.2
Q ss_pred HhhcCCeEEEecc----cc------------ccccc-------ccCceeeeecCC--------------------CCceE
Q 011375 392 ADRLGVKVLSLAA----LN------------KNESL-------NGGGTLFVDKHP--------------------NLKVR 428 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln------------~~~~l-------n~~g~l~~~~~p--------------------~l~~r 428 (487)
+.+.|..|+.|+. ++ |+|.+ ++.+-..|-||| ..+|-
T Consensus 58 ~~~LGg~~i~l~~~~ss~~~e~~~g~~m~~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vP 137 (324)
T 1js1_X 58 ALNLGMNVIVLDINQGAWKLETERGVIMDGDKPEHLLEAIPVMGCYCDIIGVRSFARFENREYDYNEVIINQFIQHSGRP 137 (324)
T ss_dssp HHHTTCEEEEEECCGGGCCEECCSSCCCCSSCCEEHHHHHHHHHHTCSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSC
T ss_pred HHHcCCEEEEECCCCCceeeccccccccccCCCCCHHHHHHHHHHhCcEEEEecccccccccccccchHHHHHHhhCCCC
Confidence 5678999999974 34 55543 466778899998 56899
Q ss_pred EecCCch--------h-hHHhhhcCC--C-ccceEEE-----eCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 429 VVHGNTC--------T-AAVILNELP--K-DVKEVFL-----TGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 429 vv~g~~l--------~-~a~v~~~ip--~-~~~~v~l-----~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
|++|-+- + ...|..+.. + + ..|-. .|. |-+++..+..|++-|++|.+ +.+.|+
T Consensus 138 VINa~~~~~HPtQaLaDl~Ti~e~~g~~~l~-l~ia~a~~~~vGD-~rva~Sl~~~~~~~G~~v~~~~P~~~~ 208 (324)
T 1js1_X 138 VFSMEAATRHPLQSFADLITIEEYKKTARPK-VVMTWAPHPRPLP-QAVPNSFAEWMNATDYEFVITHPEGYE 208 (324)
T ss_dssp EEESSCSSCCHHHHHHHHHHHHHHCSSSSCE-EEEECCCCSSCCC-SHHHHHHHHHHHTSSSEEEEECCTTCC
T ss_pred EEECCCCCCCcHHHHHHHHHHHHHcCCCCee-EEEEEEcccccCC-cchHHHHHHHHHHCCCEEEEeCCcccC
Confidence 9999771 1 235556554 2 3 56888 899 89999999999999999999 777664
No 183
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=39.22 E-value=41 Score=33.37 Aligned_cols=37 Identities=16% Similarity=0.130 Sum_probs=30.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe--chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK--DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~--~~~~~~ 483 (487)
.-+.|+.+|++|=+|.+.+..+..+|.+|.. ++++.+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~~~~~~ 221 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDASE 221 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeChHHHH
Confidence 3468999999999999999888889999987 554433
No 184
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=39.20 E-value=42 Score=35.22 Aligned_cols=52 Identities=17% Similarity=0.070 Sum_probs=38.5
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.-.+.. |-+- ++++.|++||++ ++|++|+....++..+|.+
T Consensus 179 P~gvv~vv~g~~~~~~~-L~~~-p~vd~I~fTGS~-~~G~~i~~~aa~~lk~v~l 230 (484)
T 3ros_A 179 PEGSLINLYPSYDQLAD-IIAD-PRIQGVALTGSE-RGGSAVAEAAGKNLKKSTM 230 (484)
T ss_dssp CTTSEEEECCCHHHHHH-HHTS-TTEEEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred CcCeEEEEeCChHHHHH-HHhC-CCcCEEEEECCH-HHHHHHHHHHhccCCceEe
Confidence 44457889987654433 3332 458999999987 6899999888888888876
No 185
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=38.68 E-value=18 Score=34.08 Aligned_cols=83 Identities=18% Similarity=0.165 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhcCC--eEEEeccc--ccccccccC--ceeeeecCCCCceEEecCCchhhHHhhhcCCCcc-ceEEEeC
Q 011375 383 KQIEDAILRADRLGV--KVLSLAAL--NKNESLNGG--GTLFVDKHPNLKVRVVHGNTCTAAVILNELPKDV-KEVFLTG 455 (487)
Q Consensus 383 ~~ie~ai~~a~~~g~--kv~sl~~l--n~~~~ln~~--g~l~~~~~p~l~~rvv~g~~l~~a~v~~~ip~~~-~~v~l~g 455 (487)
.+|++|..-||+.|. -++++|-- +..+++-.. .+.|+-.+|.+. +.++...|-+|.++=++. -+++|+|
T Consensus 23 ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~~Gad~v~~v~~~~~~----~~~~~~~a~~l~~~i~~~~p~~Vl~g 98 (217)
T 3ih5_A 23 ELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILPYGVDKLHVFDAEGLY----PYTSLPHTSILVNLFKEEQPQICLMG 98 (217)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGGGTCSEEEEEECGGGS----SCCHHHHHHHHHHHHHHHCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHhcCCCEEEEecCcccc----cCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 467777777777785 45677752 112233333 356666666653 234444444444432222 2679999
Q ss_pred CcchHHHHHHHHhhc
Q 011375 456 ATSKLGRAIALYLCR 470 (487)
Q Consensus 456 ~~~k~~~a~a~~lc~ 470 (487)
+|+ .||.++-.|..
T Consensus 99 ~t~-~G~~laprlAa 112 (217)
T 3ih5_A 99 ATV-IGRDLGPRVSS 112 (217)
T ss_dssp CSH-HHHHHHHHHHH
T ss_pred CCc-chhhHHHHHHH
Confidence 974 67777777763
No 186
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=38.44 E-value=33 Score=29.74 Aligned_cols=44 Identities=11% Similarity=0.049 Sum_probs=32.4
Q ss_pred CCchhhHHhhhcCCCccceEEEeCCc--ch--HHHHHHHHhhccCcEEEe
Q 011375 432 GNTCTAAVILNELPKDVKEVFLTGAT--SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 432 g~~l~~a~v~~~ip~~~~~v~l~g~~--~k--~~~a~a~~lc~~~~~v~~ 477 (487)
|..-.+...++++ .-+-+++.|.+ || +.++++..++++|.++..
T Consensus 22 g~n~~~~~~l~~~--~g~~~~l~G~~G~GKTtL~~~i~~~~~~~g~~~~~ 69 (149)
T 2kjq_A 22 TENAELVYVLRHK--HGQFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAY 69 (149)
T ss_dssp CCTHHHHHHCCCC--CCSEEEEESSSTTTTCHHHHHHHHHHHTTTCCEEE
T ss_pred CccHHHHHHHHhc--CCCEEEEECCCCCCHHHHHHHHHHHHHhcCCcEEE
Confidence 3333445566777 33568999988 78 999999999988876655
No 187
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=38.30 E-value=27 Score=36.50 Aligned_cols=47 Identities=21% Similarity=0.335 Sum_probs=34.9
Q ss_pred eEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 427 VRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 427 ~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.||.|+.=.+...+.. +++.|++||++ ++||.|+....++..+|.+
T Consensus 179 v~vv~g~~~~~~~ll~~---~vd~I~FTGS~-~vG~~i~~~aa~~lkpv~l 225 (469)
T 3sza_A 179 YPVINGGVPETTELLKE---RFDHILYTGST-GVGKIIMTAAAKHLTPVTL 225 (469)
T ss_dssp SCBCCCSHHHHHHHTTS---CCSEEEEESCH-HHHHHHHHHHHTTTCCEEE
T ss_pred EEEEECCHHHHHHHHhc---CCCEEEEECCH-HHHHHHHHHHhhccCceEE
Confidence 55788864444445543 68999999976 6899999888887788876
No 188
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=37.87 E-value=1.1e+02 Score=31.26 Aligned_cols=92 Identities=15% Similarity=0.283 Sum_probs=68.3
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.| ++..-..|-|||. .+|=|++|-+ |+ .-.|.
T Consensus 63 ~~~LGg~vi~l~~~~ssl~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~ 142 (355)
T 4a8p_A 63 MEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV 142 (355)
T ss_dssp HHHTTCEEEEECBTTBCBTTTBCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence 4568999999974 6677764 5566778888886 3788999865 11 23566
Q ss_pred hcCCCc----cceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPKD----VKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~~----~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+.|+| -..|-+.|..|-+++..+..|++-|++|.+ +.+.|+
T Consensus 143 E~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 189 (355)
T 4a8p_A 143 EHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQ 189 (355)
T ss_dssp HTCCTTCCGGGCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTSS
T ss_pred HHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCCccC
Confidence 666422 347889999999999999999999999988 665553
No 189
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=37.86 E-value=44 Score=35.41 Aligned_cols=52 Identities=29% Similarity=0.375 Sum_probs=37.8
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|..-+...++. -++++.|++||++ ++|+.|+....++..+|.+
T Consensus 206 P~gvv~vv~g~~~~g~~L~~--~p~vd~I~FTGS~-~~G~~i~~~aa~~lk~v~l 257 (517)
T 3r31_A 206 PKGLFNVIQGDRDTGPLLVN--HPDVAKVSLTGSV-PTGRKVAAAAAGHLKHVTM 257 (517)
T ss_dssp CTTSEEECCCCTTHHHHHHT--CTTEEEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred CcccEEEEECCHHHHHHHHh--CCCcCEEeccCCH-HHHHHHHHHhhcCCCcEEE
Confidence 44447788884434444443 3568999999987 6899999988888888876
No 190
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=37.86 E-value=26 Score=33.93 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=26.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|-+.|.+|.+|.++|..|.+.|.+|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~ 50 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISI 50 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEE
Confidence 46889998999999999999999999988
No 191
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=37.60 E-value=97 Score=30.79 Aligned_cols=92 Identities=24% Similarity=0.283 Sum_probs=67.2
Q ss_pred HhhcCCeEEEecc-----cccccc-------cccCceeeeecCCC----------CceEEecCCc---------hh-hHH
Q 011375 392 ADRLGVKVLSLAA-----LNKNES-------LNGGGTLFVDKHPN----------LKVRVVHGNT---------CT-AAV 439 (487)
Q Consensus 392 a~~~g~kv~sl~~-----ln~~~~-------ln~~g~l~~~~~p~----------l~~rvv~g~~---------l~-~a~ 439 (487)
+.+.|..|+.|+. ++|+|. |++.+-..|-|||. .+|-|++|-+ |+ .-.
T Consensus 66 ~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~T 145 (308)
T 1ml4_A 66 MHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQYCDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYT 145 (308)
T ss_dssp HHHTTCEEEEESCGGGSGGGGTCCHHHHHHHHTTTCSEEEEEESSTTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHH
T ss_pred HHHhCCeEEEeCCCccccccCCCCHHHHHHHHHHhCcEEEEecCChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHH
Confidence 4568999999942 567776 57888889998885 3788998533 22 224
Q ss_pred hhhcCCC-ccceEEEeCCc--chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 440 ILNELPK-DVKEVFLTGAT--SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 440 v~~~ip~-~~~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
|..+..+ +=..|-+.|.. |-+++..+..|++-|++|.+ +.+.|+
T Consensus 146 i~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 193 (308)
T 1ml4_A 146 IKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLR 193 (308)
T ss_dssp HHHHSSCSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGC
T ss_pred HHHHhCCCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCcccc
Confidence 4444432 22368889997 78999999999999999999 777664
No 192
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=37.37 E-value=2.1e+02 Score=25.12 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=29.5
Q ss_pred hhhcCCCccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 440 ILNELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 v~~~ip~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|++ .+.++|+++|-. +=-=.+.|+-+.++|.+|.+
T Consensus 114 ~L~~--~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~v 150 (180)
T 1im5_A 114 ILRG--NGVKRVYICGVATEYCVRATALDALKHGFEVYL 150 (180)
T ss_dssp HHHH--TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHh--CCCCEEEEEEeecCHHHHHHHHHHHHCCCEEEE
Confidence 4554 389999999988 54558889999999999998
No 193
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=37.03 E-value=38 Score=34.42 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=30.3
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+|++|=+|.+.+..+..+|.+|+. ++++-+
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~ 259 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEA 259 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 3467999999999999999999899999887 554433
No 194
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=36.80 E-value=48 Score=32.00 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=46.6
Q ss_pred cCceeeeecCCCCceEEecCCchhhHHhh-----------hcC-CCccceEEEeCCcchHHHHHHHHhhccCcEEEe--c
Q 011375 413 GGGTLFVDKHPNLKVRVVHGNTCTAAVIL-----------NEL-PKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK--D 478 (487)
Q Consensus 413 ~~g~l~~~~~p~l~~rvv~g~~l~~a~v~-----------~~i-p~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~--~ 478 (487)
|+=.=|+.-.++.=+++-++-+...|+.+ +.. ++.-+.|+.+|++|-+|.+.+..+..+|.+|.. +
T Consensus 106 G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~ 185 (321)
T 3tqh_A 106 CCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTAS 185 (321)
T ss_dssp CCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CcceEEEEecHHHhccCCCCCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEec
Confidence 33344555556666777777765444321 211 233457999999999999999988899999987 5
Q ss_pred hhh
Q 011375 479 SRK 481 (487)
Q Consensus 479 ~~~ 481 (487)
+++
T Consensus 186 ~~~ 188 (321)
T 3tqh_A 186 KRN 188 (321)
T ss_dssp HHH
T ss_pred cch
Confidence 554
No 195
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=36.68 E-value=41 Score=33.52 Aligned_cols=92 Identities=14% Similarity=0.115 Sum_probs=67.6
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++.+-..|-|||+ .+|-|++|-+- + ...|.
T Consensus 61 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 140 (307)
T 2i6u_A 61 IAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIA 140 (307)
T ss_dssp HHHTTCEEEEEEGGGSGGGGTCCHHHHHHHHHHHEEEEEEECSSHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHH
Confidence 5678999999974 5677764 5667788899984 47899998751 1 12444
Q ss_pred hcCCC-ccceEEEeCCc-chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+..+ +-..|-+.|.. |-+++..+..|++-|++|.+ +.+.|+
T Consensus 141 e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~~ 185 (307)
T 2i6u_A 141 ERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFL 185 (307)
T ss_dssp HHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTSC
T ss_pred HHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCcccc
Confidence 44432 22368889998 89999999999999999999 666553
No 196
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=35.90 E-value=29 Score=35.07 Aligned_cols=28 Identities=21% Similarity=0.150 Sum_probs=26.2
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|.+.|+ |.+|+++|..+.+.|.+|..
T Consensus 169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~ 196 (377)
T 2vhw_A 169 ADVVVIGA-GTAGYNAARIANGMGATVTV 196 (377)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence 57999998 99999999999999999988
No 197
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=35.71 E-value=52 Score=34.87 Aligned_cols=52 Identities=23% Similarity=0.266 Sum_probs=38.1
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.==+.||.|+.=+++.++. -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 218 P~gvv~vv~g~~~~~~~L~~--~p~vd~I~FTGS~-~vG~~i~~~aa~~lkpv~l 269 (521)
T 4e4g_A 218 PAGILNVVNGDKGAVDAILT--HPDIAAVSFVGST-PIARYVYGTAAMNGKRAQC 269 (521)
T ss_dssp CTTSEEECCCCHHHHHHHHT--CTTCCEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred CcCeEEEEeCChHHHHHHHh--CCCcCEEEEECCH-HHHHHHHHHHhhcCCCeee
Confidence 44457889886433333333 2468999999987 6899999888888888887
No 198
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=35.55 E-value=1.8e+02 Score=27.02 Aligned_cols=31 Identities=13% Similarity=-0.001 Sum_probs=27.1
Q ss_pred ccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
++++|+++|-. +=-=.+.|+-+.++|++|.+
T Consensus 137 gi~~lii~G~~t~~CV~~Ta~da~~~Gy~v~v 168 (223)
T 3tg2_A 137 GRDQLIITGVYAHIGILSTALDAFMFDIQPFV 168 (223)
T ss_dssp TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred CcCceEEeecccChHHHHHHHHHHHCCCEEEE
Confidence 88999999988 44457888999999999998
No 199
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=35.47 E-value=54 Score=34.52 Aligned_cols=52 Identities=19% Similarity=0.319 Sum_probs=37.6
Q ss_pred CCCceEEecCCchh-hHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCT-AAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~-~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||+|+.-. .+.++. -++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 217 P~gvvnvv~g~~~~~g~~L~~--hp~v~~I~FTGS~-~~G~~i~~~aa~~~k~v~l 269 (497)
T 3i44_A 217 PSGVFNLINGDGANVGSYLSA--HPDLEMISFTGST-RAGKDISKNASNTLKRVCL 269 (497)
T ss_dssp CTTSEEECCCCTTTHHHHHHH--CTTCCEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CCCeEEEEeCCChHHHHHHHh--CCCcCEEEEeCcH-HHHHHHHHHHhhcCCceee
Confidence 55557788885432 222322 2479999999987 6899999888888888876
No 200
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=35.36 E-value=84 Score=31.48 Aligned_cols=83 Identities=14% Similarity=0.085 Sum_probs=52.5
Q ss_pred hcCCeEEEeccccccccccc-Cceeee-ecCCCCceEEecCCchhhH--------HhhhcCCCccceEEEeCCcchHHHH
Q 011375 394 RLGVKVLSLAALNKNESLNG-GGTLFV-DKHPNLKVRVVHGNTCTAA--------VILNELPKDVKEVFLTGATSKLGRA 463 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~~ln~-~g~l~~-~~~p~l~~rvv~g~~l~~a--------~v~~~ip~~~~~v~l~g~~~k~~~a 463 (487)
..|+|+++.=-=|..+.|-. .|.+.+ +..-..-.=++||+.||+. +...--+++.+.|.+.|+ |..|++
T Consensus 65 ~~g~K~v~~~p~N~~~glp~~~~~~~L~d~~tG~p~a~~d~~~lT~~RTaa~s~laa~~la~~~~~~v~iIGa-G~~a~~ 143 (350)
T 1x7d_A 65 RYAFKYVNGHPANTARNLHTVMAFGVLADVDSGYPVLLSELTIATALRTAATSLMAAQALARPNARKMALIGN-GAQSEF 143 (350)
T ss_dssp EEEEEEEEECGGGGGGTCCSEEEEEEEEETTTCCEEEEEECHHHHHHHHHHHHHHHHHHHSCTTCCEEEEECC-STTHHH
T ss_pred cEEEEEEEecCCcccCCCccEEEEEEEEECCCCCEEEEEcCCEEEeehhhHHHHHHHHHhccccCCeEEEECC-cHHHHH
Confidence 47999998765555443321 222222 2223445568899988642 112223678889999996 899999
Q ss_pred HHHHhhc-cC-cEEEe
Q 011375 464 IALYLCR-KR-VRVLK 477 (487)
Q Consensus 464 ~a~~lc~-~~-~~v~~ 477 (487)
++.+|++ ++ -+|.+
T Consensus 144 ~a~al~~~~~~~~V~V 159 (350)
T 1x7d_A 144 QALAFHKHLGIEEIVA 159 (350)
T ss_dssp HHHHHHHHSCCCEEEE
T ss_pred HHHHHHHhCCCcEEEE
Confidence 9999874 44 45666
No 201
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=35.31 E-value=34 Score=33.58 Aligned_cols=29 Identities=21% Similarity=0.406 Sum_probs=26.4
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCc--EEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRV--RVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~--~v~~ 477 (487)
.+.|-+.| +|.+|.++|..|.++|. +|..
T Consensus 33 ~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~ 63 (314)
T 3ggo_A 33 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYG 63 (314)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEE
Confidence 46789999 79999999999999999 8888
No 202
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=35.13 E-value=80 Score=31.71 Aligned_cols=92 Identities=15% Similarity=0.160 Sum_probs=67.6
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++.+-..|-|||+ .+|-|++|-+= + ...|.
T Consensus 80 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 159 (325)
T 1vlv_A 80 FAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIE 159 (325)
T ss_dssp HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCCEEEEECCChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence 5678999999974 5677764 6778888999985 37889998651 1 12344
Q ss_pred hcCCC-ccceEEEeCCc-chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+..+ +-..|-+.|.. |-+++..+..|++-|++|.+ +.+.|+
T Consensus 160 e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 204 (325)
T 1vlv_A 160 ENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELK 204 (325)
T ss_dssp HHHSCSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGC
T ss_pred HHhCCcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCcccc
Confidence 44332 22358889998 89999999999999999999 766663
No 203
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=34.74 E-value=55 Score=34.46 Aligned_cols=52 Identities=23% Similarity=0.289 Sum_probs=38.7
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||+|.. .+.--|-+- ++++.|.+||++ ++|++|+....++..+|.+
T Consensus 211 P~gvv~vv~g~~-~~g~~L~~~-p~v~~V~FTGS~-~~G~~i~~~aa~~~~~v~l 262 (503)
T 1a4s_A 211 PVGLVNVVQGGA-ETGSLLCHH-PNVAKVSFTGSV-PTGKKVMEMSAKTVKHVTL 262 (503)
T ss_dssp CTTSEEECCCSH-HHHHHHHHC-TTCCEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CcCeEEEEecCc-hHHHHHHhC-CCcCEEEEeCCH-HHHHHHHHHhhhcCCceEE
Confidence 444578999976 433333333 479999999985 7999999988888888887
No 204
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=34.59 E-value=98 Score=29.58 Aligned_cols=85 Identities=15% Similarity=0.128 Sum_probs=53.8
Q ss_pred hcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHHh-----------hhcC-CCccceEEEeCCcchHH
Q 011375 394 RLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVI-----------LNEL-PKDVKEVFLTGATSKLG 461 (487)
Q Consensus 394 ~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v-----------~~~i-p~~~~~v~l~g~~~k~~ 461 (487)
+-|=+|....-. ..+|+=.=|+.-..+.=+++=++-+...|+. ++.. .+.-+.|+..|+ |-+|
T Consensus 81 ~vGdrV~~~~~~----~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~Ga-G~vG 155 (315)
T 3goh_A 81 MLGRRVAYHTSL----KRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGF-GAVN 155 (315)
T ss_dssp GTTCEEEEECCT----TSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECC-SHHH
T ss_pred CCCCEEEEeCCC----CCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECC-CHHH
Confidence 446666655422 2234444466555566667777777665531 1222 233467999999 9999
Q ss_pred HHHHHHhhccCcEEEe--chhhhh
Q 011375 462 RAIALYLCRKRVRVLK--DSRKFR 483 (487)
Q Consensus 462 ~a~a~~lc~~~~~v~~--~~~~~~ 483 (487)
.+.+..+...|.+|.. |+++.+
T Consensus 156 ~~a~qlak~~Ga~Vi~~~~~~~~~ 179 (315)
T 3goh_A 156 NLLTQMLNNAGYVVDLVSASLSQA 179 (315)
T ss_dssp HHHHHHHHHHTCEEEEECSSCCHH
T ss_pred HHHHHHHHHcCCEEEEEEChhhHH
Confidence 9999888888999988 554443
No 205
>1pq3_A Arginase II, mitochondrial precursor; biosynthetic protein, hydrolase; HET: S2C; 2.70A {Homo sapiens} SCOP: c.42.1.1
Probab=34.08 E-value=84 Score=30.65 Aligned_cols=98 Identities=14% Similarity=0.227 Sum_probs=67.6
Q ss_pred hhhhhHHHHHHHHHHHhhcCCeEEEecc-----------cccccccccCceeeeecCCCCce------EEecCCchhhHH
Q 011375 377 AQTGINKQIEDAILRADRLGVKVLSLAA-----------LNKNESLNGGGTLFVDKHPNLKV------RVVHGNTCTAAV 439 (487)
Q Consensus 377 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~l~~~~~p~l~~------rvv~g~~l~~a~ 439 (487)
+-+..++.|++++.+.-+.|...+.||= +.+.. .+=|-+.++.|++++. .-.||+.+..|.
T Consensus 68 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~~~~~~~--~~~~vI~~DAH~Dl~~~~~~~sg~~hG~~~~~~~ 145 (306)
T 1pq3_A 68 SVGLANQELAEVVSRAVSDGYSCVTLGGDHSLAIGTISGHARHC--PDLCVVWVDAHADINTPLTTSSGNLHGQPVSFLL 145 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTTC--TTCEEEEECSSCCCCCTTTCSSCCGGGCHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEcCcccchHhHHHHHHhhC--CCeEEEEEecCcccCCCCCCCCCcccchHHHHHH
Confidence 4567789999999999999999998872 22211 1236788899999985 367888888887
Q ss_pred -hhhcC----CC--------ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 440 -ILNEL----PK--------DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 -v~~~i----p~--------~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
..+.. +. +.+.++..|--+- ...-..++.+.|+++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iGiR~~-~~~e~~~~~~~g~~~~~ 195 (306)
T 1pq3_A 146 RELQDKVPQLPGFSWIKPCISSASIVYIGLRDV-DPPEHFILKNYDIQYFS 195 (306)
T ss_dssp TTTGGGSCCCTTCTTCCCCSCGGGEEEESCCCC-CHHHHHHHHHTTCEEEC
T ss_pred hccCcccccccccccccCcCCcccEEEEEcCCC-CHHHHHHHHHcCCeEEE
Confidence 55431 11 4567888887642 23333455677888776
No 206
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=33.84 E-value=48 Score=35.10 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=35.4
Q ss_pred ceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccC--cEEEe
Q 011375 426 KVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKR--VRVLK 477 (487)
Q Consensus 426 ~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~--~~v~~ 477 (487)
=+.||.|..- +.+.++. -++++-|.+||++ .+|++|+....++. ++|.+
T Consensus 234 vv~vv~g~~~~~g~~L~~--~p~v~~V~fTGS~-~~G~~i~~~aa~~~~~~pv~l 285 (528)
T 3v4c_A 234 VFSLIQGGSRDVGHALVQ--HPHIKAVGFTGSL-AGGRALFDLCAARPEPIPFFG 285 (528)
T ss_dssp GEEEECCCCHHHHHHHHH--CTTCCEEEEESCH-HHHHHHHHHHHHSSSCCCEEE
T ss_pred eEEEEeCCCHHHHHHHHh--CCCCCEEEEECCh-HHHHHHHHHHhhccCCCceEE
Confidence 3678888642 3333333 3578999999986 68999998888777 77776
No 207
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=32.82 E-value=57 Score=34.12 Aligned_cols=52 Identities=21% Similarity=0.227 Sum_probs=37.0
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.=+.+.++. -++++-|.+||++ ++|++|+....++..+|.+
T Consensus 197 P~gvv~vv~g~~~~~~~L~~--~~~v~~I~fTGS~-~~g~~i~~~aa~~~~pv~l 248 (486)
T 1t90_A 197 PKGVFNVVYGAHDVVNGILE--HPEIKAISFVGSK-PVGEYVYKKGSENLKRVQS 248 (486)
T ss_dssp CTTSEEECCCSHHHHHHHHH--CTTEEEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEECCHHHHHHHHh--CCCCCEEEEeCCH-HHHHHHHHHHhccCCcEEe
Confidence 33347788886433333333 2478999999986 6899999888888888876
No 208
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=32.72 E-value=47 Score=34.61 Aligned_cols=47 Identities=28% Similarity=0.309 Sum_probs=36.3
Q ss_pred ceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 426 KVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 426 ~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+-+|+|..-+++..+.. ++-|.+||++ ++|++|+....++..+|.+
T Consensus 185 v~~~v~g~~~~~~~l~~~----v~~v~FTGS~-~~G~~i~~~aa~~~~~v~l 231 (474)
T 4h7n_A 185 VLIFVEGGGETGANLINY----VDFVCFTGSV-ATGREVAETAARRFIPAYL 231 (474)
T ss_dssp TEEECCCCHHHHHHHHTT----CSEEEEESCH-HHHHHHHHHHHHHTCCEEE
T ss_pred ceeeccccchhhhhhhhc----cceEEecccc-chhhhhhhhhhcccccccc
Confidence 356788877666665532 7789999976 6899999988888888876
No 209
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=32.58 E-value=41 Score=35.34 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=29.5
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|...+.|-+.|+ |-+|.+||..|++.|++|.+
T Consensus 50 ~~~~i~kVaVIGa-G~MG~~IA~~la~aG~~V~l 82 (460)
T 3k6j_A 50 EAYDVNSVAIIGG-GTMGKAMAICFGLAGIETFL 82 (460)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CcccCCEEEEECC-CHHHHHHHHHHHHCCCeEEE
Confidence 3556788999998 78999999999999999999
No 210
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=32.13 E-value=45 Score=31.97 Aligned_cols=29 Identities=14% Similarity=-0.032 Sum_probs=22.7
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
+=++|+|.. |==|.++|.+|+++|++|.+
T Consensus 60 ~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v 90 (246)
T 1jzt_A 60 HVFVIAGPGNNGGDGLVCARHLKLFGYNPVV 90 (246)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 446777766 66788899999999888876
No 211
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=32.13 E-value=29 Score=31.67 Aligned_cols=52 Identities=25% Similarity=0.254 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhcCCeEEEec-----cccc--ccccc-cCceeeeecCCC---CceEEecCCc
Q 011375 383 KQIEDAILRADRLGVKVLSLA-----ALNK--NESLN-GGGTLFVDKHPN---LKVRVVHGNT 434 (487)
Q Consensus 383 ~~ie~ai~~a~~~g~kv~sl~-----~ln~--~~~ln-~~g~l~~~~~p~---l~~rvv~g~~ 434 (487)
+.|.+|+.+|-++||+|==+- ..|. -+.|. .|-+++..+.+. -|+=||||.+
T Consensus 72 ~~i~~aL~~aa~rGV~Vrii~D~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~H~K~~viD~~~ 134 (196)
T 4ggj_A 72 PQLGRAVQLLHQRGVRVRVITDCDYMALNGSQIGLLRKAGIQVRHDQDLGYMHHKFAIVDKKV 134 (196)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCCC---CCHHHHHHHTTCEEEECCSSSCCCCEEEEETTTE
T ss_pred HHHHHHHHHHHHcCCcEEEEEecccccccHHHHHHHHhcCCCcccccccccccCcEEEEcceE
Confidence 457889999999999984431 1111 11232 334555544432 2777788763
No 212
>1win_A Flotillin 2; BAND 7 domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, cell adhesion; NMR {Mus musculus} SCOP: d.43.2.1
Probab=32.11 E-value=30 Score=30.11 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=26.1
Q ss_pred hhhhhHHHHHHHHH-HHhhcCCeEEEecccc
Q 011375 377 AQTGINKQIEDAIL-RADRLGVKVLSLAALN 406 (487)
Q Consensus 377 ~~~~in~~ie~ai~-~a~~~g~kv~sl~~ln 406 (487)
+++.||+.|.+.+. ++++.|++|.+...-+
T Consensus 91 ~R~~i~~~v~~~~~~~~~~~Gi~V~~v~Ikd 121 (143)
T 1win_A 91 DRDQFAKLVREVAAPDVGRMGIEILSFTIKD 121 (143)
T ss_dssp THHHHHHHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEEEEe
Confidence 68999999999998 6899999999987643
No 213
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=31.88 E-value=68 Score=33.84 Aligned_cols=53 Identities=21% Similarity=0.308 Sum_probs=37.4
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||+|+.-.+.--|-+ -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 224 P~gv~~vv~g~~~~~g~~L~~-~p~v~~V~FTGS~-~~G~~i~~~aa~~lk~v~l 276 (504)
T 3ek1_A 224 PAGVLQIVTGKAREIGAELTS-NDTVRKLSFTGST-EVGRLLMAQCAPTIKRISL 276 (504)
T ss_dssp CTTTEEECCSCHHHHHHHHHH-CTTCCEEEEESCH-HHHHHHHHHHGGGTCEEEE
T ss_pred CcccEEEEeCCCHHHHHHHHh-CCCcCEEEEECCH-HHHHHHHHhhhhhcCCeEe
Confidence 554578888865333222223 2458999999987 7899999888888788876
No 214
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.80 E-value=48 Score=32.29 Aligned_cols=29 Identities=14% Similarity=-0.057 Sum_probs=23.7
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
+=++|+|.. |==|.++|..|.++|++|.+
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V 111 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTI 111 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 456777766 66788999999999999877
No 215
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=31.75 E-value=64 Score=33.65 Aligned_cols=52 Identities=19% Similarity=0.211 Sum_probs=37.5
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.+++. ++++-|.+||++ ++|++|+....++..+|.+
T Consensus 198 P~gvv~vv~g~~~~~~~~L~~~--~~v~~V~fTGS~-~~g~~i~~~aa~~~~~v~l 250 (479)
T 2imp_A 198 PRGVFNLVLGRGETVGQELAGN--PKVAMVSMTGSV-SAGEKIMATAAKNITKVCL 250 (479)
T ss_dssp CTTSEEECCSCTTTHHHHHHHC--TTEEEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CcCeEEEEECCcHHHHHHHHhC--CCcCEEEEeCCH-HHHHHHHHHHhccCCcEEE
Confidence 3335788888642 23333332 578999999986 7899999988888888886
No 216
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=31.53 E-value=45 Score=32.03 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=25.7
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.+.|-+.| .|.+|+++|..|.+.|.+|..
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~ 58 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTV 58 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEE
Confidence 35688999 599999999999999999988
No 217
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=31.50 E-value=63 Score=33.96 Aligned_cols=52 Identities=19% Similarity=0.336 Sum_probs=35.9
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|..-+.+.+++. ++++-|++||++ ++|+.|+....++..+|.+
T Consensus 217 P~gvv~vv~g~~~~g~~L~~~--~~vd~I~FTGS~-~~g~~i~~~aa~~l~~v~l 268 (500)
T 2j6l_A 217 PGAICSLTCGGADIGTAMAKD--ERVNLLSFTGST-QVGKQVGLMVQERFGRSLL 268 (500)
T ss_dssp CGGGEEEECCSHHHHHHHHHC--TTCSEEEEESCH-HHHHHHHHHHHHTTCEEEE
T ss_pred CcCeEEEEeCCHHHHHHHhcC--CCcCEEEEECCH-HHHHHHHHHhccCCCceEE
Confidence 333478888843333333332 478899999985 7899998887777777766
No 218
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=31.48 E-value=59 Score=34.20 Aligned_cols=53 Identities=23% Similarity=0.191 Sum_probs=36.2
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.-.+.--|-+- ++++.|++||++ ++|+.|+....++..+|.+
T Consensus 207 P~gvv~vv~g~~~~~g~~L~~~-~~v~~I~FTGS~-~~G~~i~~~aa~~l~~v~l 259 (503)
T 3iwj_A 207 PPGVLNILTGLGPEAGAPLATH-PDVDKVAFTGSS-ATGSKIMTAAAQLVKPVSL 259 (503)
T ss_dssp CTTSEEECCSCHHHHTHHHHTC-TTCCEEEEESCH-HHHHHHHHHHGGGTCCEEE
T ss_pred CcCeEEEEeCCcHHHHHHHhhC-CCccEEEEECcH-HHHHHHHHHHhcCCCCEEE
Confidence 4444778888643222222232 368999999987 6899999888787778776
No 219
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=31.41 E-value=53 Score=33.59 Aligned_cols=37 Identities=16% Similarity=0.199 Sum_probs=30.1
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+|++|-+|.+.+..+...|.+|+. ++++-+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~ 267 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAE 267 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence 3467999999999999999988899999877 555443
No 220
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=31.28 E-value=48 Score=34.40 Aligned_cols=31 Identities=29% Similarity=0.465 Sum_probs=27.5
Q ss_pred CccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
...+.|-+.|+ |.+|.+||..|.++|++|.+
T Consensus 35 ~~~~kV~VIGa-G~MG~~iA~~la~~G~~V~l 65 (463)
T 1zcj_A 35 QPVSSVGVLGL-GTMGRGIAISFARVGISVVA 65 (463)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhCCCeEEE
Confidence 34677889996 89999999999999999998
No 221
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=31.21 E-value=33 Score=33.87 Aligned_cols=29 Identities=17% Similarity=0.345 Sum_probs=26.5
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|+.+|+ |-+|.+++..+..+|.+|..
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~ 209 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWM 209 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEE
Confidence 367999999 99999999999999999988
No 222
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=31.07 E-value=1.1e+02 Score=30.91 Aligned_cols=92 Identities=15% Similarity=0.283 Sum_probs=67.5
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ .+..-..|-|||. .+|-|++|-+ |+ .-.|.
T Consensus 85 ~~~LGg~~i~l~~~~ssl~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~ 164 (339)
T 4a8t_A 85 MEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMV 164 (339)
T ss_dssp HHHTTCEEEEECCC-CCSSSSSCHHHHHHHHHHHCSEEEEECSSHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCcccccCCCCcCHHHHHHHHHHhCCEEEEecCcHHHHHHHHHhCCCCEEECCCCCcCcHHHHHHHHHHH
Confidence 4678999999974 5666664 3445577888885 3788999865 11 23566
Q ss_pred hcCCCc----cceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPKD----VKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~~----~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+.|+| -..|-+.|..|-+++..+..|.+-|++|.+ +.+.|+
T Consensus 165 e~~~~G~~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 211 (339)
T 4a8t_A 165 EHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQ 211 (339)
T ss_dssp HTCCTTCCGGGCEEEEESSCCHHHHHHHHHHHHTTCEEEEECCTTSS
T ss_pred HHhhcCCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccC
Confidence 676422 347889999999999999999999999988 665553
No 223
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=30.40 E-value=70 Score=32.26 Aligned_cols=92 Identities=14% Similarity=0.097 Sum_probs=68.2
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|++ ++..-..|-|||+ .+|-|++|-|- + .-.|.
T Consensus 67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~s~vPVINa~~~~~HPtQ~LaDl~Ti~ 146 (335)
T 1dxh_A 67 AYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMR 146 (335)
T ss_dssp HHHTTCEEEEECTTTCCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCccccCcCCCcHHHHHHHHHhhCCEEEEecCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence 5578999999964 4577764 5567788889984 47899998651 1 12555
Q ss_pred hcCC-C-ccceEEEeCCc-chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELP-K-DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip-~-~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+.. + +-..|-+.|.. |-+++..+..|++-|++|.+ +++.|+
T Consensus 147 e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 192 (335)
T 1dxh_A 147 EHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALW 192 (335)
T ss_dssp HTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGGS
T ss_pred HHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCcccC
Confidence 6655 2 22468889998 89999999999999999999 766664
No 224
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=30.09 E-value=72 Score=33.84 Aligned_cols=52 Identities=25% Similarity=0.301 Sum_probs=36.4
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.++. -++++.|.+||++ .+|+.|+....++..+|.+
T Consensus 217 P~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~-~~G~~i~~~aa~~lk~v~l 269 (528)
T 3u4j_A 217 PDGVFNVVTGYGDPAGQVLAE--DPNVDMVAFTGSV-RVGTKLGEIAARTVKRVGL 269 (528)
T ss_dssp CTTSEEECCCSSTTHHHHHHH--CTTCCEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CCCeEEEEeCCcHHHHHHHHh--CCCcCEEEEeCCH-HHHHHHHHHHHhcCCceEE
Confidence 4444778888442 2233332 3568999999987 6899999888888888876
No 225
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=29.58 E-value=45 Score=32.09 Aligned_cols=29 Identities=17% Similarity=0.202 Sum_probs=26.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|.+.| .|.+|+++|..|...|.+|..
T Consensus 155 g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~ 183 (293)
T 3d4o_A 155 GANVAVLG-LGRVGMSVARKFAALGAKVKV 183 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEe-eCHHHHHHHHHHHhCCCEEEE
Confidence 35799999 589999999999999999988
No 226
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=29.54 E-value=1.3e+02 Score=29.78 Aligned_cols=92 Identities=25% Similarity=0.367 Sum_probs=65.5
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCc-eeeeecCCCC----------ceEEecCC-c--------hh-hHH
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGG-TLFVDKHPNL----------KVRVVHGN-T--------CT-AAV 439 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g-~l~~~~~p~l----------~~rvv~g~-~--------l~-~a~ 439 (487)
+.+.|..|+.|+. ++|+|.+ .+.| -..|-|||+- +|-|++|- + |+ .-.
T Consensus 58 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~~D~iviR~~~~~~~~~la~~~~vPVINagdg~~~HPtQaLaDl~T 137 (304)
T 3r7f_A 58 EKKLGMNVLNLDGTSTSVQKGETLYDTIRTLESIGVDVCVIRHSEDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMT 137 (304)
T ss_dssp HHHTTCEEEEEETTSTTSCSSSCHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHCSSCEEESCCTTSCCHHHHHHHHHH
T ss_pred HHHCCCeEEEECcccccCCCCCCHHHHHHHHHHhcCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHH
Confidence 4678999999975 6787765 5554 6778888753 67788873 2 11 223
Q ss_pred hhhcCCC-ccceEEEeCCc--chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 440 ILNELPK-DVKEVFLTGAT--SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 440 v~~~ip~-~~~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
|..+... +-..|-+.|.. |-+++..+..+++-|++|.+ +++.|+
T Consensus 138 i~e~~g~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 185 (304)
T 3r7f_A 138 IYEEFNTFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEWQ 185 (304)
T ss_dssp HHHHHSCCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGGS
T ss_pred HHHHhCCCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCccC
Confidence 4443332 33468889987 78999999999999999998 777664
No 227
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=29.48 E-value=92 Score=31.06 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=66.7
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++.+-..|-|||+ .+|-|++|-+= + ...|.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 147 (315)
T 1pvv_A 68 MAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIW 147 (315)
T ss_dssp HHHTTSEEEEEEGGGSTTTTTCCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCccccCCCCcCHHHHHHHHHHhCcEEEEecCchHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence 4568999999973 5677764 6778889999984 47889987551 1 11344
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+... +-..|-+.|..|-+++..+..|++-|++|.+ +.+.|+
T Consensus 148 e~~g~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~~ 191 (315)
T 1pvv_A 148 EKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGYE 191 (315)
T ss_dssp HHHSCCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred HHhCCcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCcccc
Confidence 44332 2235888999999999999999999999999 666553
No 228
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=29.45 E-value=65 Score=31.92 Aligned_cols=92 Identities=20% Similarity=0.194 Sum_probs=65.0
Q ss_pred HhhcCCeEEEec-----cccccccc-------ccCceeeeecCCC----------CceEEecC-Cc--------hhh-HH
Q 011375 392 ADRLGVKVLSLA-----ALNKNESL-------NGGGTLFVDKHPN----------LKVRVVHG-NT--------CTA-AV 439 (487)
Q Consensus 392 a~~~g~kv~sl~-----~ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g-~~--------l~~-a~ 439 (487)
+.+.|..|+.|+ .++|+|.+ ++..-..|-|||. .+|-|++| +| |+= ..
T Consensus 60 ~~~LGg~~i~l~~~~~s~~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~la~~~~vPVINaG~g~~~HPtQ~LaDl~T 139 (299)
T 1pg5_A 60 IINLGGDVIGFSGEESTSVAKGENLADTIRMLNNYSDGIVMRHKYDGASRFASEISDIPVINAGDGKHEHPTQAVIDIYT 139 (299)
T ss_dssp HHHTTCEEEEEECC-------CCCHHHHHHHHHHHCSEEEEEESSBTHHHHHHHHCSSCEEEEEETTTBCHHHHHHHHHH
T ss_pred HHHhCCEEEEeCCCCcccccCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHH
Confidence 567899999995 35788875 5667888889884 47889997 53 221 23
Q ss_pred hhhcCCC-ccceEEEeCCc--chHHHHHHHHhhcc-CcEEEe-chhhhh
Q 011375 440 ILNELPK-DVKEVFLTGAT--SKLGRAIALYLCRK-RVRVLK-DSRKFR 483 (487)
Q Consensus 440 v~~~ip~-~~~~v~l~g~~--~k~~~a~a~~lc~~-~~~v~~-~~~~~~ 483 (487)
|..+..+ +=..|-+.|.. |-+++..+..|++- |++|.+ +.+.|+
T Consensus 140 i~e~~g~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~ 188 (299)
T 1pg5_A 140 INKHFNTIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLR 188 (299)
T ss_dssp HHHHHSCSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGC
T ss_pred HHHHhCCcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhc
Confidence 3333332 22458889997 89999999999999 999999 777764
No 229
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=29.34 E-value=44 Score=33.92 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=26.4
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-|.|.+.|. |++|+.+|..|.+.|.+|++
T Consensus 173 GktV~V~G~-G~VG~~~A~~L~~~GakVvv 201 (364)
T 1leh_A 173 GLAVSVQGL-GNVAKALCKKLNTEGAKLVV 201 (364)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred cCEEEEECc-hHHHHHHHHHHHHCCCEEEE
Confidence 367899997 88999999999999999998
No 230
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=29.22 E-value=47 Score=32.08 Aligned_cols=29 Identities=21% Similarity=0.162 Sum_probs=26.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+.|.+.|. |.+|+++|..|.+.|.+|..
T Consensus 157 g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~ 185 (300)
T 2rir_A 157 GSQVAVLGL-GRTGMTIARTFAALGANVKV 185 (300)
T ss_dssp TSEEEEECC-SHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCEEEE
Confidence 357899995 89999999999999999998
No 231
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=29.18 E-value=72 Score=33.67 Aligned_cols=52 Identities=25% Similarity=0.387 Sum_probs=37.6
Q ss_pred CCCceEEecCCchh-hHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCT-AAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~-~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.==+.||.|+.-. .+.++. -++++.|.+||++ ++||.|+....++..+|.+
T Consensus 203 P~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~-~vG~~i~~~aa~~l~~v~l 255 (506)
T 3rh9_A 203 PDGMVNLVMGKASVIGKVLCE--HKDVPMLSFTGST-EVGRKLIVDTAEQVKKLAL 255 (506)
T ss_dssp CTTSEEECCSCHHHHHHHHHH--CTTCCEEEEESCH-HHHHHHHHHTTTTTCEEEE
T ss_pred ChhhEEEEeCCChHHHHHHHh--CCCCCEEEEECCH-HHHHHHHHHhhhcCCceEE
Confidence 44457888886432 233333 3568999999987 6899999888888888876
No 232
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=29.04 E-value=61 Score=34.06 Aligned_cols=52 Identities=19% Similarity=0.240 Sum_probs=37.0
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|..-+.+.++. -++++-|.+||++ ++|++|+....++..+|.+
T Consensus 202 P~gvv~vv~g~~~~g~~L~~--~~~v~~I~FTGS~-~~G~~i~~~aa~~l~pv~l 253 (495)
T 3b4w_A 202 PEGVLSVVPGGIETGQALTS--NPDIDMFTFTGSS-AVGREVGRRAAEMLKPCTL 253 (495)
T ss_dssp CTTSEEECCBSHHHHHHHTT--CTTCCEEEEESCH-HHHHHHHHHHHHTTCCEEE
T ss_pred CcCeEEEEeCCHHHHHHHHh--CCCcCEEEEeCCH-HHHHHHHHHhhhcCCceee
Confidence 44457888883323333333 3578999999986 7899999888888888876
No 233
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=28.98 E-value=71 Score=33.32 Aligned_cols=53 Identities=23% Similarity=0.275 Sum_probs=36.9
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|+=-+.+|+|+.-.+.--|-+ -++++.|++||++ ++|++|+....++..+|.+
T Consensus 201 P~gvv~vv~g~~~~~g~~L~~-~p~v~~I~fTGS~-~~g~~i~~~aa~~~~~v~l 253 (481)
T 3jz4_A 201 PAGVFNVVTGSAGAVGNELTS-NPLVRKLSFTGST-EIGRQLMEQCAKDIKKVSL 253 (481)
T ss_dssp CTTTEEECCBCTHHHHHHHHH-CTTEEEEEEESCH-HHHHHHHHHHTTTTCEEEE
T ss_pred CCCeEEEEeCCChHHHHHHHh-CCCcCEEEEECCH-HHHHHHHHHHhhcCCceEE
Confidence 555578888864322222222 2458899999986 6899999888888888876
No 234
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=28.91 E-value=74 Score=33.29 Aligned_cols=53 Identities=19% Similarity=0.235 Sum_probs=35.0
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.==+.||+|+.-.+.--|-+ -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 204 P~gv~~vv~g~~~~~g~~L~~-~p~v~~v~FTGS~-~~G~~i~~~aa~~~k~v~l 256 (484)
T 3ifg_A 204 PKGVLSVVIGDPKAIGTEITS-NPIVRKLSFTGST-AVGRLLMAQSAPTVKKLTL 256 (484)
T ss_dssp CTTSEEECCBCHHHHHHHHHH-CTTCCEEEEESCH-HHHHHHHHHTGGGTCEEEE
T ss_pred CcccEEEEeCCCHHHHHHHHh-CCCcCEEEEECCH-HHHHHHHHHhhccCCceEE
Confidence 333467787764322222222 2468899999986 6899998888887788876
No 235
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=28.86 E-value=84 Score=33.01 Aligned_cols=52 Identities=21% Similarity=0.194 Sum_probs=38.8
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.+++ -++++-|.+||++ ++|++|+....++..+|.+
T Consensus 214 P~gvv~vv~g~~~~~g~~L~~--~p~vd~I~FTGS~-~~G~~i~~~aa~~l~~v~l 266 (495)
T 1wnd_A 214 PAGVVNILFGRGKTVGDPLTG--HPKVRMVSLTGSI-ATGEHIISHTASSIKRTHM 266 (495)
T ss_dssp CTTSEEECCCCTTTTHHHHHT--CTTEEEEEEESCH-HHHHHHHHHHGGGTCEEEE
T ss_pred CcCeEEEEeCCCHHHHHHHHh--CCCcCEEEEECcH-HHHHHHHHHHHhcCCcccc
Confidence 5556888988532 3333444 3579999999985 6999999988888899887
No 236
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=28.85 E-value=1.3e+02 Score=30.19 Aligned_cols=92 Identities=13% Similarity=0.084 Sum_probs=69.1
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCCC----------ceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPNL----------KVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~l----------~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++..-..|-|||.- +|-|++|-|- + .-.|.
T Consensus 66 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~IviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQ~LaDl~Ti~ 145 (333)
T 1duv_G 66 AYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQ 145 (333)
T ss_dssp HHHTTCEEEEECSSSSCBTTTBCHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCccccCcCCCcHHHHHHHHHHhCCEEEEEcCCchHHHHHHHhCCCCeEcCCCCCCCchHHHHHHHHHH
Confidence 5568999999964 5677764 67788899999864 7999999761 1 12555
Q ss_pred hc-CC-C-ccceEEEeCCc-chHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NE-LP-K-DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~-ip-~-~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+ .. + +-..|-+.|.. +-+++..+..|++-|++|.+ +.+.|+
T Consensus 146 e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 192 (333)
T 1duv_G 146 EHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACW 192 (333)
T ss_dssp HHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGGC
T ss_pred HHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCcccC
Confidence 55 44 2 22368889998 89999999999999999999 766664
No 237
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=28.64 E-value=65 Score=33.83 Aligned_cols=52 Identities=21% Similarity=0.246 Sum_probs=35.8
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||+|+.- +.+.++ +- ++++-|.+||++ ++|++|+....++..+|.+
T Consensus 204 P~gvv~vv~g~~~~~g~~L~-~~-p~vd~I~fTGS~-~~G~~i~~~aa~~l~pv~l 256 (497)
T 3k2w_A 204 PDGVLNVINGTGSVVGQTLC-ES-PITKMITMTGST-VAGKQIYKTSAEYMTPVML 256 (497)
T ss_dssp CTTSEEECCSCTTTHHHHHH-HC-SSEEEEEEESCH-HHHHHHHHHHTTTTCCEEE
T ss_pred CcCeEEEEeCCchHHHHHHH-hC-CCcCEEEEECcH-HHHHHHHHHhhhcCCCeEE
Confidence 4445778887542 222333 32 478999999986 6889999887777777776
No 238
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=28.58 E-value=89 Score=32.97 Aligned_cols=51 Identities=24% Similarity=0.238 Sum_probs=37.4
Q ss_pred CCCceEEecCCc--hhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNT--CTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~--l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+. ...+.+-+ ++++-|.+||++ ++|++|+....++..+|.+
T Consensus 218 P~gvv~vv~g~~~~~g~~L~~~---p~vd~I~FTGS~-~~G~~I~~~aa~~l~~v~l 270 (515)
T 2d4e_A 218 PPGVFNLVQGFGEEAGAALVAH---PLVPLLTLTGET-ETGKIVMRNAADHLKRLSP 270 (515)
T ss_dssp CTTSEEECCCCTTTHHHHHHHC---TTCCEEEEESCH-HHHHHHHHHHGGGTCEEEE
T ss_pred CcCeEEEEeCCchHHHHHHHhC---CCcCEEEEeCcH-HHHHHHHHHHhhcCCceEe
Confidence 444578888864 33333322 478999999985 7999999998888889876
No 239
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=28.54 E-value=64 Score=31.10 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=22.9
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
+=++|+|.. |==|.++|..|+++|++|.+
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v 117 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVIL 117 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 345777766 66788999999999999877
No 240
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=28.36 E-value=39 Score=32.40 Aligned_cols=37 Identities=19% Similarity=0.126 Sum_probs=26.0
Q ss_pred hhcCCC-ccceEEEeCCc---ch--HHHHHHHHhhccCcEEEe
Q 011375 441 LNELPK-DVKEVFLTGAT---SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 441 ~~~ip~-~~~~v~l~g~~---~k--~~~a~a~~lc~~~~~v~~ 477 (487)
+|.... +.+.+|+||.. || +..+++.+|.|+|.||..
T Consensus 18 ~~~~~~~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~ 60 (251)
T 3fgn_A 18 ENLYFQSHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAV 60 (251)
T ss_dssp ----CCSSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHhcccCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEE
Confidence 344433 45778999877 66 667888888899999987
No 241
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=28.34 E-value=59 Score=33.67 Aligned_cols=52 Identities=19% Similarity=0.199 Sum_probs=34.0
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.+|.|+.=+...++. -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 182 P~gv~~vv~g~~~~~~~l~~--~~~v~~v~fTGS~-~~g~~i~~~aa~~~~~v~l 233 (462)
T 3etf_A 182 PAGVYGWVNANNEGVSQMIN--DPRIAAVTVTGSV-RAGAAIGAQAGAALKKCVL 233 (462)
T ss_dssp CBTTEEECCCCHHHHHHHHT--STTEEEEEEESCH-HHHHHHHHHHHHTTCCEEE
T ss_pred CcCeEEEEECCHHHHHHHhc--CCCCCEEEEeCCc-hHHHHHHHHHhccCCceEE
Confidence 44446777775433333332 2478889999986 6788888887777666665
No 242
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=27.90 E-value=71 Score=33.60 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=33.9
Q ss_pred ceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccC--cEEEe
Q 011375 426 KVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKR--VRVLK 477 (487)
Q Consensus 426 ~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~--~~v~~ 477 (487)
-+.||.|..- +...++. -++++-|.+||++ ++|+.|+....++. .+|.+
T Consensus 201 vv~vv~g~~~~~g~~L~~--~p~v~~I~FTGS~-~~G~~i~~~aa~~l~~~pv~l 252 (510)
T 1ez0_A 201 IFTLLQGNQRALGQALVS--HPEIKAVGFTGSV-GGGRALFNLAHERPEPIPFYG 252 (510)
T ss_dssp GEEEECCSCTHHHHHHHH--CTTCCEEEEESCH-HHHHHHHHHHHHSSSCCCEEE
T ss_pred eEEEEeCCcHHHHHHHHc--CCCCCEEEEeCcH-HHHHHHHHHhhccCCCccEEE
Confidence 3678888533 2333333 2478999999985 78999998777663 77766
No 243
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=27.85 E-value=77 Score=31.19 Aligned_cols=36 Identities=14% Similarity=0.057 Sum_probs=28.9
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.-+.|+.+| +|-+|.+.+..+...|.+|.. ++++.+
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~ 227 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLD 227 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHH
Confidence 345799999 889999999888889999988 445443
No 244
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=27.57 E-value=4e+02 Score=25.28 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=28.6
Q ss_pred hhhcCCCccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 440 ILNELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 v~~~ip~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|++ .|.++|+++|-. +=-=.+.|.-+.++|++|.+
T Consensus 139 ~L~~--~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~v 175 (287)
T 2fq1_A 139 MLKE--SGRNQLIITGVYAHIGCMTTATDAFMRDIKPFM 175 (287)
T ss_dssp HHHH--TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHH--CCCCEEEEEEeCcchHHHHHHHHHHHCCCEEEE
Confidence 3444 389999999988 43346888889999999998
No 245
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=27.53 E-value=65 Score=31.94 Aligned_cols=95 Identities=21% Similarity=0.216 Sum_probs=61.8
Q ss_pred hhhhhH-HHHHHHHHHHhhcC-CeEEEeccccc---ccccccCc--eeeeecCCCCceEEecCCchhhHHhhhcCCCccc
Q 011375 377 AQTGIN-KQIEDAILRADRLG-VKVLSLAALNK---NESLNGGG--TLFVDKHPNLKVRVVHGNTCTAAVILNELPKDVK 449 (487)
Q Consensus 377 ~~~~in-~~ie~ai~~a~~~g-~kv~sl~~ln~---~~~ln~~g--~l~~~~~p~l~~rvv~g~~l~~a~v~~~ip~~~~ 449 (487)
....|| +.=.+|+-.|.+.| |-++++|---+ .+++-..| +.|+-.+|.+. +.++...|-+|.++ +.--
T Consensus 9 ~~g~l~~~~~~eal~aA~~Lg~V~av~~G~~~~~~~~~~a~a~GaDkv~~v~d~~l~----~~~~~~~a~~La~~-~~~p 83 (307)
T 1efp_A 9 TNGALNRDATAKAVAAVKALGDVTVLCAGASAKAAAEEAAKIAGVAKVLVAEDALYG----HRLAEPTAALIVGL-AGDY 83 (307)
T ss_dssp SSSCBCHHHHHHHHHHHGGGSCEEEEEEETTCHHHHHHHHTSTTEEEEEEEECGGGT----TCCHHHHHHHHHHH-HTTC
T ss_pred cCCEeCchhhHHHHHHHHHhCCEEEEEECCchHHHHHHHHHhcCCCEEEEecCchhc----cCCHHHHHHHHHHH-ccCC
Confidence 455678 77778888887766 45567773211 12333445 67777777654 35677777777777 5444
Q ss_pred eEEEeCCcchHHHHHHHHhhcc-CcEEEe
Q 011375 450 EVFLTGATSKLGRAIALYLCRK-RVRVLK 477 (487)
Q Consensus 450 ~v~l~g~~~k~~~a~a~~lc~~-~~~v~~ 477 (487)
+++|+|+|+ .|+.++-.|..| |...+.
T Consensus 84 d~VL~g~ts-~G~~laprlAa~L~~~~vt 111 (307)
T 1efp_A 84 SHIAAPATT-DAKNVMPRVAALLDVMVLS 111 (307)
T ss_dssp SEEEEESSH-HHHHHHHHHHHHTTCCEEE
T ss_pred CEEEEeCCc-chhhHHHHHHHHhCCCccc
Confidence 889999986 688888887743 554443
No 246
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=27.41 E-value=2.1e+02 Score=25.88 Aligned_cols=96 Identities=11% Similarity=0.044 Sum_probs=53.7
Q ss_pred hhhhHHHHHHHHHHHhhcCCeEEEecccccc-cc---cccCceeeeecCCCCceEEec--------CCchhhHHhhhcCC
Q 011375 378 QTGINKQIEDAILRADRLGVKVLSLAALNKN-ES---LNGGGTLFVDKHPNLKVRVVH--------GNTCTAAVILNELP 445 (487)
Q Consensus 378 ~~~in~~ie~ai~~a~~~g~kv~sl~~ln~~-~~---ln~~g~l~~~~~p~l~~rvv~--------g~~l~~a~v~~~ip 445 (487)
.+.+=+-|.+.|..|.+.|+.|+-----.+. .. -+..|++.=.-.|.-.-.|++ |+.|.. .|++
T Consensus 45 ~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~g~~g~~~~~l~~~~~~~vi~K~~~saF~~t~L~~--~L~~-- 120 (197)
T 4h17_A 45 MDEAVANIARLLDAARKSGRPIIHVRHLGTVGGRFDPQGPAGQFIPGLEPLEGEIVIEKRMPNAFKNTKLHE--TLQE-- 120 (197)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTSTTCTTSGGGSBCTTCCCCTTCEEEEESSSSTTTTTCHHH--HHHH--
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCCccccCCCCccCCHhhCCCCCCEEEeCCcCCCcccchHHH--HHHh--
Confidence 3444445556666788999998865332221 00 112232221111111123333 222222 2333
Q ss_pred CccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.+.++|+++|-. +=-=.+.|+.+.++|.+|.+
T Consensus 121 ~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~v 153 (197)
T 4h17_A 121 LGHLDLIVCGFMSHSSVSTTVRRAKDYGYRCTL 153 (197)
T ss_dssp HTCSEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEEeeCcCHHHHHHHHHHHHCCCEEEE
Confidence 378999999988 44457888999999999998
No 247
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=26.99 E-value=95 Score=32.64 Aligned_cols=52 Identities=31% Similarity=0.305 Sum_probs=36.6
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhh-ccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLC-RKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc-~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.++. -++++-|.+||++ ++|+.|+.... ++..+|.+
T Consensus 215 P~gv~~vv~g~~~~~g~~L~~--~~~v~~I~FTGS~-~~G~~i~~~aa~~~l~~v~l 268 (501)
T 1bxs_A 215 PPGVVNIVPGYGPTAGAAISS--HMDVDKVAFTGST-EVGKLIKEAAGKSNLKRVSL 268 (501)
T ss_dssp CTTSEEECCSCTTTHHHHHHT--CTTCSEEEEESCH-HHHHHHHHHHHHTTCCEEEE
T ss_pred CcceEEEEecCchHHHHHHHh--CCCcCEEEEECCH-HHHHHHHHHhhhccCCcEEE
Confidence 4445788888532 2223332 2479999999986 78999998888 77888876
No 248
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=26.97 E-value=54 Score=31.96 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=28.0
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
-+.|+.+|+ |-+|.+++..+..+|.+|.. ++++-+
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 202 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE 202 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 357999999 55999999999899999988 444433
No 249
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=26.55 E-value=36 Score=34.09 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=26.1
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCc-EEEe-chhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRV-RVLK-DSRK 481 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~-~~~~ 481 (487)
-+.|++.|+.| +|..||.+|++-|| ++.+ +.+.
T Consensus 36 ~~~VlivG~GG-lG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKG-LGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCC
Confidence 35799999865 99999999999999 4544 5443
No 250
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=26.53 E-value=50 Score=32.17 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=27.9
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc-EEEe---chhhhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLK---DSRKFR 483 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~---~~~~~~ 483 (487)
+.|+.+|+ |-+|.+.+..+-.+|. +|.. ++++.+
T Consensus 166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 203 (343)
T 2dq4_A 166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA 203 (343)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 56999999 9999999988888999 8877 555544
No 251
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=26.52 E-value=44 Score=31.86 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=26.2
Q ss_pred CccceEEEeCCc---ch--HHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGAT---SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~---~k--~~~a~a~~lc~~~~~v~~ 477 (487)
+-.+-+|+||.. || +..+++.+|.++|.+|..
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~ 55 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTIL 55 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEE
Confidence 345778999986 77 777888889999999987
No 252
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=26.43 E-value=88 Score=31.16 Aligned_cols=92 Identities=12% Similarity=0.072 Sum_probs=65.6
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.| .+..-..|-|||+ .+|-|++|-+ |+ .-.|.
T Consensus 67 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~ 146 (309)
T 4f2g_A 67 IFQLGGHAVFMSTRDTQLGRGEPVEDSAQVISRMVDIIMIRTFEQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYY 146 (309)
T ss_dssp HHHTTCEEEEECCSSCEETBEECHHHHHHHHHHHCSEEEEECSCHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCCHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHH
Confidence 4568999999985 6677765 4455677888885 3677888754 11 12344
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+... +-..|-+.|..+-+++..+..|++-|++|.+ +.+.|+
T Consensus 147 e~~g~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 190 (309)
T 4f2g_A 147 EHRGPIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGYA 190 (309)
T ss_dssp HHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGGC
T ss_pred HHhCCCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCcccC
Confidence 44332 2345889999999999999999999999998 776664
No 253
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=26.43 E-value=77 Score=33.17 Aligned_cols=50 Identities=16% Similarity=0.354 Sum_probs=34.2
Q ss_pred CCCceEEecCCchhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEE
Q 011375 423 PNLKVRVVHGNTCTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRV 475 (487)
Q Consensus 423 p~l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v 475 (487)
|.=-+.||+|+.-+...++. -++++.|++||++ .+|++|+....++..+|
T Consensus 195 P~gvv~vv~g~~~~~~~L~~--~~~v~~V~fTGS~-~~g~~i~~~aa~~~~~v 244 (490)
T 3ju8_A 195 PAGVLNLVQGGRETGVALAA--HRGLDGLFFTGSS-RTGNLLHSQFGGQPQKI 244 (490)
T ss_dssp CTTTEEECCCSHHHHHHHHT--CTTCSEEEEESCH-HHHHHHHHHTTTCTTSE
T ss_pred CcCeEEEEeCCHHHHHHHHh--CCCcCEEEEECcH-HHHHHHHHHhhccCCCc
Confidence 44446778885433333333 3568899999976 58888988877777776
No 254
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=26.21 E-value=2.7e+02 Score=25.10 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=52.8
Q ss_pred hhHHHHHHHHHHHhhcCCeEEEecccccc--cccccC--ceeeeec-CCCCceEEec--------CCchhhHHhhhcCCC
Q 011375 380 GINKQIEDAILRADRLGVKVLSLAALNKN--ESLNGG--GTLFVDK-HPNLKVRVVH--------GNTCTAAVILNELPK 446 (487)
Q Consensus 380 ~in~~ie~ai~~a~~~g~kv~sl~~ln~~--~~ln~~--g~l~~~~-~p~l~~rvv~--------g~~l~~a~v~~~ip~ 446 (487)
.+=+-|.+.|..|.+.|+.|+-.---.+. ..+..| |.-++.. .|.-.-.|++ |+.|. ..|++ .
T Consensus 36 ~~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~~~~~~g~~g~~i~~~l~~~~~~~vi~K~~~saF~~t~L~--~~L~~--~ 111 (198)
T 3mcw_A 36 QAEQACAGLLQAWRARGLPLIHIRHDSVEPNSTYRPGQPGHAFKPEVEPRPGETVIAKQTNSAFIGTGLE--ALLRA--N 111 (198)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEEECCCCTTCTTCTTSGGGSBCGGGCCCTTCEEEEESSSSTTTTSSHH--HHHHH--H
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEEEecCCCCCCCCCcCCccccCcccCCCCCCEEEEcCccCccccchHH--HHHHc--C
Confidence 33345556666788899999865332211 112111 1111111 1111122332 23332 23333 3
Q ss_pred ccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.++|+++|-. +=-=.+.|+.+.++|++|.+
T Consensus 112 gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~v 143 (198)
T 3mcw_A 112 GWLELVVAGVSTSNSVEATVRMAGNLGFAVCL 143 (198)
T ss_dssp TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEEEcCcChHHHHHHHHHHHCCCEEEE
Confidence 78999999988 54557888999999999998
No 255
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=25.96 E-value=33 Score=34.42 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=34.6
Q ss_pred CceEEecCCchhhHHhhhcCCC---ccceEEEeCCc-chHHHH-HHHHhhccCcEEEe
Q 011375 425 LKVRVVHGNTCTAAVILNELPK---DVKEVFLTGAT-SKLGRA-IALYLCRKRVRVLK 477 (487)
Q Consensus 425 l~~rvv~g~~l~~a~v~~~ip~---~~~~v~l~g~~-~k~~~a-~a~~lc~~~~~v~~ 477 (487)
..|.++.-|. ++.+..++-+ |++-|+-.|.. +|+|.. +|+.-++.|+.|.+
T Consensus 173 I~vtli~Dsa--~~~~m~~vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V 228 (315)
T 3ecs_A 173 VPVTVVLDAA--VGYIMEKADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYV 228 (315)
T ss_dssp CCEEEECGGG--HHHHGGGCSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred CCEEEEehhH--HHHHHHhCCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEE
Confidence 4566665433 3345555554 66667777888 999976 66666678999988
No 256
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=25.94 E-value=1e+02 Score=30.69 Aligned_cols=92 Identities=13% Similarity=0.152 Sum_probs=64.8
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCCC----------ceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPNL----------KVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~l----------~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ .+..-..|-|||+- +|-|++|-+ |+ .-.|.
T Consensus 58 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~ 137 (307)
T 3tpf_A 58 ITELGGKALFLSSNDLQLSRGEPVKDTARVIGAMVDFVMMRVNKHETLLEFARYSKAPVINALSELYHPTQVLGDLFTIK 137 (307)
T ss_dssp HHHTTCEEEEECTTTCCTTTSSCHHHHHHHHHHHSSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChHHHHHHHHhCCCCEEeCCCCCcCcHHHHHHHHHHH
Confidence 4568999999974 5677765 44556778888852 677887754 11 12344
Q ss_pred hcCCC-c-cceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-D-VKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~-~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+... + -..|-+.|..+-+++..+..|.+-|++|.+ +.+.|+
T Consensus 138 e~~g~l~~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 182 (307)
T 3tpf_A 138 EWNKMQNGIAKVAFIGDSNNMCNSWLITAAILGFEISIAMPKNYK 182 (307)
T ss_dssp HTTCCGGGCCEEEEESCSSHHHHHHHHHHHHHTCEEEEECCTTCC
T ss_pred HHhCCCCCCCEEEEEcCCCccHHHHHHHHHHcCCEEEEECCCccC
Confidence 44432 2 236888999989999999999999999998 666553
No 257
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=25.94 E-value=3.2e+02 Score=24.85 Aligned_cols=31 Identities=19% Similarity=0.098 Sum_probs=27.6
Q ss_pred ccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
|+++|+++|-. +=-=.+.|.-+.++|++|.+
T Consensus 106 gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~V 137 (200)
T 1x9g_A 106 DVDNAVVFGIEGHACILQTVADLLDMNKRVFL 137 (200)
T ss_dssp TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEEEEecCcHHHHHHHHHHhCCCEEEE
Confidence 99999999988 55558889999999999998
No 258
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=25.93 E-value=94 Score=31.18 Aligned_cols=92 Identities=12% Similarity=0.151 Sum_probs=61.0
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCCC----------ceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPNL----------KVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~l----------~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++..-..|-|||.- +|-|++|-+ |+ .-.|.
T Consensus 70 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvLs~~~D~iviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~ 149 (323)
T 3gd5_A 70 MYQLGGQVIDLSPSNTQVGRGEPVRDTARVLGRYVDGLAIRTFAQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIR 149 (323)
T ss_dssp HHHTTCEEEEC----------CCHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEeCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence 4578999999973 5677764 56667788888863 566777655 11 12333
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+..+ +-..|-+.|..|-+++..+..+.+-|++|.+ +.+.|+
T Consensus 150 e~~g~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~~ 193 (323)
T 3gd5_A 150 ENFGRLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGFT 193 (323)
T ss_dssp HHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCC
T ss_pred HHhCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCccc
Confidence 33332 3346888999999999999999999999998 665553
No 259
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=25.87 E-value=97 Score=32.59 Aligned_cols=52 Identities=33% Similarity=0.379 Sum_probs=36.3
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhh-ccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLC-RKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc-~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.++. -++++-|.+||++ ++|+.|+.... ++..+|.+
T Consensus 214 P~gvv~vv~g~~~~~g~~L~~--~p~v~~I~FTGS~-~~G~~i~~~aa~~~l~pv~l 267 (500)
T 1o04_A 214 PPGVVNIVPGFGPTAGAAIAS--HEDVDKVAFTGST-EIGRVIQVAAGSSNLKRVTL 267 (500)
T ss_dssp CTTSEEECCBCTTTHHHHHHT--CTTCCEEEEESCH-HHHHHHHHHHHHTTCCEEEE
T ss_pred CcCeEEEEecCcHHHHHHHHh--CCCcCEEEEECCH-HHHHHHHHhhhhhcCceEEE
Confidence 3334778887432 2233332 3478999999986 68999998888 77888876
No 260
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=25.86 E-value=1.6e+02 Score=26.68 Aligned_cols=88 Identities=17% Similarity=0.110 Sum_probs=52.4
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEecccc-----cccccc---cCceeeeecC-CCCceEEecCCchhhHHhhhcCCCccc
Q 011375 379 TGINKQIEDAILRADRLGVKVLSLAALN-----KNESLN---GGGTLFVDKH-PNLKVRVVHGNTCTAAVILNELPKDVK 449 (487)
Q Consensus 379 ~~in~~ie~ai~~a~~~g~kv~sl~~ln-----~~~~ln---~~g~l~~~~~-p~l~~rvv~g~~l~~a~v~~~ip~~~~ 449 (487)
+.+=.-|.+.+..|.+.|+.|+-----. ...+|- ++++..+.|+ ++- ..| || ...|++ .+
T Consensus 34 ~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~g~~~~el~~~l~~~~~vi~K~~~sa----F~~-tL--~~~L~~----i~ 102 (199)
T 2b34_A 34 PEIITTSRRLIDAARILSIPTIVTEQYPKGLGHTVPTLKEGLAENTPIFDKTKFSM----CIP-PT--EDTLKK----VQ 102 (199)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEESHHHHCCBCHHHHHHSCTTCCEEEESBSSS----CCG-GG--HHHHTT----CS
T ss_pred HHHHHHHHHHHHHHHHCCCcEEEEEecCCCCCCChHHHHhhCCCCCeeeecCccCC----ccc-HH--HHHHcC----CC
Confidence 4444555666678899999998652110 011111 1113333333 221 112 32 334555 89
Q ss_pred eEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 450 EVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 450 ~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
+|+++|-. +=-=.+.|.-+.++|++|.+
T Consensus 103 ~lvi~G~~T~~CV~~Ta~da~~~Gy~V~v 131 (199)
T 2b34_A 103 NVILVGIEAHVCVLQTTYDLLERGLNVHV 131 (199)
T ss_dssp EEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred EEEEEEEecCHHHHHHHHHHHHCCCEEEE
Confidence 99999988 55558889999999999998
No 261
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=25.85 E-value=2.3e+02 Score=26.21 Aligned_cols=32 Identities=19% Similarity=0.147 Sum_probs=27.4
Q ss_pred CccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
.++++|+++|-. +=-=.+.|+-+.++|.+|.+
T Consensus 149 ~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~v 181 (226)
T 3kl2_A 149 KGVDTIVLGGFLTNCCVESTMRTGYERGFRVIT 181 (226)
T ss_dssp HTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred CCCCcEEEeccCcchHHHHHHHHHHHCCCEEEE
Confidence 389999999988 44457888899999999998
No 262
>2aeb_A Arginase 1; hydrolase, binuclear manganese cluster, boronic acid inhibit perfectly twinned crystal; HET: ABH; 1.29A {Homo sapiens} SCOP: c.42.1.1 PDB: 1wva_A* 2pha_A 2pho_A 2pll_A* 2zav_A 3dj8_A* 3f80_A* 3gmz_A 3gn0_A* 3kv2_A* 3lp4_A* 3lp7_A* 3mfv_A* 3mfw_A* 3mjl_A 3sjt_A* 3skk_A* 3tf3_A 3th7_A 3the_A* ...
Probab=25.19 E-value=1.1e+02 Score=30.22 Aligned_cols=98 Identities=15% Similarity=0.250 Sum_probs=66.8
Q ss_pred hhhhhHHHHHHHHHHHhhcCCeEEEecc-----------cccccccccCceeeeecCCCCce------EEecCCchhhHH
Q 011375 377 AQTGINKQIEDAILRADRLGVKVLSLAA-----------LNKNESLNGGGTLFVDKHPNLKV------RVVHGNTCTAAV 439 (487)
Q Consensus 377 ~~~~in~~ie~ai~~a~~~g~kv~sl~~-----------ln~~~~ln~~g~l~~~~~p~l~~------rvv~g~~l~~a~ 439 (487)
+-+..++.|++++.+.-+.|...+.||= +.+.. .+=|-+.++.|++++. ...||+.+..|.
T Consensus 72 ~~~~~~~~i~~~v~~~l~~g~~pi~lGGdHsit~~~~~a~~~~~--~~~~vI~~DAH~Dl~~~~~~~sg~~hG~~~~~a~ 149 (322)
T 2aeb_A 72 SVGKASEQLAGKVAEVKKNGRISLVLGGDHSLAIGSISGHARVH--PDLGVIWVDAHTDINTPLTTTSGNLHGQPVSFLL 149 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHHC--TTCEEEEESSSCCCCCTTTCSSCCGGGCHHHHHB
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEecCccccchHHHHHHHhhC--CCEEEEEEecCcccCCCCCCCCCccccHHHHHHH
Confidence 4567789999999999999999999872 22211 1336788899999985 367888888887
Q ss_pred -hhhcC----CC--------ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 440 -ILNEL----PK--------DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 440 -v~~~i----p~--------~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
...+. |. +.+.++..|--+- ...-..++.+.|+++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iGiR~~-~~~e~~~~~~~g~~~~~ 199 (322)
T 2aeb_A 150 KELKGKIPDVPGFSWVTPCISAKDIVYIGLRDV-DPGEHYILKTLGIKYFS 199 (322)
T ss_dssp GGGTTTSCCCTTCTTCCCCBCGGGEEEEEECCC-CHHHHHHHHHHTCEEEE
T ss_pred hccccccccccccccccccCCCCCEEEEEcCCC-CHHHHHHHHHcCCEEEE
Confidence 65422 22 3456777776542 23334455667888776
No 263
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=25.18 E-value=62 Score=32.05 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=22.8
Q ss_pred ceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
+=++|+|.. |==|.++|..|+++|++|.+
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V 164 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVIL 164 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 345677766 66788999999999999877
No 264
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=25.17 E-value=39 Score=35.35 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=26.3
Q ss_pred CCCccceEEEeCCcchHHHH-HHHHhhccCcEEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRA-IALYLCRKRVRVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a-~a~~lc~~~~~v~~ 477 (487)
+|++.|.|.+.|. ++.|.+ +|.+|.++|.+|..
T Consensus 18 ~~~~~~~v~viGi-G~sG~s~~A~~l~~~G~~V~~ 51 (494)
T 4hv4_A 18 EMRRVRHIHFVGI-GGAGMGGIAEVLANEGYQISG 51 (494)
T ss_dssp ----CCEEEEETT-TSTTHHHHHHHHHHTTCEEEE
T ss_pred hhccCCEEEEEEE-cHhhHHHHHHHHHhCCCeEEE
Confidence 3888999999997 567884 89999999999999
No 265
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=25.03 E-value=34 Score=34.65 Aligned_cols=26 Identities=31% Similarity=0.503 Sum_probs=21.5
Q ss_pred cccccchhhhhHHHHHHHHHHHhhcCCe
Q 011375 371 QYFLPFAQTGINKQIEDAILRADRLGVK 398 (487)
Q Consensus 371 ~y~~~~~~~~in~~ie~ai~~a~~~g~k 398 (487)
.|-+ ..+-|++.||+|+.+|++.|++
T Consensus 263 e~~i--~~~~i~~~I~~Al~eA~~~gI~ 288 (335)
T 4gim_A 263 QFAM--PEHTINAAIDQAVAEAEAQGVI 288 (335)
T ss_dssp GGCC--CHHHHHHHHHHHHHHHHHHTCC
T ss_pred hhcC--CHHHHHHHHHHHHHHHHHcCCc
Confidence 4555 4567999999999999999985
No 266
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=25.00 E-value=82 Score=31.88 Aligned_cols=92 Identities=13% Similarity=0.134 Sum_probs=62.1
Q ss_pred HhhcCCeEEEecc----cccccccc-------cCceeeeecCCC----------CceEEecCCc--------hh-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESLN-------GGGTLFVDKHPN----------LKVRVVHGNT--------CT-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~ln-------~~g~l~~~~~p~----------l~~rvv~g~~--------l~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+= +..-..|-|||. .+|-|++|-+ |+ .-.|.
T Consensus 92 ~~~LGg~vi~l~~~~ss~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~ 171 (340)
T 4ep1_A 92 MVQLGGHGMFLNGKEMQMGRGETVSDTAKVLSHYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIY 171 (340)
T ss_dssp HHHTTCEEEEEESCC------CCTTHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEcCcccccCCCCCCHHHHHHHHHHhCCEEEEecCChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHH
Confidence 5679999999975 66777753 455677788875 3677888755 11 12334
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+... +=..|-+.|..+-+++..+..|++-|++|.+ +.+.|+
T Consensus 172 E~~G~l~glkva~vGD~~nva~Sl~~~~~~~G~~v~~~~P~~~~ 215 (340)
T 4ep1_A 172 EETNTFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYR 215 (340)
T ss_dssp HHHSCCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTCC
T ss_pred HHhCCCCCCEEEEECCCchhHHHHHHHHHHcCCEEEEECCcccC
Confidence 33332 3346888899999999999999999999998 665553
No 267
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=24.92 E-value=35 Score=34.31 Aligned_cols=33 Identities=15% Similarity=0.358 Sum_probs=25.9
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEE-e-chhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVL-K-DSRK 481 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~-~-~~~~ 481 (487)
-+.|++.|+.+ +|.++|.+|++-||.-+ + +.+.
T Consensus 118 ~~~VlvvG~Gg-lGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGG-IGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSH-HHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCH-HHHHHHHHHHhCCCCeEEEECCCc
Confidence 45799999965 99999999999999543 3 5443
No 268
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.53 E-value=49 Score=28.29 Aligned_cols=31 Identities=19% Similarity=0.218 Sum_probs=27.0
Q ss_pred ccceEEEeCCc---chHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGAT---SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~---~k~~~a~a~~lc~~~~~v~~ 477 (487)
+-+.|-+.|++ +|.|+.+..+|-+.|.+|.-
T Consensus 3 ~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~p 36 (122)
T 3ff4_A 3 AMKKTLILGATPETNRYAYLAAERLKSHGHEFIP 36 (122)
T ss_dssp CCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEE
T ss_pred CCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEE
Confidence 34677889998 78999999999999998876
No 269
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=24.42 E-value=51 Score=32.87 Aligned_cols=83 Identities=10% Similarity=0.168 Sum_probs=49.8
Q ss_pred hhcCCeEEEecccccccccccCceeeeecCCCCceEEecCCchhhHH-----------hhhcCCCccceEEEeC-CcchH
Q 011375 393 DRLGVKVLSLAALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAV-----------ILNELPKDVKEVFLTG-ATSKL 460 (487)
Q Consensus 393 ~~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~-----------v~~~ip~~~~~v~l~g-~~~k~ 460 (487)
-+-|=+|...+ +|+=.=|+.-..+.=+|+=++-+...|+ .++...+.-+.|++.| ++|-+
T Consensus 113 ~~vGdrV~~~~--------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~g~~vlV~gag~G~v 184 (379)
T 3iup_A 113 ALMGKTVAAIG--------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNL 184 (379)
T ss_dssp TTTTCEEEECC--------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHHHTTCSCEEESSTTSHH
T ss_pred CCCCCEEEecC--------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhccCCCEEEEECCCCCHH
Confidence 35688888764 2222234433334445555665544433 2222223345688887 78999
Q ss_pred HHHHHHHhhccCcEEEe---chhhhh
Q 011375 461 GRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 461 ~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
|.+.+..+..+|.+|+. ++++-+
T Consensus 185 G~~a~q~a~~~Ga~Vi~~~~~~~~~~ 210 (379)
T 3iup_A 185 GQMLNQICLKDGIKLVNIVRKQEQAD 210 (379)
T ss_dssp HHHHHHHHHHHTCCEEEEESSHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 99999888888999887 555443
No 270
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=24.42 E-value=1.1e+02 Score=31.01 Aligned_cols=87 Identities=16% Similarity=0.118 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHhhcCCeEEEec--cccccccccc-----CceeeeecCCCCceEEecCCchhhH-HhhhcCCCccceEE
Q 011375 381 INKQIEDAILRADRLGVKVLSLA--ALNKNESLNG-----GGTLFVDKHPNLKVRVVHGNTCTAA-VILNELPKDVKEVF 452 (487)
Q Consensus 381 in~~ie~ai~~a~~~g~kv~sl~--~ln~~~~ln~-----~g~l~~~~~p~l~~rvv~g~~l~~a-~v~~~ip~~~~~v~ 452 (487)
+.+-.-+-|.+|=+.|..|+|-. .|++.++|.. |-+++--+.|. .+|..+ .-..+| .++.+|
T Consensus 104 l~~~~~~~I~~Al~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~p--------~~l~v~~g~i~~i--~~~ri~ 173 (350)
T 2g0t_A 104 LEEQIATLVKKALSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIPP--------LELDVLRGGIYRK--KIKVVG 173 (350)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSCC--------SSCCCCCSGGGGC--CSEEEE
T ss_pred CCHHHHHHHHHHHHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcCC--------Ccccccccceeee--cceEEE
Confidence 44455556667778999998853 3555555543 55555555544 122111 111222 466789
Q ss_pred EeCCc---ch--HHHHHHHHhhccCcEEEe
Q 011375 453 LTGAT---SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 453 l~g~~---~k--~~~a~a~~lc~~~~~v~~ 477 (487)
.+|.. +| +..++..+|.++|+++..
T Consensus 174 v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~ 203 (350)
T 2g0t_A 174 VFGTDCVVGKRTTAVQLWERALEKGIKAGF 203 (350)
T ss_dssp EEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred EecCCCCccCccHHHHHHHHHHhcCCeEEE
Confidence 88865 67 345556688899999876
No 271
>4eqp_A Thermonuclease; staphylococcal nuclease, hyperstable, PDTP, ionizable group, hydrolase; HET: THP; 1.35A {Staphylococcus aureus} PDB: 3ero_A* 2rbm_A* 3d8g_A* 3bdc_A* 4f8m_A* 3lx0_A* 3nqt_A* 3nk9_A* 3pmf_A* 3sr1_A* 3t13_A* 3mxp_A* 3r3o_A* 4df7_A* 3np8_A* 3nxw_A* 3oso_A* 3mz5_A* 3mhb_A* 3dhq_A* ...
Probab=24.35 E-value=27 Score=30.65 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=31.0
Q ss_pred ceEEecCCchhhHHhhhcCCCccceEEEeCC--------cchHHHHHHHHhhc--cCcEEEe----chhhhh
Q 011375 426 KVRVVHGNTCTAAVILNELPKDVKEVFLTGA--------TSKLGRAIALYLCR--KRVRVLK----DSRKFR 483 (487)
Q Consensus 426 ~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~--------~~k~~~a~a~~lc~--~~~~v~~----~~~~~~ 483 (487)
-+||+||+|++... + .....|=|.|- -++-++.-...|+. |.|+|.. .+++|.
T Consensus 14 V~~V~DGDTi~v~~--~---g~~~~VRL~gIDaPE~~q~~g~~A~~~l~~ll~~g~~V~~~~d~~~~~D~yg 80 (143)
T 4eqp_A 14 LIKAIDGDTVKLMY--K---GQPMTFRLLLVDTPEFNEKYGPEASAFTKKMVENAKKDEVEFDKGQRTDKYG 80 (143)
T ss_dssp EEEECSSSEEEEEE--T---TEEEEEEETTEECCCTTSTTHHHHHHHHHHHHHHCSCEEEECCSSCSBCTTS
T ss_pred EEEEECCCEEEEEe--C---CcEEEEEEEeecCCCcCCchHHHHHHHHHHHHhcCCeEEEEEccccccCCCC
Confidence 58999999998642 1 11223333331 25666766677775 5666664 345654
No 272
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=24.28 E-value=54 Score=34.48 Aligned_cols=35 Identities=9% Similarity=0.099 Sum_probs=28.5
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe---chhhhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK---DSRKFR 483 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~---~~~~~~ 483 (487)
.+.|.++|. |++|+.+|..|.+.|++|++ ++|+-+
T Consensus 127 ~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~ 164 (565)
T 4gx0_A 127 RGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQAL 164 (565)
T ss_dssp CSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHH
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 457888987 68999999999999999998 555443
No 273
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=24.23 E-value=55 Score=32.78 Aligned_cols=29 Identities=34% Similarity=0.439 Sum_probs=25.7
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
...|-+.|+ |.+|.|+|..|+++|.+|.+
T Consensus 29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l 57 (356)
T 3k96_A 29 KHPIAILGA-GSWGTALALVLARKGQKVRL 57 (356)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHTTTCCEEE
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCeEEE
Confidence 346888896 89999999999999999998
No 274
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=23.99 E-value=70 Score=32.05 Aligned_cols=92 Identities=12% Similarity=0.137 Sum_probs=66.4
Q ss_pred HhhcCCeEEEecc----ccccccc-------ccCceeeeecCCC----------CceEEecCCch--------h-hHHhh
Q 011375 392 ADRLGVKVLSLAA----LNKNESL-------NGGGTLFVDKHPN----------LKVRVVHGNTC--------T-AAVIL 441 (487)
Q Consensus 392 a~~~g~kv~sl~~----ln~~~~l-------n~~g~l~~~~~p~----------l~~rvv~g~~l--------~-~a~v~ 441 (487)
+.+.|..|+.|+. ++|+|.+ ++.+-..|-|||. .+|-|++|-+- + .-.|.
T Consensus 68 ~~~LGg~~i~l~~~~ss~~kgEsl~DTarvls~~~D~iviR~~~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~ 147 (321)
T 1oth_A 68 FALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVLARVYKQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQ 147 (321)
T ss_dssp HHHTTCEEEEEETTTSCBTTTBCHHHHHHHHHHHCSEEEEECSCHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHH
T ss_pred HHHcCCeEEEECCCcCcCCCCCCHHHHHHHHHHhCCEEEEeCCChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHH
Confidence 4568999999964 4577764 5667788889885 37899998751 1 12444
Q ss_pred hcCCC-ccceEEEeCCcchHHHHHHHHhhccCcEEEe-chhhhh
Q 011375 442 NELPK-DVKEVFLTGATSKLGRAIALYLCRKRVRVLK-DSRKFR 483 (487)
Q Consensus 442 ~~ip~-~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~-~~~~~~ 483 (487)
.+... +-..|-+.|..+-+++..+..|++-|++|.+ +.+.|+
T Consensus 148 e~~g~l~gl~va~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~~ 191 (321)
T 1oth_A 148 EHYSSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGYE 191 (321)
T ss_dssp HHHSCCTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCTTCC
T ss_pred HHhCCcCCcEEEEECCchhhHHHHHHHHHHcCCeEEEECCcccc
Confidence 44432 2236888999878999999999999999999 666653
No 275
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=23.98 E-value=77 Score=33.02 Aligned_cols=52 Identities=21% Similarity=0.181 Sum_probs=32.1
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.=-+.||.|+.- +.+.++. -++++.|.+||++ ++|++|+....++..+|.+
T Consensus 200 P~gvv~vv~g~~~~~~~~L~~--~p~v~~v~fTGS~-~~g~~i~~~aa~~~~~v~l 252 (485)
T 4dng_A 200 PAGVLNVMLTDVKEIGDGMLT--NPIPRLISFTGST-AVGRHIGEIAGRAFKRMAL 252 (485)
T ss_dssp CTTSEEECCCCHHHHTTHHHH--CSSCSEEEEEECH-HHHHHHHHHHHHHTCEEEE
T ss_pred CCCeEEEEeCCChhHHHHHHh--CCCCCEEEEECCc-HHHHHHHHHHhhhccchhh
Confidence 4444667777643 2222222 1367788888876 6777777777777777765
No 276
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.70 E-value=69 Score=31.17 Aligned_cols=29 Identities=17% Similarity=0.380 Sum_probs=25.7
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.+.|-+.|. |.+|+++|..|.++|.+|..
T Consensus 31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~ 59 (320)
T 4dll_A 31 ARKITFLGT-GSMGLPMARRLCEAGYALQV 59 (320)
T ss_dssp CSEEEEECC-TTTHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHhCCCeEEE
Confidence 357888886 89999999999999999998
No 277
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=23.65 E-value=56 Score=30.45 Aligned_cols=28 Identities=18% Similarity=0.032 Sum_probs=22.0
Q ss_pred eEEEeCCc-ch--HHHHHHHHhhccCcEEEe
Q 011375 450 EVFLTGAT-SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 450 ~v~l~g~~-~k--~~~a~a~~lc~~~~~v~~ 477 (487)
=+++||+. || .+-++|+..|.+|.||++
T Consensus 31 i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~ 61 (196)
T 1g5t_A 31 IIVFTGNGKGKTTAAFGTAARAVGHGKNVGV 61 (196)
T ss_dssp EEEEESSSSCHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEE
Confidence 45678888 77 566666777899999999
No 278
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=23.62 E-value=1.2e+02 Score=31.83 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=34.5
Q ss_pred CCCceEEecCCc-hhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhc--cCcEEEe
Q 011375 423 PNLKVRVVHGNT-CTAAVILNELPKDVKEVFLTGATSKLGRAIALYLCR--KRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~-l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~--~~~~v~~ 477 (487)
|.=-+.||.|+. -+...++. -++++.|.+||++ ++||+|+....+ +..+|.+
T Consensus 205 P~gvv~vv~g~~~~~g~~L~~--~p~vd~I~fTGS~-~~g~~i~~~aa~~~~l~~v~l 259 (508)
T 3r64_A 205 PAGVISTVAGAGSEIGDHFVT--HAVPKLISFTGST-PVGRRVGELAINGGPMKTVAL 259 (508)
T ss_dssp CTTTEEECCCCTTTTHHHHHH--CSSCSEEEEESCH-HHHHHHHHHHHSSSSCCEEEE
T ss_pred CcCeEEEEeCCCHHHHHHHhh--CCCccEEEEECCH-HHHHHHHHHhhcccCCCceEe
Confidence 444467788763 23333333 4578889999976 578888877766 6677765
No 279
>3m1r_A Formimidoylglutamase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: CAC; 2.20A {Bacillus subtilis}
Probab=23.58 E-value=83 Score=31.15 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=62.9
Q ss_pred cchhhhhHHHHHHHHHHHhhcCC--eEEEec-----------ccccccccccCceeeeecCCCCce----EEecCCchhh
Q 011375 375 PFAQTGINKQIEDAILRADRLGV--KVLSLA-----------ALNKNESLNGGGTLFVDKHPNLKV----RVVHGNTCTA 437 (487)
Q Consensus 375 ~~~~~~in~~ie~ai~~a~~~g~--kv~sl~-----------~ln~~~~ln~~g~l~~~~~p~l~~----rvv~g~~l~~ 437 (487)
+...+...+.|++++.+.-+.|. ..|.|| ++.+.. .+=|-+.++.|++++- +.-||+-+.-
T Consensus 97 ~~~~~~~~~~i~~~v~~~l~~g~~~~pi~lGGdHsit~~~~~al~~~~--~~~~vI~~DAH~Dl~~~~~~~~~hG~~~~~ 174 (322)
T 3m1r_A 97 VTDIVKSHHHIFQTMHALLSDHPDWVPLILGGDNSISYSTIKAIAQTK--GTTAVIQFDAHHDVRNTEDGGPTNGTPFRR 174 (322)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHCTTEEEEEEESCTTHHHHHHHHHHHHH--CSEEEEEECSSCCCCCSSCC--CTTCHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCceeEEeCCCccccHHHHHHHHHhC--CCeEEEEccCCccccCCCCCCCCCccHHHH
Confidence 34567788999999999999999 999887 333311 1235677899999976 4556665554
Q ss_pred HHhhhcCCCccceEEEeCCcch-HHHHHHHHhhccCcEEEe
Q 011375 438 AVILNELPKDVKEVFLTGATSK-LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 438 a~v~~~ip~~~~~v~l~g~~~k-~~~a~a~~lc~~~~~v~~ 477 (487)
|. .+=+-+.+.++..|--+- ....-..++-+.|+++..
T Consensus 175 ~~--~~~~~~~~~~~~iGiR~~~~~~~e~~~~~~~g~~~~~ 213 (322)
T 3m1r_A 175 LL--DEEIIEGQHLIQLGIREFSNSQAYEAYAKKHNVNIHT 213 (322)
T ss_dssp HH--HTTSSCGGGEEEEEECTTSSCHHHHHHHHHTTCEEEE
T ss_pred HH--hccCCCCceEEEEeeCCCCCCHHHHHHHHHCCCEEEE
Confidence 44 222223456666665542 233444556677888876
No 280
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=23.04 E-value=45 Score=28.27 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=24.0
Q ss_pred CccceEEEeCCc--ch--HHHHHHHHhhccCcEEEe
Q 011375 446 KDVKEVFLTGAT--SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 446 ~~~~~v~l~g~~--~k--~~~a~a~~lc~~~~~v~~ 477 (487)
+.-.-|+++|.+ || ++++|+.+.++++..+++
T Consensus 22 ~~~~~vll~G~~GtGKt~lA~~i~~~~~~~~~~~v~ 57 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVY 57 (145)
T ss_dssp TCCSCEEEESSTTSSHHHHHHHHHHSSTTTTSCCEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHhCCccCCCEEE
Confidence 344569999998 77 899999888877655434
No 281
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=22.95 E-value=1.5e+02 Score=28.05 Aligned_cols=54 Identities=19% Similarity=0.304 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhcCCeEEEeccccc-ccccccCceeeeecC--CCCceEEecCCchh
Q 011375 383 KQIEDAILRADRLGVKVLSLAALNK-NESLNGGGTLFVDKH--PNLKVRVVHGNTCT 436 (487)
Q Consensus 383 ~~ie~ai~~a~~~g~kv~sl~~ln~-~~~ln~~g~l~~~~~--p~l~~rvv~g~~l~ 436 (487)
+-|++++.+|.++||.|..+--=+. .+++.+-+..|++.. |...+=++|++...
T Consensus 36 ~~l~~~L~~A~~rGV~V~liv~~~~~~~~l~~~~~~~vr~~~~~~p~~vi~D~~e~l 92 (233)
T 2f5t_X 36 ETIREDLIKTLERGVTVSLYIDKIPDLSEFKGKGNFFVRQFYKLNHLIGMTDGKEVV 92 (233)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSCCCCGGGTTSSEEEEEECSCCCSEEEEETTTEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEEcCCcchhhhcccceEEEEEccCCCcEEEEEEchhhc
Confidence 6788999999999998877644333 456777788855333 55566677776554
No 282
>3pzl_A Agmatine ureohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.70A {Thermoplasma volcanium GSS1}
Probab=22.88 E-value=51 Score=32.75 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=60.1
Q ss_pred chhhhhHHHHHHHHHHHhhcCCeEEEec-----------ccccccccccCceeeeecCCCCceEEecCCchhhHHhhhcC
Q 011375 376 FAQTGINKQIEDAILRADRLGVKVLSLA-----------ALNKNESLNGGGTLFVDKHPNLKVRVVHGNTCTAAVILNEL 444 (487)
Q Consensus 376 ~~~~~in~~ie~ai~~a~~~g~kv~sl~-----------~ln~~~~ln~~g~l~~~~~p~l~~rvv~g~~l~~a~v~~~i 444 (487)
...+...+.|++++.+.-+.|...|.|| ++.+ +=|-+.++.|++++-- .+|+.+.-|.++..+
T Consensus 94 ~~~~~~~~~i~~~v~~~l~~g~~PivlGGdHsit~~~~~a~~~-----~l~vI~~DAH~Dl~~~-~~g~~~shgt~~~~~ 167 (313)
T 3pzl_A 94 EDVEYVIDTVESVVSAVMSDGKIPIMLGGEHSITVGAVRALPK-----DVDLVIVDAHSDFRSS-YMGNKYNHACVTRRA 167 (313)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHTTCCS-----SEEEEEECSBCCCCSC-BTTBTTSTTSHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHhcc-----CCcEEEecCccccccc-cCCCCcCcHHHHHHH
Confidence 4567889999999999999999999887 3433 3467888999999863 345554444443333
Q ss_pred CC--ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 445 PK--DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 445 p~--~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
-+ +.+.++..|--+ ....-..++-+.|+++..
T Consensus 168 ~e~~~~~~~~~iGiR~-~~~~e~~~~~~~gi~~~~ 201 (313)
T 3pzl_A 168 LDLLGEGRITSIGIRS-VSREEFEDPDFRKVSFIS 201 (313)
T ss_dssp HHHHCSSSEEEEEECB-CCHHHHTSGGGGGSEEEE
T ss_pred HhcCCCCeEEEEeCCC-CCHHHHHHHHHCCCEEEE
Confidence 21 133455555443 122333445566887765
No 283
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=22.85 E-value=1.5e+02 Score=31.59 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=49.6
Q ss_pred HhhcCCeEEEecccccccccccCceeeeecCCC-CceEE-ecCCch-------------------hhHHhhhcCCC---c
Q 011375 392 ADRLGVKVLSLAALNKNESLNGGGTLFVDKHPN-LKVRV-VHGNTC-------------------TAAVILNELPK---D 447 (487)
Q Consensus 392 a~~~g~kv~sl~~ln~~~~ln~~g~l~~~~~p~-l~~rv-v~g~~l-------------------~~a~v~~~ip~---~ 447 (487)
+++.|++.+.+--.-.++. -|+-..++.-|+ -.+++ ++|..+ .++++-...|+ .
T Consensus 294 ~~~lgi~~v~fd~~~y~~~--~g~~i~id~~~~~~~~~~~iSgt~iR~~~L~~g~~~p~~~~r~eV~~~lr~~~~~~~~~ 371 (546)
T 2gks_A 294 EDEIGIKMVPFEELVYVPE--LDQYVEINEAKKRNLKYINISGTEIRENFLKQGRKLPEWFTRPEVAEILAETYVPKHKQ 371 (546)
T ss_dssp HHHHTCEEEECCCCEEETT--TTEEECSCC---------------CTHHHHTTTCCCCTTTSCHHHHHHHHHHSCCGGGC
T ss_pred ccccCceEEeccceEEEcC--CCeEEeeeccCCCCceeeecchhhhhhhhhcCCCCCCccccchhHHHHHHHhhcccccc
Confidence 5678999998776655554 333445566675 33333 333322 33444444543 3
Q ss_pred cceEEEeCCc--ch--HHHHHHHHhhccCcEEEe-chhhh
Q 011375 448 VKEVFLTGAT--SK--LGRAIALYLCRKRVRVLK-DSRKF 482 (487)
Q Consensus 448 ~~~v~l~g~~--~k--~~~a~a~~lc~~~~~v~~-~~~~~ 482 (487)
..-|++||.. || +|++++..|..+|.++.. +.|..
T Consensus 372 ~~~I~l~G~~GsGKSTia~~La~~L~~~G~~~~~ld~D~i 411 (546)
T 2gks_A 372 GFCVWLTGLPCAGKSTIAEILATMLQARGRKVTLLDGDVV 411 (546)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEECHHHH
T ss_pred ceEEEccCCCCCCHHHHHHHHHHHhhhcCCeEEEECchHh
Confidence 4568898876 56 888899888888888766 55443
No 284
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=22.63 E-value=52 Score=33.27 Aligned_cols=33 Identities=30% Similarity=0.349 Sum_probs=26.6
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe--chhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK--DSRK 481 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~--~~~~ 481 (487)
-+.|++.|+.| +|.++|.+|++-||.-+. +.+.
T Consensus 34 ~~~VlIvGaGG-lGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGT-LGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSH-HHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCH-HHHHHHHHHHHcCCCEEEEecCCE
Confidence 46799999865 899999999999997554 5444
No 285
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=22.63 E-value=1.6e+02 Score=29.96 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=65.1
Q ss_pred HhhcCCeEEEeccc----------------cccccc-------ccCceeeeecCC----------C----------CceE
Q 011375 392 ADRLGVKVLSLAAL----------------NKNESL-------NGGGTLFVDKHP----------N----------LKVR 428 (487)
Q Consensus 392 a~~~g~kv~sl~~l----------------n~~~~l-------n~~g~l~~~~~p----------~----------l~~r 428 (487)
+.+.|..|+.|+.- .|+|.+ +++.-..|-||| + .+|=
T Consensus 80 ~~~LGg~~i~l~~~~~ss~~~s~~~~vm~~~kgEsl~DTarvLs~y~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vP 159 (359)
T 1zq6_A 80 AFQLGGHAVVLQPGKDAWPIEFNLGTVMDGDTEEHIAEVARVLGRYVDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVP 159 (359)
T ss_dssp HHHTTCEEEEECHHHHSCCEECSSSCCCCSSCCEEHHHHHHHHHHHCSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSC
T ss_pred HHHcCCeEEEeCCCcccccccccccccccCCCCCcHHHHHHHHHHhCcEEEEeccccccccccccchHHHHHHHHhCCCC
Confidence 45689999999764 677764 555667888898 2 2677
Q ss_pred EecCCc-------hh-hHHhhhcCCC---ccce--EEEeCC----cchHHHHHHHHhhccCcEEEe-chh-hhh
Q 011375 429 VVHGNT-------CT-AAVILNELPK---DVKE--VFLTGA----TSKLGRAIALYLCRKRVRVLK-DSR-KFR 483 (487)
Q Consensus 429 vv~g~~-------l~-~a~v~~~ip~---~~~~--v~l~g~----~~k~~~a~a~~lc~~~~~v~~-~~~-~~~ 483 (487)
|++|-+ |+ .-.|..+..+ +-.. |-+.|. .+-+++..+..|++-|++|.+ +.+ .|+
T Consensus 160 VINag~g~HPtQaLaDl~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~G~~v~~~~P~~~~~ 233 (359)
T 1zq6_A 160 VINMETITHPCQELAHALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYI 233 (359)
T ss_dssp EEESSSSCCHHHHHHHHHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHTTCEEEEECSSGGGC
T ss_pred EEeCCCCCCcHHHHHHHHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHcCCEEEEEcCccccC
Confidence 888766 11 2344444443 2234 678999 569999999999999999998 666 553
No 286
>3qks_C DNA double-strand break repair protein MRE11; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_C* 3qku_C*
Probab=22.60 E-value=17 Score=24.69 Aligned_cols=24 Identities=21% Similarity=0.159 Sum_probs=12.2
Q ss_pred cccccchhhhhHHHHHHHHHHHhh
Q 011375 371 QYFLPFAQTGINKQIEDAILRADR 394 (487)
Q Consensus 371 ~y~~~~~~~~in~~ie~ai~~a~~ 394 (487)
.||.|.+.+.||.+=|++|.+-|+
T Consensus 2 e~Ft~~ElKiI~l~Gek~~e~~d~ 25 (34)
T 3qks_C 2 DFFTEFELKIIDILGEKDFDDFDY 25 (34)
T ss_dssp ----CHHHHHHHHC------CHHH
T ss_pred ccccHHHHHHHHHHccchHHHHHH
Confidence 599999999999999999887664
No 287
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=22.37 E-value=52 Score=32.65 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=24.3
Q ss_pred ccceEEEe-CCc--ch--HHHHHHHHhhccCcEEEe-chh
Q 011375 447 DVKEVFLT-GAT--SK--LGRAIALYLCRKRVRVLK-DSR 480 (487)
Q Consensus 447 ~~~~v~l~-g~~--~k--~~~a~a~~lc~~~~~v~~-~~~ 480 (487)
..+.+.++ |+. || ++.++|.+|+++|.||++ +.|
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D 63 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTD 63 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34455444 444 77 778888899999999999 543
No 288
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=22.23 E-value=76 Score=31.86 Aligned_cols=28 Identities=11% Similarity=0.202 Sum_probs=25.5
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.|-+.| +|.+|+++|..|.++|.+|..
T Consensus 23 mkIgiIG-lG~mG~~~A~~L~~~G~~V~v 50 (358)
T 4e21_A 23 MQIGMIG-LGRMGADMVRRLRKGGHECVV 50 (358)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEEC-chHHHHHHHHHHHhCCCEEEE
Confidence 5678888 689999999999999999998
No 289
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=21.68 E-value=1.6e+02 Score=28.57 Aligned_cols=34 Identities=15% Similarity=0.076 Sum_probs=27.9
Q ss_pred CCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 444 LPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 444 ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+.++.+.|+.+|++|=+|.+.+..+..+|.+|+.
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~ 197 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSIS 197 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEE
Confidence 3344378999999999999998888888999876
No 290
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=21.62 E-value=70 Score=31.87 Aligned_cols=24 Identities=13% Similarity=0.044 Sum_probs=21.9
Q ss_pred eCCcchHHHHHHHHhhccCcEEEe
Q 011375 454 TGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 454 ~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
||+|-|++++||..|.+.|+.|.+
T Consensus 267 ~GnT~~la~~i~~~l~~~g~~v~~ 290 (414)
T 2q9u_A 267 YGTTHRMALALLDGARSTGCETVL 290 (414)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CchHHHHHHHHHHHHHhCCCeEEE
Confidence 599999999999999999988876
No 291
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=21.53 E-value=47 Score=32.72 Aligned_cols=36 Identities=25% Similarity=0.229 Sum_probs=26.8
Q ss_pred cceEEEeCCcchHHHHHHHHhhccCcEEEe--chhhhhh
Q 011375 448 VKEVFLTGATSKLGRAIALYLCRKRVRVLK--DSRKFRK 484 (487)
Q Consensus 448 ~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~--~~~~~~~ 484 (487)
-+.|++.|+.+ +|.++|.+|++-||.=+. +.|..+.
T Consensus 36 ~~~VlVvGaGG-lGs~va~~La~aGVG~i~lvD~D~Ve~ 73 (292)
T 3h8v_A 36 TFAVAIVGVGG-VGSVTAEMLTRCGIGKLLLFDYDKVEL 73 (292)
T ss_dssp GCEEEEECCSH-HHHHHHHHHHHHTCSEEEEECCCBC--
T ss_pred CCeEEEECcCH-HHHHHHHHHHHcCCCEEEEECCCccCh
Confidence 45899999865 999999999999985443 6555443
No 292
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=21.50 E-value=46 Score=28.83 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=39.7
Q ss_pred cCCeEEEecccccccccccCc----eeeeecCCC-CceEEecCCchhhHHhhhcCCCccceEEEeCCc--chHHH
Q 011375 395 LGVKVLSLAALNKNESLNGGG----TLFVDKHPN-LKVRVVHGNTCTAAVILNELPKDVKEVFLTGAT--SKLGR 462 (487)
Q Consensus 395 ~g~kv~sl~~ln~~~~ln~~g----~l~~~~~p~-l~~rvv~g~~l~~a~v~~~ip~~~~~v~l~g~~--~k~~~ 462 (487)
.||.|+++|--| ++--|.+. +|.++..|+ +.||+++|+ +..+.|-.+|.+| ++||+
T Consensus 11 ~gv~v~~I~d~~-~~~~~ky~~q~v~L~~~ydpqg~sv~i~~~~-----------~~~l~ef~V~~~TEc~rVGk 73 (117)
T 2oqb_A 11 PGARLLTIGDAN-GEIQRHAEQQALRLEVRAGPDAAGIALYSHE-----------DVCVFKCSVSRETECSRVGR 73 (117)
T ss_dssp EEEEEEEEECTT-SSCEEEEEEEEEEEEEEECSSEEEEEEECTT-----------CCEEEEEEEETTSEEEEETT
T ss_pred CceEEEEEeCCC-CcEeecccCceEEEEEEECCCCcEEEEEcCC-----------CeEEEEEEecCCccceeecC
Confidence 488999998755 12234444 677788876 499999987 6677788888887 66653
No 293
>4fvg_A Stomatin; mixed alpha-beta fold, membrane scaffold, membrane protein; 1.80A {Mus musculus} PDB: 4fvj_A 4fvf_A
Probab=20.97 E-value=66 Score=27.48 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=28.3
Q ss_pred eccCccccccchhhhhHHHHHHHHH-HHhhcCCeEEEecc
Q 011375 366 PRYGFQYFLPFAQTGINKQIEDAIL-RADRLGVKVLSLAA 404 (487)
Q Consensus 366 pr~~~~y~~~~~~~~in~~ie~ai~-~a~~~g~kv~sl~~ 404 (487)
.++..+-.+ .+++.||..|.+.+. .+++.|++|.+..+
T Consensus 76 g~~~ldeil-~~r~~i~~~i~~~l~~~~~~~GI~V~~V~i 114 (133)
T 4fvg_A 76 GTKNLSQIL-SDREEIAHHMQSTLDDATDDWGIKVERVEI 114 (133)
T ss_dssp HTSCHHHHH-HCHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred ccccHHHHH-hhHHHHHHHHHHHHHHHHhcCCEEEEEEEE
Confidence 334443333 267789999999988 68999999998865
No 294
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=20.92 E-value=1.4e+02 Score=31.59 Aligned_cols=51 Identities=22% Similarity=0.318 Sum_probs=37.1
Q ss_pred CCCceEEecCCc--hhhHHhhhcCCCccceEEEeCCcchHHHHHHHHhh-ccCcEEEe
Q 011375 423 PNLKVRVVHGNT--CTAAVILNELPKDVKEVFLTGATSKLGRAIALYLC-RKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~--l~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc-~~~~~v~~ 477 (487)
|.=-+.||.|.. ...+ ++ +- ++++-|.+||++ ++|+.|+.... ++..+|.+
T Consensus 234 P~gvv~vv~g~g~~~g~~-L~-~~-~~v~~V~FTGS~-~~G~~I~~~aa~~~lk~v~l 287 (517)
T 2o2p_A 234 PKGVVNILPGSGSLVGQR-LS-DH-PDVRKIGFTGST-EVGKHIMKSCALSNVKKVSL 287 (517)
T ss_dssp CTTSEEECCSCHHHHHHH-HH-HC-TTCCEEEEESCH-HHHHHHHHHHHHHTCCEEEE
T ss_pred CcCeEEEEeCCCHHHHHH-HH-hC-CCCCEEEEECCH-HHHHHHHHHhHHhcCCeEEE
Confidence 555678999864 3333 22 22 478999999985 78999998877 77788876
No 295
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=20.88 E-value=91 Score=30.40 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=25.4
Q ss_pred ceEEEeCCcchHHHHHHHHhhccC-cEEEe
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKR-VRVLK 477 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~-~~v~~ 477 (487)
+.|-+.| +|.+|.++|..|.+.| .+|..
T Consensus 25 m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~ 53 (317)
T 4ezb_A 25 TTIAFIG-FGEAAQSIAGGLGGRNAARLAA 53 (317)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCSEEEE
T ss_pred CeEEEEC-ccHHHHHHHHHHHHcCCCeEEE
Confidence 5688888 6899999999999999 99998
No 296
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=20.79 E-value=4.3e+02 Score=23.20 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=53.8
Q ss_pred hhhHHHHHHHHHHHhhcCCeEEEeccc-cc-cccc---------cc-CceeeeecCCCCceEEec--------CCchhhH
Q 011375 379 TGINKQIEDAILRADRLGVKVLSLAAL-NK-NESL---------NG-GGTLFVDKHPNLKVRVVH--------GNTCTAA 438 (487)
Q Consensus 379 ~~in~~ie~ai~~a~~~g~kv~sl~~l-n~-~~~l---------n~-~g~l~~~~~p~l~~rvv~--------g~~l~~a 438 (487)
+.+=.-|.+.+..|.+.|+.|+-.--- +. ..++ +. |+++.=.=.|.-.-.|++ |+.|.
T Consensus 25 ~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~vi~K~~~saF~~t~L~-- 102 (182)
T 3eef_A 25 MKTVGPARKVIETFRRSGLPVVYVNDSHYPDDPEIRIWGRHSMKGDDGSEVIDEIRPSAGDYVLEKHAYSGFYGTNLD-- 102 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEECBCTTSTTHHHHCSCSBTTSGGGSBCGGGCCCTTCEEEEESSSSTTTTSSHH--
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEEecccCCCChhhhhcchhhcCCCchhhhhhhhCCCCCcEEEeecccCCCCCCCHH--
Confidence 333344566666788999998876421 11 1111 11 122221111222223333 33332
Q ss_pred HhhhcCCCccceEEEeCCc-chHHHHHHHHhhccCcEEEe
Q 011375 439 VILNELPKDVKEVFLTGAT-SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 439 ~v~~~ip~~~~~v~l~g~~-~k~~~a~a~~lc~~~~~v~~ 477 (487)
..|++ .+.++|+++|-. +=-=++.|+-+.++|.+|.+
T Consensus 103 ~~L~~--~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~v 140 (182)
T 3eef_A 103 MILRA--NGIDTVVLIGLDADICVRHTAADALYRNYRIIV 140 (182)
T ss_dssp HHHHH--TTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHh--cCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEE
Confidence 33444 389999999988 44448888999999999998
No 297
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=20.70 E-value=40 Score=34.61 Aligned_cols=24 Identities=13% Similarity=-0.018 Sum_probs=22.5
Q ss_pred eCCcchHHHHHHHHhhccCcEEEe
Q 011375 454 TGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 454 ~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
+|+|-|++.+||..|.++|+++.+
T Consensus 276 yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 276 YGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cChHHHHHHHHHHHHHhcCCceEE
Confidence 799999999999999999999875
No 298
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=20.67 E-value=1.1e+02 Score=29.19 Aligned_cols=33 Identities=15% Similarity=0.290 Sum_probs=26.2
Q ss_pred CCccceEEEeCCc---ch--HHHHHHHHhhccCcEEEe
Q 011375 445 PKDVKEVFLTGAT---SK--LGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 445 p~~~~~v~l~g~~---~k--~~~a~a~~lc~~~~~v~~ 477 (487)
.++.+-|.+||.. || ++..+|.+|.++|-||++
T Consensus 79 ~~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLL 116 (271)
T 3bfv_A 79 DSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLI 116 (271)
T ss_dssp TCCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEE
Confidence 4566778888654 66 778889999999999998
No 299
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=20.67 E-value=1.3e+02 Score=29.16 Aligned_cols=34 Identities=24% Similarity=0.182 Sum_probs=27.8
Q ss_pred ceEEEeCCcchHHHHHHHHhhccCc-EEEe---chhhhh
Q 011375 449 KEVFLTGATSKLGRAIALYLCRKRV-RVLK---DSRKFR 483 (487)
Q Consensus 449 ~~v~l~g~~~k~~~a~a~~lc~~~~-~v~~---~~~~~~ 483 (487)
+.|+.+|+ |-+|.+.+..+..+|. +|.. ++++.+
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~ 206 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRE 206 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 56999999 9999999998888999 8876 444433
No 300
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=20.59 E-value=80 Score=33.45 Aligned_cols=39 Identities=26% Similarity=0.197 Sum_probs=28.9
Q ss_pred HhhhcCC--CccceEEEeCCc--chHHHHHHHHhhccCcEEEe
Q 011375 439 VILNELP--KDVKEVFLTGAT--SKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 439 ~v~~~ip--~~~~~v~l~g~~--~k~~~a~a~~lc~~~~~v~~ 477 (487)
.|.+..| ++-+=++|+|.. |==|.++|.+|+++|++|.+
T Consensus 42 ~i~~~~~~~~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v 84 (502)
T 3rss_A 42 AMEEELGNLSDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLV 84 (502)
T ss_dssp HHHHHHSCCTTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEE
T ss_pred HHHHhcCccCCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 4555566 344456778865 66788999999999999877
No 301
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=20.27 E-value=72 Score=30.12 Aligned_cols=30 Identities=7% Similarity=0.112 Sum_probs=26.3
Q ss_pred ccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 447 DVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 447 ~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
.-+.|++.|+ ||+|..-|..|.+.|.+|.+
T Consensus 30 ~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtV 59 (223)
T 3dfz_A 30 KGRSVLVVGG-GTIATRRIKGFLQEGAAITV 59 (223)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHGGGCCCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEE
Confidence 3468899996 69999999999999999988
No 302
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=20.25 E-value=1.2e+02 Score=24.68 Aligned_cols=36 Identities=14% Similarity=0.185 Sum_probs=26.2
Q ss_pred hhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 441 LNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 441 ~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
++++|++.+=|+.|.. |.-+...|..|.+.|+++.-
T Consensus 50 ~~~l~~~~~ivv~C~~-G~rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 50 LNSFNKNEIYYIVCAG-GVRSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp GGGCCTTSEEEEECSS-SSHHHHHHHHHHTTTCEEEE
T ss_pred hhhhcCCCeEEEECCC-CHHHHHHHHHHHHcCCCEEE
Confidence 5778888776777644 44455667889999998763
No 303
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=20.22 E-value=2.8e+02 Score=26.69 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=41.9
Q ss_pred eeecC-CCCceEEecCCchhhHHh-----------hh-------cCCCccceEEEeCCcchHHHHHHHHhhcc--CcEEE
Q 011375 418 FVDKH-PNLKVRVVHGNTCTAAVI-----------LN-------ELPKDVKEVFLTGATSKLGRAIALYLCRK--RVRVL 476 (487)
Q Consensus 418 ~~~~~-p~l~~rvv~g~~l~~a~v-----------~~-------~ip~~~~~v~l~g~~~k~~~a~a~~lc~~--~~~v~ 476 (487)
|+.-. .+.=+++ ++-+...|+- ++ .+ + -+.|+.+|+ |-+|.+.+..+..+ |.+|.
T Consensus 125 y~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~-g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi 200 (344)
T 2h6e_A 125 YMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-A-EPVVIVNGI-GGLAVYTIQILKALMKNITIV 200 (344)
T ss_dssp EEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-S-SCEEEEECC-SHHHHHHHHHHHHHCTTCEEE
T ss_pred eEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-C-CCEEEEECC-CHHHHHHHHHHHHhcCCCEEE
Confidence 44444 4555788 8877653321 11 34 2 357999999 89999998888888 99988
Q ss_pred e---chhhhh
Q 011375 477 K---DSRKFR 483 (487)
Q Consensus 477 ~---~~~~~~ 483 (487)
. |+++.+
T Consensus 201 ~~~~~~~~~~ 210 (344)
T 2h6e_A 201 GISRSKKHRD 210 (344)
T ss_dssp EECSCHHHHH
T ss_pred EEeCCHHHHH
Confidence 7 555544
No 304
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=20.17 E-value=1.4e+02 Score=27.94 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=49.5
Q ss_pred ccccchhhhhHHHHHHHHHHHhhcCCeE-EEecccccccccccCceeeeecCCCCceEEec--CCc---hhhHHhhhcC-
Q 011375 372 YFLPFAQTGINKQIEDAILRADRLGVKV-LSLAALNKNESLNGGGTLFVDKHPNLKVRVVH--GNT---CTAAVILNEL- 444 (487)
Q Consensus 372 y~~~~~~~~in~~ie~ai~~a~~~g~kv-~sl~~ln~~~~ln~~g~l~~~~~p~l~~rvv~--g~~---l~~a~v~~~i- 444 (487)
+.+=..--||--+ .+|+++-..+.++ +-++.-|+.+. ...+..|+++++.+. |+. -..+-.+.++
T Consensus 115 ~lliagGtGitPi--~s~l~~l~~~~~~~~~~~~~~~~d~------~~l~~~~~~~v~~~~~~~~~~~g~~~~~~l~~~~ 186 (252)
T 2gpj_A 115 FLLAGDMTALPAI--SVNLAKLPNNAVGYAVIEVLSEADI------QPLVHPEHVELHWVINPEADPEGRPLVERIAQLP 186 (252)
T ss_dssp EEEEEEGGGHHHH--HHHHHHSCTTCEEEEEEEESSGGGC------CCCCCCTEEEEEEEECSSCCTTCHHHHHHHTTSC
T ss_pred EEEEcchhhHHHH--HHHHHhCCCCCcEEEEEEECCHHHh------hcccCCCCcEEEEEeCCCCCcccHHHHHHHHhcc
Confidence 4444444455443 2333322224444 44565554432 133455677777663 211 1122234443
Q ss_pred -CCccceEEEeCCcchHHHHHHHHhh-ccCcE
Q 011375 445 -PKDVKEVFLTGATSKLGRAIALYLC-RKRVR 474 (487)
Q Consensus 445 -p~~~~~v~l~g~~~k~~~a~a~~lc-~~~~~ 474 (487)
|.+..+|++||-.+=+ +|+..+|. ++|+.
T Consensus 187 ~~~~~~~vy~CGP~~m~-~av~~~l~~~~G~~ 217 (252)
T 2gpj_A 187 WLAGEPAVWIACEFNSM-RALRRHFKQAHALP 217 (252)
T ss_dssp CCSSCEEEEEEEEHHHH-HHHHHHHHHHCCCC
T ss_pred CCCCCcEEEEEcCHHHH-HHHHHHHHHhcCCC
Confidence 4556689999987655 78887776 67763
No 305
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=20.09 E-value=1.5e+02 Score=31.39 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=36.3
Q ss_pred CCCceEEecCCch-hhHHhhhcCCCccceEEEeCCcchHHHHHHHHhhccCcEEEe
Q 011375 423 PNLKVRVVHGNTC-TAAVILNELPKDVKEVFLTGATSKLGRAIALYLCRKRVRVLK 477 (487)
Q Consensus 423 p~l~~rvv~g~~l-~~a~v~~~ip~~~~~v~l~g~~~k~~~a~a~~lc~~~~~v~~ 477 (487)
|.==+.||.|+.- +.+.++. -++++.|.+||++ ++|+.|+....++..+|.+
T Consensus 226 P~gvvnvv~g~~~~~g~~L~~--~p~vd~V~FTGS~-~vG~~i~~~aa~~l~~v~l 278 (520)
T 3ed6_A 226 PKGTINLILGAGSEVGDVMSG--HKEVDLVSFTGGI-ETGKHIMKNAANNVTNIAL 278 (520)
T ss_dssp CTTSEEECCSCCTTHHHHHHH--CTTCSEEEEESCH-HHHHHHHHHHHTTTCEEEE
T ss_pred CCCeEEEEeCCChHHHHHHHh--CCCcCEEEEECCH-HHHHHHHHHhhhcCCCEEE
Confidence 5555778887532 2222222 2578899999987 7899999888887788876
No 306
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=20.02 E-value=72 Score=26.17 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHhhcCCeEEEeccccc
Q 011375 381 INKQIEDAILRADRLGVKVLSLAALNK 407 (487)
Q Consensus 381 in~~ie~ai~~a~~~g~kv~sl~~ln~ 407 (487)
=.+.++.|+.-|++.|+++.-+-....
T Consensus 18 s~~al~~A~~la~~~~a~l~ll~v~~~ 44 (146)
T 3s3t_A 18 AQAAFTEAVNIAQRHQANLTALYVVDD 44 (146)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEecC
Confidence 356788888888888988887766554
Done!